Spo27131.1 (mRNA) | SpinachBase

Overview


Name	Spo27131.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Non-specific lipid-transfer protein
Location	chr5 : 27980402 .. 27981738 (-)
Sequence length	959

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAACTCCGGTTTTCTCAAGTTAGCTTGTGTAATATTAATGTGCATGCTGGTTGTAGCACCACATGCAGAGGCAGCCATGACCTGTGGCACTGTGACAAAAAACATTGCACAGTGTATTACTTACTTAAAGGGTGGGGACACCCCATCAGATGCTTGCTGCGCCGGGGTTAAGACCCTCAAGAACTTGGCTTCCACTTCAGAAGACAAGAAAGCTGCTTGCAACTGTCTGAAAACAGCAGCTGCCTCCATGACCGGTCTTGATGAAAAGAAGGCAGCAGGTCTTCCGGCTAAATGCAACGTCAGCATTTCTTATACCATTAGCCCCGATACTGACTGCTCTAAGTATGCTTCTATGTTTCTAACTTCTATGTCTTACCTTCATCCCTGTACTTTGAATACATCCCTAAGAAAATTATAAGCCCACCACATGTAGAGTCCGTTTTGAAGAGTACTAAACAAGTACTTTCAGTTAGGCTGAAAGAGTGCAGCTATAAGTGGCCTACAACAGAGAACCAATTAGATACACCTAGAACCACATATTCCCAAGTGATATGGCAGCCATCTAAGAAAGAAAGATGGGGTCTGCACTTTTTAATTTCTTGCTAGATTAATCAGGACCATGACTACTAAGCGCATAACACAACTTACTTTAAATTAATTGAGAAATCTGACTTTCCATAAACTAACTTTTATGTTTGTTCCGTATGTCTTACGTTGCAGGGTGAACTAGACGGATAATATTCCTGCTGAACAGAATACCAGAAGTAACCACCTATTATTGGCTGAAAAGCTTGAAGAATAAAGATCTTGATAGAGTTACTATCTCTGCAAGTCCATTCATCTTTCTATCTAATGCATATTTGTACTTGACTCTCCACTTATAAATTATTGTTACTCCGTATCTATTACCTATTTACTTCTTATACATGAGAATATTGTGTTCCCCACTTCAACATGTGAAATAAACAGGATAAATGAGTACTTGAATCCAATGGCTAACTCACCTCCATTAATCGGACACAGAAGACCCACTTCTTTTTGTAGGAGGCAAAACTTCCATCAACACGCCTAGAAAATGAAGAAAAAAAAAACTTGGTAACGCCAGCATTTGAAAATGAGAAATATTTACATTCATAAGGAGTAAATTACAGAGAAATTTTATGAATTACATATTTTCATAGCCTAGTCTATGAAGCCTAAAGTATTCCTATAGTCTAAGCAGCCCACATGAACTACAACATATTAGTAAACGGATCAACTCTATTAGAGGCTCTTGCATTCAGTGAAATGGTTGCATAGGCATGTAGAGAAAAACTGGTAAAATGTACAAAA

mRNA sequence

ATGGCTAACTCCGGTTTTCTCAAGTTAGCTTGTGTAATATTAATGTGCATGCTGGTTGTAGCACCACATGCAGAGGCAGCCATGACCTGTGGCACTGTGACAAAAAACATTGCACAGTGTATTACTTACTTAAAGGGTGGGGACACCCCATCAGATGCTTGCTGCGCCGGGGTTAAGACCCTCAAGAACTTGGCTTCCACTTCAGAAGACAAGAAAGCTGCTTGCAACTGTCTGAAAACAGCAGCTGCCTCCATGACCGGTCTTGATGAAAAGAAGGCAGCAGGTCTTCCGGCTAAATGCAACGTCAGCATTTCTTATACCATTAGCCCCGATACTGACTGCTCTAAGGTGAACTAGACGGATAATATTCCTGCTGAACAGAATACCAGAAGTAACCACCTATTATTGGCTGAAAAGCTTGAAGAATAAAGATCTTGATAGAGTTACTATCTCTGCAAGTCCATTCATCTTTCTATCTAATGCATATTTGTACTTGACTCTCCACTTATAAATTATTGTTACTCCGTATCTATTACCTATTTACTTCTTATACATGAGAATATTGTGTTCCCCACTTCAACATGTGAAATAAACAGGATAAATGAGTACTTGAATCCAATGGCTAACTCACCTCCATTAATCGGACACAGAAGACCCACTTCTTTTTGTAGGAGGCAAAACTTCCATCAACACGCCTAGAAAATGAAGAAAAAAAAAACTTGGTAACGCCAGCATTTGAAAATGAGAAATATTTACATTCATAAGGAGTAAATTACAGAGAAATTTTATGAATTACATATTTTCATAGCCTAGTCTATGAAGCCTAAAGTATTCCTATAGTCTAAGCAGCCCACATGAACTACAACATATTAGTAAACGGATCAACTCTATTAGAGGCTCTTGCATTCAGTGAAATGGTTGCATAGGCATGTAGAGAAAAACTGGTAAAATGTACAAAA

Coding sequence (CDS)

ATGGCTAACTCCGGTTTTCTCAAGTTAGCTTGTGTAATATTAATGTGCATGCTGGTTGTAGCACCACATGCAGAGGCAGCCATGACCTGTGGCACTGTGACAAAAAACATTGCACAGTGTATTACTTACTTAAAGGGTGGGGACACCCCATCAGATGCTTGCTGCGCCGGGGTTAAGACCCTCAAGAACTTGGCTTCCACTTCAGAAGACAAGAAAGCTGCTTGCAACTGTCTGAAAACAGCAGCTGCCTCCATGACCGGTCTTGATGAAAAGAAGGCAGCAGGTCTTCCGGCTAAATGCAACGTCAGCATTTCTTATACCATTAGCCCCGATACTGACTGCTCTAAGGTGAACTAG

Protein sequence

MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKTLKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKVN

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo27131	Spo27131	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo27131.1	Spo27131.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27131.1.CDS.2	Spo27131.1.CDS.2	CDS
Spo27131.1.CDS.1	Spo27131.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27131.1.utr3p.1	Spo27131.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27131.1.exon.2	Spo27131.1.exon.2	exon
Spo27131.1.exon.1	Spo27131.1.exon.1	exon

Homology

[Close]

BLAST of Spo27131.1 vs. NCBI nr
Match: gi|902226753|gb|KNA20466.1| (hypothetical protein SOVF_052130 [Spinacia oleracea])

HSP 1 Score: 229.6 bits (584), Expect = 2.900e-57
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1


		  
Query: 1   MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT 60
           MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT
Sbjct: 1   MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT 60

Query: 61  LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSK 117
           LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSK
Sbjct: 61  LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSK 116

[Close]

BLAST of Spo27131.1 vs. NCBI nr
Match: gi|731358518|ref|XP_010690793.1| (PREDICTED: non-specific lipid-transfer protein-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 186.0 bits (471), Expect = 3.700e-44
Identity = 93/118 (78.81%), Postives = 102/118 (86.44%), Query Frame = 1


		  
Query: 1   MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT 60
           MA+S FLK  C+  MCM+VVAPHAEAAM+CGTVTKNIAQCITYLKGGD+PS  CC GV T
Sbjct: 1   MASSAFLKFVCLAFMCMVVVAPHAEAAMSCGTVTKNIAQCITYLKGGDSPSKGCCDGVTT 60

Query: 61  LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKVN 119
           LKNLAST  DKK AC CLK+AAAS+ GLDEKKAAGLP KC VSISY+ISP+TDCSKVN
Sbjct: 61  LKNLASTPADKKTACACLKSAAASIKGLDEKKAAGLPDKCGVSISYSISPNTDCSKVN 118

[Close]

BLAST of Spo27131.1 vs. NCBI nr
Match: gi|731344615|ref|XP_010683515.1| (PREDICTED: non-specific lipid-transfer protein-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 147.1 bits (370), Expect = 1.900e-32
Identity = 71/112 (63.39%), Postives = 88/112 (78.57%), Query Frame = 1


		  
Query: 7   LKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKTLKNLAS 66
           +KLAC  LMCMLVVAPHAEAA+TCG VT ++  C+ YL+GG +PS ACC G+K+L ++AS
Sbjct: 5   MKLACATLMCMLVVAPHAEAAVTCGQVTSSLLPCLGYLQGGASPSPACCGGIKSLNSMAS 64

Query: 67  TSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKVN 119
           T  D+K AC CLK+AAAS+ G+D   A+GLP KC+VSI Y IS  TDCSKVN
Sbjct: 65  TPADRKTACGCLKSAAASVKGIDMSAASGLPGKCDVSIPYPISTSTDCSKVN 116

[Close]

BLAST of Spo27131.1 vs. NCBI nr
Match: gi|31879432|dbj|BAC77694.1| (lipid transfer protein [Atriplex nummularia])

HSP 1 Score: 139.4 bits (350), Expect = 4.000e-30
Identity = 69/118 (58.47%), Postives = 87/118 (73.73%), Query Frame = 1


		  
Query: 1   MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT 60
           MA+S   KLAC + MCMLV APHAEA +TCG VT ++  C++YL GG +P+ ACC GVK+
Sbjct: 1   MASSVVFKLACAVFMCMLVAAPHAEA-LTCGQVTSSMTPCMSYLTGGGSPTPACCGGVKS 60

Query: 61  LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKVN 119
           L ++AST  D+KAAC CLK+AA +MT L+   AA LP KC +S+ Y IS  TDCSKVN
Sbjct: 61  LNSMASTPADRKAACGCLKSAAGAMTNLNMGNAASLPGKCGISLPYPISTSTDCSKVN 117

[Close]

BLAST of Spo27131.1 vs. NCBI nr
Match: gi|585400342|dbj|BAO51648.1| (lipid transfer protein [Suaeda japonica])

HSP 1 Score: 138.3 bits (347), Expect = 8.800e-30
Identity = 67/118 (56.78%), Postives = 86/118 (72.88%), Query Frame = 1


		  
Query: 1   MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT 60
           MA+S  +K+ C  LMCMLV  P AEAA+TCG VT  +A C+ YLK G  P+ ACC GVK+
Sbjct: 1   MASSAMMKIVCATLMCMLVATPFAEAAITCGQVTSKLAPCMGYLKSGGAPTAACCGGVKS 60

Query: 61  LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKVN 119
           L ++AST  D+KAAC CLK+AAAS++G++   A+ LP+KC VSI Y IS   DC+KVN
Sbjct: 61  LNSMASTPADRKAACGCLKSAAASISGMNTAAASSLPSKCGVSIPYPISTSVDCAKVN 118

[Close]

BLAST of Spo27131.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLS1_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea GN=SOVF_052130 PE=3 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 2.000e-57
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 1


		  
Query: 1   MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT 60
           MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT
Sbjct: 1   MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT 60

Query: 61  LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSK 117
           LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSK
Sbjct: 61  LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSK 116

[Close]

BLAST of Spo27131.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJX5_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g216770 PE=3 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 2.600e-44
Identity = 93/118 (78.81%), Postives = 102/118 (86.44%), Query Frame = 1


		  
Query: 1   MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT 60
           MA+S FLK  C+  MCM+VVAPHAEAAM+CGTVTKNIAQCITYLKGGD+PS  CC GV T
Sbjct: 1   MASSAFLKFVCLAFMCMVVVAPHAEAAMSCGTVTKNIAQCITYLKGGDSPSKGCCDGVTT 60

Query: 61  LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKVN 119
           LKNLAST  DKK AC CLK+AAAS+ GLDEKKAAGLP KC VSISY+ISP+TDCSKVN
Sbjct: 61  LKNLASTPADKKTACACLKSAAASIKGLDEKKAAGLPDKCGVSISYSISPNTDCSKVN 118

[Close]

BLAST of Spo27131.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C2Q8_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g157260 PE=3 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.300e-32
Identity = 71/112 (63.39%), Postives = 88/112 (78.57%), Query Frame = 1


		  
Query: 7   LKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKTLKNLAS 66
           +KLAC  LMCMLVVAPHAEAA+TCG VT ++  C+ YL+GG +PS ACC G+K+L ++AS
Sbjct: 5   MKLACATLMCMLVVAPHAEAAVTCGQVTSSLLPCLGYLQGGASPSPACCGGIKSLNSMAS 64

Query: 67  TSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKVN 119
           T  D+K AC CLK+AAAS+ G+D   A+GLP KC+VSI Y IS  TDCSKVN
Sbjct: 65  TPADRKTACGCLKSAAASVKGIDMSAASGLPGKCDVSIPYPISTSTDCSKVN 116

[Close]

BLAST of Spo27131.1 vs. UniProtKB/TrEMBL
Match: Q7XZE0_ATRNU (Non-specific lipid-transfer protein OS=Atriplex nummularia GN=AnLTP PE=2 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 2.800e-30
Identity = 69/118 (58.47%), Postives = 87/118 (73.73%), Query Frame = 1


		  
Query: 1   MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT 60
           MA+S   KLAC + MCMLV APHAEA +TCG VT ++  C++YL GG +P+ ACC GVK+
Sbjct: 1   MASSVVFKLACAVFMCMLVAAPHAEA-LTCGQVTSSMTPCMSYLTGGGSPTPACCGGVKS 60

Query: 61  LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKVN 119
           L ++AST  D+KAAC CLK+AA +MT L+   AA LP KC +S+ Y IS  TDCSKVN
Sbjct: 61  LNSMASTPADRKAACGCLKSAAGAMTNLNMGNAASLPGKCGISLPYPISTSTDCSKVN 117

[Close]

BLAST of Spo27131.1 vs. UniProtKB/TrEMBL
Match: W6JNH5_9CARY (Non-specific lipid-transfer protein OS=Suaeda japonica GN=LTP PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 6.200e-30
Identity = 67/118 (56.78%), Postives = 86/118 (72.88%), Query Frame = 1


		  
Query: 1   MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT 60
           MA+S  +K+ C  LMCMLV  P AEAA+TCG VT  +A C+ YLK G  P+ ACC GVK+
Sbjct: 1   MASSAMMKIVCATLMCMLVATPFAEAAITCGQVTSKLAPCMGYLKSGGAPTAACCGGVKS 60

Query: 61  LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKVN 119
           L ++AST  D+KAAC CLK+AAAS++G++   A+ LP+KC VSI Y IS   DC+KVN
Sbjct: 61  LNSMASTPADRKAACGCLKSAAASISGMNTAAASSLPSKCGVSIPYPISTSVDCAKVN 118

[Close]

BLAST of Spo27131.1 vs. ExPASy Swiss-Prot
Match: NLTP3_LENCU (Non-specific lipid-transfer protein 3 OS=Lens culinaris PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 8.300e-28
Identity = 64/112 (57.14%), Postives = 83/112 (74.11%), Query Frame = 1


		  
Query: 7   LKLACVIL-MCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKTLKNLA 66
           + LACV L MCM+V+AP AEAA++CGTVT ++A CI YL GG  P+D+CCAGVK L   A
Sbjct: 5   MNLACVALVMCMVVIAPMAEAAVSCGTVTGDLAPCIPYLTGGAGPTDSCCAGVKKLLAAA 64

Query: 67  STSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKV 118
            T+ D++AACNCLKTAA ++  L+   AA LP KCNV+I Y IS  T+C+ +
Sbjct: 65  PTTADRQAACNCLKTAAGNINNLNPGNAAALPGKCNVNIPYKISTTTNCNTI 116

[Close]

BLAST of Spo27131.1 vs. ExPASy Swiss-Prot
Match: NLTP_SPIOL (Non-specific lipid-transfer protein OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 124.4 bits (311), Expect = 8.300e-28
Identity = 61/118 (51.69%), Postives = 83/118 (70.34%), Query Frame = 1


		  
Query: 1   MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT 60
           MA+S  +KLAC +L+C++V AP+AEA +TCG V+  +A CI YLKGG      CC G+K 
Sbjct: 1   MASSAVIKLACAVLLCIVVAAPYAEAGITCGMVSSKLAPCIGYLKGGPL-GGGCCGGIKA 60

Query: 61  LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKVN 119
           L   A+T+ D+K ACNCLK+AA ++ G++  KAAGLP  C V I Y ISP T+C+ V+
Sbjct: 61  LNAAAATTPDRKTACNCLKSAANAIKGINYGKAAGLPGMCGVHIPYAISPSTNCNAVH 117

[Close]

BLAST of Spo27131.1 vs. ExPASy Swiss-Prot
Match: NLTP_BETVU (Non-specific lipid-transfer protein OS=Beta vulgaris GN=IWF1' PE=3 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 2.400e-27
Identity = 59/118 (50.00%), Postives = 84/118 (71.19%), Query Frame = 1


		  
Query: 1   MANSGFLKLACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKT 60
           MA+S F+K  C ++MCM+V AP AEA +TCG V   +A CI YL+G   PS ACC G+K+
Sbjct: 1   MASSAFVKFTCALVMCMMVAAPLAEA-ITCGLVASKLAPCIGYLQGAPGPSAACCGGIKS 60

Query: 61  LKNLASTSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKVN 119
           L + A++  D+K AC CLK+AA S+ G++  KAA LP +C VS+ Y ISP+T+C+ ++
Sbjct: 61  LNSAAASPADRKTACTCLKSAATSIKGINYGKAASLPRQCGVSVPYAISPNTNCNAIH 117

[Close]

BLAST of Spo27131.1 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.100e-27
Identity = 61/112 (54.46%), Postives = 81/112 (72.32%), Query Frame = 1


		  
Query: 7   LKLAC-VILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKTLKNLA 66
           +KLAC V++MCM+V+AP AE A++CG VT +++ C+TYL GG  PS  CC GVK L   A
Sbjct: 5   MKLACVVLVMCMVVIAPMAEGAISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAA 64

Query: 67  STSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKV 118
           +T+ D++AACNCLK+AA S+T L+   AA LP KC V I Y IS  T+C+ V
Sbjct: 65  NTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTV 116

[Close]

BLAST of Spo27131.1 vs. ExPASy Swiss-Prot
Match: NLTP2_LENCU (Non-specific lipid-transfer protein 2 OS=Lens culinaris PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 9.100e-27
Identity = 61/112 (54.46%), Postives = 82/112 (73.21%), Query Frame = 1


		  
Query: 7   LKLACVILM-CMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKTLKNLA 66
           +KLACV+L+ CM+V+AP AE A++CG VT +++ C+TYL GG  PS  CC GVK L   A
Sbjct: 5   MKLACVVLVICMVVIAPMAEGAISCGAVTSDLSPCLTYLTGGPGPSPQCCGGVKKLLAAA 64

Query: 67  STSEDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKV 118
           +T+ D++AACNCLK+AA S+T L+   AA LP KC V+I Y IS  T+C+ V
Sbjct: 65  NTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTTTNCNTV 116

[Close]

BLAST of Spo27131.1 vs. TAIR (Arabidopsis)
Match: AT2G38530.1 (lipid transfer protein 2)

HSP 1 Score: 107.8 bits (268), Expect = 4.500e-24
Identity = 57/116 (49.14%), Postives = 79/116 (68.10%), Query Frame = 1


		  
Query: 4   SGFLKLACVILMCMLVVAP-HAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKTLK 63
           +G +KLAC++L CM+V  P  A A M+CGTV  N+A CI YL  G   +  CC GV  LK
Sbjct: 2   AGVMKLACMVLACMIVAGPITANALMSCGTVNGNLAGCIAYLTRGAPLTQGCCNGVTNLK 61

Query: 64  NLASTSEDKKAACNCLKTAAASM-TGLDEKKAAGLPAKCNVSISYTISPDTDCSKV 118
           N+AST+ D++ AC CL++AA ++  GL+  +AAGLP+ C V+I Y IS  T+C+ V
Sbjct: 62  NMASTTPDRQQACRCLQSAAKAVGPGLNTARAAGLPSACKVNIPYKISASTNCNTV 117

[Close]

BLAST of Spo27131.1 vs. TAIR (Arabidopsis)
Match: AT2G38540.1 (lipid transfer protein 1)

HSP 1 Score: 102.8 bits (255), Expect = 1.400e-22
Identity = 52/116 (44.83%), Postives = 79/116 (68.10%), Query Frame = 1


		  
Query: 4   SGFLKLACVILMCMLVVAP-HAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKTLK 63
           +G +KLAC++L CM+V  P  + AA++CG+V  N+A CI Y+  G     ACC+GVK L 
Sbjct: 2   AGVMKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLN 61

Query: 64  NLASTSEDKKAACNCLKTAAASM-TGLDEKKAAGLPAKCNVSISYTISPDTDCSKV 118
           ++A T+ D++ ACNC++ AA ++ +GL+  +AAG+P  C V+I Y IS  T+C  V
Sbjct: 62  SIAKTTPDRQQACNCIQGAARALGSGLNAGRAAGIPKACGVNIPYKISTSTNCKTV 117

[Close]

BLAST of Spo27131.1 vs. TAIR (Arabidopsis)
Match: AT5G59320.1 (lipid transfer protein 3)

HSP 1 Score: 95.5 bits (236), Expect = 2.300e-20
Identity = 47/107 (43.93%), Postives = 72/107 (67.29%), Query Frame = 1


		  
Query: 11  CVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKTLKNLASTSED 70
           C++L   +V +   +AA++CGTV  ++A C TYL  G     +CCAGVKTL ++A T+ D
Sbjct: 10  CLVLTVCIVAS--VDAAISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPD 69

Query: 71  KKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKV 118
           ++ AC C+++ A S++GL+   A+GLP KC VSI Y IS  T+C+ +
Sbjct: 70  RQQACRCIQSTAKSISGLNPSLASGLPGKCGVSIPYPISMSTNCNNI 114

[Close]

BLAST of Spo27131.1 vs. TAIR (Arabidopsis)
Match: AT3G51600.1 (lipid transfer protein 5)

HSP 1 Score: 93.2 bits (230), Expect = 1.100e-19
Identity = 52/115 (45.22%), Postives = 76/115 (66.09%), Query Frame = 1


		  
Query: 5   GFLKLACVILMCMLVVAPHA-EAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKTLKN 64
           G LKL+ ++++CMLV AP A EAA++CG VT ++ QC  YL  G      CC+GV+ L +
Sbjct: 3   GLLKLSTLVIVCMLVTAPMASEAAISCGAVTGSLGQCYNYLTRGGFIPRGCCSGVQRLNS 62

Query: 65  LASTSEDKKAACNCLKTAAASM-TGLDEKKAAGLPAKCNVSISYTISPDTDCSKV 118
           LA T+ D++ AC C++ AA ++ + L+  +AA LP  C V ISY IS  T+C+ V
Sbjct: 63  LARTTRDRQQACRCIQGAARALGSRLNAGRAARLPGACRVRISYPISARTNCNTV 117

[Close]

BLAST of Spo27131.1 vs. TAIR (Arabidopsis)
Match: AT3G51590.1 (lipid transfer protein 12)

HSP 1 Score: 87.8 bits (216), Expect = 4.800e-18
Identity = 45/110 (40.91%), Postives = 64/110 (58.18%), Query Frame = 1


		  
Query: 9   LACVILMCMLVVAPHAEAAMTCGTVTKNIAQCITYLKGGDTPSDACCAGVKTLKNLASTS 68
           + C+I++ + + +P  E+ + CGTVT  +AQC+TYL         CC GVK+L  LA T+
Sbjct: 8   ITCLIVLTIYMASP-TESTIQCGTVTSTLAQCLTYLTNSGPLPSQCCVGVKSLYQLAQTT 67

Query: 69  EDKKAACNCLKTAAASMTGLDEKKAAGLPAKCNVSISYTISPDTDCSKVN 119
            D+K  C CLK A   + GL+    A LP  C VSI Y IS  T+C  ++
Sbjct: 68  PDRKQVCECLKLAGKEIKGLNTDLVAALPTTCGVSIPYPISFSTNCDSIS 116

The following BLAST results are available for this feature:

BLAST of Spo27131.1 vs. NCBI nr
BLAST of Spo27131.1 vs. UniProtKB/TrEMBL
BLAST of Spo27131.1 vs. ExPASy Swiss-Prot
BLAST of Spo27131.1 vs. TAIR (Arabidopsis)

BLAST of Spo27131.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902226753\|gb\|KNA20466.1\|	2.9e-57	100.	hypothetical protein SOVF_0521...	[more]
gi\|731358518\|ref\|XP_010690793.1\|	3.7e-44	78.8	PREDICTED: non-specific lipid-...	[more]
gi\|731344615\|ref\|XP_010683515.1\|	1.9e-32	63.3	PREDICTED: non-specific lipid-...	[more]
gi\|31879432\|dbj\|BAC77694.1\|	4.0e-30	58.4	lipid transfer protein [Atripl...	[more]
gi\|585400342\|dbj\|BAO51648.1\|	8.8e-30	56.7	lipid transfer protein [Suaeda...	[more]

BLAST of Spo27131.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RLS1_SPIOL	2.0e-57	100.	Non-specific lipid-transfer pr...	[more]
A0A0J8BJX5_BETVU	2.6e-44	78.8	Non-specific lipid-transfer pr...	[more]
A0A0J8C2Q8_BETVU	1.3e-32	63.3	Non-specific lipid-transfer pr...	[more]
Q7XZE0_ATRNU	2.8e-30	58.4	Non-specific lipid-transfer pr...	[more]
W6JNH5_9CARY	6.2e-30	56.7	Non-specific lipid-transfer pr...	[more]

BLAST of Spo27131.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
NLTP3_LENCU	8.3e-28	57.1	Non-specific lipid-transfer pr...	[more]
NLTP_SPIOL	8.3e-28	51.6	Non-specific lipid-transfer pr...	[more]
NLTP_BETVU	2.4e-27	50.0	Non-specific lipid-transfer pr...	[more]
NLTP6_LENCU	9.1e-27	54.4	Non-specific lipid-transfer pr...	[more]
NLTP2_LENCU	9.1e-27	54.4	Non-specific lipid-transfer pr...	[more]

BLAST of Spo27131.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G38530.1	4.5e-24	49.1	lipid transfer protein 2	[more]
AT2G38540.1	1.4e-22	44.8	lipid transfer protein 1	[more]
AT5G59320.1	2.3e-20	43.9	lipid transfer protein 3	[more]
AT3G51600.1	1.1e-19	45.2	lipid transfer protein 5	[more]
AT3G51590.1	4.8e-18	40.9	lipid transfer protein 12	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant lipid transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 29..45 score: 7.2E-27coord: 87..104 score: 7.2E-27coord: 70..85 score: 7.2E-27coord: 49..63 score: 7.2E-27coord: 105..116 score: 7.2
IPR000528	Plant lipid transfer protein/Par allergen	PROSITE	PS00597	PLANT_LTP	coord: 96..117 scor
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 30..114 score: 5.
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 30..114 score: 1.5
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	unknown	SSF47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 29..117 score: 9.12
None	No IPR available	GENE3D	1.10.110.10		coord: 28..118 score: 4.7
None	No IPR available	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 1..118 score: 6.9
None	No IPR available	PANTHER	PTHR33076:SF11	BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED	coord: 1..118 score: 6.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding