Spo26846.1 (mRNA) | SpinachBase

Overview


Name	Spo26846.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Uncharacterised BCR, YbaB family COG0718
Location	SpoScf_03605 : 11423 .. 21155 (-)
Sequence length	879

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACGCTGCAACAAGTTCAGACTTGTTGCAGGCCCCCCAGTTGCAGCATACGATGTACGCTGCAACAGGGGTCTAAAAGCCCGCTGCAATAAGGGTTTTTTCTACTAGTGAAAAAGAACATATAATGGTTTGAAAAGAACAAATAACACTTAAAAAAGAACATAGTCCGATTTGTGGTAAAAGAACAAAAAATACTTTTTAAAAAAATATAGATTTAGTTTTAAGTGCATCAAAAAATCTTCGTTTCGTCTTTTTAATTAGAACATAAAATCATTTGAATAGAACAAATAACACTTAATAAAAGAACATAGTTCTGATGCGTGGGATAAGAACAAAAATACATTTAAATAAAAATATAGATCTAGTTTTAAGTACATCAAAATATCGTCGTTTTCGTCTTTTTAATTAGAACACTAAGTGGTTTGAAAAGAACAAATACAACTAATAAAAGAACATAGATTTGTTGTTCTTTTCGTCCCTTTCATTCTGTTCTTTTGTTTGATAAGGAAAAAGAAAATGTTGTTCTTTTCCATGTGTTTTGTTCTTTTTTCTTCTGTTTTGTAAAAAAGTTGTTGTTCTTTTTTTAATTATTTTGTGTTCTTTTTAACTTATTTATGTTTTTTAATATTTAATAACATTATCGATAATAATTTTTTTTTTTGTTTTTCTGTTGTATTTTTCACACGATGTTCTTTTTGAAAAATAATTGTTCTNGTTTTGTTCTTTTTTCTTCTGTTTTGTAAAAAAGTTGTTGTTCTTTTTTTAATTATTTTGTGTTCTTTTTAACTTATTTATGTTTTTTAATATTTAATAACATTATCGATAATAATTTTTTTTTTGTTTTTCTGTTGTATTTTTCACACGATGTTCTTTTTGAAAAATAATTGTTCTTTTTATAGTTTATGAGGAGAGAGAATATGTTATTTTCATTTTTGTATATTTTCTTTAGTTTTTTAGCATTAGTGTTCTTTTCAGGTTTTAGTTAATGTTCTTTTCGTTTACTTTATTATGTTCTTTCTGTTTAGTTTGTTATGTTCTTTTTCGTTTTCTTTTAATGTTTTTGCGTTTTGGTGCAGGTGCACGTAGATCTACGTGCAGGCCCCTGCACCATCCGCGCGTTGTCAATCTCACAGGATGGATCTTTGGTTTCTGGTGGATTTAAGCTTGGTCTTATGATTTGTTCCTAGAAATTCCATATACTTCGTTTTAGGGTCATTCTAGGCCTGTTTAGTCAGCCTCGTTCAGTCCTCTTGGGGACTTCATCCTCTCTTCTTCAGCAAATTCAACTGGTTTGTTCCTGATAATGCCATACATTCATCTGCATCATTCTTTCTTGAGCAGATTCAACTGATTAGATGTTGCATTTACCCCATTTTCTCTTAACTTCAATTTATGAGCTGCACTGCGGCTTTTATGAGCTTTTAGAATCCCAATTCTGTGATAGCTGTTACTATTATGGTAGTCCAAACACTGTGAATCATTCTTTTGAGTGGTATATAAATTTCGCTTCAAGTTTTGAAGTACCAATTTACCGAGACCAGGAAAATAACAACTTTTTGGAAATTAATTCCTGGTAACTCAGTTGAAGATTTAGGTGCACATAAATGCCTCCATTGTAAATCTCTAGTTTCGAATATCAGATCTTCTGGTCTTTGTGTTTTATGTTATCACGGGGCTCTCTTGAAGATTCATGGCTTTAATAAGTGTGTTCTGTTACAGTGCTTATGACCTCATTGTGCACCCTGACCTTTATGGTGGATATCTTTCTTTCACTTCACAGGTACTTTAATGATTCTCTTTCTTCTGGTCAGTAAAAGAATGTTCTTCATCCTGCTTGGATGTTTTCTTCAGTAGATCAACTCCAATACTGAAAACAAATTCATGTTTCCACATTTAGAACTTGCAGTATAGTACCTGTGCGATGTCACATAGTACTATACCAAAAATTTCCTTAATAGACAGATATTGAAGTTACTCTTAAACGGATGTTTTGTTACCTATCATGTTTATGTTTCCATTTAAGTGGTTTTTTCTTCTTCCATTTTTTGTATATTTATATCCAGTTATTGATTACTAATCATCCAATTTGAAGCAAGTTTTCAGACCAGCTAAAAGAGGTTAAGAATGGCTTGTGATTTGGTTTACCATGTCAGCCACCAGTTCAATAAACCTGCTACATAAATCCCACCCGACTCATGTTGCTCCATAACAAGCCTCAACAATGATCAAGAGATCAACATAATTTAAATTTAGCAATCTCTTGACATGATTAAAATAAAACCCATGTACTGAATCATGCCAAAATGTCCACCAGAGAAAATGCTGATAGAGTGTTAGTATGTGTCAGTTGAAAGACAAGATTTTTTAGCATTAAGCATATCTGTTTTTCCTTTCTTATCGGTCAGTTGAATCTCTCTGACACGTCCTTTAATCTCTTTAATTTCTTTGTTCAGTCAAAGACAATATACAAGGTACATTGTCTCAATTAGGAGCTGTACCTAGTTCATCAGATGCATTACAGCAACAGAGCTTTAAATGGTGGATTCAGATTACCATTTGCATAATTTTTATCCTTCTCGGGGAGTCCATAGCTTTTCTACTTGGAAGATTTTATTACAACACGGGAATCATTTTATTTTGGATAATGGAAATTGAAAATTATTGAAATTACGATGAGGATATTACAATATTCGTATTAGCTACTATTTCTTTTATGTATTCTAGTGTATGGTTTCCCTATTTATGTAATGTCAGTTAGAGATATTAGGAATGAGATAAATCAATTTATCCAACTTGAGTGTGGTCCCCCAGAGCATATCATTGATGAGATGAGCATATTAGATATTATGAAATTTCTTAGTGTGCTATGATGTGCGCTTCTTTGTGTTTTTGTGTGTGTAGTTGTGTACCCTCAGGTACTGTTATTAGTTGTGGACTTTAAACTTGTTAGGCTACTTGTTGATGAATTCTGTAATAAAAATTTAACGAGTTAGTCCTTTTCATAGCATTCTGTTGCAATATTTTTTTCCTTATTAATTTCATTTTCACCAGAATGCTATTGTACATGTTGACTCTGACTTCTTCTGAGTGACATTACTGTCATGGGTTATCTTAGGGCTTAAACATTGTGGGTCTCTAGAGTTATGATGACATGTAAATGTCACTCCATAACTGTGATTAGATGGAGTCATATGGATTTGAGGTAATAATTTGTAAAGGTTTCCACCTTGACTTCTGACTCAAACCTTCTTAGTGAATATTGTTTGTTGTTTTCTGTTAATTTGCAGTTTTCATTTCATTAAGCAGTATGTCTTATTTTTCAAACATAGTCTGCTGCTCGATCTTTGAAACTTNGTCTTATTTTTCAAACATAGTCTGCTGCTCGATCTTTGAAACTTAGTGGAAATATTTAGACGAATTTAAGGATCTGCTAGCCACCTGATTGCCCAAAGTTTCTTCCAGACACTGACTACTACTTGCTGTTCAATTTCTCAAAGTCTATCAGAGCTTTAGGAGTATCAAATTCCAGAACTGTGAGATATAGTTGGACTATTTTAAAGCAGGCTTGGACATTTTGCCTTCAATTCTTTCTGGTATTTACTACTTTATTCTTGATCATCTCTATATTATGATGCATTGAAGTATAATACGACTTGAAATTTGTCTTTTAGGAACTCTTAGTTTACCAAGAGACGAGCAACGCAAATCCTATGTTCTCTCAGAGTGCAAATTAATAAAAATTATTGATGTACTCTTACAAAAAGTGTATCACTCTAAAAAGTGTAACTTTCCCTTTTAATTGGTTTGCAGAATGCTGATAACCGNAAAGTGTATCACTCTAAAAAGTGTAACTTTCCCTTTTAATTGGTTTGCAGAATGCTGATAACCGAAGCCTAGTAGATCTGAAACCAAAATTTCTTTATGAGTCTGCAGACAAGTCGAAGATCTGGAAGCTCACTGAAATTAATAAATCTTTAGTGCCGGTCACTAAGACTTCCTGATATTATATCATCTATGAGGGTAGGTCTTTGGTGTTCTTTCCATATGGTATCCTTTTCTAGTTCTAATGTCTGGATTAATCTTGTTTGGACAATATTGGTCATTTGTTACTATTCTTTGGACTTAATAATTGTCTAAGAGCTTCTTGTCTGCTATTAGCAGTTACTTCTGCTTCTGTTTGTATCTGGTTGCTTTGTGTTGGAGTTTTCACTTAAGCTGCATTGTTTCAACGAAAAACACTTGCAATGGAAAATTAATTAGCTGTTTATGAGTTGGCCCTAGTTTTAGATAATAGATGCTAGTTTTGTTTATGAGATAGCCCTAGTTGCAAGCTTTGACATGACGCTAGATTTTGATTTACTGTTTATTGGTTCTGCTTAGANTCTTTTTATAGTTTATGAGGAGAGAGAATATGTTATTTTCATTTTTGTATATTTTCTTTAGTTTTTTAGCATTAGTGTTCTTTTCAGGTTTTAGTTAATGTTCTTTTCGTTTACTTTATTATGTTTTTTCTGTTTAGTTTGTTATGTTCTTTTTCGTTTTCTTTTAATGTTTTTGCGTTTTGGTACAGGTGCACGTAGATCTACGTACAGGCCCCTGCACCATCCGCGCGTTGCTTCCTCTATAGCGTTTACACCATCCGCGCGTTGGGAGTGTACGGGACATTTATGAACACCCCTTCGATAAAGATATTTCATTCAAAAGGGTTTATCTTCTCTTACACTCTCACACACTCAACTGTTTCTCTCTCCTTCTTCCATGGCGTGTACAAGCACCCTCCTTAGCGCATCAAAACTTCCAATTCATTGCAGAATCAATGACACCTTCAAAAATCCCACCTCTTCTTCTATCTCCTTCTCCTTCTGTAAGCTCTCTTTTCCTCTCTCCTTTATCTCCTGTTTTATGCTCTATTTTAGTGTCTCTTCATCGTTTATTATTGGTTCTTCTCCTTCATTTTGTTGTTGTGCGTCGAATTATTACGTGAACTGACTTTCTCTTTCTTATCTAATTGAATTTGGTAATTGGTTTATCATGATATTGGGGTATTGTGATTTTGGGTTTTATTAGTATTTTATTTTATTTAGGGTTTATCAGTGATGTAATTGCCCTAATTGGCTTATATTGATTGAATTATTATCTATAAACCATTATCATTTGAAAGATCCCACCATTTACTTAATAGGAATTTTTTTCTTTACTGGATTATGTAGCTGTTGAATTCTTAAGGATGTTATGACCATGTTAATTAGCTAGCTTGTGGCGAAGCGGTCAATTCTATTAGGGTACTCCCATTCTTTTTGCCCCCCCACCCCTCCCCCCTTAATGTCTTAGATACTCAGGTTTGAGCACTCTGTGAGACCCAGTTGTCAGACTCGTCTTTCTAATGAAATTTTAGGAATTTACCATTTTATGATCCAAATTGTCAAGTCACTAATGTTCATTATCCAATGTTACTCAGGGTCGAATATTGGTATGGGACACGGATAAATGTCAGACTTGGCTATCTAATGGAAATTTGCCATTGTCAACTCACAATTGTTCATCATTCGAGTTACTTGGGGAGTTAGTTCTTAGAGTGTCGTTCCGTGTAGCGGTGTTGAGGTACTTGCTGCATAGGATAGGCTCACCGTGGTTCAAAAAAATCCATGGTATTAAAAGCTTTAAAAACAAATAAATCTACGAAGATAAAGGTAGGTACAAAAACTTAATAAGTGTATGTTCTACTGCTTATTGTATGTCTAGTGGTTGTCTGACATTTGAAAGGTCAAAGGAACTTGTTGTATAATCAAGAAAAACACAATTCGGACCTTATTAGCACTTATTAGATGTTTATTTCTCCTGAATTCTCCAACTAGCTTTACAGGCCATAGATCAGAGCCATTGATGACAAATTGATATTGCATTTCTGCTAGATTTAGTGTTCCCAAGTTGTAATGAAGTCGACAACATAAATAAATGGGATAACCATGGACCAGTATGTAGAAAGATCATGCTACCATTATGGCTTCTTTTAGTCCATAATTTTAGAATGAAAAATGAGGTATTCTTAAGCGAATGAAATGAGTGAATATCCCTCTCTGTTTTTCTTTCTTGCTGGAATGGATCATCCTGATATTGACTTCAAGGTCAATGAGCGGAAACCAATAATTTTTGGTGAGCCCATTCTGGCTTGGCTGCATGCCACTATCTACGGCGTGGGCCATCTGAGAAGCCAGCATTTACAAGTTTAAGTTTATTCGAATTAGGGAGGAAATTGATATCCCAACAGGCTAGCTCGTGTTCTGATCACCCTAACCTCATGTACCTCTTGGTCCCTGGAAAGCATGAACTACTTGAGTTCCAGTCTTCCAGATTTATGCTTTAAAGAATAAAAAGAAAGTGCATAGCTCCATGTTATTCAAACAAATACGATTTTGGTTAGGAGAAGAAGGGAAAAAAAACTACTTTATGGTTGATATTTGGTGCTCTGCAGGATCTCTGCAATATGCAAACTTAGTGATTCTCTCACAATCATATTCTTCTCTGAATTTATATGTTAATATAATGTCGTTAAATTTTAGAAAAGTTCACTCCCCGGTACTTTTTTTTTTCTGTTATCATTGCTCACAAAACAGAGTACTTTCAAGGGAAAAAGTTTATAAGTAGTTGCCTGTGATACAAGTGCCTCAACCTGTTCGGCTGTTCCTGATGTATGTTAAAAAATCTCAAAAAAGAAGTCCATTATGGTTTAGGAACTCAGTCAATAATGTATTGGTTCGTTACAGATTGGCGTTTGAAGATACCCTTATATGTCAATCATGCCTGAGGAAAGAATCTATGCACTAATTGTGCACTTTTGCTATGATTTTCCTGGACCACAGATGATGTATGCCCTGGGACCATATTAGAGGTCTCACTCAGTAGTATGCAGTCAAATTCTGATAAAGAGTTTGAGATTTTCAGTTTGCATTTCTCTTTTGCAGTGGTTTGAATTGGTGTTTGGAGGGAATTGGGCAATAACTGAAATTTGTGACTTATGGGGAAATTGCATATGATGGGCCTGACAGTTAATTTATGTTATCTAGTGTGTTTTTATCCTTACAAAGCACTAGTTTGATTATGTTTAAATGTTTTAATGCATCCCTGAAGTGTTGTATTCCATGTGCCGTGCTTAATTGTCATGTAATCTAATCATTTCCATAAATGTTCACAGGCAAGTTAAATAATTCCGTTGGTCGTCCACGTTTGTTGTGGACAAACAGCAAGCCTGGTAAAAACACAAGATCAGTACGTGTTTATGGTTTATTTGGAGGGAAAAAGGATGACAAGGGTGATGACTCAAAAGTGAGAGTTCTCTTACCTTCTTATAATAATGCTCATGTTAAAGCAAATCTTCATTCTTTGTAGCTATTGTAATACACTTTTGCATTAAAAAAAGGTGCCTTCCTGTGGGTATGTAAGATTGTAAAAATTTCGAAGACTATTTGTGAGCTTGCCTCTTATCTATAGTGTTCCTGCCTTTGGCATGTTTCTATTTGGCCAAAGTAGAGCTCTCAGATAAAGTTAACAATAGCAGGGGAAGTTGTGAGATACTGTCCTAAGTCTCCTGATCATTGTAGAGCATATTGTCTTCTATGATTCAGGGATCAAACTCACCATTTGTATTCAGGTCAATCACCGAAGCCACCATCAAGTCCTCACTTTTGCTTCCTAGATTGAGAGGGTTCTTCGTATTCCTTTGATATGCAACTCACATTAACAGTTATGTCCTGGGTCACCTTCCTTTTTTATTGAATCAGACCCTCAGCAACAGATAGCTTCCGTCTAACCTTCTTATAGGAACCAACCTTTTATTTCTAATTAAGTCTTCAAGTGCCTCCTCATTACTTCCAAAGTGTGAATGTGATGCAGCTCTTCTGGAAAGGGCGTCACCTTCCTTTTTTATTGAATCAGACCCTCAGCAACAGATAGCTTCCGTCTAACCTTCTTATAGGATCCAACCTTTTATTTCTAATTAAGTCTTCAAGTGCCTCCTCATTACTTCCCAAGTGTGAATGTGATGCAGCCCTTCTGGAAAGGGCCTCCACATTGTTTGGGTCTAGCTTTTGGGTCAAAGAGAAGACTGTGGAATTGTAGATGCTTCCGCAAACATACCCAATTTAGTTTTACATGCTGCAGAACTTATATTCAGAAAAGTTACCTTCGTTGTTAGCCTTACACTTTGTTTGGCTAGCATTTGTGGAAGGGAAGGGAGGGAAAAAGAGGTAAGAGAAAGGGATGTGAGGGGAGGGGAGGGGAGGGAAAAAATGATCTTCCATTTTCCTTCCAAACCTTTCCAACAATGGAAGGATCTGATTTATTGAAAGGGGAAGGAAAGTGGATCCCTCCATATCTCCAATCCTTTTCGCTTCCTTCCCCTAATCCCTTGTATCTTATCCAAATAAGGGAAAATGTCCTTTTCACTTTCCCTTCCCTCCCTTCCCTGCAAATTTTCCTAACCAAACATAGTGTTGGTGTGAAAAGCAAAAGCTTTTAATATCCTAACTGATACGAGGAATTTCCTTCTTTTTTTAGTAGCTTTTTAAATGGAAAGACTTCATCAGGACTTAGAAATGTACCCAAAAAATATCATCCTCAAAATTGGATTTAAAATTTTAAATGGAACGATATAAGAGATAAAATTGTTCTTTATTCCTGACTGAATTCAAGTTCCAACAGGAAATAGTCTCCGAAAAACATGCTAAAGAAGATTGCCAAAAAAAATGACAAGAACTCAATTTCAGGGGTGGAGGAGGATATGAATAACCTGGAATTCTAGGAGTGATAACCAGCTTCTAATATGACAAACAGTTTATTGACACAGGTTTTGGTCTTTTGGCCTATTTTTTTCCTTTCTAGAGTAGTGACTAGTGAGTTTGTCAAAAACATGTTTGTTACTTGAGATTGAAGAATTTTGTGCATTACATAATTTTGCTGATTTATTCACCTCCCTTCGTCTTTGTGGACTGTAGGATAAAAATTTATTCATTCAGAGTAGGAGTTTTCTTAGATAGTGTGGCGTTGTACATGCCCACGATATATTTATTGTCGAGTTTCTACTAAACTTACCTTCTTGAATACATAGGCTGGAATACTTGGCAACATGCAAAATTTGTATGAGACGGTCAAGAAGGCTCAAATGGTAGTCCAAGTTGAAGCAGTTAAAGTGCAAAAAGAGCTGGCAGCGTATGTGCTAATTTCTAACAATGTTTGAGTTGAATATTGATTTCATGTAAAGTGTTTCTTTTGTTATTGTTTTGGTCTTGCAGAGCAGAGTTTGATGGTTATTGTGAAGATGAGCTCATAAAGGTATGTTGTTTTTCATAATGTTGCGCAACCTCTCTATTTGAACTAGCTTCTTATCAACAAGCTTTTCATGTGATTGCTGTGTGTATCATTGTCACTGAAACATATGTATGTTATTTTATCTCTGGACCTTTAAATAAGGCAACATCTTCATTATTCAAACGTCTCTTTATCAGGTTACCCTCTCTGGTAATCAACAACCTGTCCGGACTGAGATTACTGAAGCTGCAATGAAACTTGGGGCTGAAGTGAGCTTTAGATAATTCTGTGTGTTTTTCTTCCAACTAATGTCTGTCATACGCTTGTTCCCTTCCTGAACAACTGCTTTATCTTTCACGCAGAAACTCTCTCTTTTAGTTACCGAGGCATACAAAGATGCACACCAAAAAAGCGTGCTGGTGAGATGA

mRNA sequence

ATGTACGCTGCAACAAGTTCAGACTTGTTGCAGGCCCCCCAGTTGCAGCATACGATCCTCGTTCAGTCCTCTTGGGGACTTCATCCTCTCTTCTTCAGCAAATTCAACTGTGCTTATGACCTCATTGTGCACCCTGACCTTTATGGTGGATATCTTTCTTTCACTTCACAGGCTTGGACATTTTGCCTTCAATTCTTTCTGAATGCTGATAACCGAAGCCTAGTAGATCTGAAACCAAAATTTCTTTATGAGTCTGCAGACAAGTCGAAGATCTGGAAGCTCACTGAAATTAATAAATCTTTAGTGCCGGGTTTATCTTCTCTTACACTCTCACACACTCAACTGTTTCTCTCTCCTTCTTCCATGGCGTGTACAAGCACCCTCCTTAGCGCATCAAAACTTCCAATTCATTGCAGAATCAATGACACCTTCAAAAATCCCACCTCTTCTTCTATCTCCTTCTCCTTCTGCAAGTTAAATAATTCCGTTGGTCGTCCACGTTTGTTGTGGACAAACAGCAAGCCTGGTAAAAACACAAGATCAGTACGTGTTTATGGTTTATTTGGAGGGAAAAAGGATGACAAGGGTGATGACTCAAAAGCTGGAATACTTGGCAACATGCAAAATTTGTATGAGACGGTCAAGAAGGCTCAAATGGTAGTCCAAGTTGAAGCAGTTAAAGTGCAAAAAGAGCTGGCAGCAGCAGAGTTTGATGGTTATTGTGAAGATGAGCTCATAAAGGTTACCCTCTCTGGTAATCAACAACCTGTCCGGACTGAGATTACTGAAGCTGCAATGAAACTTGGGGCTGAAAAACTCTCTCTTTTAGTTACCGAGGCATACAAAGATGCACACCAAAAAAGCGTGCTGGTGAGATGA

Coding sequence (CDS)

ATGTACGCTGCAACAAGTTCAGACTTGTTGCAGGCCCCCCAGTTGCAGCATACGATCCTCGTTCAGTCCTCTTGGGGACTTCATCCTCTCTTCTTCAGCAAATTCAACTGTGCTTATGACCTCATTGTGCACCCTGACCTTTATGGTGGATATCTTTCTTTCACTTCACAGGCTTGGACATTTTGCCTTCAATTCTTTCTGAATGCTGATAACCGAAGCCTAGTAGATCTGAAACCAAAATTTCTTTATGAGTCTGCAGACAAGTCGAAGATCTGGAAGCTCACTGAAATTAATAAATCTTTAGTGCCGGGTTTATCTTCTCTTACACTCTCACACACTCAACTGTTTCTCTCTCCTTCTTCCATGGCGTGTACAAGCACCCTCCTTAGCGCATCAAAACTTCCAATTCATTGCAGAATCAATGACACCTTCAAAAATCCCACCTCTTCTTCTATCTCCTTCTCCTTCTGCAAGTTAAATAATTCCGTTGGTCGTCCACGTTTGTTGTGGACAAACAGCAAGCCTGGTAAAAACACAAGATCAGTACGTGTTTATGGTTTATTTGGAGGGAAAAAGGATGACAAGGGTGATGACTCAAAAGCTGGAATACTTGGCAACATGCAAAATTTGTATGAGACGGTCAAGAAGGCTCAAATGGTAGTCCAAGTTGAAGCAGTTAAAGTGCAAAAAGAGCTGGCAGCAGCAGAGTTTGATGGTTATTGTGAAGATGAGCTCATAAAGGTTACCCTCTCTGGTAATCAACAACCTGTCCGGACTGAGATTACTGAAGCTGCAATGAAACTTGGGGCTGAAAAACTCTCTCTTTTAGTTACCGAGGCATACAAAGATGCACACCAAAAAAGCGTGCTGGTGAGATGA

Protein sequence

MYAATSSDLLQAPQLQHTILVQSSWGLHPLFFSKFNCAYDLIVHPDLYGGYLSFTSQAWTFCLQFFLNADNRSLVDLKPKFLYESADKSKIWKLTEINKSLVPGLSSLTLSHTQLFLSPSSMACTSTLLSASKLPIHCRINDTFKNPTSSSISFSFCKLNNSVGRPRLLWTNSKPGKNTRSVRVYGLFGGKKDDKGDDSKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYCEDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAYKDAHQKSVLVR

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo26846	Spo26846	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo26846.1	Spo26846.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26846.1.CDS.11	Spo26846.1.CDS.11	CDS
Spo26846.1.CDS.10	Spo26846.1.CDS.10	CDS
Spo26846.1.CDS.9	Spo26846.1.CDS.9	CDS
Spo26846.1.CDS.8	Spo26846.1.CDS.8	CDS
Spo26846.1.CDS.7	Spo26846.1.CDS.7	CDS
Spo26846.1.CDS.6	Spo26846.1.CDS.6	CDS
Spo26846.1.CDS.5	Spo26846.1.CDS.5	CDS
Spo26846.1.CDS.4	Spo26846.1.CDS.4	CDS
Spo26846.1.CDS.3	Spo26846.1.CDS.3	CDS
Spo26846.1.CDS.2	Spo26846.1.CDS.2	CDS
Spo26846.1.CDS.1	Spo26846.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26846.1.exon.11	Spo26846.1.exon.11	exon
Spo26846.1.exon.10	Spo26846.1.exon.10	exon
Spo26846.1.exon.9	Spo26846.1.exon.9	exon
Spo26846.1.exon.8	Spo26846.1.exon.8	exon
Spo26846.1.exon.7	Spo26846.1.exon.7	exon
Spo26846.1.exon.6	Spo26846.1.exon.6	exon
Spo26846.1.exon.5	Spo26846.1.exon.5	exon
Spo26846.1.exon.4	Spo26846.1.exon.4	exon
Spo26846.1.exon.3	Spo26846.1.exon.3	exon
Spo26846.1.exon.2	Spo26846.1.exon.2	exon
Spo26846.1.exon.1	Spo26846.1.exon.1	exon

Homology

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BLAST of Spo26846.1 vs. NCBI nr
Match: gi|902192619|gb|KNA12089.1| (hypothetical protein SOVF_129180 [Spinacia oleracea])

HSP 1 Score: 327.8 bits (839), Expect = 1.900e-86
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


		  
Query: 122 MACTSTLLSASKLPIHCRINDTFKNPTSSSISFSFCKLNNSVGRPRLLWTNSKPGKNTRS 181
           MACTSTLLSASKLPIHCRINDTFKNPTSSSISFSFCKLNNSVGRPRLLWTNSKPGKNTRS
Sbjct: 1   MACTSTLLSASKLPIHCRINDTFKNPTSSSISFSFCKLNNSVGRPRLLWTNSKPGKNTRS 60

Query: 182 VRVYGLFGGKKDDKGDDSKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYC 241
           VRVYGLFGGKKDDKGDDSKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYC
Sbjct: 61  VRVYGLFGGKKDDKGDDSKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYC 120

Query: 242 EDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAYKDAHQKSVL 291
           EDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAYKDAHQKSVL
Sbjct: 121 EDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAYKDAHQKSVL 169

[Close]

BLAST of Spo26846.1 vs. NCBI nr
Match: gi|731320451|ref|XP_010670813.1| (PREDICTED: uncharacterized protein LOC104887773 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 266.5 bits (680), Expect = 5.300e-68
Identity = 146/174 (83.91%), Postives = 157/174 (90.23%), Query Frame = 1


		  
Query: 122 MACTSTLLSASKLPIHCRINDTFKNPTSSSISFSFCKLN---NSVGRPRLLWTNSKPGKN 181
           MA TST LS SKLPI+ +INDTFKNP++SS S SFCKLN   NS+G P L+WTNSKPG++
Sbjct: 1   MASTSTTLSTSKLPIYSKINDTFKNPSTSS-SISFCKLNHLANSIGHPCLMWTNSKPGRS 60

Query: 182 TRSVRVYGLFGGKKD-DKGDD--SKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAAA 241
           +RSVR+Y LFGGKKD DKGDD  SKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELA A
Sbjct: 61  SRSVRIYALFGGKKDSDKGDDSSSKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAVA 120

Query: 242 EFDGYCEDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAYKDAHQKSV 290
           EFDGYCE ELIKVTLSGNQQPVRTEITEAAM+LGAEKLSLLVTEAYKDAHQKSV
Sbjct: 121 EFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSV 173

[Close]

BLAST of Spo26846.1 vs. NCBI nr
Match: gi|568840106|ref|XP_006474012.1| (PREDICTED: nucleoid-associated protein At2g24020, chloroplastic [Citrus sinensis])

HSP 1 Score: 204.1 bits (518), Expect = 3.200e-49
Identity = 118/153 (77.12%), Postives = 129/153 (84.31%), Query Frame = 1


		  
Query: 144 FKNPTSSSISFSFCKLNNSVGRPRLLWTNS--KPGKNTRSVRVYGLFGGKKD--DKGDD- 203
           +K PTSSS   +   LN+++    +L  +S  K G   RS+RVYGLFGGKKD  +KGDD 
Sbjct: 16  WKKPTSSSNFSNNLNLNSNLAGKEMLSFSSQQKSGHQFRSLRVYGLFGGKKDNNEKGDDA 75

Query: 204 -SKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYCEDELIKVTLSGNQQPV 263
            SKAGILGNMQNLYETVKKAQMVVQVEAV+VQKELAAAEFDGYCE ELIKVTLSGNQQPV
Sbjct: 76  PSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPV 135

Query: 264 RTEITEAAMKLGAEKLSLLVTEAYKDAHQKSVL 291
           RTEITEAAM+LGAEKLSLLVTEAYKDAHQKSVL
Sbjct: 136 RTEITEAAMELGAEKLSLLVTEAYKDAHQKSVL 168

[Close]

BLAST of Spo26846.1 vs. NCBI nr
Match: gi|747040451|ref|XP_011081920.1| (PREDICTED: uncharacterized protein LOC105164802 [Sesamum indicum])

HSP 1 Score: 202.6 bits (514), Expect = 9.400e-49
Identity = 114/147 (77.55%), Postives = 123/147 (83.67%), Query Frame = 1


		  
Query: 150 SSISFSFCKL---NNSVGRPRLLWTNSKPGKNTRSVRVYGLFGGKKD--DKGDD--SKAG 209
           SS SFS CK+    N VG P L W  ++ G   RS+RV+ LFGGKKD  DK DD  SKAG
Sbjct: 15  SSSSFSSCKILQNANLVGTPNLSWQGNRIGSVRRSLRVHALFGGKKDGNDKSDDGSSKAG 74

Query: 210 ILGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYCEDELIKVTLSGNQQPVRTEIT 269
           ILGNMQNLYETVKKAQMVVQVEAV+VQKELAAAEFDGYCEDELIK TLSGNQQPVR EIT
Sbjct: 75  ILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEDELIKATLSGNQQPVRIEIT 134

Query: 270 EAAMKLGAEKLSLLVTEAYKDAHQKSV 290
           EAAM+LGAE+LSLLVTEAYKDAH+KSV
Sbjct: 135 EAAMELGAERLSLLVTEAYKDAHKKSV 161

[Close]

BLAST of Spo26846.1 vs. NCBI nr
Match: gi|720030574|ref|XP_010265558.1| (PREDICTED: uncharacterized protein LOC104603261 [Nelumbo nucifera])

HSP 1 Score: 202.2 bits (513), Expect = 1.200e-48
Identity = 124/176 (70.45%), Postives = 137/176 (77.84%), Query Frame = 1


		  
Query: 122 MACTSTLLSASKLPIHCRINDTFKNPTSSSISFSFCKLNNS----VGRPRLLWTNSKPGK 181
           MA T+ L +A    +HC +ND  +NP+ SSISF  C   NS    VG P L W   +   
Sbjct: 1   MASTNAL-TAQFTNLHC-LNDR-RNPSCSSISF--CNRLNSNAIPVGLPSLSWPRRRSRH 60

Query: 182 NTRSVRVYGLFGGKKD--DKGDD--SKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELA 241
             + + VY LFGGKKD  +K +D  SKAGILGNMQNLYETVKKAQMVVQVEAV+VQKELA
Sbjct: 61  IQKPLHVYSLFGGKKDNNEKSEDAPSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELA 120

Query: 242 AAEFDGYCEDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAYKDAHQKSV 290
           AAEFDGYCEDELIKVTLSGNQQPVRTEITEAAM+LGAEKLSLLVTEAYKDAHQKSV
Sbjct: 121 AAEFDGYCEDELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSV 171

[Close]

BLAST of Spo26846.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QXT3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_129180 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.400e-86
Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 1


		  
Query: 122 MACTSTLLSASKLPIHCRINDTFKNPTSSSISFSFCKLNNSVGRPRLLWTNSKPGKNTRS 181
           MACTSTLLSASKLPIHCRINDTFKNPTSSSISFSFCKLNNSVGRPRLLWTNSKPGKNTRS
Sbjct: 1   MACTSTLLSASKLPIHCRINDTFKNPTSSSISFSFCKLNNSVGRPRLLWTNSKPGKNTRS 60

Query: 182 VRVYGLFGGKKDDKGDDSKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYC 241
           VRVYGLFGGKKDDKGDDSKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYC
Sbjct: 61  VRVYGLFGGKKDDKGDDSKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYC 120

Query: 242 EDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAYKDAHQKSVL 291
           EDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAYKDAHQKSVL
Sbjct: 121 EDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAYKDAHQKSVL 169

[Close]

BLAST of Spo26846.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CXU2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_2g044040 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 3.700e-68
Identity = 146/174 (83.91%), Postives = 157/174 (90.23%), Query Frame = 1


		  
Query: 122 MACTSTLLSASKLPIHCRINDTFKNPTSSSISFSFCKLN---NSVGRPRLLWTNSKPGKN 181
           MA TST LS SKLPI+ +INDTFKNP++SS S SFCKLN   NS+G P L+WTNSKPG++
Sbjct: 1   MASTSTTLSTSKLPIYSKINDTFKNPSTSS-SISFCKLNHLANSIGHPCLMWTNSKPGRS 60

Query: 182 TRSVRVYGLFGGKKD-DKGDD--SKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAAA 241
           +RSVR+Y LFGGKKD DKGDD  SKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELA A
Sbjct: 61  SRSVRIYALFGGKKDSDKGDDSSSKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAVA 120

Query: 242 EFDGYCEDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAYKDAHQKSV 290
           EFDGYCE ELIKVTLSGNQQPVRTEITEAAM+LGAEKLSLLVTEAYKDAHQKSV
Sbjct: 121 EFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSV 173

[Close]

BLAST of Spo26846.1 vs. UniProtKB/TrEMBL
Match: A0A067F7L8_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029494mg PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.300e-49
Identity = 118/153 (77.12%), Postives = 129/153 (84.31%), Query Frame = 1


		  
Query: 144 FKNPTSSSISFSFCKLNNSVGRPRLLWTNS--KPGKNTRSVRVYGLFGGKKD--DKGDD- 203
           +K PTSSS   +   LN+++    +L  +S  K G   RS+RVYGLFGGKKD  +KGDD 
Sbjct: 16  WKKPTSSSNFSNNLNLNSNLAGKEMLSFSSQQKSGHQFRSLRVYGLFGGKKDNNEKGDDA 75

Query: 204 -SKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYCEDELIKVTLSGNQQPV 263
            SKAGILGNMQNLYETVKKAQMVVQVEAV+VQKELAAAEFDGYCE ELIKVTLSGNQQPV
Sbjct: 76  PSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAAAEFDGYCEGELIKVTLSGNQQPV 135

Query: 264 RTEITEAAMKLGAEKLSLLVTEAYKDAHQKSVL 291
           RTEITEAAM+LGAEKLSLLVTEAYKDAHQKSVL
Sbjct: 136 RTEITEAAMELGAEKLSLLVTEAYKDAHQKSVL 168

[Close]

BLAST of Spo26846.1 vs. UniProtKB/TrEMBL
Match: D7U1C3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_11s0037g00330 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 2.500e-48
Identity = 121/174 (69.54%), Postives = 134/174 (77.01%), Query Frame = 1


		  
Query: 122 MACTSTLLSASKLPIHCRINDTFKNPTSSSISFSFCKLNNSVGRPRLL--WTNSKPGKNT 181
           MA TS L   +++   C   D  KN TSSS+ F     N ++   R+   + +S+ G N 
Sbjct: 1   MASTSAL--TTQISNLCGFTDC-KNTTSSSLFFCKLSPNTNLVSTRMFCQYADSRMGNNR 60

Query: 182 RSVRVYGLFGGKKD--DKGDD--SKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAAA 241
           RSVRVYGLFGG K+  +KGDD  SKAG LGNMQNLYETVKKAQMVVQVEAVKVQKELA A
Sbjct: 61  RSVRVYGLFGGNKENSEKGDDARSKAGFLGNMQNLYETVKKAQMVVQVEAVKVQKELAEA 120

Query: 242 EFDGYCEDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAYKDAHQKSV 290
           EFDGYCE ELIKVTLSGNQQPVRTEITEAAM+LG EKLSLLVTEAYKDAHQKSV
Sbjct: 121 EFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGPEKLSLLVTEAYKDAHQKSV 171

[Close]

BLAST of Spo26846.1 vs. UniProtKB/TrEMBL
Match: V4WJA1_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10009489mg PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.600e-47
Identity = 124/176 (70.45%), Postives = 136/176 (77.27%), Query Frame = 1


		  
Query: 121 SMACTSTLLSASKLPIHCRINDTFKNPTSSSISFSFCKLNNSVGRPRLLWTNS--KPGKN 180
           SMA TS   +A    IH      +K P SSS   +   LN+++    +L  +S  K G  
Sbjct: 16  SMASTSAF-TAQISSIH------WKKPISSSNFSNNLNLNSNLAGKEMLSFSSQQKSGHQ 75

Query: 181 TRSVRVYGLFGGKKD--DKGDD--SKAGILGNMQNLYETVKKAQMVVQVEAVKVQKELAA 240
            RS+RV GLFGGKKD  +KGDD  SKAGILGNMQNLYETVKKAQMVVQVEAV+VQKELAA
Sbjct: 76  FRSLRVCGLFGGKKDNNEKGDDAPSKAGILGNMQNLYETVKKAQMVVQVEAVRVQKELAA 135

Query: 241 AEFDGYCEDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAYKDAHQKSVL 291
           AEFDGYCE ELIKVTLSGNQQPVRTEITEAAM+LGAEKLSLLVTEAYKDAHQKSVL
Sbjct: 136 AEFDGYCEGELIKVTLSGNQQPVRTEITEAAMELGAEKLSLLVTEAYKDAHQKSVL 184

[Close]

BLAST of Spo26846.1 vs. ExPASy Swiss-Prot
Match: EBFC1_ARATH (Nucleoid-associated protein At4g30620, chloroplastic OS=Arabidopsis thaliana GN=At4g30620 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 4.400e-46
Identity = 101/129 (78.29%), Postives = 113/129 (87.60%), Query Frame = 1


		  
Query: 165 RPRLLWTNSKP-GKNTRSVRVYGLFGG-KKDDKGD-DSKAGILGNMQNLYETVKKAQMVV 224
           R  ++W N K  G N RS+RV GLFGG KKD+K D  SKAGILGNMQNLYETVKKAQMVV
Sbjct: 29  RQNIVWLNRKQSGNNNRSLRVNGLFGGGKKDNKEDGQSKAGILGNMQNLYETVKKAQMVV 88

Query: 225 QVEAVKVQKELAAAEFDGYCEDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAY 284
           QVEAV+VQKELA AEFDGYC+ EL+KVTLSGNQQP+RT+IT+AAM+LG+EKLSLLVTEAY
Sbjct: 89  QVEAVRVQKELAVAEFDGYCQGELVKVTLSGNQQPIRTDITDAAMELGSEKLSLLVTEAY 148

Query: 285 KDAHQKSVL 291
           KDAH KSVL
Sbjct: 149 KDAHSKSVL 157

[Close]

BLAST of Spo26846.1 vs. ExPASy Swiss-Prot
Match: EBFC2_ARATH (Nucleoid-associated protein At2g24020, chloroplastic OS=Arabidopsis thaliana GN=At2g24020 PE=2 SV=2)

HSP 1 Score: 174.9 bits (442), Expect = 1.300e-42
Identity = 99/141 (70.21%), Postives = 111/141 (78.72%), Query Frame = 1


		  
Query: 154 FSFCKLNNSVGRPRLLWTNSKPGKNT-RSVRVYGLFGG-KKDDKGDD--SKAGILGNMQN 213
           FS    N S+   R  W      KN  RS+RV GLFGG  KD+  +D  SKAGI GNMQN
Sbjct: 18  FSHVSGNASLNSQRRTWPKQYKSKNGYRSLRVNGLFGGGNKDNNSEDGQSKAGIFGNMQN 77

Query: 214 LYETVKKAQMVVQVEAVKVQKELAAAEFDGYCEDELIKVTLSGNQQPVRTEITEAAMKLG 273
           +YETVKKAQMVVQVEAV+VQKELAAAEFDGYC  EL+KVTLSGNQQP+RT+ITEAAM+LG
Sbjct: 78  MYETVKKAQMVVQVEAVRVQKELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAAMELG 137

Query: 274 AEKLSLLVTEAYKDAHQKSVL 291
           +EKLS LVTEAYKDAH KSV+
Sbjct: 138 SEKLSQLVTEAYKDAHAKSVV 158

[Close]

BLAST of Spo26846.1 vs. ExPASy Swiss-Prot
Match: Y1054_SYNP6 (Nucleoid-associated protein syc1054_d OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=syc1054_d PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.000e-10
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 1


		  
Query: 204 LGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYCEDELIKVTLSGNQQPVRTEITE 263
           LG M+ L +  KKAQ V Q  A +VQ++L   E +G  +  L+KV +SGNQ+P+R EI  
Sbjct: 10  LGKMKELADAFKKAQQV-QEGAKQVQEDLNNMEIEGQAQGGLVKVWVSGNQEPLRAEIAP 69

Query: 264 AAMKLGAEKLSLLVTEAYKDAHQKS 289
            A+  GAE LS LV  A KDA+QKS
Sbjct: 70  EALNEGAEVLSELVAAAMKDAYQKS 93

[Close]

BLAST of Spo26846.1 vs. ExPASy Swiss-Prot
Match: Y464_SYNE7 (Nucleoid-associated protein Synpcc7942_0464 OS=Synechococcus elongatus (strain PCC 7942) GN=Synpcc7942_0464 PE=3 SV=2)

HSP 1 Score: 68.9 bits (167), Expect = 1.000e-10
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 1


		  
Query: 204 LGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYCEDELIKVTLSGNQQPVRTEITE 263
           LG M+ L +  KKAQ V Q  A +VQ++L   E +G  +  L+KV +SGNQ+P+R EI  
Sbjct: 10  LGKMKELADAFKKAQQV-QEGAKQVQEDLNNMEIEGQAQGGLVKVWVSGNQEPLRAEIAP 69

Query: 264 AAMKLGAEKLSLLVTEAYKDAHQKS 289
            A+  GAE LS LV  A KDA+QKS
Sbjct: 70  EALNEGAEVLSELVAAAMKDAYQKS 93

[Close]

BLAST of Spo26846.1 vs. ExPASy Swiss-Prot
Match: Y2554_CYAP8 (Nucleoid-associated protein PCC8801_2554 OS=Cyanothece sp. (strain PCC 8801) GN=PCC8801_2554 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.600e-10
Identity = 38/85 (44.71%), Postives = 56/85 (65.88%), Query Frame = 1


		  
Query: 204 LGNMQNLYETVKKAQMVVQVEAVKVQKELAAAEFDGYCEDELIKVTLSGNQQPVRTEITE 263
           LG ++ L E   KAQ V Q  A ++Q+EL   E +G+ E +L+KV +SGNQ+P    I  
Sbjct: 11  LGKIKELQEAFAKAQQV-QAGAQQLQQELEQMEIEGFSEGKLVKVIMSGNQEPRSVTILP 70

Query: 264 AAMKLGAEKLSLLVTEAYKDAHQKS 289
            A++ GA++LS LVT+A KDA+ +S
Sbjct: 71  EALEKGADELSQLVTDAMKDAYTQS 94

[Close]

BLAST of Spo26846.1 vs. TAIR (Arabidopsis)
Match: AT4G30620.1 (Uncharacterised BCR, YbaB family COG0718)

HSP 1 Score: 186.4 bits (472), Expect = 2.500e-47
Identity = 101/129 (78.29%), Postives = 113/129 (87.60%), Query Frame = 1


		  
Query: 165 RPRLLWTNSKP-GKNTRSVRVYGLFGG-KKDDKGD-DSKAGILGNMQNLYETVKKAQMVV 224
           R  ++W N K  G N RS+RV GLFGG KKD+K D  SKAGILGNMQNLYETVKKAQMVV
Sbjct: 29  RQNIVWLNRKQSGNNNRSLRVNGLFGGGKKDNKEDGQSKAGILGNMQNLYETVKKAQMVV 88

Query: 225 QVEAVKVQKELAAAEFDGYCEDELIKVTLSGNQQPVRTEITEAAMKLGAEKLSLLVTEAY 284
           QVEAV+VQKELA AEFDGYC+ EL+KVTLSGNQQP+RT+IT+AAM+LG+EKLSLLVTEAY
Sbjct: 89  QVEAVRVQKELAVAEFDGYCQGELVKVTLSGNQQPIRTDITDAAMELGSEKLSLLVTEAY 148

Query: 285 KDAHQKSVL 291
           KDAH KSVL
Sbjct: 149 KDAHSKSVL 157

[Close]

BLAST of Spo26846.1 vs. TAIR (Arabidopsis)
Match: AT2G24020.1 (Uncharacterised BCR, YbaB family COG0718)

HSP 1 Score: 174.9 bits (442), Expect = 7.400e-44
Identity = 99/141 (70.21%), Postives = 111/141 (78.72%), Query Frame = 1


		  
Query: 154 FSFCKLNNSVGRPRLLWTNSKPGKNT-RSVRVYGLFGG-KKDDKGDD--SKAGILGNMQN 213
           FS    N S+   R  W      KN  RS+RV GLFGG  KD+  +D  SKAGI GNMQN
Sbjct: 18  FSHVSGNASLNSQRRTWPKQYKSKNGYRSLRVNGLFGGGNKDNNSEDGQSKAGIFGNMQN 77

Query: 214 LYETVKKAQMVVQVEAVKVQKELAAAEFDGYCEDELIKVTLSGNQQPVRTEITEAAMKLG 273
           +YETVKKAQMVVQVEAV+VQKELAAAEFDGYC  EL+KVTLSGNQQP+RT+ITEAAM+LG
Sbjct: 78  MYETVKKAQMVVQVEAVRVQKELAAAEFDGYCAGELVKVTLSGNQQPIRTDITEAAMELG 137

Query: 274 AEKLSLLVTEAYKDAHQKSVL 291
           +EKLS LVTEAYKDAH KSV+
Sbjct: 138 SEKLSQLVTEAYKDAHAKSVV 158

The following BLAST results are available for this feature:

BLAST of Spo26846.1 vs. NCBI nr
BLAST of Spo26846.1 vs. UniProtKB/TrEMBL
BLAST of Spo26846.1 vs. ExPASy Swiss-Prot
BLAST of Spo26846.1 vs. TAIR (Arabidopsis)

BLAST of Spo26846.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902192619\|gb\|KNA12089.1\|	1.9e-86	100.	hypothetical protein SOVF_1291...	[more]
gi\|731320451\|ref\|XP_010670813.1\|	5.3e-68	83.9	PREDICTED: uncharacterized pro...	[more]
gi\|568840106\|ref\|XP_006474012.1\|	3.2e-49	77.1	PREDICTED: nucleoid-associated...	[more]
gi\|747040451\|ref\|XP_011081920.1\|	9.4e-49	77.5	PREDICTED: uncharacterized pro...	[more]
gi\|720030574\|ref\|XP_010265558.1\|	1.2e-48	70.4	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo26846.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9QXT3_SPIOL	1.4e-86	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CXU2_BETVU	3.7e-68	83.9	Uncharacterized protein OS=Bet...	[more]
A0A067F7L8_CITSI	2.3e-49	77.1	Uncharacterized protein OS=Cit...	[more]
D7U1C3_VITVI	2.5e-48	69.5	Putative uncharacterized prote...	[more]
V4WJA1_9ROSI	1.6e-47	70.4	Uncharacterized protein OS=Cit...	[more]

BLAST of Spo26846.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
EBFC1_ARATH	4.4e-46	78.2	Nucleoid-associated protein At...	[more]
EBFC2_ARATH	1.3e-42	70.2	Nucleoid-associated protein At...	[more]
Y1054_SYNP6	1.0e-10	49.4	Nucleoid-associated protein sy...	[more]
Y464_SYNE7	1.0e-10	49.4	Nucleoid-associated protein Sy...	[more]
Y2554_CYAP8	6.6e-10	44.7	Nucleoid-associated protein PC...	[more]

BLAST of Spo26846.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2


Match Name	E-value	Identity	Description
AT4G30620.1	2.5e-47	78.2	Uncharacterised BCR, YbaB fami...	[more]
AT2G24020.1	7.4e-44	70.2	Uncharacterised BCR, YbaB fami...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004401	Nucleoid-associated protein YbaB/EbfC family	GENE3D	3.30.1310.10		coord: 205..288 score: 7.0
IPR004401	Nucleoid-associated protein YbaB/EbfC family	PFAM	PF02575	YbaB_DNA_bd	coord: 215..288 score: 1.7
IPR004401	Nucleoid-associated protein YbaB/EbfC family	unknown	SSF82607	YbaB-like	coord: 216..288 score: 8.89
None	No IPR available	PANTHER	PTHR33449	FAMILY NOT NAMED	coord: 123..289 score: 1.1