Spo26841.1 (mRNA) | SpinachBase

Overview


Name	Spo26841.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	ADP ribosylation factor
Location	SpoScf_09925 : 1101 .. 2166 (+)
Sequence length	327

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCGTCCATTGTGGAGACATTACTTCCAAAACACCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGTGACCGTGTTGTTGAGGCCAGGGACGAGCTGCATAGAATGTTAAATGAGGTGCTGTTTATTCTCTGGCTCCCGTGGCCTTTATTTTAGCAAAGCAATTCATTTGAATAATTTTTGTGAAGTAATAATGCTGATTATATTAGTCTTTCTCACCCATTTAACTTGTACAGGATGAATTGCGGGATGCAGTATTGTTGGTGTTTGCTAACAAGCAAGATCTTCCAAATGCAATGAATGCTGCTGAGATCACCGATAAGCTTGGCCTCCATTCTCTACGTCAACGTCACTGGTACACTATGCCTCTTTGGTTTCTTCTTTCTTCAGCTGACTTGCATACCCTTCACTCTATTTTTGCTTCTTTAATTCATGTACCTTTCACTATGTTGGCAGATACTGTAATCTGTATTTACTAATCTCTTATATGCTTCTGTATTTACAGGTACATACAGAGCACATGTGCCACCTCTGGTGAAGGGCTTTACGAGGGACTGGACTGGCTTTCAAACAACATCGCTAGCAAGGTGTGTTTCAGCTTTCATTATACATGTCTCTACATATGTATGTGTGTTTGTTCAAATGTTCACTTAGTGGATAAATGTCCACCTCTTTACGCTGTGTTACATTCTGCCACTCACTTGCAATCCCTCCTGCTTCCACCCTGAAGCCGGGGGACGGATGAATGCACTAGAGTCTTTAGCTTTTGAGCCTTGAGGAATTTTCAAGCATATTGATACATTTGATGTGATTGCCTTAAAGCAAATATGTTGACTGCTTCTGTGGCTCACATTTTTTTGGGACCTATGGTATCCTGGAGTGAATTGCTTTTTTTTTTTTCTATAGATGAATTCGTGCTATTTGTTTTACAGTTCTGTATGGAAAGTTACCATCTGNTTTTTTTTTTTTCTATAGATGAATTCGTGCTATTTGTTTTACAGTTCTGTATGGAAAGTTACCATCTGTCTACTTTCTTATAATGTCCTTGTCTTTTCAGGCTTAG

mRNA sequence

ATTCGTCCATTGTGGAGACATTACTTCCAAAACACCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGTGACCGTGTTGTTGAGGCCAGGGACGAGCTGCATAGAATGTTAAATGAGGATGAATTGCGGGATGCAGTATTGTTGGTGTTTGCTAACAAGCAAGATCTTCCAAATGCAATGAATGCTGCTGAGATCACCGATAAGCTTGGCCTCCATTCTCTACGTCAACGTCACTGGTACATACAGAGCACATGTGCCACCTCTGGTGAAGGGCTTTACGAGGGACTGGACTGGCTTTCAAACAACATCGCTAGCAAGGCTTAG

Coding sequence (CDS)

ATTCGTCCATTGTGGAGACATTACTTCCAAAACACCCAAGGACTCATCTTTGTGGTTGACAGTAATGATCGTGACCGTGTTGTTGAGGCCAGGGACGAGCTGCATAGAATGTTAAATGAGGATGAATTGCGGGATGCAGTATTGTTGGTGTTTGCTAACAAGCAAGATCTTCCAAATGCAATGAATGCTGCTGAGATCACCGATAAGCTTGGCCTCCATTCTCTACGTCAACGTCACTGGTACATACAGAGCACATGTGCCACCTCTGGTGAAGGGCTTTACGAGGGACTGGACTGGCTTTCAAACAACATCGCTAGCAAGGCTTAG

Protein sequence

IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo26841	Spo26841	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo26841.1	Spo26841.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26841.1.exon.1	Spo26841.1.exon.1	exon
Spo26841.1.exon.2	Spo26841.1.exon.2	exon
Spo26841.1.exon.3	Spo26841.1.exon.3	exon
Spo26841.1.exon.4	Spo26841.1.exon.4	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26841.1.CDS.1	Spo26841.1.CDS.1	CDS
Spo26841.1.CDS.2	Spo26841.1.CDS.2	CDS
Spo26841.1.CDS.3	Spo26841.1.CDS.3	CDS
Spo26841.1.CDS.4	Spo26841.1.CDS.4	CDS

Homology

[Close]

BLAST of Spo26841.1 vs. NCBI nr
Match: gi|4324967|gb|AAD17207.1| (ADP-ribosylation factor [Glycine max])

HSP 1 Score: 225.3 bits (573), Expect = 5.000e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 71  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 130

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 131 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 178

[Close]

BLAST of Spo26841.1 vs. NCBI nr
Match: gi|470137765|ref|XP_004304633.1| (PREDICTED: ADP-ribosylation factor 1 isoform X1 [Fragaria vesca subsp. vesca])

HSP 1 Score: 225.3 bits (573), Expect = 5.000e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. NCBI nr
Match: gi|357495841|ref|XP_003618209.1| (ADP-ribosylation factor-like protein A1D [Medicago truncatula])

HSP 1 Score: 225.3 bits (573), Expect = 5.000e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. NCBI nr
Match: gi|659085648|ref|XP_008443527.1| (PREDICTED: ADP-ribosylation factor 1-like [Cucumis melo])

HSP 1 Score: 225.3 bits (573), Expect = 5.000e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. NCBI nr
Match: gi|15226521|ref|NP_182239.1| (ADP-ribosylation factor 1 [Arabidopsis thaliana])

HSP 1 Score: 225.3 bits (573), Expect = 5.000e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
Match: V4LNK6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10014797mg PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.500e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
Match: A0A0A0LD11_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G837590 PE=3 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.500e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
Match: Q9ZPJ2_SOYBN (ADP-ribosylation factor (Fragment) OS=Glycine max PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.500e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 71  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 130

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 131 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 178

[Close]

BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
Match: A0A161X5M5_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_007082 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.500e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
Match: A9P9X4_POPTR (ADP-ribosylation factor family protein OS=Populus trichocarpa GN=POPTR_0005s00910g PE=2 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 3.500e-56
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 225.3 bits (573), Expect = 3.100e-58
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 223.8 bits (569), Expect = 9.200e-58
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL+WLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLEWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 223.8 bits (569), Expect = 9.200e-58
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
Match: ARF2B_ARATH (ADP-ribosylation factor 2-B OS=Arabidopsis thaliana GN=ARF2-B PE=2 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 9.200e-58
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181

[Close]

BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
Match: ARF2A_ARATH (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=2)

HSP 1 Score: 223.8 bits (569), Expect = 9.200e-58
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181

[Close]

BLAST of Spo26841.1 vs. TAIR (Arabidopsis)
Match: AT2G47170.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 225.3 bits (573), Expect = 1.800e-59
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. TAIR (Arabidopsis)
Match: AT1G10630.1 (ADP-ribosylation factor A1F)

HSP 1 Score: 225.3 bits (573), Expect = 1.800e-59
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of Spo26841.1 vs. TAIR (Arabidopsis)
Match: AT3G62290.1 (ADP-ribosylation factor A1E)

HSP 1 Score: 224.2 bits (570), Expect = 3.900e-59
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

[Close]

BLAST of Spo26841.1 vs. TAIR (Arabidopsis)
Match: AT1G23490.1 (ADP-ribosylation factor 1)

HSP 1 Score: 223.8 bits (569), Expect = 5.200e-59
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181

[Close]

BLAST of Spo26841.1 vs. TAIR (Arabidopsis)
Match: AT1G70490.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 223.8 bits (569), Expect = 5.200e-59
Identity = 107/108 (99.07%), Postives = 107/108 (99.07%), Query Frame = 1


		  
Query: 1   IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 60
           IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA
Sbjct: 74  IRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNA 133

Query: 61  MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 109
           MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 134 MNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181

The following BLAST results are available for this feature:

BLAST of Spo26841.1 vs. NCBI nr
BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
BLAST of Spo26841.1 vs. TAIR (Arabidopsis)

BLAST of Spo26841.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|4324967\|gb\|AAD17207.1\|	5.0e-56	100.	ADP-ribosylation factor [Glyci...	[more]
gi\|470137765\|ref\|XP_004304633.1\|	5.0e-56	100.	PREDICTED: ADP-ribosylation fa...	[more]
gi\|357495841\|ref\|XP_003618209.1\|	5.0e-56	100.	ADP-ribosylation factor-like p...	[more]
gi\|659085648\|ref\|XP_008443527.1\|	5.0e-56	100.	PREDICTED: ADP-ribosylation fa...	[more]
gi\|15226521\|ref\|NP_182239.1\|	5.0e-56	100.	ADP-ribosylation factor 1 [Ara...	[more]

BLAST of Spo26841.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
V4LNK6_EUTSA	3.5e-56	100.	Uncharacterized protein OS=Eut...	[more]
A0A0A0LD11_CUCSA	3.5e-56	100.	Uncharacterized protein OS=Cuc...	[more]
Q9ZPJ2_SOYBN	3.5e-56	100.	ADP-ribosylation factor (Fragm...	[more]
A0A161X5M5_DAUCA	3.5e-56	100.	Uncharacterized protein OS=Dau...	[more]
A9P9X4_POPTR	3.5e-56	100.	ADP-ribosylation factor family...	[more]

BLAST of Spo26841.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ARF1_ARATH	3.1e-58	100.	ADP-ribosylation factor 1 OS=A...	[more]
ARF_VIGUN	9.2e-58	99.0	ADP-ribosylation factor OS=Vig...	[more]
ARF1_ORYSJ	9.2e-58	99.0	ADP-ribosylation factor 1 OS=O...	[more]
ARF2B_ARATH	9.2e-58	99.0	ADP-ribosylation factor 2-B OS...	[more]
ARF2A_ARATH	9.2e-58	99.0	ADP-ribosylation factor 2-A OS...	[more]

BLAST of Spo26841.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G47170.1	1.8e-59	100.	Ras-related small GTP-binding ...	[more]
AT1G10630.1	1.8e-59	100.	ADP-ribosylation factor A1F	[more]
AT3G62290.1	3.9e-59	99.0	ADP-ribosylation factor A1E	[more]
AT1G23490.1	5.2e-59	99.0	ADP-ribosylation factor 1	[more]
AT1G70490.1	5.2e-59	99.0	Ras-related small GTP-binding ...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 1..26 score: 1.8E-6coord: 46..67 score: 1.
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 1..104 score: 4.0
IPR024156	Small GTPase superfamily, ARF type	PROFILE	PS51417	ARF	coord: 1..104 score: 13
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..106 score: 3.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	unknown	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 2..105 score: 5.35
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 1..107 score: 1.3
None	No IPR available	PANTHER	PTHR11711:SF181	ADP-RIBOSYLATION FACTOR A1F	coord: 1..107 score: 1.3
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..108 score: 7.4

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007264	small GTPase mediated signal transduction
biological_process	GO:0006499	N-terminal protein myristoylation
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0015031	protein transport
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005829	cytosol
cellular_component	GO:0005768	endosome
cellular_component	GO:0005798	Golgi-associated vesicle
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0016004	phospholipase activator activity