Spo26986.1 (mRNA) | SpinachBase

Overview


Name	Spo26986.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Prefoldin subunit 4
Location	SpoScf_01707 : 94250 .. 97329 (+)
Sequence length	932

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTCATTCGGGTATGGATTTAACCGATTATACTGTCAAACCTTCTCTTCCTAGTTTCTACCATTTCCATCTCGCCAAACTCTCTCCCACTCCAACTTTCGCATAAAATCTCTCGACTTTCTTCATCAAACATGCAGCAGGTTAATCCTCTCTCTGAATTCCATTCTCATTTTAAGTTCTCCAATTTTTTGTGTCTGATATTTTTTTCCTGAAATTTTGCCTTTCAGGGTACAGGATCAGATACCCAGGTCACTTGGGAAGATCAGCAGAACATCAACAAGTTCAGTAAACTTAATAATCGATTTCATGAGCTTATTGATGAGATTAAATTCGCCAAGGTGTTTTTCTCTCTCTCATTGAGCGCTGCTTCTTTGTTGTTTTTTTTTCTAATATTTTGTGTTAATTTTAGATTTGGTTTTTAAATTTTGGGAAGAATTTTAACTGGGTATTGTTTATTTGATTCGATTAATGGCGTTCATGTTTATAATTCCTTATTAATGATTGGTTGTTTAGTTTCATGGTAGTATAATTGAGGTCTTCTGGGTTCATTGAAGTTGGGGAACTTGGATGTTGATGTAGGGTTTGTGAAATTAGGCTCTGTTGTTATGTGTAGTTAACACTTTGAAGAATTGAAGTTCTAGAGGTAGTGGCTGATTGAAATATTACAATTTAAGAAATAAGAACTATTATGGAAATTTAAAATTTTGGCTTGTCATGAGTTTCGAAGTTGGAATAAGGGCGGGATAAATTTTGTGGAACAAAAGGTCTGAACTTCTGAGGACGGAAGCATAAATTTCTCTATTTTGTATATTTTCTGAGGTTATGCTCTTAGGATGATGATATTGAGCTAGATTTTTTTAAAACAATGATTTTTGATGTATATGGATCGATAAATTGGGACAAGGTCGTATTGTAGTTTACCTTGAGATTGAAGTTTAAGCCAGTTGCTATTGACTTGGAGGATTCTTCCGATGTGAACATAGCCACCGAGCCCACCGTTTAAACATATAACTTGAGATTGTGTATCTCCCAGGGCCTATTTGCTTAATTTTGCTGCTAAAACTACAAGAGAACAGTTTGTGTTGCTCATATGATTTGATGGATGAAAAATAGGACACCCTACATTGTCCATATAACATGATAGATGAGAAATACTGCCATTTTGGGGTTATCCGTCCGACAAACATTCTGTTTCTAGAAGGATGTGTTTTCCGTCCAGTTCTTTTAAAGAATTCATTTGTGACGTAACTGAAAACTTAGCAGTCTCTGTTGTACAAAGTATTTACCCGTCTCATTTTCGGAGGCAGGCTCGCCTGTAGTTTTGCTTCGTAGCTGTTGAACTATGATCTGAGTGTTCATTAACACTATGTTTGGGTAAGAGGAATTGGAGAGACAGGGGAGGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAGGGGGAGAAGTTCTCTTGTTTGGAAAAGGGGTTGGGGAAGGAAGGGGAGGGAGGGAGGGGCTGAGGGATCCATTTTCCCTTCACACTAAACCTTCAAAATTGAAGAGATTTGGTGGGGCAATGGAGCTCCACCTTCCCCCTCCCCTCTCTGTCGCTTCTATCTTGCTATCCAAACATAGTGTAAGTGTTTCTGGTGTTTCTGTTTCAGATGTGTTTGACAAATTGACAATATTTCATGTAAGTAAATGGACTGTGAAGGTTTATTGAAGTTAATAGTAAGCATTCTTCTTGTGTTATTCTGTCATTTTGTTTCTTTCGACTCCGTAGGTGGGGCAGTTGATGAGGTGTTGATACCAATTTACTGCTTTCAATTCCTAAGATAATAATAATTGCAAAGCCAAGATTCTTTATTAGACCAAATTAACTTTCCTCCTGCCCCACCTTGCTATTAGTTGAACTGTTAAGGTGGGAAATACTATAAATTTTCAACAGCACTCGCTAAATTTATATTGACCAATGTTCTTGTTTTCAATGGCATCTACATCATGTTTACAGTTTACCTATTGTGAGTGAGTGAGTGTGACTTCGATTTTGCGTTGGCCTTTGGTTGGGTTGAGGGGTGGGGATGGGGTATTTGAAATTTCATTCCCAAACGAAAAGTGCCTTCATTCCCGGCTTTCCCTAACTTAATGGCAGCTTTAGAAGTAGAGTATTAACTATTACCTGATGGCTAACTGGGTTACCAGCGGAAAGTTTTATTGAAGCTCAAAGGGGATGCCCCAATCCAACCTGAATGTGGACAGTGTTTGATTATATAATATGAGAAGTCCATTGCATTTTATGTCTCTGATTTTGTTTTCTAGTTGACTGTAATTTATTTTCTCCATCATGATTACATATGTTAGGTTCCTCGCCTTAATGGAATTTTCTGATTTACCTTCCTCTGTGCTCTCACTCTTGTCAGGATAAATGTGAGAATTTAGAGGACGCAGGCAACGAGCTTATCTTGACTGATGAGGAGATGGTACGCTTTCAAATAGGGGAAGTATTTGCTCATGTGCCAAAGGATGAAGTAGAAACTCGGCTAGAAGAGATGAAAGAACTGACGGAAAAGAATTTGGAGAAGCTCGAAGAAGAGAAGGTATCTATAGTCGCGCAGATGTCTGACTTGAAGAAGATCCTGTATGGCAAGTTTGGGGACTCTATCAATCTAGAGGAGGAGTAAGAGATTATTGACCTTTTTCTCCCCCCTCCTAGGATTATCAGCCTCTTTCAAACTCCAAGCTATTGATCGGTATTCTCTGAACGGGGCAGTTATTTGTGAAGGCTATACCTTTTCATTGTAAACATTTGCTGCATTCTTCCCAGGATTTTAGAGCATACGTTTGTTTTCTGGGATTTGTAGATTCTACTGATCTTCGCCATAATATTCTAATGTTCTCTTTTACGACAATTGCTTATTTGGTGATTAACTCTCGTTTTCTGTAGAAAAAAACGAGGAAGATCATCTGATGTTCTTTTTTTCTTTCTGCTGTTTATTATCAGTTTCCCTTTGATCTGATTATGTTGCCTCACAAGAAATCTTAGGAACCTGATTCGATTCAGATGTAAGCAAATGAACAAATACACAACAGTAAGAAATTTCG

mRNA sequence

GTTCATTCGGGTATGGATTTAACCGATTATACTGTCAAACCTTCTCTTCCTAGTTTCTACCATTTCCATCTCGCCAAACTCTCTCCCACTCCAACTTTCGCATAAAATCTCTCGACTTTCTTCATCAAACATGCAGCAGGGTACAGGATCAGATACCCAGGTCACTTGGGAAGATCAGCAGAACATCAACAAGTTCAGTAAACTTAATAATCGATTTCATGAGCTTATTGATGAGATTAAATTCGCCAAGGATAAATGTGAGAATTTAGAGGACGCAGGCAACGAGCTTATCTTGACTGATGAGGAGATGGTACGCTTTCAAATAGGGGAAGTATTTGCTCATGTGCCAAAGGATGAAGTAGAAACTCGGCTAGAAGAGATGAAAGAACTGACGGAAAAGAATTTGGAGAAGCTCGAAGAAGAGAAGGTATCTATAGTCGCGCAGATGTCTGACTTGAAGAAGATCCTGTATGGCAAGTTTGGGGACTCTATCAATCTAGAGGAGGAGTAAGAGATTATTGACCTTTTTCTCCCCCCTCCTAGGATTATCAGCCTCTTTCAAACTCCAAGCTATTGATCGGTATTCTCTGAACGGGGCAGTTATTTGTGAAGGCTATACCTTTTCATTGTAAACATTTGCTGCATTCTTCCCAGGATTTTAGAGCATACGTTTGTTTTCTGGGATTTGTAGATTCTACTGATCTTCGCCATAATATTCTAATGTTCTCTTTTACGACAATTGCTTATTTGGTGATTAACTCTCGTTTTCTGTAGAAAAAAACGAGGAAGATCATCTGATGTTCTTTTTTTCTTTCTGCTGTTTATTATCAGTTTCCCTTTGATCTGATTATGTTGCCTCACAAGAAATCTTAGGAACCTGATTCGATTCAGATGTAAGCAAATGAACAAATACACAACAGTAAGAAATTTCG

Coding sequence (CDS)

ATGCAGCAGGGTACAGGATCAGATACCCAGGTCACTTGGGAAGATCAGCAGAACATCAACAAGTTCAGTAAACTTAATAATCGATTTCATGAGCTTATTGATGAGATTAAATTCGCCAAGGATAAATGTGAGAATTTAGAGGACGCAGGCAACGAGCTTATCTTGACTGATGAGGAGATGGTACGCTTTCAAATAGGGGAAGTATTTGCTCATGTGCCAAAGGATGAAGTAGAAACTCGGCTAGAAGAGATGAAAGAACTGACGGAAAAGAATTTGGAGAAGCTCGAAGAAGAGAAGGTATCTATAGTCGCGCAGATGTCTGACTTGAAGAAGATCCTGTATGGCAAGTTTGGGGACTCTATCAATCTAGAGGAGGAGTAA

Protein sequence

MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEMVRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDSINLEEE

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo26986	Spo26986	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo26986.1	Spo26986.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26986.1.exon.1	Spo26986.1.exon.1	exon
Spo26986.1.exon.2	Spo26986.1.exon.2	exon
Spo26986.1.exon.3	Spo26986.1.exon.3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26986.1.utr5p.1	Spo26986.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26986.1.CDS.1	Spo26986.1.CDS.1	CDS
Spo26986.1.CDS.2	Spo26986.1.CDS.2	CDS
Spo26986.1.CDS.3	Spo26986.1.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo26986.1.utr3p.1	Spo26986.1.utr3p.1	three_prime_UTR

Homology

[Close]

BLAST of Spo26986.1 vs. NCBI nr
Match: gi|902220334|gb|KNA18580.1| (hypothetical protein SOVF_069420 [Spinacia oleracea])

HSP 1 Score: 242.7 bits (618), Expect = 3.500e-61
Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM 60
           MQQGTGS+TQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM
Sbjct: 1   MQQGTGSETQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM 60

Query: 61  VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS 120
           VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS
Sbjct: 61  VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS 120

Query: 121 INLEEE 127
           INLEEE
Sbjct: 121 INLEEE 126

[Close]

BLAST of Spo26986.1 vs. NCBI nr
Match: gi|731328072|ref|XP_010674850.1| (PREDICTED: probable prefoldin subunit 4 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 220.3 bits (560), Expect = 1.900e-54
Identity = 113/126 (89.68%), Postives = 120/126 (95.24%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM 60
           MQQG+GS+TQVTWEDQQNINKFSKLNNRFHEL DEIKFAKDKCENLEDAGNELIL+DE++
Sbjct: 1   MQQGSGSETQVTWEDQQNINKFSKLNNRFHELEDEIKFAKDKCENLEDAGNELILSDEDV 60

Query: 61  VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS 120
           VRFQIGEVFAHVP +EVETRLEEMKE T KNLEKLEEEKVSIV+QM  LKKILYGKFGDS
Sbjct: 61  VRFQIGEVFAHVPTEEVETRLEEMKEATAKNLEKLEEEKVSIVSQMDALKKILYGKFGDS 120

Query: 121 INLEEE 127
           INLEEE
Sbjct: 121 INLEEE 126

[Close]

BLAST of Spo26986.1 vs. NCBI nr
Match: gi|595830826|ref|XP_007206144.1| (hypothetical protein PRUPE_ppa013376mg [Prunus persica])

HSP 1 Score: 202.6 bits (514), Expect = 4.100e-49
Identity = 103/126 (81.75%), Postives = 117/126 (92.86%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM 60
           MQQG GS+T+VTWEDQQNINKF +LNNRFHEL DEIKFAK+  ENLEDA NELILTDEE+
Sbjct: 1   MQQGGGSETEVTWEDQQNINKFGRLNNRFHELQDEIKFAKESNENLEDASNELILTDEEV 60

Query: 61  VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS 120
           VRFQIGEVFAHVPK+EVE+R+EEMKE+T KNLEKLEEEK SI+AQM++LK+ILYGKF DS
Sbjct: 61  VRFQIGEVFAHVPKEEVESRIEEMKEVTSKNLEKLEEEKESILAQMAELKQILYGKFKDS 120

Query: 121 INLEEE 127
           INLEE+
Sbjct: 121 INLEED 126

[Close]

BLAST of Spo26986.1 vs. NCBI nr
Match: gi|802758496|ref|XP_012089276.1| (PREDICTED: probable prefoldin subunit 4 isoform X1 [Jatropha curcas])

HSP 1 Score: 202.6 bits (514), Expect = 4.100e-49
Identity = 103/126 (81.75%), Postives = 116/126 (92.06%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM 60
           MQQG GS+ +VTWEDQQNINKF +LNNRFHEL DEIK AK+  ENLEDA NELILTDEE+
Sbjct: 1   MQQGGGSEMEVTWEDQQNINKFGRLNNRFHELEDEIKIAKETNENLEDASNELILTDEEV 60

Query: 61  VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS 120
           VRFQIGEVFAHVPK+EVETR+EEMKE+T KNLEKLEEEK S++AQM++LKKILYGKFGDS
Sbjct: 61  VRFQIGEVFAHVPKEEVETRIEEMKEVTSKNLEKLEEEKDSLLAQMAELKKILYGKFGDS 120

Query: 121 INLEEE 127
           INLEE+
Sbjct: 121 INLEED 126

[Close]

BLAST of Spo26986.1 vs. NCBI nr
Match: gi|645222685|ref|XP_008218277.1| (PREDICTED: probable prefoldin subunit 4 [Prunus mume])

HSP 1 Score: 201.8 bits (512), Expect = 6.900e-49
Identity = 103/126 (81.75%), Postives = 116/126 (92.06%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM 60
           MQQG GS+T+VTWEDQQNINKF +LNNRFHEL DEIKFAK+  ENLEDA NELILTDEE+
Sbjct: 1   MQQGGGSETEVTWEDQQNINKFGRLNNRFHELEDEIKFAKESNENLEDASNELILTDEEV 60

Query: 61  VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS 120
           VRFQIGEVFAHVPK+EVE+R+EEMKE T KNLEKLEEEK SI+AQM++LK+ILYGKF DS
Sbjct: 61  VRFQIGEVFAHVPKEEVESRIEEMKEATSKNLEKLEEEKESILAQMAELKQILYGKFKDS 120

Query: 121 INLEEE 127
           INLEE+
Sbjct: 121 INLEED 126

[Close]

BLAST of Spo26986.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RGH7_SPIOL (Prefoldin subunit 4 OS=Spinacia oleracea GN=SOVF_069420 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 2.500e-61
Identity = 125/126 (99.21%), Postives = 126/126 (100.00%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM 60
           MQQGTGS+TQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM
Sbjct: 1   MQQGTGSETQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM 60

Query: 61  VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS 120
           VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS
Sbjct: 61  VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS 120

Query: 121 INLEEE 127
           INLEEE
Sbjct: 121 INLEEE 126

[Close]

BLAST of Spo26986.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CNL3_BETVU (Prefoldin subunit 4 OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g082190 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.300e-54
Identity = 113/126 (89.68%), Postives = 120/126 (95.24%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM 60
           MQQG+GS+TQVTWEDQQNINKFSKLNNRFHEL DEIKFAKDKCENLEDAGNELIL+DE++
Sbjct: 1   MQQGSGSETQVTWEDQQNINKFSKLNNRFHELEDEIKFAKDKCENLEDAGNELILSDEDV 60

Query: 61  VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS 120
           VRFQIGEVFAHVP +EVETRLEEMKE T KNLEKLEEEKVSIV+QM  LKKILYGKFGDS
Sbjct: 61  VRFQIGEVFAHVPTEEVETRLEEMKEATAKNLEKLEEEKVSIVSQMDALKKILYGKFGDS 120

Query: 121 INLEEE 127
           INLEEE
Sbjct: 121 INLEEE 126

[Close]

BLAST of Spo26986.1 vs. UniProtKB/TrEMBL
Match: M5WDI4_PRUPE (Prefoldin subunit 4 OS=Prunus persica GN=PRUPE_ppa013376mg PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 2.800e-49
Identity = 103/126 (81.75%), Postives = 117/126 (92.86%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM 60
           MQQG GS+T+VTWEDQQNINKF +LNNRFHEL DEIKFAK+  ENLEDA NELILTDEE+
Sbjct: 1   MQQGGGSETEVTWEDQQNINKFGRLNNRFHELQDEIKFAKESNENLEDASNELILTDEEV 60

Query: 61  VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS 120
           VRFQIGEVFAHVPK+EVE+R+EEMKE+T KNLEKLEEEK SI+AQM++LK+ILYGKF DS
Sbjct: 61  VRFQIGEVFAHVPKEEVESRIEEMKEVTSKNLEKLEEEKESILAQMAELKQILYGKFKDS 120

Query: 121 INLEEE 127
           INLEE+
Sbjct: 121 INLEED 126

[Close]

BLAST of Spo26986.1 vs. UniProtKB/TrEMBL
Match: B9SZ63_RICCO (Prefoldin subunit 4 OS=Ricinus communis GN=RCOM_0484410 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 1.100e-48
Identity = 101/126 (80.16%), Postives = 115/126 (91.27%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM 60
           MQQG GS+T VTWEDQQNINKF +LNNRFHEL DEIK AK+  +NLEDA NELILTDEE+
Sbjct: 1   MQQGGGSETVVTWEDQQNINKFGRLNNRFHELEDEIKIAKETNDNLEDASNELILTDEEV 60

Query: 61  VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS 120
           VRFQIGEVFAH+PK+EVETR+EEMKE+T KNLEKLEEEK SI+ QM++LKK+LYGKFGDS
Sbjct: 61  VRFQIGEVFAHIPKEEVETRIEEMKEVTNKNLEKLEEEKDSILTQMAELKKVLYGKFGDS 120

Query: 121 INLEEE 127
           INLEE+
Sbjct: 121 INLEED 126

[Close]

BLAST of Spo26986.1 vs. UniProtKB/TrEMBL
Match: A0A0D2SCL4_GOSRA (Prefoldin subunit 4 OS=Gossypium raimondii GN=B456_013G120600 PE=3 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.400e-48
Identity = 104/127 (81.89%), Postives = 116/127 (91.34%), Query Frame = 1


		  
Query: 1   MQQGTG-SDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEE 60
           MQQGTG S+T+VTWEDQQNINKF +LNNRFHEL DEIK AK+  +NLEDA NELILTDEE
Sbjct: 1   MQQGTGGSETEVTWEDQQNINKFGRLNNRFHELEDEIKVAKEAIDNLEDASNELILTDEE 60

Query: 61  MVRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGD 120
           +VRFQIGEVFAHVPK+EVETR+EEMKEL  KNLEKLEEEK S+VAQM++LKKILYGKF D
Sbjct: 61  VVRFQIGEVFAHVPKEEVETRIEEMKELNSKNLEKLEEEKESVVAQMAELKKILYGKFKD 120

Query: 121 SINLEEE 127
           SINLEE+
Sbjct: 121 SINLEED 127

[Close]

BLAST of Spo26986.1 vs. ExPASy Swiss-Prot
Match: PFD4_ARATH (Probable prefoldin subunit 4 OS=Arabidopsis thaliana GN=AIP3 PE=1 SV=3)

HSP 1 Score: 184.5 bits (467), Expect = 7.200e-46
Identity = 96/127 (75.59%), Postives = 112/127 (88.19%), Query Frame = 1


		  
Query: 2   QQG--TGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEE 61
           QQG  +GS+ +VTWEDQQNIN FS+LNNR H+L D+IK AK+KCENLEDAGNELIL DEE
Sbjct: 3   QQGSKSGSEMEVTWEDQQNINIFSRLNNRVHDLDDDIKSAKEKCENLEDAGNELILADEE 62

Query: 62  MVRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGD 121
           MVRFQIGEVFAHVP+D+VET++EEMKE T K+LEKLE+EK SIV QM+ LKK+LY KF D
Sbjct: 63  MVRFQIGEVFAHVPRDDVETKIEEMKEATCKSLEKLEQEKESIVTQMAALKKVLYAKFKD 122

Query: 122 SINLEEE 127
           SINLEE+
Sbjct: 123 SINLEED 129

[Close]

BLAST of Spo26986.1 vs. ExPASy Swiss-Prot
Match: PFD4_AVEFA (Probable prefoldin subunit 4 OS=Avena fatua GN=VIP3 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 7.200e-46
Identity = 93/126 (73.81%), Postives = 110/126 (87.30%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEEM 60
           MQQG G++ QVTWEDQQNIN+F +LNNRFHEL DEI+ AK+  ENLEDAGNELIL DE++
Sbjct: 1   MQQGDGTEAQVTWEDQQNINRFGRLNNRFHELTDEIRLAKEANENLEDAGNELILCDEDV 60

Query: 61  VRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGDS 120
           VRFQIGEVFAH+P D+VE RLE+MKE   K LE+LEEEK SI+AQM++LKKILYGKF D+
Sbjct: 61  VRFQIGEVFAHMPMDDVEARLEQMKEDAAKKLERLEEEKESILAQMAELKKILYGKFKDA 120

Query: 121 INLEEE 127
           INLEE+
Sbjct: 121 INLEED 126

[Close]

BLAST of Spo26986.1 vs. ExPASy Swiss-Prot
Match: PFD4_HUMAN (Prefoldin subunit 4 OS=Homo sapiens GN=PFDN4 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 3.700e-18
Identity = 52/128 (40.62%), Postives = 83/128 (64.84%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEE- 60
           M++    D  VT+EDQQ INKF++  +R  EL +EI+  K + +NLEDA ++++L D++ 
Sbjct: 5   MKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDC 64

Query: 61  -MVRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFG 120
            M+ +QIG+VF    ++E +  LEE K+  ++ ++ LE    SI   ++DLK  LY KFG
Sbjct: 65  LMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFG 124

Query: 121 DSINLEEE 127
            +INLE +
Sbjct: 125 SNINLEAD 132

[Close]

BLAST of Spo26986.1 vs. ExPASy Swiss-Prot
Match: PFD4_BOVIN (Prefoldin subunit 4 OS=Bos taurus GN=PFDN4 PE=2 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 4.800e-18
Identity = 52/128 (40.62%), Postives = 82/128 (64.06%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEE- 60
           M++    D  VT+EDQQ INKF++  +R  EL +EI+  K + +NLEDA  +++L D++ 
Sbjct: 5   MKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACEDIMLADDDC 64

Query: 61  -MVRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFG 120
            M+ +QIG+VF    ++E +  LEE K+  ++ ++ LE    SI   ++DLK  LY KFG
Sbjct: 65  LMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFG 124

Query: 121 DSINLEEE 127
            +INLE +
Sbjct: 125 SNINLEAD 132

[Close]

BLAST of Spo26986.1 vs. ExPASy Swiss-Prot
Match: PFD4_YEAST (Prefoldin subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIM3 PE=1 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 2.000e-16
Identity = 50/125 (40.00%), Postives = 82/125 (65.60%), Query Frame = 1


		  
Query: 1   MQQGTGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDE-E 60
           + QG  ++TQVT+EDQQ IN+FSKL  R   +  E+   +++ E L+D   E+ L DE E
Sbjct: 4   LPQGQRNNTQVTFEDQQKINEFSKLIMRKDAIAQELSLQREEKEYLDDVSLEIELIDEDE 63

Query: 61  MVRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGD 120
            V++++G++F  + + +V  +LE+  E  +  +E LE+++  I +++  LK ILY KFGD
Sbjct: 64  PVQYKVGDLFIFMKQSKVTAQLEKDAERLDNKIETLEDKQRDIDSRLDALKAILYAKFGD 123

Query: 121 SINLE 125
           +INLE
Sbjct: 124 NINLE 128

[Close]

BLAST of Spo26986.1 vs. TAIR (Arabidopsis)
Match: AT1G08780.1 (ABI3-interacting protein 3)

HSP 1 Score: 184.5 bits (467), Expect = 4.000e-47
Identity = 96/127 (75.59%), Postives = 112/127 (88.19%), Query Frame = 1


		  
Query: 2   QQG--TGSDTQVTWEDQQNINKFSKLNNRFHELIDEIKFAKDKCENLEDAGNELILTDEE 61
           QQG  +GS+ +VTWEDQQNIN FS+LNNR H+L D+IK AK+KCENLEDAGNELIL DEE
Sbjct: 3   QQGSKSGSEMEVTWEDQQNINIFSRLNNRVHDLDDDIKSAKEKCENLEDAGNELILADEE 62

Query: 62  MVRFQIGEVFAHVPKDEVETRLEEMKELTEKNLEKLEEEKVSIVAQMSDLKKILYGKFGD 121
           MVRFQIGEVFAHVP+D+VET++EEMKE T K+LEKLE+EK SIV QM+ LKK+LY KF D
Sbjct: 63  MVRFQIGEVFAHVPRDDVETKIEEMKEATCKSLEKLEQEKESIVTQMAALKKVLYAKFKD 122

Query: 122 SINLEEE 127
           SINLEE+
Sbjct: 123 SINLEED 129

The following BLAST results are available for this feature:

BLAST of Spo26986.1 vs. NCBI nr
BLAST of Spo26986.1 vs. UniProtKB/TrEMBL
BLAST of Spo26986.1 vs. ExPASy Swiss-Prot
BLAST of Spo26986.1 vs. TAIR (Arabidopsis)

BLAST of Spo26986.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902220334\|gb\|KNA18580.1\|	3.5e-61	99.2	hypothetical protein SOVF_0694...	[more]
gi\|731328072\|ref\|XP_010674850.1\|	1.9e-54	89.6	PREDICTED: probable prefoldin ...	[more]
gi\|595830826\|ref\|XP_007206144.1\|	4.1e-49	81.7	hypothetical protein PRUPE_ppa...	[more]
gi\|802758496\|ref\|XP_012089276.1\|	4.1e-49	81.7	PREDICTED: probable prefoldin ...	[more]
gi\|645222685\|ref\|XP_008218277.1\|	6.9e-49	81.7	PREDICTED: probable prefoldin ...	[more]

BLAST of Spo26986.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RGH7_SPIOL	2.5e-61	99.2	Prefoldin subunit 4 OS=Spinaci...	[more]
A0A0J8CNL3_BETVU	1.3e-54	89.6	Prefoldin subunit 4 OS=Beta vu...	[more]
M5WDI4_PRUPE	2.8e-49	81.7	Prefoldin subunit 4 OS=Prunus ...	[more]
B9SZ63_RICCO	1.1e-48	80.1	Prefoldin subunit 4 OS=Ricinus...	[more]
A0A0D2SCL4_GOSRA	1.4e-48	81.8	Prefoldin subunit 4 OS=Gossypi...	[more]

BLAST of Spo26986.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PFD4_ARATH	7.2e-46	75.5	Probable prefoldin subunit 4 O...	[more]
PFD4_AVEFA	7.2e-46	73.8	Probable prefoldin subunit 4 O...	[more]
PFD4_HUMAN	3.7e-18	40.6	Prefoldin subunit 4 OS=Homo sa...	[more]
PFD4_BOVIN	4.8e-18	40.6	Prefoldin subunit 4 OS=Bos tau...	[more]
PFD4_YEAST	2.0e-16	40.0	Prefoldin subunit 4 OS=Sacchar...	[more]

BLAST of Spo26986.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT1G08780.1	4.0e-47	75.5	ABI3-interacting protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 16..119 score: 6.4
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 16..111 score: 9.
IPR009053	Prefoldin	unknown	SSF46579	Prefoldin	coord: 16..113 score: 5.8
IPR016661	Prefoldin, subunit 4	PIR	PIRSF016477	Prefoldin_4	coord: 1..125 score: 1.4
IPR016661	Prefoldin, subunit 4	PANTHER	PTHR21100:SF9	PREFOLDIN SUBUNIT 4	coord: 1..126 score: 1.5
None	No IPR available	unknown	Coil	Coil	coord: 74..112 score: -coord: 22..49 scor
None	No IPR available	PANTHER	PTHR21100	FAMILY NOT NAMED	coord: 1..126 score: 1.5

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0016272	prefoldin complex
cellular_component	GO:0005829	cytosol
molecular_function	GO:0051082	unfolded protein binding