Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TCTCAAAAAGTTTCAAGCTTCAGAGAAATTTCAACAATGGAGGAAGAGAAAGCAGCGGCGTATTACGACGAGTTAACTCAGAAAGGAAGTGGCGCAGCCCGATTCAAGCAAGGACTCGGCTTCTCCTCATCCGCAACAACCACCACCTCCTCCAACGACCCACCATCAAGGGGTTCAGCCTTACCTTCTTCATCCTCATTTCTGAGCAATTTCGTCAGAGCTTCAAGCCCCACAAAGGAAAACGACATTGACAAGAAAACCCAGCTCGAGAATATCCAAAATAAGCTCAAAAAGAAGGCTCCCACAACCTCAATTGACGCCCCGAGTGAGGAAATTAGGGTTAGGGTTAGCCGGGATAGAAGGAGAAGCAGGAGCAGAGAGAGAGATAGGGAGAAGGATTCGAGGGAGGGGAGGAGTAGAAGTAGGAGCAGGGAGAGGAGGAGGGGGAGGAGTAGAAGTAGGAGCAGGAGCAGGGAAAGGAGGAGGGGTGGTGGTGGTGGGGATGATGAGGAGCGAGAGAGGCTAGGAAGGCGGCACCGTGGTTCGGGTAACGAGCGGAGTAGGGAGAGGAGGGGGAGAAGGAGGAGTAGGGAGAGAAGTTACTCTGATGATGAAAGAAGGTCTAGGAAGAGGAGGAGTAGGAGTTCTTCGCCGAGGGATCGAAGACGGTCCGAGAAAGGAAGAGAAGGTGGTGGAAAAGAAGGGAGAGTGATGAAGAAAGAGGGTAATGGTGTAGTTGATTATGCTATGTTAATTGATGGGTATAATAAGATGGTAAGTGGTTTATTATACTTAAAGAGCCATTTTTCAGTTTTGATTGAAACATTGCATTAGTTAGTCTTTTGTGATCATGATTAGTTGATTTATTTGCTTATTAATACTGCTTGTTCTTGTTGAATTCAGAACTTAAGATCTTTGATATTACTGCATTGTTTGTTTTGCTCAATTGGGTTTTTCGTTGTCTTTCTTTTTATTTGAGAACTTCAAGGAGTTCAAGGTGATACTCCATTTAGGGTTTGAATAAACTTTGCATAATGCGGGAGTTAATTTTCTTCCTTGTTGATTGATTTATCAGGGTTTTCTCAGCTGTTACTGATGTCTGAAGTATTAATTCAGTTTCTTCAGGTCTTCATGAAGCAGTAATATGCTTGAGTGACTTTTGTTCATAGTAGGTTTCTACCTCACACCTAATTGCAGTTGAATCCTTGCAACCTTCTAAAGCCTTGATCTTTGTCTCATTTGACATCCATGGAAATTTATCTATTGCTCAATGCGGGCATTGTTTAAGACTTAAGATTCTGCCATTTTTGAGTCTGATGTGTATGCATTTTGTAACAAGTTTCTTTGGCCAATTACCTTACTACATACCAACGAAAAGAAGCCTTTTTTTATGAACGGCTAGACAATGCATGTCACTTCCGGAGTTCCCCTACAATGAAATCAGCTTATAGGATGAACTCGCCCTAGCTCTATTTCGAATTCTCCACTCTATTCTTTTTATATATCACCTTATTTAGGTTGCTATTTTCAGGGCTTGACGTGGTCCTGGTTTTCTGCTTGTCTATAAGTCGTTGCTAGGATTTGGCCTGGTTATGGAGAGATTTGTTTATGAAGGAATAAGACTGGAACTATCAGTTATTTGCTTATCTATATTCCATGTTGCACCACTCTCTTAAGCCAGCAGGATAAGGTCCTTTGTTTTGCTAAATCAGTGTATACTCTCGACATTTTTCTTTTGTTTGATTGACCTTTTACATGATGTTACTTCCTCATTCTGTAGCCTTCAGTACTTTTGGTATATGGTGGATGAAATTAACTAAGCAAACGTATTAGGTTTCTCAGGAATTAGGTCAAATGATGAGTTCTATTTGTTTGATGGATGATTGCACTAGAGCAATCCATTTGACATCTGCGAGATGAGATCATGAGATTTCTTGATAAATCAGATTTTATAAAGGGTTAAAGCGCCAATTGTCTTCCTGAAACATCTCTGATAAGTAAGCCTGCTCTTTCATTAATGAGCATGGTCAGGGAATGGGGGCCGGGGTAATCTTACATTGTCTTCCTGCTATTTTCTATATGTATCTTCTGCCTCTTTGCATTAATATCTTTAGGAAATTTTTTTCATGTCATTGAGCAGTGTGAATGATATACTTCATTCTTCACTTGATTGTAATAGACACCTGCAGAAAGAGTCAAAGCTAAGATGAAACTTCAGCTTTCACAAACAGGTATTACCTGACTTCTGTTAGTTGTCTTAATCTTGGTCTGGATTAGTTTACTTGCCTGATATTAGCTGGTGTAGGAGTATGCATGAGAGTTGATTTTGTCTCCTCCTACACTTCAAAAGAAATTATGAACTGTCAATTACCTAGGGACTCTGAGACAGTAGTCACATGCACTAATGTACCAATCTAAGCTTCACTGATAATTATTCTCTCTCTTTTTTTTTTTGTCTATGTCATACGCCTTTACATATTTTACTATTAGCTATCGTTGGTTAGTAATCATATTGTATTATTTAAGGCACTTGTCATTGTTTGATGTCAAGGAATGTTACTTATGGCGTTATATCTTCCTATTCATATGTTTCTTCCTAATAGATCATTCCTAATATTTTTTTGACCTCCGGAACGTTGGCTGTGTCTGTATACAGTGTGCTGTATATTTAGTTAGAACTTTCAAATCGATATAAAGAAAAACAGGACCACCAACAGTCGATTTTTTCTTTATCAAAAGATGAAAATTCACCTTCTTGCTTTATCCTTTGTCGCTGCAATTGCACTTTTGAGAATAAGACCTGTCAGTGAACCTTGCAAGATATCCAGTCCAATTTCAGTTGACATCTAGGAAGGGTTTTTTTTCCTTTGTCGATGGTCTCTATGCTGATGAAAGCTTCTGTACCTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTCCCCCCCCCCCCCCCCCCCCCCGTCTTGTTGGACTCTTCTTTTCTATGACATCACATCAAATTCACCCAAGTAGTAAGTAATAAATCCCCCTAGAATTAGTATGGTGGGATTGCAACCTGGGTTTAGCTTTTTTTTACTGTCTCTTTGGGTGGGAAAACCAACAGCATCCGTGTGGATGATGAGAGACTGCACAAATCACAGGGAGAGAAGAATTGATGAAGATCGGTCCCGATTCCTCATGTGGTCCGCTGTGGGACCTTGGTTTAGTGATAGATATGTATTTCTTTATCTTCAGGATGATGCATATCTGTACCTAAAGGATTAAATTAAGAGACAGCCCAAATTAGAAAAGAGGGCAGTTTGTAGGACAGTAGGAGGGATTATTACTTCAGCCCTTAACACAATTCCTCGCCCCTTTTAGGTATGTTTTATAGAGTTCAGCTGCAAGGAATGTCGTACATGAAACAAATACCTGTCTGGTTAATGCATGATGAAATTGTTTCCCATTCAACCATAATAATGATCATCTAATCAATATTCTTTTGGCATCCATTTAAGATTTTTCACATCTATCCATTTTGGTGAAGTGGATTGGATGCGTCTGTTGGGGTGTTGTATTTTGATTCATATCCCTGTATGGTACAACTTAGCTGCTTTTTGAATTGTAGTGCTCTTTGTGAAACTCATTTCATGTTCATTTTCTTAGCAAAGCATTGCTACATGATTTGAGTGAGATTGGTATCTTGACATTGGAGAAACTTCAATTTTGCATAATCTCAGTACAGATATTGGGTGATCACATTTCACTGTTTTGTTGGACTTGATCTATAAGATGCATCGAGAGTAGACTATCTATTCTTTTCTAGAAGGATAATGTCCAGTTCATTATTTACTACAATAGATATTTGCAATTGACATGTTTTGTTAGCCTAAAGCTAATAAGTAATAAGTCATGTGTTCTGGGACATTAAATGGCCAAGAGATGTAATGAATGTCTGTCAGCCACATAGTTGTATTGAATCTTGATTACCAAGATAAATCTGCATTTCTCCAGACCTGGCCTTGGCCATAAGTACTACCTTGTTTTCCATATCCTATCCTGATAAGCAGTTTTGGCTGGGAAATCCAAGCTCAGACCTTGATCCTTGACTTTTGTGTTCATCGAAAATCCTTTTTACCCTGAGGCCATATAGAATTATAGATCATATATCTGAAATGATGGTTTAATGGGTTCCCGGACCCTATTGAAAGTCGGATAGCTCACTCCTTGGTGCGCCCTTGTTTATCCCAGCATTGGGTCCACGACTCCACAACCATCTGTTTTATCCAAAAGATAAAGTTTGATACTCCAAATTCCATGATGCCCAAGCATTCTTGAGATTTTGAACCCTTACATTTGGATTACACTTGGATAAGACTCATGCAGGTCTTGAATGCTAATCTTGTTTACCTTACCTCTAGCCTCGAAGGCTAAAAGGGGATAGGAAAGTTTTGGAGTTGTAGGGAAAAGATAGACTTGGAAAATATTAGTAACGAGATCAAATTATTGTTATAAACATCGTGTATGTGGTATAATGTTTGTAGTTATAGCTTAGGGGTCTGAGCTATCTCCTCATATTGTTTGAGTCTCTAAGTTGCTTGCAGTTGAATACAAGAATTTGATTTGTGTTTCTTTATTTTTCCTGCAGCTGAGAAGGATACTAAGATGGGTACTAGTTCACAATGGGAGCGGTTTGAATTTAACAAAGATGCCCCTGTAGATGATGAGGAAATTGAAGGTAAATGTATACTCTTTGATCGTCCAAAATTCAGGGACTCGATGTAGTGACAAAGGATGTTGGTTCTGCATCAGAGGCAGGCTCCAAGGATTGAAATTGATATATAATAGTTACTGTCTTGCGTTCTCTGTATGGATAATTTATTCTTGTAAAACACATGTTTTCTGAGCTTATTATTTGTTGTGCATATAGGAGGTTCCGCGGGAATGATATCCTCGTCTTCCTGTTATGTGCTATCATATATTTGATGTGAAGTTGTGTTTGTTAAGTCTAAGAGTGTATTTGTTTCCTGCCTGTAGCTGCTGATGATGATGTGGCACTGGTCAAGAATATTGGTAAAACCTTCCGGTTCAGATCTTTGGAGGTATGTTTGAATTGTGGTCATATTTCTGTTGTTTTTTGTCAGTAAAATCTTGAATCTGAAGATGAACCCAACTTTTATTTAAAGTATTGTCGCCTCTGTATTTCTTGTCACATTGAAGGCAAAAAGTGAGGATAAAATCAAGGATGCTCATGATGAGGCCATGTTTGGAGTCCCAGCTTCCGGTCCATCGTATGCAGCGGAAAGTGGAGAAGAGAGAGGGAGTGAGAATGAAAACGAAGAGATTAAAGATGACAACCCAGCTAGCGGTCTCATAAATGAGAAGGTAGGTTTCCCAAGTCAAACCACTTTCTAGTACACAGCCCTCCAAGGCACTCTCTAGGGTATATTGTTTTATTCAAAGAAAAGTGATATTTTGGCGAAAAAAACATGAATTCTGTAATCACATACAGGTACTTTCAAAGCAACAAGGTTCTTGGCGAGATCGCGCTCGCAGAAATGTTGGATGA TCTCAAAAAGTTTCAAGCTTCAGAGAAATTTCAACAATGGAGGAAGAGAAAGCAGCGGCGTATTACGACGAGTTAACTCAGAAAGGAAGTGGCGCAGCCCGATTCAAGCAAGGACTCGGCTTCTCCTCATCCGCAACAACCACCACCTCCTCCAACGACCCACCATCAAGGGGTTCAGCCTTACCTTCTTCATCCTCATTTCTGAGCAATTTCGTCAGAGCTTCAAGCCCCACAAAGGAAAACGACATTGACAAGAAAACCCAGCTCGAGAATATCCAAAATAAGCTCAAAAAGAAGGCTCCCACAACCTCAATTGACGCCCCGAGTGAGGAAATTAGGGTTAGGGTTAGCCGGGATAGAAGGAGAAGCAGGAGCAGAGAGAGAGATAGGGAGAAGGATTCGAGGGAGGGGAGGAGTAGAAGTAGGAGCAGGGAGAGGAGGAGGGGGAGGAGTAGAAGTAGGAGCAGGAGCAGGGAAAGGAGGAGGGGTGGTGGTGGTGGGGATGATGAGGAGCGAGAGAGGCTAGGAAGGCGGCACCGTGGTTCGGGTAACGAGCGGAGTAGGGAGAGGAGGGGGAGAAGGAGGAGTAGGGAGAGAAGTTACTCTGATGATGAAAGAAGGTCTAGGAAGAGGAGGAGTAGGAGTTCTTCGCCGAGGGATCGAAGACGGTCCGAGAAAGGAAGAGAAGGTGGTGGAAAAGAAGGGAGAGTGATGAAGAAAGAGGGTAATGGTGTAGTTGATTATGCTATGTTAATTGATGGGTATAATAAGATGACACCTGCAGAAAGAGTCAAAGCTAAGATGAAACTTCAGCTTTCACAAACAGCTGAGAAGGATACTAAGATGGGTACTAGTTCACAATGGGAGCGGTTTGAATTTAACAAAGATGCCCCTGTAGATGATGAGGAAATTGAAGCTGCTGATGATGATGTGGCACTGGTCAAGAATATTGGTAAAACCTTCCGGTTCAGATCTTTGGAGGCAAAAAGTGAGGATAAAATCAAGGATGCTCATGATGAGGCCATGTTTGGAGTCCCAGCTTCCGGTCCATCGTATGCAGCGGAAAGTGGAGAAGAGAGAGGGAGTGAGAATGAAAACGAAGAGATTAAAGATGACAACCCAGCTAGCGGTCTCATAAATGAGAAGGTACTTTCAAAGCAACAAGGTTCTTGGCGAGATCGCGCTCGCAGAAATGTTGGATGA ATGGAGGAAGAGAAAGCAGCGGCGTATTACGACGAGTTAACTCAGAAAGGAAGTGGCGCAGCCCGATTCAAGCAAGGACTCGGCTTCTCCTCATCCGCAACAACCACCACCTCCTCCAACGACCCACCATCAAGGGGTTCAGCCTTACCTTCTTCATCCTCATTTCTGAGCAATTTCGTCAGAGCTTCAAGCCCCACAAAGGAAAACGACATTGACAAGAAAACCCAGCTCGAGAATATCCAAAATAAGCTCAAAAAGAAGGCTCCCACAACCTCAATTGACGCCCCGAGTGAGGAAATTAGGGTTAGGGTTAGCCGGGATAGAAGGAGAAGCAGGAGCAGAGAGAGAGATAGGGAGAAGGATTCGAGGGAGGGGAGGAGTAGAAGTAGGAGCAGGGAGAGGAGGAGGGGGAGGAGTAGAAGTAGGAGCAGGAGCAGGGAAAGGAGGAGGGGTGGTGGTGGTGGGGATGATGAGGAGCGAGAGAGGCTAGGAAGGCGGCACCGTGGTTCGGGTAACGAGCGGAGTAGGGAGAGGAGGGGGAGAAGGAGGAGTAGGGAGAGAAGTTACTCTGATGATGAAAGAAGGTCTAGGAAGAGGAGGAGTAGGAGTTCTTCGCCGAGGGATCGAAGACGGTCCGAGAAAGGAAGAGAAGGTGGTGGAAAAGAAGGGAGAGTGATGAAGAAAGAGGGTAATGGTGTAGTTGATTATGCTATGTTAATTGATGGGTATAATAAGATGACACCTGCAGAAAGAGTCAAAGCTAAGATGAAACTTCAGCTTTCACAAACAGCTGAGAAGGATACTAAGATGGGTACTAGTTCACAATGGGAGCGGTTTGAATTTAACAAAGATGCCCCTGTAGATGATGAGGAAATTGAAGCTGCTGATGATGATGTGGCACTGGTCAAGAATATTGGTAAAACCTTCCGGTTCAGATCTTTGGAGGCAAAAAGTGAGGATAAAATCAAGGATGCTCATGATGAGGCCATGTTTGGAGTCCCAGCTTCCGGTCCATCGTATGCAGCGGAAAGTGGAGAAGAGAGAGGGAGTGAGAATGAAAACGAAGAGATTAAAGATGACAACCCAGCTAGCGGTCTCATAAATGAGAAGGTACTTTCAAAGCAACAAGGTTCTTGGCGAGATCGCGCTCGCAGAAATGTTGGATGA MEEEKAAAYYDELTQKGSGAARFKQGLGFSSSATTTTSSNDPPSRGSALPSSSSFLSNFVRASSPTKENDIDKKTQLENIQNKLKKKAPTTSIDAPSEEIRVRVSRDRRRSRSRERDREKDSREGRSRSRSRERRRGRSRSRSRSRERRRGGGGGDDEERERLGRRHRGSGNERSRERRGRRRSRERSYSDDERRSRKRRSRSSSPRDRRRSEKGREGGGKEGRVMKKEGNGVVDYAMLIDGYNKMTPAERVKAKMKLQLSQTAEKDTKMGTSSQWERFEFNKDAPVDDEEIEAADDDVALVKNIGKTFRFRSLEAKSEDKIKDAHDEAMFGVPASGPSYAAESGEERGSENENEEIKDDNPASGLINEKVLSKQQGSWRDRARRNVG Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo27269.1 vs. NCBI nr
Match: gi|902205076|gb|KNA15083.1| (hypothetical protein SOVF_101530 [Spinacia oleracea]) HSP 1 Score: 675.6 bits (1742), Expect = 5.100e-191 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1
BLAST of Spo27269.1 vs. NCBI nr
Match: gi|731335320|ref|XP_010678667.1| (PREDICTED: zinc finger CCCH domain-containing protein 13 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 456.4 bits (1173), Expect = 4.800e-125 Identity = 292/397 (73.55%), Postives = 327/397 (82.37%), Query Frame = 1
BLAST of Spo27269.1 vs. NCBI nr
Match: gi|719965069|ref|XP_010255370.1| (PREDICTED: serine/threonine-protein kinase fray2 [Nelumbo nucifera]) HSP 1 Score: 295.4 bits (755), Expect = 1.400e-76 Identity = 227/397 (57.18%), Postives = 276/397 (69.52%), Query Frame = 1
BLAST of Spo27269.1 vs. NCBI nr
Match: gi|595847186|ref|XP_007209273.1| (hypothetical protein PRUPE_ppa007499mg [Prunus persica]) HSP 1 Score: 290.8 bits (743), Expect = 3.500e-75 Identity = 216/388 (55.67%), Postives = 271/388 (69.85%), Query Frame = 1
BLAST of Spo27269.1 vs. NCBI nr
Match: gi|645268785|ref|XP_008239694.1| (PREDICTED: serine/threonine-protein kinase fray2 [Prunus mume]) HSP 1 Score: 290.4 bits (742), Expect = 4.600e-75 Identity = 210/385 (54.55%), Postives = 262/385 (68.05%), Query Frame = 1
BLAST of Spo27269.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6F3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_101530 PE=4 SV=1) HSP 1 Score: 675.6 bits (1742), Expect = 3.500e-191 Identity = 388/388 (100.00%), Postives = 388/388 (100.00%), Query Frame = 1
BLAST of Spo27269.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CEQ8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g116070 PE=4 SV=1) HSP 1 Score: 456.4 bits (1173), Expect = 3.400e-125 Identity = 292/397 (73.55%), Postives = 327/397 (82.37%), Query Frame = 1
BLAST of Spo27269.1 vs. UniProtKB/TrEMBL
Match: M5W9Q0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007499mg PE=4 SV=1) HSP 1 Score: 290.8 bits (743), Expect = 2.400e-75 Identity = 216/388 (55.67%), Postives = 271/388 (69.85%), Query Frame = 1
BLAST of Spo27269.1 vs. UniProtKB/TrEMBL
Match: W9SXQ7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_004738 PE=4 SV=1) HSP 1 Score: 288.9 bits (738), Expect = 9.300e-75 Identity = 228/407 (56.02%), Postives = 278/407 (68.30%), Query Frame = 1
BLAST of Spo27269.1 vs. UniProtKB/TrEMBL
Match: A0A067KFX7_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11536 PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 3.500e-74 Identity = 213/391 (54.48%), Postives = 266/391 (68.03%), Query Frame = 1
BLAST of Spo27269.1 vs. TAIR (Arabidopsis)
Match: AT3G48120.1 (unknown protein) HSP 1 Score: 230.7 bits (587), Expect = 1.500e-60 Identity = 191/392 (48.72%), Postives = 240/392 (61.22%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo27269.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo27269.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo27269.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo27269.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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