Spo27181.1 (mRNA) | SpinachBase

Overview


Name	Spo27181.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Transducin/WD40 repeat-like superfamily protein
Location	SpoScf_01581 : 18223 .. 24002 (-)
Sequence length	1962

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTGTGGAGGGTTCCTCTGCTGGTTATGAAATCACAGAGGAAAGTCGCCAGGTAAGGGAACGGCAGGAGAAAGCTATGCGTGAGTTCATGATGAAACGGCGTGCTGCTGCTCTAGCTGTTCCCACAAACGATATGTCTGTGCGGACTCGGCTTCGGCGGCTTGGTGAACCTATTACTCTCTTTGGAGAGAGAGAGATGGAAAGACGGGACCGGCNACTCTCTTTGGAGAGAGAGAGATGGAAAGACGGGACCGGCTCCGGATGCTTATGGCTAAGCTTGATGCTGAGGGGCAATTGGAAAAGCTGATGAAAGCCCATGAGGAAGAGGAGGAAGCAGCTTCAGCTAAGGATGAGGTTGAAGAAGAAATGCTTCAGTATCCATTTTATACGGAAGGGACCCAAGAATTACTGGATGCTCGTAAGTTTTTAGTTAAGTTCTCTATTGTCAGAGCATCTCAGCGTCTGCAGCGTGCAAGGAGAAAAAGGGATGATCCAGATGAAGATGAGGATGCTGAAATCGATTGGGCTCTTAGACAGGCAGGAACTTTTGTTCTTGATTCCAGTGAGATTGGTGATGACCGCCCACTTTGTGGATGTTCATTTTCAAAAGATGGGAATTCACTTGCTACCTGGTATGTTCTTTAACTCTCTATTTTCTCTCTTAAACTGGTTGCCTGATTAGAGATTGAATGGTTGCAAAGTATTTTTCTTAGCCTTGATACAAGTTGATCATCATATTATCTATTGTTTGTCAAACTACCCATTTGGCCTCATATGCAAGCTGTGAGTCTGTGACCTGACTATGGATGGTATTTATCAATACTTGTTATTACCTGTCTGTTTTGTGCTATGTGATTAAGACTTGAGAAGATTTATCAAGATATATAAGTTTTGTTTTCATCCAAGAAAACTTGTTTCGCTTGCTACATGATAGGTTCTTTAGCTCTCTAATTTCTCTCTTAAACTGGTTGCCTGATTGGATATTGCTATGAATTAGCATAGATCACAGACCATAAATCAAGAGACTAAGGAAGATTTGATTAATAAACTGAAAGTACAAAAAGTAACCGATATTCAAGCATTCGAGAGGCTTGATTTCTCTCCCAATGAGCTCTTAAAAGCTCAACCAAATTACTCCACAATATTCAACATGCCTTCTCTCTCTAATTATCTCTATATATAGTGTAATTTCCTTAGCCCAACTACCTAGCTTATTCCCCAAGCTACTAATTAAGATAATATCTAAATTACCCTCCCTCATAATATCAGTTCATTGTAGATATTGAATGGTTTCAAAGTATTTTACTATTTTTTCTTAGGCTTGATACAAGTTTGGAGTTGTAGGAGTTGATCGTCATATTATCTATTGCTTGTCAAATACCCATTTGGACTTCATATGGAAGCTGTGAGCCTGTGACCAGACTGTGGATGGTATTTATCAATACTTGTTGTTACCTGTCATTCTGTTTTTGCTATGTGATTAAGATTTAAGAGGGTTTACTCAAGCTATAGAATTTTTGTTTTCATACAAGAAAACTTGTTTGAACTTTTTCCCCCTTTCCCCCTTCAATAGTATTCAATTTTTTTCATGTCATTCAGAACTTTCAGTGCGCTTGTTCTCTTTGTTTTTCTTTTACTTCTATATTTTTAGTTTGTTTTGGGGGTGGGGCTGGGAGGTTTTCATTCGGTTGGCTAAAAATAATTATGAAATATCTATGTATTTGTTCTTTCTCTTCCTTTCCGTTATTTTATGTAATAGATTGCAATTACCTGTAATGAGTGCTTGCTGTGTTTCCAATTTACCTTTTCAGCTACAATTTATGCAATATGGTTAAACTTTGATCTTTTCGCTTCAAAATCTCTTCACAAATTTGGCTATAATGTTTAAGAAACGAAAGATACTGCAAAACTGAATTTTTTTTAGTAAGAATCAGAATGTTATGTTTGTTTGTATGTGAAAATGACGGAGAAAGAATCTCCATGGAGAAGATGCATGTTTTGGAAGGGGGAAGAGGACTTTAGCATCTTTTTGCCCTGAAGAGAAGTATTGTAAGTCGGGTAATTGCTGCTTGTCATTTATGAATGAACCAGAATAAGAATTGAAAATATTGAATGCGAGGGAACCGACTGCTATCCATTTGGTTCTGTAGACGTTGAACGTGTGACCATTTAGGTTTCAGATGATGTACTGTGATGAGTTGGGTAAGAGAGTTTTTAGGAATTCAGAAAAGTAAAGTTTTCTTTGCATGTTTTCTGGACATAATTCTGCGAGGGCTTGTTTTATTTTTGCCAGGGTGCTGATGGAAAGGTAATCAGGTCAAATTAAAATTAGATAAATTTCTTTGTCCAACTTGATTTATAAATTATGAGAGTTAGATTGACAATTGAGCTGACTAATCTGTTGTATCTGTCAAGATATGGAGAGCATGGTGCTTAACTGTGCATTCAATTAGCCAGGATTGCGGGGCCATTGCCCTAAATTATGAGACTGGTTTCTCATTTTTGAAGGCGAGTACTAATGGTCTGTTTATTGCTTGTTTTGTTTCTTTAGCTCTGTTAGCGGGGTTGCCAAGATATGGAGTATGCCTGAGGTGAAGAAGGTCTCTGCCTTGAAGGGACACACTGTGCATGCTACTGATGTTGCATTTTCTCCTGTAAGTGACAATGTAGCAACTGCCTCAGCTGATCGTACTGCAAAGTTGTGGAACACAGATGGCACTTTATTGAGAACATTTGAAGGTCATTTAGACCGCCTAGCTCGTATTGCCTTCCATCCATCTGGGAAGTACTTGGGCACTACAAGTTTTGACAAAACTTGGCGTTTGTGGGATATCGAAAGTGGTGCTGAGTTGCTTCTTCAAGAAGGCCATAGCAGGAGTGTTTATGCCATATCTTTCCATCCGGATGGATCATTGGTAGCATCATGTGGACTGGATTCTCTTACACGTGTCTGGGATCTTCGAACAGGGAGAAGTATTCTTGCTTTGGAAGGCCACATCAAACCTGTAAATTTCTTCTCTTGTCATTAACATTTATTTTTGTGATACTAACTCTGATTGTTGACTCATGTTTTTTCTTTTTCCTCTCAGGTTTATGGAGTTGATTTCTCTCCTAATGGCTATCATTTGGCCACTGGTTCTGAGGATAACACTTGTCGGATTTGGGACTTGAGAAAGAAAAAGTCATTGTACATAATTCCTGCCCATTCAAAGCTTATTTCACAGGTCAAATTTGAGCCTCAGGAGGGATATTATTTGGTCACTGCTTCATATGATACAACTGTTAAGGTATGAGACTTGGCACTCAATTGCTCTCAGTAGTCTGTTTTGTCAAGTTACAAGGAGTGTTTTGTCTCATTTTGCCCTATTTCATCAGGTATGGTCATCTCGAGACTTCAAGCTTATCAGGACATTGTCAGGACATGAAGCAAGAGTTACATCCTTAGATGTCACAGGAGGTAAGATCTTTTCTCTTGGTAAACTGTTAGTAAAAGTGATGCGTGCAAAATGGGAACTTATAGCAGCATCTCATTACAAGTTTATAACTGTCACCTTGGGATGGAATCATGGTAAAGTTTATGGAAGTTACCACTCAAAAACTGAATTTGATTAAAATACGAGTGAATGCAATTTGTCCCTTAAAATCTAAGGGGGCGTTTGGTTCACACAGGGTAAAGGGAACCGAAGAAAGGGAAAGGGGAGGAATAGAAATGAAACCCTTTGATATAAAATATTGTATGGGTAACCTATCTCTAAGAGCTCACCTTCTCTCACTAAGTCTCACTCGAGCAACAAATCTGAAATTTGACTACCTAAACAACCAAAATCCGCCGGGAAAACAGTAAATCCTGCCACCCTTCCGATCTGTTGCCCCCCCCCCTCCCCTCGCACCGCCTTCTTCTTCTATCTCTTTCTTCTCTAAAGAGGCCAAATTTGGTGTTTTAAAGGTCAATTTTTACCATTTAAAGACATACTACTGAGAGCAATTGAGTGCCAAGTAATTAACAATAAGAAAAGGTATTTTGCACTATTCATTCTTGTAAATTGATTTTTTTCCCGAAATCTTAGGGTTTGTTGTTGGGTTTTCAGGTGAGATACAGGGGTGTAGGTGGTTTGTGTGTGGCTTGAGGGTGGTTTGTGTGTGGCTTGAGGGTGGTTTTGTGGTAGTTTCGAGTGGTTTATGCCTTTATGGTGATTTTGAGTGGTTTCGGGATGGTTTCATGGTGGTAGGGGCAGTTTACGGTGTTGGGAGGGTGGTTTCGGGGGTATAGCTGGTGGTCTGGGAGGTGGACAATGGTGGGTGGTGGGTCGATGGTGGTAAGGTGGTTCCAGGTGGGTGTTGCTGCGGTGGATACACGGTGAGTGGGTTGACTGGTGAGGGTGTTGCAGGTGGTGGATGGTGTTCCATGGTTGGTCCAGGGTGTTGCAGGTGGTGGATGGTGTTCCATGGTTGGTCCAGGGTGTTGCAGGTGGTGGATGGTGTTCCATGGTTGGTCCAGGGTGTTGAAGGAAAGGGAATGGAAAAACCTGGGGGGTAGGGTATCAATGTAGAGGCCTTTAGGGGTAAGTGAAAAAGAAAAAGAGGTAAAGGACTAAAAGGGAATGACAAACAATAACAAAGGGAATCATCCAAGTTGATTCTCTTACCCATACATGAATACCAAACGACCCCTAACCCCTAACTGTGTTGATCATGGAATGGTTTGAAGATCATAAGCAGTTTTATATGTACGCACCTATGATTCTATGAGTGTCTGAGTTTGGTGATCGTACCAGTAGGTCTCAGAATCAAAAGTGTTAAATTAAACCTCATGAATGATTAAGCTGATTCTGAACACGTAGAGACCTTATTAACTTAGGACAGTAATATTTCTGATATAACTGGTTTTTGTGTTGATCTTCTCTTCTAAACTTGATATAGTTGAATAATATGTCTAAGCTATGCTGTGATAATCAGCTTATACGTGTTGTCTTAATTTGGAACCTTTTTAACGACTAGCTGAGTTATACTAGTACTCGGGCACTATCACATTGAATAATGATTAAGAAGTGGGATCGTTTTATCCCATAATGCAGTTAATCTTGCTTATTTATGTATTTTAGTAGAATTTGGTATTTCAAGTACGTGTTGTTTCTTAGAGGATATATGTTTTGCTTGCACTTTATATCTTGATTTGCTTGGCAGATGGGCAGTGCATCGCTACAGTTGGGCACGATCGGACGATCAAGCTCTGGTCGAGCAGTGTCCCTTCTGAAGAGAAGTCGATGGACTTGGACTGAGGCAATTTTGTACTGTTCTAACTGACCTGATAACTGACAGTGGGTTGTAACCGTTGTATTGGGTGATTGTCTTTAGCTGTTTTTATGAAATGTTAAATCAGTTATCTATTAGCGATTAGTTTTACAGTAGGTAATGAAATTACATGTAAGGATATGAGTATAATTTCACTGGTTATTTAGTACTCCCTTCGTCCCTTAATACTTGCACCGCTTTCCTTTTTAGGCCGTCCCTTAATACTTGCACCGCTTCTATAAATGAAAATTCATACCAATATTATATTATTTCTCACAATTACTTACTAACCCCACCTACACCCATATTCCCTACAAAAAATCATTTAAAAATTCACACTTCCATTCACCACTCTCCACCTCTTACGCATTTCCCACTAACTATATTAAAAAATATCTCACTATCAACTAACATCCATTAAATTAATAAGTCAATTCAAATGTCTTAAACTCCGCACCGGCCAAACCGGTGCGAGTATTAAGGGACGGA

mRNA sequence

GGTGTGGAGGGTTCCTCTGCTGGTTATGAAATCACAGAGGAAAGTCGCCAGGTAAGGGAACGGCAGGAGAAAGCTATGCGTGAGTTCATGATGAAACGGCGTGCTGCTGCTCTAGCTGTTCCCACAAACGATATGTCTGTGCGGACTCGGCTTCGGCGGCTTGGTGAACCTATTACTCTCTTTGGAGAGAGAGAGATGGAAAGACGGGACCGGCNACTCTCTTTGGAGAGAGAGAGATGGAAAGACGGGACCGGCTCCGGATGCTTATGGCTAAGCTTGATGCTGAGGGGCAATTGGAAAAGCTGATGAAAGCCCATGAGGAAGAGGAGGAAGCAGCTTCAGCTAAGGATGAGGTTGAAGAAGAAATGCTTCAGTATCCATTTTATACGGAAGGGACCCAAGAATTACTGGATGCTCGTAAGTTTTTAGTTAAGTTCTCTATTGTCAGAGCATCTCAGCGTCTGCAGCGTGCAAGGAGAAAAAGGGATGATCCAGATGAAGATGAGGATGCTGAAATCGATTGGGCTCTTAGACAGGCAGGAACTTTTGTTCTTGATTCCAGTGAGATTGGTGATGACCGCCCACTTTGTGGATGTTCATTTTCAAAAGATGGGAATTCACTTGCTACCTGCTCTGTTAGCGGGGTTGCCAAGATATGGAGTATGCCTGAGGTGAAGAAGGTCTCTGCCTTGAAGGGACACACTGTGCATGCTACTGATGTTGCATTTTCTCCTGTAAGTGACAATGTAGCAACTGCCTCAGCTGATCGTACTGCAAAGTTGTGGAACACAGATGGCACTTTATTGAGAACATTTGAAGGTCATTTAGACCGCCTAGCTCGTATTGCCTTCCATCCATCTGGGAAGTACTTGGGCACTACAAGTTTTGACAAAACTTGGCGTTTGTGGGATATCGAAAGTGGTGCTGAGTTGCTTCTTCAAGAAGGCCATAGCAGGAGTGTTTATGCCATATCTTTCCATCCGGATGGATCATTGGTAGCATCATGTGGACTGGATTCTCTTACACGTGTCTGGGATCTTCGAACAGGGAGAAGTATTCTTGCTTTGGAAGGCCACATCAAACCTGTTTATGGAGTTGATTTCTCTCCTAATGGCTATCATTTGGCCACTGGTTCTGAGGATAACACTTGTCGGATTTGGGACTTGAGAAAGAAAAAGTCATTGTACATAATTCCTGCCCATTCAAAGCTTATTTCACAGGTCAAATTTGAGCCTCAGGAGGGATATTATTTGGTCACTGCTTCATATGATACAACTGTTAAGGTATGGTCATCTCGAGACTTCAAGCTTATCAGGACATTGTCAGGACATGAAGCAAGAGTTACATCCTTAGATGTCACAGGAGATGGGCAGTGCATCGCTACAGTTGGGCACGATCGGACGATCAAGCTCTGGTCGAGCAGTGTCCCTTCTGAAGAGAAGTCGATGGACTTGGACTGAGGCAATTTTGTACTGTTCTAACTGACCTGATAACTGACAGTGGGTTGTAACCGTTGTATTGGGTGATTGTCTTTAGCTGTTTTTATGAAATGTTAAATCAGTTATCTATTAGCGATTAGTTTTACAGTAGGTAATGAAATTACATGTAAGGATATGAGTATAATTTCACTGGTTATTTAGTACTCCCTTCGTCCCTTAATACTTGCACCGCTTTCCTTTTTAGGCCGTCCCTTAATACTTGCACCGCTTCTATAAATGAAAATTCATACCAATATTATATTATTTCTCACAATTACTTACTAACCCCACCTACACCCATATTCCCTACAAAAAATCATTTAAAAATTCACACTTCCATTCACCACTCTCCACCTCTTACGCATTTCCCACTAACTATATTAAAAAATATCTCACTATCAACTAACATCCATTAAATTAATAAGTCAATTCAAATGTCTTAAACTCCGCACCGGCCAAACCGGTGCGAGTATTAAGGGACGGA

Coding sequence (CDS)

ATGGAAAGACGGGACCGGCTCCGGATGCTTATGGCTAAGCTTGATGCTGAGGGGCAATTGGAAAAGCTGATGAAAGCCCATGAGGAAGAGGAGGAAGCAGCTTCAGCTAAGGATGAGGTTGAAGAAGAAATGCTTCAGTATCCATTTTATACGGAAGGGACCCAAGAATTACTGGATGCTCGTAAGTTTTTAGTTAAGTTCTCTATTGTCAGAGCATCTCAGCGTCTGCAGCGTGCAAGGAGAAAAAGGGATGATCCAGATGAAGATGAGGATGCTGAAATCGATTGGGCTCTTAGACAGGCAGGAACTTTTGTTCTTGATTCCAGTGAGATTGGTGATGACCGCCCACTTTGTGGATGTTCATTTTCAAAAGATGGGAATTCACTTGCTACCTGCTCTGTTAGCGGGGTTGCCAAGATATGGAGTATGCCTGAGGTGAAGAAGGTCTCTGCCTTGAAGGGACACACTGTGCATGCTACTGATGTTGCATTTTCTCCTGTAAGTGACAATGTAGCAACTGCCTCAGCTGATCGTACTGCAAAGTTGTGGAACACAGATGGCACTTTATTGAGAACATTTGAAGGTCATTTAGACCGCCTAGCTCGTATTGCCTTCCATCCATCTGGGAAGTACTTGGGCACTACAAGTTTTGACAAAACTTGGCGTTTGTGGGATATCGAAAGTGGTGCTGAGTTGCTTCTTCAAGAAGGCCATAGCAGGAGTGTTTATGCCATATCTTTCCATCCGGATGGATCATTGGTAGCATCATGTGGACTGGATTCTCTTACACGTGTCTGGGATCTTCGAACAGGGAGAAGTATTCTTGCTTTGGAAGGCCACATCAAACCTGTTTATGGAGTTGATTTCTCTCCTAATGGCTATCATTTGGCCACTGGTTCTGAGGATAACACTTGTCGGATTTGGGACTTGAGAAAGAAAAAGTCATTGTACATAATTCCTGCCCATTCAAAGCTTATTTCACAGGTCAAATTTGAGCCTCAGGAGGGATATTATTTGGTCACTGCTTCATATGATACAACTGTTAAGGTATGGTCATCTCGAGACTTCAAGCTTATCAGGACATTGTCAGGACATGAAGCAAGAGTTACATCCTTAGATGTCACAGGAGATGGGCAGTGCATCGCTACAGTTGGGCACGATCGGACGATCAAGCTCTGGTCGAGCAGTGTCCCTTCTGAAGAGAAGTCGATGGACTTGGACTGA

Protein sequence

MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDARKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCGCSFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASADRTAKLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHSRSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATGSEDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLIRTLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSSVPSEEKSMDLD

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo27181	Spo27181	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo27181.1	Spo27181.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27181.1.utr5p.1	Spo27181.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27181.1.CDS.5	Spo27181.1.CDS.5	CDS
Spo27181.1.CDS.4	Spo27181.1.CDS.4	CDS
Spo27181.1.CDS.3	Spo27181.1.CDS.3	CDS
Spo27181.1.CDS.2	Spo27181.1.CDS.2	CDS
Spo27181.1.CDS.1	Spo27181.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27181.1.utr3p.1	Spo27181.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27181.1.exon.5	Spo27181.1.exon.5	exon
Spo27181.1.exon.4	Spo27181.1.exon.4	exon
Spo27181.1.exon.3	Spo27181.1.exon.3	exon
Spo27181.1.exon.2	Spo27181.1.exon.2	exon
Spo27181.1.exon.1	Spo27181.1.exon.1	exon

Homology

[Close]

BLAST of Spo27181.1 vs. NCBI nr
Match: gi|731324370|ref|XP_010672936.1| (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 717.6 bits (1851), Expect = 1.200e-203
Identity = 345/407 (84.77%), Postives = 377/407 (92.63%), Query Frame = 1


		  
Query: 1   MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDA 60
           MERRDRLRMLMAKLDAEGQL+ LMKAHEEEEEAASA+DEV+E+++QYPFYTEGTQELL+A
Sbjct: 193 MERRDRLRMLMAKLDAEGQLDMLMKAHEEEEEAASARDEVDEQIIQYPFYTEGTQELLEA 252

Query: 61  RKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCGC 120
           RKF+ KFSIV+ASQRLQ ARRKRDDPDEDEDAEIDWALRQA TF L SSE GDDRPL GC
Sbjct: 253 RKFIAKFSIVKASQRLQSARRKRDDPDEDEDAEIDWALRQAKTFALASSEYGDDRPLWGC 312

Query: 121 SFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASADRTA 180
           SFS+DGN LATCS +GVAKIWSMP+V +V+ L+GHT H TD+AFSPVSD VAT+S DRTA
Sbjct: 313 SFSRDGNLLATCSSNGVAKIWSMPQVTRVATLRGHTEHVTDIAFSPVSDYVATSSVDRTA 372

Query: 181 KLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHSR 240
           +LWN+DGTLLR FEGHL RLARIAFHPSGKYLGT SFDKTWRLWDIE+GAELLLQEGHSR
Sbjct: 373 RLWNSDGTLLRKFEGHLKRLARIAFHPSGKYLGTASFDKTWRLWDIETGAELLLQEGHSR 432

Query: 241 SVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATGS 300
            VY ISFHPDGSL ASCGLDSL RVWDLRTGRS+LALEGH+ PV+GVDFSPNGYHLATGS
Sbjct: 433 DVYGISFHPDGSLAASCGLDSLARVWDLRTGRSVLALEGHVNPVFGVDFSPNGYHLATGS 492

Query: 301 EDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLIR 360
           EDNTCRIWDLRKKKS Y+IPAHSK +S+VKFEPQ+GYYLVTASYDTT KVWSSRDFK I+
Sbjct: 493 EDNTCRIWDLRKKKSFYVIPAHSKQLSRVKFEPQDGYYLVTASYDTTAKVWSSRDFKPIK 552

Query: 361 TLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSSVPSEEKSMDLD 408
           TLSGHE+RV SLD+TGDGQCIATV HDRTIKLWSSSVPSE+KSMD+D
Sbjct: 553 TLSGHESRVASLDITGDGQCIATVAHDRTIKLWSSSVPSEDKSMDVD 599

[Close]

BLAST of Spo27181.1 vs. NCBI nr
Match: gi|147819065|emb|CAN64891.1| (hypothetical protein VITISV_016440 [Vitis vinifera])

HSP 1 Score: 662.9 bits (1709), Expect = 3.600e-187
Identity = 322/408 (78.92%), Postives = 364/408 (89.22%), Query Frame = 1


		  
Query: 1    MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAAS-AKDEVEEEMLQYPFYTEGTQELLD 60
            MERRDRLRM+MAKLDAEGQLEKLMKAHEEEE AA  A +EVEEE LQYPFYTEG++ LL+
Sbjct: 681  MERRDRLRMIMAKLDAEGQLEKLMKAHEEEEAAAPVAMEEVEEETLQYPFYTEGSKSLLE 740

Query: 61   ARKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCG 120
            AR  + K+SI RA+ RL RARRKRDDPDED DAE+DW L++AG+ VLD SEIGDDRPL G
Sbjct: 741  ARVEIAKYSIKRAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRPLSG 800

Query: 121  CSFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASADRT 180
            CSFS DG  LA C++SGVAKIWSMP+V KVSALKGHT  ATDVAFSP  +++ATASADRT
Sbjct: 801  CSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASADRT 860

Query: 181  AKLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHS 240
            A+LWN++G+LL+TFEGHLDRLARIAFHPSGKYLGT SFDKTWRLWD+E+G ELLLQEGHS
Sbjct: 861  ARLWNSEGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHS 920

Query: 241  RSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATG 300
            RSVY ISFH DGSL ASCGLD+L RVWDLR+GRSILALEGH+KPV G+ FSPNGYHLATG
Sbjct: 921  RSVYGISFHRDGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLATG 980

Query: 301  SEDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLI 360
            +EDNTCRIWDLRKKKSLY+IPAHS L+SQVKFEPQEGY+LVTASYD T KVWS+RDFK +
Sbjct: 981  AEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFKPV 1040

Query: 361  RTLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSSVPSEEKSMDLD 408
            +TLSGHEA+VTSLD+T DG CIATV HDRTIKLWSS+   +EK+MD+D
Sbjct: 1041 KTLSGHEAKVTSLDITEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 1088

[Close]

BLAST of Spo27181.1 vs. NCBI nr
Match: gi|731400356|ref|XP_010653924.1| (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Vitis vinifera])

HSP 1 Score: 662.9 bits (1709), Expect = 3.600e-187
Identity = 322/408 (78.92%), Postives = 364/408 (89.22%), Query Frame = 1


		  
Query: 1   MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAAS-AKDEVEEEMLQYPFYTEGTQELLD 60
           MERRDRLRM+MAKLDAEGQLEKLMKAHEEEE AA  A +EVEEE LQYPFYTEG++ LL+
Sbjct: 170 MERRDRLRMIMAKLDAEGQLEKLMKAHEEEEAAAPVAMEEVEEETLQYPFYTEGSKSLLE 229

Query: 61  ARKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCG 120
           AR  + K+SI RA+ RL RARRKRDDPDED DAE+DW L++AG+ VLD SEIGDDRPL G
Sbjct: 230 ARVEIAKYSIKRAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRPLSG 289

Query: 121 CSFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASADRT 180
           CSFS DG  LA C++SGVAKIWSMP+V KVSALKGHT  ATDVAFSP  +++ATASADRT
Sbjct: 290 CSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASADRT 349

Query: 181 AKLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHS 240
           A+LWN++G+LL+TFEGHLDRLARIAFHPSGKYLGT SFDKTWRLWD+E+G ELLLQEGHS
Sbjct: 350 ARLWNSEGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHS 409

Query: 241 RSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATG 300
           RSVY ISFH DGSL ASCGLD+L RVWDLR+GRSILALEGH+KPV G+ FSPNGYHLATG
Sbjct: 410 RSVYGISFHRDGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLATG 469

Query: 301 SEDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLI 360
           +EDNTCRIWDLRKKKSLY+IPAHS L+SQVKFEPQEGY+LVTASYD T KVWS+RDFK +
Sbjct: 470 AEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFKPV 529

Query: 361 RTLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSSVPSEEKSMDLD 408
           +TLSGHEA+VTSLD+T DG CIATV HDRTIKLWSS+   +EK+MD+D
Sbjct: 530 KTLSGHEAKVTSLDITEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 577

[Close]

BLAST of Spo27181.1 vs. NCBI nr
Match: gi|802725067|ref|XP_012085943.1| (PREDICTED: LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Jatropha curcas])

HSP 1 Score: 662.1 bits (1707), Expect = 6.100e-187
Identity = 323/407 (79.36%), Postives = 362/407 (88.94%), Query Frame = 1


		  
Query: 1   MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDA 60
           MERRDRLRMLMAKLDAEGQLEKLMKAHEEEE A +   E E++M+QYPFYTEG++ELLDA
Sbjct: 164 MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEAATAGIQEDEDDMIQYPFYTEGSKELLDA 223

Query: 61  RKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCGC 120
           R  + ++SI +A+ RLQRARRKRDDPDED DAEIDWALRQAG  VLD SEIGDDRPL GC
Sbjct: 224 RIDIARYSIQKAALRLQRARRKRDDPDEDVDAEIDWALRQAGGLVLDCSEIGDDRPLSGC 283

Query: 121 SFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASADRTA 180
           SFS DG  LATC++SGVAKIWSMP+V KVS LKGHT  ATD+ FSPV ++VATASADRTA
Sbjct: 284 SFSSDGKLLATCALSGVAKIWSMPQVNKVSTLKGHTERATDITFSPVENHVATASADRTA 343

Query: 181 KLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHSR 240
           KLWNTDG++L+TF+GHLDRLARIAFHPSGKYLGTTSFDKTWRLWD+++G ELLLQEGHSR
Sbjct: 344 KLWNTDGSVLQTFKGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVDTGVELLLQEGHSR 403

Query: 241 SVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATGS 300
           SVY I+FH DGSL  SCGLD+L RVWDLRTGRSILALEGH+KPV G++FSPNGYHLATG 
Sbjct: 404 SVYGIAFHHDGSLAGSCGLDALARVWDLRTGRSILALEGHVKPVLGINFSPNGYHLATGG 463

Query: 301 EDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLIR 360
           EDNTCRIWDLRKKKSLYIIPAH+ LISQVKFEPQEGYYLVTASYD T KVWS RDFK ++
Sbjct: 464 EDNTCRIWDLRKKKSLYIIPAHANLISQVKFEPQEGYYLVTASYDMTAKVWSGRDFKPVK 523

Query: 361 TLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSSVPSEEKSMDLD 408
           TLSGHEA+VTSLDV  DG  IATV HDRTIKLWSS+  +E+++MD+D
Sbjct: 524 TLSGHEAKVTSLDVGSDGGYIATVSHDRTIKLWSST-NNEKEAMDVD 569

[Close]

BLAST of Spo27181.1 vs. NCBI nr
Match: gi|590688519|ref|XP_007042972.1| (WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related [Theobroma cacao])

HSP 1 Score: 661.0 bits (1704), Expect = 1.400e-186
Identity = 323/407 (79.36%), Postives = 355/407 (87.22%), Query Frame = 1


		  
Query: 1   MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDA 60
           MERRDRLRM+MAKLD+EGQLEKLMKAHEEEE A SAK E  EE +QYPFYTEG +ELLDA
Sbjct: 166 MERRDRLRMIMAKLDSEGQLEKLMKAHEEEEAAVSAKMEDVEEDIQYPFYTEGPKELLDA 225

Query: 61  RKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCGC 120
           R  + K+S+V A+ R+QRA+RKRDDPDED DAE DWALRQAG  VLD SEIGDDRPL GC
Sbjct: 226 RIDIAKYSVVTAAMRVQRAQRKRDDPDEDMDAETDWALRQAGNLVLDCSEIGDDRPLSGC 285

Query: 121 SFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASADRTA 180
           SFS+DG  LATCS+SGVAK+WSMP V KVSALKGHT  ATDV FSPV D++ATASADRTA
Sbjct: 286 SFSRDGQLLATCSLSGVAKLWSMPRVSKVSALKGHTERATDVTFSPVHDHLATASADRTA 345

Query: 181 KLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHSR 240
           KLWNTDG+LL TFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDI+SG ELLLQEGHSR
Sbjct: 346 KLWNTDGSLLTTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIDSGVELLLQEGHSR 405

Query: 241 SVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATGS 300
           SVY I+FH DGSL ASCGLD+L RVWDLRTGRS+LALEGH+KPV GV FSPNGYHLATG 
Sbjct: 406 SVYGIAFHQDGSLAASCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGG 465

Query: 301 EDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLIR 360
           EDNTCRIWDLRKKKSLYIIPAHS LISQVKFEPQEGYYLVTASYD T KVWS RDFK ++
Sbjct: 466 EDNTCRIWDLRKKKSLYIIPAHSNLISQVKFEPQEGYYLVTASYDMTAKVWSGRDFKPVK 525

Query: 361 TLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSSVPSEEKSMDLD 408
           +L GHEA+VT+ D++ D + I TV HDRTIKLW++    +EK MDLD
Sbjct: 526 SLPGHEAKVTASDISEDSRYIVTVSHDRTIKLWTAGNIGKEKDMDLD 572

[Close]

BLAST of Spo27181.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CT36_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g062190 PE=4 SV=1)

HSP 1 Score: 717.6 bits (1851), Expect = 8.500e-204
Identity = 345/407 (84.77%), Postives = 377/407 (92.63%), Query Frame = 1


		  
Query: 1   MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDA 60
           MERRDRLRMLMAKLDAEGQL+ LMKAHEEEEEAASA+DEV+E+++QYPFYTEGTQELL+A
Sbjct: 193 MERRDRLRMLMAKLDAEGQLDMLMKAHEEEEEAASARDEVDEQIIQYPFYTEGTQELLEA 252

Query: 61  RKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCGC 120
           RKF+ KFSIV+ASQRLQ ARRKRDDPDEDEDAEIDWALRQA TF L SSE GDDRPL GC
Sbjct: 253 RKFIAKFSIVKASQRLQSARRKRDDPDEDEDAEIDWALRQAKTFALASSEYGDDRPLWGC 312

Query: 121 SFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASADRTA 180
           SFS+DGN LATCS +GVAKIWSMP+V +V+ L+GHT H TD+AFSPVSD VAT+S DRTA
Sbjct: 313 SFSRDGNLLATCSSNGVAKIWSMPQVTRVATLRGHTEHVTDIAFSPVSDYVATSSVDRTA 372

Query: 181 KLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHSR 240
           +LWN+DGTLLR FEGHL RLARIAFHPSGKYLGT SFDKTWRLWDIE+GAELLLQEGHSR
Sbjct: 373 RLWNSDGTLLRKFEGHLKRLARIAFHPSGKYLGTASFDKTWRLWDIETGAELLLQEGHSR 432

Query: 241 SVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATGS 300
            VY ISFHPDGSL ASCGLDSL RVWDLRTGRS+LALEGH+ PV+GVDFSPNGYHLATGS
Sbjct: 433 DVYGISFHPDGSLAASCGLDSLARVWDLRTGRSVLALEGHVNPVFGVDFSPNGYHLATGS 492

Query: 301 EDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLIR 360
           EDNTCRIWDLRKKKS Y+IPAHSK +S+VKFEPQ+GYYLVTASYDTT KVWSSRDFK I+
Sbjct: 493 EDNTCRIWDLRKKKSFYVIPAHSKQLSRVKFEPQDGYYLVTASYDTTAKVWSSRDFKPIK 552

Query: 361 TLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSSVPSEEKSMDLD 408
           TLSGHE+RV SLD+TGDGQCIATV HDRTIKLWSSSVPSE+KSMD+D
Sbjct: 553 TLSGHESRVASLDITGDGQCIATVAHDRTIKLWSSSVPSEDKSMDVD 599

[Close]

BLAST of Spo27181.1 vs. UniProtKB/TrEMBL
Match: A5ATG0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016440 PE=4 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 2.500e-187
Identity = 322/408 (78.92%), Postives = 364/408 (89.22%), Query Frame = 1


		  
Query: 1    MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAAS-AKDEVEEEMLQYPFYTEGTQELLD 60
            MERRDRLRM+MAKLDAEGQLEKLMKAHEEEE AA  A +EVEEE LQYPFYTEG++ LL+
Sbjct: 681  MERRDRLRMIMAKLDAEGQLEKLMKAHEEEEAAAPVAMEEVEEETLQYPFYTEGSKSLLE 740

Query: 61   ARKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCG 120
            AR  + K+SI RA+ RL RARRKRDDPDED DAE+DW L++AG+ VLD SEIGDDRPL G
Sbjct: 741  ARVEIAKYSIKRAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRPLSG 800

Query: 121  CSFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASADRT 180
            CSFS DG  LA C++SGVAKIWSMP+V KVSALKGHT  ATDVAFSP  +++ATASADRT
Sbjct: 801  CSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASADRT 860

Query: 181  AKLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHS 240
            A+LWN++G+LL+TFEGHLDRLARIAFHPSGKYLGT SFDKTWRLWD+E+G ELLLQEGHS
Sbjct: 861  ARLWNSEGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHS 920

Query: 241  RSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATG 300
            RSVY ISFH DGSL ASCGLD+L RVWDLR+GRSILALEGH+KPV G+ FSPNGYHLATG
Sbjct: 921  RSVYGISFHRDGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLATG 980

Query: 301  SEDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLI 360
            +EDNTCRIWDLRKKKSLY+IPAHS L+SQVKFEPQEGY+LVTASYD T KVWS+RDFK +
Sbjct: 981  AEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFKPV 1040

Query: 361  RTLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSSVPSEEKSMDLD 408
            +TLSGHEA+VTSLD+T DG CIATV HDRTIKLWSS+   +EK+MD+D
Sbjct: 1041 KTLSGHEAKVTSLDITEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 1088

[Close]

BLAST of Spo27181.1 vs. UniProtKB/TrEMBL
Match: F6HLM8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g05930 PE=4 SV=1)

HSP 1 Score: 662.9 bits (1709), Expect = 2.500e-187
Identity = 322/408 (78.92%), Postives = 364/408 (89.22%), Query Frame = 1


		  
Query: 1   MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAAS-AKDEVEEEMLQYPFYTEGTQELLD 60
           MERRDRLRM+MAKLDAEGQLEKLMKAHEEEE AA  A +EVEEE LQYPFYTEG++ LL+
Sbjct: 252 MERRDRLRMIMAKLDAEGQLEKLMKAHEEEEAAAPVAMEEVEEETLQYPFYTEGSKSLLE 311

Query: 61  ARKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCG 120
           AR  + K+SI RA+ RL RARRKRDDPDED DAE+DW L++AG+ VLD SEIGDDRPL G
Sbjct: 312 ARVEIAKYSIKRAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRPLSG 371

Query: 121 CSFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASADRT 180
           CSFS DG  LA C++SGVAKIWSMP+V KVSALKGHT  ATDVAFSP  +++ATASADRT
Sbjct: 372 CSFSHDGKLLAACALSGVAKIWSMPQVNKVSALKGHTERATDVAFSPALNHLATASADRT 431

Query: 181 AKLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHS 240
           A+LWN++G+LL+TFEGHLDRLARIAFHPSGKYLGT SFDKTWRLWD+E+G ELLLQEGHS
Sbjct: 432 ARLWNSEGSLLKTFEGHLDRLARIAFHPSGKYLGTASFDKTWRLWDVETGEELLLQEGHS 491

Query: 241 RSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATG 300
           RSVY ISFH DGSL ASCGLD+L RVWDLR+GRSILALEGH+KPV G+ FSPNGYHLATG
Sbjct: 492 RSVYGISFHRDGSLAASCGLDALGRVWDLRSGRSILALEGHVKPVLGICFSPNGYHLATG 551

Query: 301 SEDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLI 360
           +EDNTCRIWDLRKKKSLY+IPAHS L+SQVKFEPQEGY+LVTASYD T KVWS+RDFK +
Sbjct: 552 AEDNTCRIWDLRKKKSLYVIPAHSNLVSQVKFEPQEGYFLVTASYDMTAKVWSARDFKPV 611

Query: 361 RTLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSSVPSEEKSMDLD 408
           +TLSGHEA+VTSLD+T DG CIATV HDRTIKLWSS+   +EK+MD+D
Sbjct: 612 KTLSGHEAKVTSLDITEDGHCIATVSHDRTIKLWSSAEIEKEKAMDID 659

[Close]

BLAST of Spo27181.1 vs. UniProtKB/TrEMBL
Match: A0A061E961_THECC (WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related OS=Theobroma cacao GN=TCM_007489 PE=4 SV=1)

HSP 1 Score: 661.0 bits (1704), Expect = 9.400e-187
Identity = 323/407 (79.36%), Postives = 355/407 (87.22%), Query Frame = 1


		  
Query: 1   MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDA 60
           MERRDRLRM+MAKLD+EGQLEKLMKAHEEEE A SAK E  EE +QYPFYTEG +ELLDA
Sbjct: 166 MERRDRLRMIMAKLDSEGQLEKLMKAHEEEEAAVSAKMEDVEEDIQYPFYTEGPKELLDA 225

Query: 61  RKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCGC 120
           R  + K+S+V A+ R+QRA+RKRDDPDED DAE DWALRQAG  VLD SEIGDDRPL GC
Sbjct: 226 RIDIAKYSVVTAAMRVQRAQRKRDDPDEDMDAETDWALRQAGNLVLDCSEIGDDRPLSGC 285

Query: 121 SFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASADRTA 180
           SFS+DG  LATCS+SGVAK+WSMP V KVSALKGHT  ATDV FSPV D++ATASADRTA
Sbjct: 286 SFSRDGQLLATCSLSGVAKLWSMPRVSKVSALKGHTERATDVTFSPVHDHLATASADRTA 345

Query: 181 KLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHSR 240
           KLWNTDG+LL TFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDI+SG ELLLQEGHSR
Sbjct: 346 KLWNTDGSLLTTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIDSGVELLLQEGHSR 405

Query: 241 SVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATGS 300
           SVY I+FH DGSL ASCGLD+L RVWDLRTGRS+LALEGH+KPV GV FSPNGYHLATG 
Sbjct: 406 SVYGIAFHQDGSLAASCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGG 465

Query: 301 EDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLIR 360
           EDNTCRIWDLRKKKSLYIIPAHS LISQVKFEPQEGYYLVTASYD T KVWS RDFK ++
Sbjct: 466 EDNTCRIWDLRKKKSLYIIPAHSNLISQVKFEPQEGYYLVTASYDMTAKVWSGRDFKPVK 525

Query: 361 TLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSSVPSEEKSMDLD 408
           +L GHEA+VT+ D++ D + I TV HDRTIKLW++    +EK MDLD
Sbjct: 526 SLPGHEAKVTASDISEDSRYIVTVSHDRTIKLWTAGNIGKEKDMDLD 572

[Close]

BLAST of Spo27181.1 vs. UniProtKB/TrEMBL
Match: A0A0D2R742_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G015500 PE=4 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 3.300e-184
Identity = 319/405 (78.77%), Postives = 354/405 (87.41%), Query Frame = 1


		  
Query: 1   MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDA 60
           MERR+RLRM+MAKLD+EGQLEKLMKAHEEEE A SAK E  EE ++YPFYTEG +ELLDA
Sbjct: 151 MERRERLRMIMAKLDSEGQLEKLMKAHEEEEAAISAKAEDIEEDIEYPFYTEGPKELLDA 210

Query: 61  RKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCGC 120
           R  + K+SIV+A+ RLQRARRKRDDPDED DAEIDWALRQAG  VLD SEIGDDRPL GC
Sbjct: 211 RIDIAKYSIVKAAARLQRARRKRDDPDEDMDAEIDWALRQAGNLVLDCSEIGDDRPLSGC 270

Query: 121 SFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASADRTA 180
           SFS+DG  LATCS+SGVAK+WSMP V KVSALKGHT  ATDV FSPV D +ATASADRTA
Sbjct: 271 SFSRDGKLLATCSLSGVAKLWSMPRVSKVSALKGHTERATDVTFSPVHDLLATASADRTA 330

Query: 181 KLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHSR 240
           KLW++DG+LL+TF GHLDRLARIAFHPSGKYLGTTSFDKTWRLWDI++G ELLLQEGHSR
Sbjct: 331 KLWSSDGSLLKTFGGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIDTGMELLLQEGHSR 390

Query: 241 SVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATGS 300
           SVY I+FH DGSLVASCGLD+L RVWDLRTGRSILALEGH+KPV G  FSPNGYHLATG 
Sbjct: 391 SVYGIAFHQDGSLVASCGLDALARVWDLRTGRSILALEGHVKPVLGASFSPNGYHLATGG 450

Query: 301 EDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLIR 360
           EDNTCRIWDLRKKKSLYIIPAHS LISQVKFEPQEGYYLVT+SYD T KVWS RDFK ++
Sbjct: 451 EDNTCRIWDLRKKKSLYIIPAHSNLISQVKFEPQEGYYLVTSSYDMTAKVWSGRDFKPVK 510

Query: 361 TLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSSVPSEEKSMD 406
           +L GHEA+VT+ D++ DG+ I TV HDRTIKLW++    +E  MD
Sbjct: 511 SLPGHEAKVTASDISADGRYIVTVSHDRTIKLWTAGNIEQENDMD 555

[Close]

BLAST of Spo27181.1 vs. ExPASy Swiss-Prot
Match: PRP4L_ARATH (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana GN=LIS PE=2 SV=1)

HSP 1 Score: 577.8 bits (1488), Expect = 9.400e-164
Identity = 277/412 (67.23%), Postives = 333/412 (80.83%), Query Frame = 1


		  
Query: 1   MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDA 60
           MERR RL  L+ + D  GQL+KL+K HEE+    + K+EV++E+L+YPF+TEG +EL +A
Sbjct: 145 MERRARLTQLLTRYDINGQLDKLVKDHEED---VTPKEEVDDEVLEYPFFTEGPKELREA 204

Query: 61  RKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCGC 120
           R  + KFS+ RA+ R+QRA+R+RDDPDED DAE  WAL+ A    LD S  GDDRPL GC
Sbjct: 205 RIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGC 264

Query: 121 SFSKDGNSLATCSVSGVAKIWSMPEVKK-VSALKGHTVHATDVAFSPVSDNVATASADRT 180
           SFS+DG  LATCS+SGV K+W MP+V   ++ LK H   ATDV FSPV D +ATASADRT
Sbjct: 265 SFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRT 324

Query: 181 AKLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHS 240
           AKLW TDGTLL+TFEGHLDRLAR+AFHPSGKYLGTTS+DKTWRLWDI +GAELLLQEGHS
Sbjct: 325 AKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHS 384

Query: 241 RSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATG 300
           RSVY I+F  DG+L ASCGLDSL RVWDLRTGRSIL  +GHIKPV+ V+FSPNGYHLA+G
Sbjct: 385 RSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASG 444

Query: 301 SEDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLI 360
            EDN CRIWDLR +KSLYIIPAH+ L+SQVK+EPQEGY+L TASYD  V +WS RDF L+
Sbjct: 445 GEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLV 504

Query: 361 RTLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSS----VPSEEKSMDLD 408
           ++L+GHE++V SLD+T D  CIATV HDRTIKLW+SS       E+++MD+D
Sbjct: 505 KSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDID 553

[Close]

BLAST of Spo27181.1 vs. ExPASy Swiss-Prot
Match: PRP4_BOVIN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 359.8 bits (922), Expect = 4.000e-98
Identity = 177/404 (43.81%), Postives = 263/404 (65.10%), Query Frame = 1


		  
Query: 2   ERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDAR 61
           ERR+RLR +++ +  +     L K  +++E++  +K+E ++      +Y EG   L  AR
Sbjct: 127 ERRERLRNILSVVGTDA----LKKTKKDDEKSKKSKEEYQQT-----WYHEGPHSLKVAR 186

Query: 62  KFLVKFSIVRASQRLQRARRKRDDPDEDEDA---EIDWALRQAGTFVLDSSEIGDDRPLC 121
            ++  +S+ RA +RL+ AR  ++ P+    +   E+  +LR    F    S+IGDDRP+ 
Sbjct: 187 LWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFC---SQIGDDRPIS 246

Query: 122 GCSFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSD--------N 181
            C FS +   LAT   SG+ K+WS+P+   +  L+GH  +   + F P S         N
Sbjct: 247 YCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVN 306

Query: 182 VATASADRTAKLWNTDGTL-LRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESG 241
           +A+ +AD + KLW+ D    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E+ 
Sbjct: 307 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQ 366

Query: 242 AELLLQEGHSRSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDF 301
            E+L QEGHS  VY I+FH DGSL  + GLD+  RVWDLRTGR I+ LEGH+K +YG++F
Sbjct: 367 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 426

Query: 302 SPNGYHLATGSEDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVK 361
           SPNGYH+ATGS DNTC++WDLR+++ +Y IPAH  L++ VKFEP  G +L+T +YD T K
Sbjct: 427 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 486

Query: 362 VWSSRDFKLIRTLSGHEARVTSLDVTGDGQCIATVGHDRTIKLW 394
           +W+   +  ++TL+GHE +V  LD++ DGQ IAT  +DRT KLW
Sbjct: 487 IWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of Spo27181.1 vs. ExPASy Swiss-Prot
Match: PRP4_HUMAN (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens GN=PRPF4 PE=1 SV=2)

HSP 1 Score: 359.4 bits (921), Expect = 5.300e-98
Identity = 177/404 (43.81%), Postives = 263/404 (65.10%), Query Frame = 1


		  
Query: 2   ERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDAR 61
           ERR+RLR +++ +  +     L K  +++E++  +K+E ++      +Y EG   L  AR
Sbjct: 128 ERRERLRNILSVVGTDA----LKKTKKDDEKSKKSKEEYQQT-----WYHEGPNSLKVAR 187

Query: 62  KFLVKFSIVRASQRLQRARRKRDDPDEDEDA---EIDWALRQAGTFVLDSSEIGDDRPLC 121
            ++  +S+ RA +RL+ AR  ++ P+    +   E+  +LR    F    S+IGDDRP+ 
Sbjct: 188 LWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFC---SQIGDDRPIS 247

Query: 122 GCSFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSD--------N 181
            C FS +   LAT   SG+ K+WS+P+   +  L+GH  +   + F P S         N
Sbjct: 248 YCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVN 307

Query: 182 VATASADRTAKLWNTDGTL-LRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESG 241
           +A+ +AD + KLW+ D    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E+ 
Sbjct: 308 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 367

Query: 242 AELLLQEGHSRSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDF 301
            E+L QEGHS  VY I+FH DGSL  + GLD+  RVWDLRTGR I+ LEGH+K +YG++F
Sbjct: 368 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 427

Query: 302 SPNGYHLATGSEDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVK 361
           SPNGYH+ATGS DNTC++WDLR+++ +Y IPAH  L++ VKFEP  G +L+T +YD T K
Sbjct: 428 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 487

Query: 362 VWSSRDFKLIRTLSGHEARVTSLDVTGDGQCIATVGHDRTIKLW 394
           +W+   +  ++TL+GHE +V  LD++ DGQ IAT  +DRT KLW
Sbjct: 488 IWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519

[Close]

BLAST of Spo27181.1 vs. ExPASy Swiss-Prot
Match: PRP4_PONAB (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 6.900e-98
Identity = 177/404 (43.81%), Postives = 263/404 (65.10%), Query Frame = 1


		  
Query: 2   ERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDAR 61
           ERR+RLR +++ +  +     L K  +++E++  +K+E ++      +Y EG   L  AR
Sbjct: 127 ERRERLRNILSVVGTDA----LKKTKKDDEKSKKSKEEYQQT-----WYHEGPNSLKVAR 186

Query: 62  KFLVKFSIVRASQRLQRARRKRDDPDEDEDA---EIDWALRQAGTFVLDSSEIGDDRPLC 121
            ++  +S+ RA +RL+ AR  ++ P+    +   E+  +LR    F    S+IGDDRP+ 
Sbjct: 187 LWIANYSLPRAMKRLEEARLHKEIPETTRASQMQELHKSLRSLNNFC---SQIGDDRPIS 246

Query: 122 GCSFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSD--------N 181
            C FS +   LAT   SG+ K+WS+P+   +  L+GH  +   + F P S         N
Sbjct: 247 YCHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVN 306

Query: 182 VATASADRTAKLWNTDGTL-LRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESG 241
           +A+ +AD + KLW+ D    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E+ 
Sbjct: 307 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 366

Query: 242 AELLLQEGHSRSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDF 301
            E+L QEGHS  VY I+FH DGSL  + GLD+  RVWDLRTGR I+ LEGH+K +YG++F
Sbjct: 367 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 426

Query: 302 SPNGYHLATGSEDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVK 361
           SPNGYH+ATGS DNTC++WDLR+++ +Y IPAH  L++ VKFEP  G +L+T +YD T K
Sbjct: 427 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAK 486

Query: 362 VWSSRDFKLIRTLSGHEARVTSLDVTGDGQCIATVGHDRTIKLW 394
           +W+   +  ++TL+GHE +V  LD++ DGQ IAT  +DRT KLW
Sbjct: 487 IWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of Spo27181.1 vs. ExPASy Swiss-Prot
Match: PRP4_MOUSE (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus GN=Prpf4 PE=1 SV=1)

HSP 1 Score: 359.0 bits (920), Expect = 6.900e-98
Identity = 177/404 (43.81%), Postives = 263/404 (65.10%), Query Frame = 1


		  
Query: 2   ERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDAR 61
           ERR+RLR +++ +  +     L K  +++E++  +K+E ++      +Y EG   L  AR
Sbjct: 127 ERRERLRNILSVVGTDA----LKKTKKDDEKSKKSKEEYQQT-----WYHEGPNSLKVAR 186

Query: 62  KFLVKFSIVRASQRLQRARRKRDDPDEDEDA---EIDWALRQAGTFVLDSSEIGDDRPLC 121
            ++  +S+ RA +RL+ AR  ++ P+    +   E+  +LR    F    S+IGDDRP+ 
Sbjct: 187 LWIANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFC---SQIGDDRPIS 246

Query: 122 GCSFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSD--------N 181
            C FS +   LAT   SG+ K+WS+P+   +  L+GH  +   + F P S         N
Sbjct: 247 YCHFSPNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVN 306

Query: 182 VATASADRTAKLWNTDGTL-LRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESG 241
           +A+ +AD + KLW+ D    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E+ 
Sbjct: 307 LASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQ 366

Query: 242 AELLLQEGHSRSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDF 301
            E+L QEGHS  VY I+FH DGSL  + GLD+  RVWDLRTGR I+ LEGH+K +YG++F
Sbjct: 367 EEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINF 426

Query: 302 SPNGYHLATGSEDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVK 361
           SPNGYH+ATGS DNTC++WDLR+++ +Y IPAH  L++ VKFEP  G +L+T +YD T K
Sbjct: 427 SPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAK 486

Query: 362 VWSSRDFKLIRTLSGHEARVTSLDVTGDGQCIATVGHDRTIKLW 394
           +W+   +  ++TL+GHE +V  LD++ DGQ IAT  +DRT KLW
Sbjct: 487 IWTHPGWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of Spo27181.1 vs. TAIR (Arabidopsis)
Match: AT2G41500.1 (WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related)

HSP 1 Score: 577.8 bits (1488), Expect = 5.300e-165
Identity = 277/412 (67.23%), Postives = 333/412 (80.83%), Query Frame = 1


		  
Query: 1   MERRDRLRMLMAKLDAEGQLEKLMKAHEEEEEAASAKDEVEEEMLQYPFYTEGTQELLDA 60
           MERR RL  L+ + D  GQL+KL+K HEE+    + K+EV++E+L+YPF+TEG +EL +A
Sbjct: 145 MERRARLTQLLTRYDINGQLDKLVKDHEED---VTPKEEVDDEVLEYPFFTEGPKELREA 204

Query: 61  RKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIGDDRPLCGC 120
           R  + KFS+ RA+ R+QRA+R+RDDPDED DAE  WAL+ A    LD S  GDDRPL GC
Sbjct: 205 RIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGDDRPLTGC 264

Query: 121 SFSKDGNSLATCSVSGVAKIWSMPEVKK-VSALKGHTVHATDVAFSPVSDNVATASADRT 180
           SFS+DG  LATCS+SGV K+W MP+V   ++ LK H   ATDV FSPV D +ATASADRT
Sbjct: 265 SFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASADRT 324

Query: 181 AKLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELLLQEGHS 240
           AKLW TDGTLL+TFEGHLDRLAR+AFHPSGKYLGTTS+DKTWRLWDI +GAELLLQEGHS
Sbjct: 325 AKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHS 384

Query: 241 RSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATG 300
           RSVY I+F  DG+L ASCGLDSL RVWDLRTGRSIL  +GHIKPV+ V+FSPNGYHLA+G
Sbjct: 385 RSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASG 444

Query: 301 SEDNTCRIWDLRKKKSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLI 360
            EDN CRIWDLR +KSLYIIPAH+ L+SQVK+EPQEGY+L TASYD  V +WS RDF L+
Sbjct: 445 GEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDFSLV 504

Query: 361 RTLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWSSS----VPSEEKSMDLD 408
           ++L+GHE++V SLD+T D  CIATV HDRTIKLW+SS       E+++MD+D
Sbjct: 505 KSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDID 553

[Close]

BLAST of Spo27181.1 vs. TAIR (Arabidopsis)
Match: AT2G05720.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 213.0 bits (541), Expect = 3.400e-55
Identity = 115/280 (41.07%), Postives = 160/280 (57.14%), Query Frame = 1


		  
Query: 53  GTQELLDARKFLVKFSIVRASQRLQRARRKRDDPDEDEDAEIDWALRQAGTFVLDSSEIG 112
           G  EL +AR  + K  I RA+ R+QR  R+R+DPDED++AE   AL+     VL SS+ G
Sbjct: 2   GPTELREARIEITKDFIKRAALRIQRENRRRNDPDEDKNAETKLALKHCKDMVLGSSKFG 61

Query: 113 DDRPLCGCSFSKDGNSLATCSVSGVAKIWSMPEV-KKVSALKGHTVHATDVAFSPVSDN- 172
           DDRPL GCS S+DG  L TCS+SGV K+W +P+V  K+  LKGH  H TDV FS V D  
Sbjct: 62  DDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDEC 121

Query: 173 VATASADRTAKLWNTDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGA 232
           +ATAS DRT K+W TDGTLL+TF+                   ++ FD   R+WD+ +  
Sbjct: 122 LATASTDRTEKIWKTDGTLLQTFK------------------ASSGFDSLARVWDLRTAR 181

Query: 233 ELLLQEGHSRSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFS 292
            +L+ +GH + V ++ F P+G  +AS G D+  R+WDLR  + +  +  H+  V  V + 
Sbjct: 182 NILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYE 241

Query: 293 P-NGYHLATGSEDNTCRIWDLRKKKSLYIIPAHSKLISQV 330
           P   Y LAT S D    IW  R    +  +  H   ++ +
Sbjct: 242 PQERYFLATASHDMNVNIWSGRDFSLVKSLVGHESKVASL 263

[Close]

BLAST of Spo27181.1 vs. TAIR (Arabidopsis)
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 164.9 bits (416), Expect = 1.100e-40
Identity = 93/290 (32.07%), Postives = 147/290 (50.69%), Query Frame = 1


		  
Query: 114 DRPLCGCSFSKDGNSLATCSVSGVAKIWSM-----PEVKKVSALKGHTVHATDVAFSPVS 173
           +R +    FS DG  LA+ S     + +++     P  + V    GH    +DVAFS  +
Sbjct: 24  NRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDA 83

Query: 174 DNVATASADRTAKLWNTD-GTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIE 233
             + +AS D+T KLW+ + G+L++T  GH +    + F+P    + + SFD+T R+WD+ 
Sbjct: 84  RFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVT 143

Query: 234 SGAELLLQEGHSRSVYAISFHPDGSLVASCGLDSLTRVWDLRTGRSILAL-EGHIKPVYG 293
           +G  L +   HS  V A+ F+ DGSL+ S   D L R+WD  TG  +  L +    PV  
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSF 203

Query: 294 VDFSPNGYHLATGSEDNTCRIWDLRKKKSLYIIPAH--SKLISQVKFEPQEGYYLVTASY 353
           V FSPNG  +  G+ DNT R+W++   K L     H  ++      F    G  +V+ S 
Sbjct: 204 VRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSE 263

Query: 354 DTTVKVWSSRDFKLIRTLSGHEARVTSLDVTGDGQCIATVGHDRTIKLWS 395
           D  V +W     KL++ L GH   V ++        IA+   D+T+++W+
Sbjct: 264 DNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWT 313

[Close]

BLAST of Spo27181.1 vs. TAIR (Arabidopsis)
Match: AT2G33340.1 (MOS4-associated complex 3B)

HSP 1 Score: 147.5 bits (371), Expect = 1.800e-35
Identity = 94/302 (31.13%), Postives = 148/302 (49.01%), Query Frame = 1


		  
Query: 117 LCGCSFSKDGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASA 176
           +C        + +AT  V   A ++  P  + +S L GH+   T V F   SD V TASA
Sbjct: 225 ICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASA 284

Query: 177 DRTAKLWNTDG----TLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAEL 236
           D+T ++W   G        T   H   +  +  HP+ KY  + S D TW  +D+ SG+ L
Sbjct: 285 DKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCL 344

Query: 237 LLQEGHSRSV--YAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFS 296
                 S++V   A +FHPDG ++ +    S+ ++WD+++  ++   +GH   V  + FS
Sbjct: 345 AQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFS 404

Query: 297 PNGYHLATGSEDNTCRIWDLRKK---KSLYIIPAHSKLISQVKFEPQEGYYLVTASYDTT 356
            NGY LAT +ED   R+WDLRK    KS     A+S     V+F+P   Y  + AS    
Sbjct: 405 ENGYFLATAAEDGV-RLWDLRKLRNFKSFLSADANS-----VEFDPSGSYLGIAAS---D 464

Query: 357 VKVWSSRDFK----LIRTLS--GHEARVTSLDVTGDGQCIATVGHDRTIKLWSSSVPSEE 404
           +KV+ +   K    LI+TL       + T +    D Q +A    DR ++++   +P +E
Sbjct: 465 IKVYQTASVKAEWNLIKTLPDLSGTGKATCVKFGSDAQYVAVGSMDRNLRIF--GLPGDE 515

[Close]

BLAST of Spo27181.1 vs. TAIR (Arabidopsis)
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 3.000e-35
Identity = 81/275 (29.45%), Postives = 145/275 (52.73%), Query Frame = 1


		  
Query: 125 DGNSLATCSVSGVAKIWSMPEVKKVSALKGHTVHATDVAFSPVSDNVATASADRTAKLWN 184
           + NS      SG   I+     + +  L+GHT   + V FS   + +A+AS D+T  LW+
Sbjct: 14  NANSTGNAGTSGNVPIYK--PYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWS 73

Query: 185 -TDGTLLRTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDIESGAELL-LQEGHSRSV 244
            T+ +L+  +EGH   ++ +A+     Y  + S D T R+WD  S  E L +  GH+  V
Sbjct: 74  ATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFV 133

Query: 245 YAISFHPDGSLVASCGLDSLTRVWDLRTGRSILALEGHIKPVYGVDFSPNGYHLATGSED 304
           + ++F+P  +L+ S   D   R+W+++TG+ +  ++ H  P+  V F+ +G  + + S D
Sbjct: 134 FCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHD 193

Query: 305 NTCRIWDLRKKKSL-YIIPAHSKLISQVKFEPQEGYYLVTASYDTTVKVWSSRDFKLIRT 364
            +C+IWD ++   L  +I   S  +S  KF P  G +++ A+ D+T+K+ +    K ++ 
Sbjct: 194 GSCKIWDAKEGTCLKTLIDDKSPAVSFAKFSP-NGKFILVATLDSTLKLSNYATGKFLKV 253

Query: 365 LSGHEARV---TSLDVTGDGQCIATVGHDRTIKLW 394
            +GH  +V   TS     +G+ I +   D  + LW
Sbjct: 254 YTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLW 285

The following BLAST results are available for this feature:

BLAST of Spo27181.1 vs. NCBI nr
BLAST of Spo27181.1 vs. UniProtKB/TrEMBL
BLAST of Spo27181.1 vs. ExPASy Swiss-Prot
BLAST of Spo27181.1 vs. TAIR (Arabidopsis)

BLAST of Spo27181.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|731324370\|ref\|XP_010672936.1\|	1.2e-203	84.7	PREDICTED: U4/U6 small nuclear...	[more]
gi\|147819065\|emb\|CAN64891.1\|	3.6e-187	78.9	hypothetical protein VITISV_01...	[more]
gi\|731400356\|ref\|XP_010653924.1\|	3.6e-187	78.9	PREDICTED: U4/U6 small nuclear...	[more]
gi\|802725067\|ref\|XP_012085943.1\|	6.1e-187	79.3	PREDICTED: LOW QUALITY PROTEIN...	[more]
gi\|590688519\|ref\|XP_007042972.1\|	1.4e-186	79.3	WD-40 repeat family protein / ...	[more]

BLAST of Spo27181.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0J8CT36_BETVU	8.5e-204	84.7	Uncharacterized protein OS=Bet...	[more]
A5ATG0_VITVI	2.5e-187	78.9	Putative uncharacterized prote...	[more]
F6HLM8_VITVI	2.5e-187	78.9	Putative uncharacterized prote...	[more]
A0A061E961_THECC	9.4e-187	79.3	WD-40 repeat family protein / ...	[more]
A0A0D2R742_GOSRA	3.3e-184	78.7	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo27181.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PRP4L_ARATH	9.4e-164	67.2	U4/U6 small nuclear ribonucleo...	[more]
PRP4_BOVIN	4.0e-98	43.8	U4/U6 small nuclear ribonucleo...	[more]
PRP4_HUMAN	5.3e-98	43.8	U4/U6 small nuclear ribonucleo...	[more]
PRP4_PONAB	6.9e-98	43.8	U4/U6 small nuclear ribonucleo...	[more]
PRP4_MOUSE	6.9e-98	43.8	U4/U6 small nuclear ribonucleo...	[more]

BLAST of Spo27181.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT2G41500.1	5.3e-165	67.2	WD-40 repeat family protein / ...	[more]
AT2G05720.1	3.4e-55	41.0	Transducin/WD40 repeat-like su...	[more]
AT3G49660.1	1.1e-40	32.0	Transducin/WD40 repeat-like su...	[more]
AT2G33340.1	1.8e-35	31.1	MOS4-associated complex 3B	[more]
AT4G02730.1	3.0e-35	29.4	Transducin/WD40 repeat-like su...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 357..394 score: 4.6E-7coord: 315..352 score: 0.016coord: 149..184 score: 5.6E-5coord: 275..309 score: 8.5E-10coord: 188..225 score: 6.4E-5coord: 236..267 score: 1.9E-5coord: 117..142 score:
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 103..142 score: 0.032coord: 355..394 score: 4.7E-10coord: 270..309 score: 2.0E-11coord: 145..184 score: 1.4E-6coord: 312..352 score: 1.0E-5coord: 186..225 score: 6.5E-8coord: 228..267 score: 8.
IPR001680	WD40 repeat	PROFILE	PS50082	WD_REPEATS_2	coord: 193..234 score: 13.884coord: 319..361 score: 13.148coord: 362..403 score: 13.048coord: 277..318 score: 16.958coord: 152..184 score: 12.58coord: 235..276 score: 1
IPR015943	WD40/YVTN repeat-like-containing domain	GENE3D	2.130.10.10		coord: 112..395 score: 2.1
IPR017986	WD40-repeat-containing domain	PROFILE	PS50294	WD_REPEATS_REGION	coord: 110..403 score: 65
IPR017986	WD40-repeat-containing domain	unknown	SSF50978	WD40 repeat-like	coord: 111..393 score: 1.07
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 296..310 score: -coord: 171..185 score: -coord: 212..226 score: -coord: 254..268 scor
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 339..353 score: 5.6E-7coord: 296..310 score: 5.6E-7coord: 171..185 score: 5.
IPR027106	U4/U6 small nuclear ribonucleoprotein Prp4	PANTHER	PTHR19846	WD40 REPEAT PROTEIN	coord: 1..400 score: 1.2E
None	No IPR available	unknown	Coil	Coil	coord: 13..46 scor
None	No IPR available	PANTHER	PTHR19846:SF0	U4/U6 SMALL NUCLEAR RIBONUCLEOPROTEIN PRP4	coord: 1..400 score: 1.2E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016573	histone acetylation
biological_process	GO:0042967	obsolete acyl-carrier-protein biosynthetic process
biological_process	GO:0008380	RNA splicing
cellular_component	GO:0000123	histone acetyltransferase complex
cellular_component	GO:1990904	ribonucleoprotein complex
cellular_component	GO:0019013	viral nucleocapsid
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004402	histone acetyltransferase activity