Spo27360.1 (mRNA) | SpinachBase

Overview


Name	Spo27360.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Oxygen-evolving enhancer protein 3-1, chloroplastic
Location	chr4 : 95659518 .. 95665358 (-)
Sequence length	2373

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGAAACTAAACAAATGGACAAAGAATGACATTGAAATGTTGCCCCTAGAATTTACAAAACTACCCACAACATGTACAACAATTTGGGTGGCCAATAATACCCAAAAACTCATCCCAAAAAATCACAAACTCATAAGAAAATAAAAAATAATATCCATTTCTTCTAATCTTCATTCATTCAAACTCAAAAAAAAAAGCTCTAACCTCATGGCTCAATTGGGAAACTTATATGTTCCCAACATTTTAAGGACACCTACAAAATCATGCTTAACTAAATGCCATGCCAAAAAGTTTGAGGAATTTCATCAAAATGAGCAACAATCTTCATCTTTGGCATTCAAAAATAATACATCAAGAAGGTCAGTCATAAGCATTGCTTCCATTGCTCTACTTACTCAAATTGGTACTAATAATGCTTCTTTGGCCGAGGAAGAAAATCAGTTGTGGCTCGATGGCCCTCTTCCCGGATTACGTCCGGCCGAAAATAGTAAGTATATATTATGTCTTTCAAGTTTTAAGTCGGTATAATTTCGTTTCAAAATGATTTTTATACTTTTCGTTTTATAATTTTCTTTATATTGTGCTTTATACTATTTTTTGACATGAAAATTTACCATTTTATCTCTATTACGGAGTATTCCACAATCTTTACAGTTTTCCACTCAATTTCTCTTACTTTATCAATTTTTTTTTCTTACACTCACCCATCTTTTAACACATTTTTCTTAATTTATCCACATTTTATTATATTCATCTACTTTTTTACACATTATTTCTCCTTTGTCTTGACATTTTTGCACATAATAAGTGTAAAAGATCATTTTGAAAGATAGTATGTTATACATGTGCTCCTTATGACCAACCCCTCCCCAATAAAGATGGACATGGGCCAGGTCGGGCTTTGGGCCGAGCCCATGGGTCATGGGTCTAACCGGGGTGGGCCCATGGAAGGCCCACATTGTAACGGGCCGGGCCGAAAAGTTTAAAACAAGGTCTAAGTCCACGGGCTTTCGTGCCGGGTCGGTCCGACCCGTCGTGCCTAAGTCAAATTTTACTAAATTTAGCGTGTTTTGTCGTGCCGTGCCTTGTCTTACGTTTTCCAAAAAAAACTAAGGCACAAACCCGGCCCACGACCCACTTTTTCGTGCCCGTGCCGGACCGTGCTTTTTTGGAGCTCGGGTCTGGCGGGCCGGCCCAGCGCACAACCATCTTTACTCCCCAATGATAAATCCGTCTTAGAGATATTTTATCTAATGTACTCCGTAGGTGGTAAAAGTATATTTTGGGTATATAAATAAAAGGGCGTCTAGGGTAAAATTTTAAAATAAAAATACTCGAGATTGATCAAATGATAAAAAAAAAATACGAGATTGGTCTAATATAAAGATAATATATTTAAAGAACTACGCATTATTTTAAGTTGCCAAAGCGATTCCTTTTTGACAATTGATATCGTAATCTACTCTAACAACAACTATTGAACACCTAATCAAAATGTTTTAAAAAATAGGACTAGTTGGTTCAATTATAATATTGATGTCAAATAGTGGAGCCAAATCCAATACTTGTATAAATAATTGCTTGATCATGAGTAGTGTTAAAAAGATAAGTGACAAAAAGCTACACAACATTTGAATTATTCAATAGCAATTGATCAAATTGATATCAATACAACGTTACGCAAATTAGAATATGGACATATGTGTACGATGCTCACCATGTTAAATAATGTCTTGAATCGGTTAAGCCCCTTACTGCAATGCCCCAGTACGGTTATATAAACTCTCTAGGTCCTAACTTAGTTGTATTCTGAAATCTGTACTCCTCAAGATCAATAAAACATTCATACCCTCTGTCTGTGGACGTAGCTAACACATTGTTAGTGAATCACGTTAAATTCTCTGCGTTCTTTATTACGTTATTTATTCTTTATTTGCATCCGTTATAACACACCATGTACCAAAAGAACATAAATACGCATGTAAAATAACACCACAATGTGAGACTAGTTCGTTTCTTTTTCTCCATCATGGAAATGATGATCACATACTTTTTTTCAAGTTTGTCATGGATATGTACTCCCTCCGTCCTTTAATACTCGCATCGGTTTGACCGGGTGCGGAGTTTAAGACACTTGAATTGACTTATTAATTTAATAGTGTTAGTTGATAGTGGAGTATTTTTTTAATATAGTTAGTGGGAAATTGGTAAGGGATGGGGAGTGGTGAGTGGGATATGTGAATTTTCAAATGATTTTTTTGTAGGGAATAGTGGTGTAGGTGGGTTAGTAGGTAAGTGTGAGAAATAATATAATGTTGGTAAGAATTTTCATTTATAGAAACGCTGCAAGTATTAAGGGACGGCCCGAAAAGGAAAGCGGTGCGAGTATTAAGGGACGGAGGGAGTACATAGGATTCTCCAAAATACACCGGATATACACCAAATGGTACATCTTAGATACGTACCTAATCGCCCTCAGATCAAATTACATGGATTTGTACACAAGAAAAAACATACTTAGGAGTAAACAAAGAGCTATTTAAATATTTATGATGGTATAATGGGAATTAACATTGGATAAATAAGAAAAGATTCTAAAAGAGACTAATAAAAAAAAGCAATACGGAAAGAGGACTAACATTCCATAACGGAAGGAATAGAGAAATTCCGAGTTAATCTCAGTGATTGGAAATTTTTTCCAATCAAATGACATTTTCGTAAATATTTTGAAAACTGTAGGTGGTATAATGTCAGGCGTTGACTGTATATTTGTAATTATTGACTGCATATTACTCAGTGTTGATGGTATACCACTTGTCGTAGATTGTAAATTATTTTATGATTGCTGATGAATTACTAAATGCAATATTGTTTATTGATAAGTGATTGACTGTATATTTAGTTGTATATTGTTTATTAGTAAAATTTTGTTGTATATTGTGAGTTGTTGATTGTATATTATATAGTTGTTGAAATATTATAAAAATACAATAATGATCGTACATGTGGCCCACATTTCATGACATGTCATTGTACTTTAACCCCCATTTAATAACATTTTCGCAATAAAATCATCAATTATTTACGAAAATGCCATTTGATTGGGGAAATTTCCCGATCACTAAGATTAATTCGGAACGGCTCGAAGGAATAGGTTTTATGTTGGGTTTAACTTAGCTAAGTCGGCAATGGTTTTACTGCAGAAATTGGCAACGAAGAAACAGGAACAAGGACATTTCTGAAGAAGGGAATTTACATGGCTAACATTGGAACAAAAGGAAGTGCATTAAGGCTTAGGAAATATGCCTTTGATCTGTTGGCAATGGAAGATTTAATAGGCCAAGATACCTTGAATTACGTCCGAAGGTACCTCCGATTTAAGGGCACCTTCATGTACTATGATTTCGACAAGGTTATCTCTGCTGCCCCTGTTGCTGATAAACCTCCTCTCACTAACCTTGCCAACAGACTCTTCGACAATTTCGAAAAGGTAAACAAACAATCAAATAATCAAGATAAAGTCATTTCCCATTGTAGACCTGATCATCATGGCCCGGCCTGTAAAATAGCGAGTTTTTAATTGGTATAAGGTACACCCGGTTGTATGTAGAGTAGAGCTACATGCAACCGAGTTGTTTTGAATTTTTACTCCTTTAGAAAGCACTTTTGTAGTGTTTAAATGCACATATTAACCATTTTTACATACAACCGGGTGTACCTTATAATTTGTGCTTTAAATGCACATATTAACCATTAAAATCACATTTTTACACAAAAAGTACATCCGCTTCACAAAAAACAAAAAATATGTGCTTTTAAACTATAAAATGTGCTTTTAAATGTTTTTAACCTGGTTGTGTTGCCTATAGAGCTACATACAACCGGGTGCACCTTCTAATTTGTGGCGAGGTTTGGCCAAAATTTTCAAGCCTGACCCAATTTTTTAATTTTTTTGATGGGTTTTGGATAACTCAAAAGTGCATTTTTAGTTATAAATTTAGCACAACCCAAATGCCCCCAAAAGCCCGCTATTTTCGACCCAAAATAGCGGGTTTGGAGCAGAAACTTCCGGCCCGGAGTTTGTCCTGGTCTGACCCAGCATGACCTACTGAACAAAAAAATTAAGTCATGGCCCGGCTCAGCCCGGCCCACAATTTGATCAGGTCTAACTGTCTAAGCCATTGCAATTTAAACTTCCGTCCTTTTTACCAGTTGAAGTTGAAGATTTTATTGTTCTTGCAGCTTCAAGAAGCTGTGAAGCTCAAGGATGTACCTCTAACACGATCTTGCTACGACGACACAGCAGTCACTCTCCAAGAGGTGATGAACAGAATGGCATAACAGTCTGCAGATATTTCTTTTTTTATCATCCTGTTATTGTACAAGTAATTTCTGAGAAATGAACATACTACTATTAAGCAAGATAGAGATCGTCGAAAAAAAATTCCAGCGAAAAATACAAGAATAGAAAGAATTAGGATTATAAATAAATACACCTGAGGGGAAAAAAATAAAATCAACCTCAGTGTTAATGTATGTATTGATCATTAATTAATTAATTAATTAATTAATTAATACAACTGTGGCCAAAGTTTCCACTCCCAGAAATTACAAATTCATAACATTTCCTCCATTTTTACTAATCACTATACAAAATCATTCCTCGCCTACGTTAGAATCATCAATCGATCTTTCTGTTCTTCGTTCTTCTTCGTTCTTTGTTCTTCTAGTCTTTATTTTTTTTCGCTTAAGAGGGTGATGATGATTAGCCAAGAAAATACAAAATACACAACCTGCTATACCACAGGAACAAAGCTGACCTTCATGGCTCAGAAAATCAGCCATAGCTCAGACGCGAGTCTGAGGACCGCACATTGGTTTGACGTCGAGGAATACCAATCTCACAAGCATTGACTCGGGCTGCAAACCGGAGAGAACACAATGACTCGCCCAACGAAGAGGATTCGGGAGAGATGTTAACAAACATCAAGGTCTTCGAGTCCCCACCAAGGCAAGGCTATTCCACAATTGAGCAGATGATAATCAAACACCATTCGTTAAATTTAAGATTAGAGAATAACCCAACCAATTAAGAAAATTACACAAACTGCTTGTTTAGGTTTTGTTCTATTCACCTGATTTCACTTATTTTTCCTGAATTTATCTTATCTGAACTTAACTAAACTTATTAAAACTTATTTTAGTTATAAATTGTTTTGCCAACCCTTATTTTCCCTGAACTTAACTGATAGTTCCTGAAATAAGTGGAAATAAGGTGAATACAACATAGCCTTAATAATCTAAGTAACATTTGTGCGTCTCAGTGACCAACACACATTCCATGCAGGTTACGTTGTTGCCTACTTCTCCCTCCATTCCAAAAAGACTGCTTAAACGTTACACGCATATAGTAAGAAGTTCTTACTTCTTGCAATTGATTTCTAGAAACTAACAAATATTGCACTGACAAATTATAATAATAGTGTATTAATATTTTAAGTGATGGATGGAAGAAGCATATCTCTAGACTCGTTATCCTTCCGATACTCCGAACTCAGAAAGCTAACAAAACTCAGAACCAACAAGGGATTTCTGCCTAAAATTTAATTGTATCAAGATTTTCCGGTATACTCCCTCCGTATTTTAAAAAGAGATACGCTTTCCTTAAACGGTCGTATTTTAAAAAGAGATACACTTTACTTTTTTGACATGTTTCTCTCTTTCTTGTGGTCCCCACACTTACTCACATCATATTTTTACTAAAATAAATAATTCAATCACTACCCCCACTTTCATCTTATTTTAATAAATTCAACTCACTCTCCTAAAACTATGTGCCG

mRNA sequence

CTTGAAACTAAACAAATGGACAAAGAATGACATTGAAATGTTGCCCCTAGAATTTACAAAACTACCCACAACATGTACAACAATTTGGGTGGCCAATAATACCCAAAAACTCATCCCAAAAAATCACAAACTCATAAGAAAATAAAAAATAATATCCATTTCTTCTAATCTTCATTCATTCAAACTCAAAAAAAAAAGCTCTAACCTCATGGCTCAATTGGGAAACTTATATGTTCCCAACATTTTAAGGACACCTACAAAATCATGCTTAACTAAATGCCATGCCAAAAAGTTTGAGGAATTTCATCAAAATGAGCAACAATCTTCATCTTTGGCATTCAAAAATAATACATCAAGAAGGTCAGTCATAAGCATTGCTTCCATTGCTCTACTTACTCAAATTGGTACTAATAATGCTTCTTTGGCCGAGGAAGAAAATCAGTTGTGGCTCGATGGCCCTCTTCCCGGATTACGTCCGGCCGAAAATAAAATTGGCAACGAAGAAACAGGAACAAGGACATTTCTGAAGAAGGGAATTTACATGGCTAACATTGGAACAAAAGGAAGTGCATTAAGGCTTAGGAAATATGCCTTTGATCTGTTGGCAATGGAAGATTTAATAGGCCAAGATACCTTGAATTACGTCCGAAGGTACCTCCGATTTAAGGGCACCTTCATGTACTATGATTTCGACAAGGTTATCTCTGCTGCCCCTGTTGCTGATAAACCTCCTCTCACTAACCTTGCCAACAGACTCTTCGACAATTTCGAAAAGCTTCAAGAAGCTGTGAAGCTCAAGGATGTACCTCTAACACGATCTTGCTACGACGACACAGCAGTCACTCTCCAAGAGGTGATGAACAGAATGGCATAACAGTCTGCAGATATTTCTTTTTTTATCATCCTGTTATTGTACAAGTAATTTCTGAGAAATGAACATACTACTATTAAGCAAGATAGAGATCGTCGAAAAAAAATTCCAGCGAAAAATACAAGAATAGAAAGAATTAGGATTATAAATAAATACACCTGAGGGGAAAAAAATAAAATCAACCTCAGTGTTAATGTATGTATTGATCATTAATTAATTAATTAATTAATTAATTAATACAACTGTGGCCAAAGTTTCCACTCCCAGAAATTACAAATTCATAACATTTCCTCCATTTTTACTAATCACTATACAAAATCATTCCTCGCCTACGTTAGAATCATCAATCGATCTTTCTGTTCTTCGTTCTTCTTCGTTCTTTGTTCTTCTAGTCTTTATTTTTTTTCGCTTAAGAGGGTGATGATGATTAGCCAAGAAAATACAAAATACACAACCTGCTATACCACAGGAACAAAGCTGACCTTCATGGCTCAGAAAATCAGCCATAGCTCAGACGCGAGTCTGAGGACCGCACATTGGTTTGACGTCGAGGAATACCAATCTCACAAGCATTGACTCGGGCTGCAAACCGGAGAGAACACAATGACTCGCCCAACGAAGAGGATTCGGGAGAGATGTTAACAAACATCAAGGTCTTCGAGTCCCCACCAAGGCAAGGCTATTCCACAATTGAGCAGATGATAATCAAACACCATTCGTTAAATTTAAGATTAGAGAATAACCCAACCAATTAAGAAAATTACACAAACTGCTTGTTTAGGTTTTGTTCTATTCACCTGATTTCACTTATTTTTCCTGAATTTATCTTATCTGAACTTAACTAAACTTATTAAAACTTATTTTAGTTATAAATTGTTTTGCCAACCCTTATTTTCCCTGAACTTAACTGATAGTTCCTGAAATAAGTGGAAATAAGGTGAATACAACATAGCCTTAATAATCTAAGTAACATTTGTGCGTCTCAGTGACCAACACACATTCCATGCAGGTTACGTTGTTGCCTACTTCTCCCTCCATTCCAAAAAGACTGCTTAAACGTTACACGCATATAGTAAGAAGTTCTTACTTCTTGCAATTGATTTCTAGAAACTAACAAATATTGCACTGACAAATTATAATAATAGTGTATTAATATTTTAAGTGATGGATGGAAGAAGCATATCTCTAGACTCGTTATCCTTCCGATACTCCGAACTCAGAAAGCTAACAAAACTCAGAACCAACAAGGGATTTCTGCCTAAAATTTAATTGTATCAAGATTTTCCGGTATACTCCCTCCGTATTTTAAAAAGAGATACGCTTTCCTTAAACGGTCGTATTTTAAAAAGAGATACACTTTACTTTTTTGACATGTTTCTCTCTTTCTTGTGGTCCCCACACTTACTCACATCATATTTTTACTAAAATAAATAATTCAATCACTACCCCCACTTTCATCTTATTTTAATAAATTCAACTCACTCTCCTAAAACTATGTGCCG

Coding sequence (CDS)

ATGGCTCAATTGGGAAACTTATATGTTCCCAACATTTTAAGGACACCTACAAAATCATGCTTAACTAAATGCCATGCCAAAAAGTTTGAGGAATTTCATCAAAATGAGCAACAATCTTCATCTTTGGCATTCAAAAATAATACATCAAGAAGGTCAGTCATAAGCATTGCTTCCATTGCTCTACTTACTCAAATTGGTACTAATAATGCTTCTTTGGCCGAGGAAGAAAATCAGTTGTGGCTCGATGGCCCTCTTCCCGGATTACGTCCGGCCGAAAATAAAATTGGCAACGAAGAAACAGGAACAAGGACATTTCTGAAGAAGGGAATTTACATGGCTAACATTGGAACAAAAGGAAGTGCATTAAGGCTTAGGAAATATGCCTTTGATCTGTTGGCAATGGAAGATTTAATAGGCCAAGATACCTTGAATTACGTCCGAAGGTACCTCCGATTTAAGGGCACCTTCATGTACTATGATTTCGACAAGGTTATCTCTGCTGCCCCTGTTGCTGATAAACCTCCTCTCACTAACCTTGCCAACAGACTCTTCGACAATTTCGAAAAGCTTCAAGAAGCTGTGAAGCTCAAGGATGTACCTCTAACACGATCTTGCTACGACGACACAGCAGTCACTCTCCAAGAGGTGATGAACAGAATGGCATAA

Protein sequence

MAQLGNLYVPNILRTPTKSCLTKCHAKKFEEFHQNEQQSSSLAFKNNTSRRSVISIASIALLTQIGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLKKGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISAAPVADKPPLTNLANRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo27360	Spo27360	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo27360.1	Spo27360.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27360.1.utr5p.1	Spo27360.1.utr5p.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27360.1.CDS.3	Spo27360.1.CDS.3	CDS
Spo27360.1.CDS.2	Spo27360.1.CDS.2	CDS
Spo27360.1.CDS.1	Spo27360.1.CDS.1	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27360.1.utr3p.1	Spo27360.1.utr3p.1	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo27360.1.exon.3	Spo27360.1.exon.3	exon
Spo27360.1.exon.2	Spo27360.1.exon.2	exon
Spo27360.1.exon.1	Spo27360.1.exon.1	exon

Homology

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BLAST of Spo27360.1 vs. NCBI nr
Match: gi|902205736|gb|KNA15248.1| (hypothetical protein SOVF_099950 [Spinacia oleracea])

HSP 1 Score: 441.4 bits (1134), Expect = 9.100e-121
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1


		  
Query: 1   MAQLGNLYVPNILRTPTKSCLTKCHAKKFEEFHQNEQQSSSLAFKNNTSRRSVISIASIA 60
           MAQLGNLYVPNILRTPTKSCLTKCHAKKFEEFHQNEQQSSSLAFKNNTSRRSVISIASIA
Sbjct: 1   MAQLGNLYVPNILRTPTKSCLTKCHAKKFEEFHQNEQQSSSLAFKNNTSRRSVISIASIA 60

Query: 61  LLTQIGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLKKGIYMANIGTKGS 120
           LLTQIGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLKKGIYMANIGTKGS
Sbjct: 61  LLTQIGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLKKGIYMANIGTKGS 120

Query: 121 ALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISAAPVADKPPLTNLA 180
           ALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISAAPVADKPPLTNLA
Sbjct: 121 ALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISAAPVADKPPLTNLA 180

Query: 181 NRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 222
           NRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA
Sbjct: 181 NRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 221

[Close]

BLAST of Spo27360.1 vs. NCBI nr
Match: gi|731364972|ref|XP_010694269.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 321.2 bits (822), Expect = 1.400e-84
Identity = 174/235 (74.04%), Postives = 189/235 (80.43%), Query Frame = 1


		  
Query: 1   MAQLGNLY------------VPNILRTPTKSC-LTKCHAKKFEEFHQNEQQSSSLAFKNN 60
           MA+L NLY             PNI RTP+KSC + KC AK FE F Q EQQ SSLA K N
Sbjct: 1   MARLANLYGVTESLPAAIPKTPNIQRTPSKSCRIIKCQAKMFENFDQFEQQCSSLALK-N 60

Query: 61  TSRRSVISIASIALLTQIGT-NNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFL 120
           T+RRSV+ IASIALL Q+ T NN SLA EENQLWL GPLPGL PAENKI NEETGTRTFL
Sbjct: 61  TTRRSVLGIASIALLAQLDTNNNDSLAVEENQLWLTGPLPGLPPAENKIFNEETGTRTFL 120

Query: 121 KKGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVIS 180
           KKGIYMANIGTKGSA RLRKYAFDL+A+ DLI QDT NYVRRYLR KGTFMYYDFDKVIS
Sbjct: 121 KKGIYMANIGTKGSAHRLRKYAFDLMALGDLITQDTFNYVRRYLRLKGTFMYYDFDKVIS 180

Query: 181 AAPVADKPPLTNLANRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 222
           A+ V DK PLT+LANRLFDNFEKLQ+AVKLKD+P T+SCY+ T V LQEVM+RMA
Sbjct: 181 ASSVPDKQPLTDLANRLFDNFEKLQDAVKLKDLPQTQSCYNKTTVILQEVMDRMA 234

[Close]

BLAST of Spo27360.1 vs. NCBI nr
Match: gi|694353220|ref|XP_009358084.1| (PREDICTED: psbQ-like protein 2, chloroplastic [Pyrus x bretschneideri])

HSP 1 Score: 223.8 bits (569), Expect = 3.000e-55
Identity = 122/212 (57.55%), Postives = 150/212 (70.75%), Query Frame = 1


		  
Query: 10  PNILRTPTKSCLTKCHAKKFEEFHQNEQQSSSLAFKNNTSRRSVISIASIALLTQIGTNN 69
           P++  T  K+ +     KK ++F +   Q         T+RR  + +AS+AL+     N 
Sbjct: 21  PSVQTTRKKASIICFTGKKSDDFQEQPLQ---------TTRRIALGLASVALVGNF-CNG 80

Query: 70  ASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLKKGIYMANIGTKGSALRLRKYAF 129
            SLAE  N  WLDGPLP +  A+NKI NE+TGTR+FLK+G+YMANIGTKG   RL+KYAF
Sbjct: 81  VSLAEG-NGFWLDGPLP-VPSAQNKIANEKTGTRSFLKRGLYMANIGTKGRKFRLKKYAF 140

Query: 130 DLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISAAPVADKPPLTNLANRLFDNFEK 189
           DLLAM DLI +DTLNYVRRYLR K TFMY+DFD+VISAAPV +K PLT+LANRLFD  EK
Sbjct: 141 DLLAMADLIAKDTLNYVRRYLRLKSTFMYFDFDQVISAAPVDEKQPLTDLANRLFDTVEK 200

Query: 190 LQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 222
           L  AVK +D+P T + Y DT V LQEVM+RMA
Sbjct: 201 LDGAVKQRDLPRTETYYKDTTVVLQEVMDRMA 220

[Close]

BLAST of Spo27360.1 vs. NCBI nr
Match: gi|703083809|ref|XP_010092309.1| (Oxygen-evolving enhancer protein 3-1 [Morus notabilis])

HSP 1 Score: 223.0 bits (567), Expect = 5.100e-55
Identity = 120/217 (55.30%), Postives = 154/217 (70.97%), Query Frame = 1


		  
Query: 5   GNLYVPNILRTPTKSCLTKCHAKKFEEFHQNEQQSSSLAFKNNTSRRSVISIASIALLTQ 64
           G L +P++ RT  ++ +     KK ++  Q+E    +      T R+  + +ASIAL+  
Sbjct: 16  GALRLPSLRRTQKRANIVGFQGKKKDDHSQSEHNVQT------TRRKLALGLASIALVGN 75

Query: 65  IGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLKKGIYMANIGTKGSALRL 124
              N  SLAE+ N  W+DGPLP +   +N I NE+TGTR+FLKKGIYMA+IGTK    RL
Sbjct: 76  TTCNGVSLAED-NGFWIDGPLP-VPTVDNNIANEKTGTRSFLKKGIYMADIGTKNRKYRL 135

Query: 125 RKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISAAPVADKPPLTNLANRLF 184
           RK AFDLLA+EDLIG+DTLNYV++YLR K TFMYYDFDKVI+AA V DK PLT+LANRLF
Sbjct: 136 RKCAFDLLALEDLIGKDTLNYVQKYLRLKSTFMYYDFDKVITAATVDDKQPLTHLANRLF 195

Query: 185 DNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 222
           D+FEKL+ A K +++P T + Y DT V LQEVM+RMA
Sbjct: 196 DSFEKLEGATKQRNLPETETFYKDTKVILQEVMDRMA 224

[Close]

BLAST of Spo27360.1 vs. NCBI nr
Match: gi|1009110877|ref|XP_015898087.1| (PREDICTED: photosynthetic NDH subunit of lumenal location 3, chloroplastic-like [Ziziphus jujuba])

HSP 1 Score: 220.3 bits (560), Expect = 3.300e-54
Identity = 125/213 (58.69%), Postives = 150/213 (70.42%), Query Frame = 1


		  
Query: 9   VPNILRTPTKSCLTKCHAKKFEEFHQNEQQSSSLAFKNNTSRRSVISIASIALLTQIGTN 68
           +P+I RT  +        KK ++    + Q  SL     T+RR  + +ASI L+     N
Sbjct: 20  LPSIRRTQKRVKKIGFLCKKTDD----DSQQHSL----QTTRRLALGLASITLVGN-SCN 79

Query: 69  NASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLKKGIYMANIGTKGSALRLRKYA 128
             SLAEE N+ WLDGPLP +    N I NE+TGTR+FLKKG+Y+A+I TKG   RLRKYA
Sbjct: 80  GVSLAEE-NRFWLDGPLP-VPSVYNNIANEKTGTRSFLKKGVYIADIPTKGRMYRLRKYA 139

Query: 129 FDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISAAPVADKPPLTNLANRLFDNFE 188
           FDLLAMEDLIGQDTLNYV++YLR K TFMYYDFDKVISAAPV DK PLTNLANRLFDN E
Sbjct: 140 FDLLAMEDLIGQDTLNYVQKYLRLKSTFMYYDFDKVISAAPVDDKQPLTNLANRLFDNVE 199

Query: 189 KLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 222
           KL +A K +++  T + Y DT V LQEVM+RMA
Sbjct: 200 KLDDAAKQRNLTQTETFYKDTKVILQEVMDRMA 221

[Close]

BLAST of Spo27360.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R6W0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_099950 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 6.400e-121
Identity = 221/221 (100.00%), Postives = 221/221 (100.00%), Query Frame = 1


		  
Query: 1   MAQLGNLYVPNILRTPTKSCLTKCHAKKFEEFHQNEQQSSSLAFKNNTSRRSVISIASIA 60
           MAQLGNLYVPNILRTPTKSCLTKCHAKKFEEFHQNEQQSSSLAFKNNTSRRSVISIASIA
Sbjct: 1   MAQLGNLYVPNILRTPTKSCLTKCHAKKFEEFHQNEQQSSSLAFKNNTSRRSVISIASIA 60

Query: 61  LLTQIGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLKKGIYMANIGTKGS 120
           LLTQIGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLKKGIYMANIGTKGS
Sbjct: 61  LLTQIGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLKKGIYMANIGTKGS 120

Query: 121 ALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISAAPVADKPPLTNLA 180
           ALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISAAPVADKPPLTNLA
Sbjct: 121 ALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISAAPVADKPPLTNLA 180

Query: 181 NRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 222
           NRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA
Sbjct: 181 NRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 221

[Close]

BLAST of Spo27360.1 vs. UniProtKB/TrEMBL
Match: A0A0J8E5R6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g092210 PE=4 SV=1)

HSP 1 Score: 321.2 bits (822), Expect = 9.600e-85
Identity = 174/235 (74.04%), Postives = 189/235 (80.43%), Query Frame = 1


		  
Query: 1   MAQLGNLY------------VPNILRTPTKSC-LTKCHAKKFEEFHQNEQQSSSLAFKNN 60
           MA+L NLY             PNI RTP+KSC + KC AK FE F Q EQQ SSLA K N
Sbjct: 1   MARLANLYGVTESLPAAIPKTPNIQRTPSKSCRIIKCQAKMFENFDQFEQQCSSLALK-N 60

Query: 61  TSRRSVISIASIALLTQIGT-NNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFL 120
           T+RRSV+ IASIALL Q+ T NN SLA EENQLWL GPLPGL PAENKI NEETGTRTFL
Sbjct: 61  TTRRSVLGIASIALLAQLDTNNNDSLAVEENQLWLTGPLPGLPPAENKIFNEETGTRTFL 120

Query: 121 KKGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVIS 180
           KKGIYMANIGTKGSA RLRKYAFDL+A+ DLI QDT NYVRRYLR KGTFMYYDFDKVIS
Sbjct: 121 KKGIYMANIGTKGSAHRLRKYAFDLMALGDLITQDTFNYVRRYLRLKGTFMYYDFDKVIS 180

Query: 181 AAPVADKPPLTNLANRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 222
           A+ V DK PLT+LANRLFDNFEKLQ+AVKLKD+P T+SCY+ T V LQEVM+RMA
Sbjct: 181 ASSVPDKQPLTDLANRLFDNFEKLQDAVKLKDLPQTQSCYNKTTVILQEVMDRMA 234

[Close]

BLAST of Spo27360.1 vs. UniProtKB/TrEMBL
Match: A0A0F7CYJ0_9ROSI (Photosynthetic NDH subcomplex L 3 OS=Melianthus villosus GN=1 PE=2 SV=1)

HSP 1 Score: 240.0 bits (611), Expect = 2.800e-60
Identity = 121/174 (69.54%), Postives = 141/174 (81.03%), Query Frame = 1


		  
Query: 48  TSRRSVISIASIALLTQIGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLK 107
           T+RR  +S+ASIA+  Q  + + SLAE+ N  WL GPLPGL P  NKI NE+TGTR+FLK
Sbjct: 37  TTRRLALSLASIAIF-QHSSTSVSLAED-NGYWLTGPLPGLPPINNKIANEKTGTRSFLK 96

Query: 108 KGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISA 167
            G+YMA+IGTKGSA RLRKYAFDL+AMEDLIGQDTLNYVR+YLR K TFMYYDFD VISA
Sbjct: 97  NGLYMASIGTKGSAFRLRKYAFDLMAMEDLIGQDTLNYVRKYLRLKSTFMYYDFDNVISA 156

Query: 168 APVADKPPLTNLANRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 222
           A   DK PLT+LANRLFDN EKL++A K +++ LT+SCY DT   LQEVMNRMA
Sbjct: 157 ASTNDKQPLTDLANRLFDNVEKLEDATKRRNLSLTQSCYQDTTAILQEVMNRMA 208

[Close]

BLAST of Spo27360.1 vs. UniProtKB/TrEMBL
Match: W9QQM8_9ROSA (Oxygen-evolving enhancer protein 3-1 OS=Morus notabilis GN=L484_021171 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.600e-55
Identity = 120/217 (55.30%), Postives = 154/217 (70.97%), Query Frame = 1


		  
Query: 5   GNLYVPNILRTPTKSCLTKCHAKKFEEFHQNEQQSSSLAFKNNTSRRSVISIASIALLTQ 64
           G L +P++ RT  ++ +     KK ++  Q+E    +      T R+  + +ASIAL+  
Sbjct: 16  GALRLPSLRRTQKRANIVGFQGKKKDDHSQSEHNVQT------TRRKLALGLASIALVGN 75

Query: 65  IGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLKKGIYMANIGTKGSALRL 124
              N  SLAE+ N  W+DGPLP +   +N I NE+TGTR+FLKKGIYMA+IGTK    RL
Sbjct: 76  TTCNGVSLAED-NGFWIDGPLP-VPTVDNNIANEKTGTRSFLKKGIYMADIGTKNRKYRL 135

Query: 125 RKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISAAPVADKPPLTNLANRLF 184
           RK AFDLLA+EDLIG+DTLNYV++YLR K TFMYYDFDKVI+AA V DK PLT+LANRLF
Sbjct: 136 RKCAFDLLALEDLIGKDTLNYVQKYLRLKSTFMYYDFDKVITAATVDDKQPLTHLANRLF 195

Query: 185 DNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 222
           D+FEKL+ A K +++P T + Y DT V LQEVM+RMA
Sbjct: 196 DSFEKLEGATKQRNLPETETFYKDTKVILQEVMDRMA 224

[Close]

BLAST of Spo27360.1 vs. UniProtKB/TrEMBL
Match: A0A059BMF5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_F00997 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 5.100e-54
Identity = 108/174 (62.07%), Postives = 138/174 (79.31%), Query Frame = 1


		  
Query: 48  TSRRSVISIASIALLTQIGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLK 107
           TSRR+ + + S+AL+  +G+  A    E+N  WL GP+P + P  NKI NE+TGTR+F++
Sbjct: 105 TSRRTALGLTSVALVGSLGSGLA--LAEDNGYWLTGPIP-VPPIYNKIANEKTGTRSFVR 164

Query: 108 KGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISA 167
            GIY+A+I  KGS  RLRKYAFDLLA+ DLIG+D LNYVR+YLR KGT MYYDFDKVISA
Sbjct: 165 NGIYIADIKVKGSMFRLRKYAFDLLALGDLIGKDVLNYVRKYLRLKGTVMYYDFDKVISA 224

Query: 168 APVADKPPLTNLANRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 222
           A  +DK PLT+LANRLFD+FEKL++A K +D+P T+SCY DT++ LQEVM+RMA
Sbjct: 225 ASASDKQPLTDLANRLFDDFEKLEDAAKKEDLPETQSCYQDTSIILQEVMDRMA 275

[Close]

BLAST of Spo27360.1 vs. ExPASy Swiss-Prot
Match: PNSL3_ARATH (Photosynthetic NDH subunit of lumenal location 3, chloroplastic OS=Arabidopsis thaliana GN=PNSL3 PE=1 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 1.600e-53
Identity = 108/174 (62.07%), Postives = 132/174 (75.86%), Query Frame = 1


		  
Query: 49  SRRSVISIA-SIALLTQIGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLK 108
           +RR  +  A SI L   +G NN SLA++ N  W+DGPLP + P  N I NE+TGTRTF+K
Sbjct: 49  TRRMTLGFAVSIGLTGILGENNVSLAQD-NGFWIDGPLP-IPPIYNNIVNEKTGTRTFIK 108

Query: 109 KGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISA 168
           KG+Y+A+IGTKG   R++K AFDLLAMEDLIG DTLNYV++YLR K TF++YDFD +ISA
Sbjct: 109 KGVYVADIGTKGRMYRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISA 168

Query: 169 APVADKPPLTNLANRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 222
           A   DK PLT+LANRLFDNFEKL++A K K++  T SCY DT   LQEVM RMA
Sbjct: 169 AASEDKQPLTDLANRLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRMA 220

[Close]

BLAST of Spo27360.1 vs. ExPASy Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 66.6 bits (161), Expect = 3.800e-10
Identity = 50/174 (28.74%), Postives = 81/174 (46.55%), Query Frame = 1


		  
Query: 48  TSRRSVISIASIALLTQIGTNNASLAEEENQLWLDGPLP-GLRPAENKIGNEETGTRTFL 107
           TSRRSVI + +  L        A LA+  +      P P G  PA     ++       L
Sbjct: 51  TSRRSVIGLVAAGLAGGSFVQ-AVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALAL 110

Query: 108 KKGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVIS 167
           K   Y+  +    +A R ++ A D++ ++ LI +    YV+  LR K +++ YD + +IS
Sbjct: 111 KDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIIS 170

Query: 168 AAPVADKPPLTNLANRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRM 221
           + P  +K  L +L  +LFD  + L  A K K        Y +T   L EV+ ++
Sbjct: 171 SKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

[Close]

BLAST of Spo27360.1 vs. ExPASy Swiss-Prot
Match: PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.500e-9
Identity = 42/174 (24.14%), Postives = 82/174 (47.13%), Query Frame = 1


		  
Query: 50  RRSVISIASIALLTQIGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTF---L 109
           RR+VI + +  ++     + A+ AE    + +  P P        + +++   R F   L
Sbjct: 46  RRAVIGLVATGIVGG-ALSQAARAETVKTIKIGAPPPPSGGLPGTLNSDQA--RDFDLPL 105

Query: 110 KKGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVIS 169
           K+  Y+  +    +A R++  A D++ ++ LI +    YV+  LR + +++ YD   VI+
Sbjct: 106 KERFYLQPLPPAEAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIA 165

Query: 170 AAPVADKPPLTNLANRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRM 221
           + P  +K  L  L  +LF   + L  A K+K  P     +  T   L +V+ ++
Sbjct: 166 SKPKEEKKSLKELTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKL 216

[Close]

BLAST of Spo27360.1 vs. ExPASy Swiss-Prot
Match: PSBQ_ONOVI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis viciifolia GN=PSBQ PE=2 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 5.500e-9
Identity = 52/191 (27.23%), Postives = 93/191 (48.69%), Query Frame = 1


		  
Query: 34  QNEQQS--SSLAFKNNTSRRSVISIASIALLTQIGTNNASLAEEENQLWLDGPLPGLRPA 93
           Q EQQ   SS A    ++RR+++ + +  L +      A LAE +  + + GP P     
Sbjct: 42  QQEQQQGMSSSAADPQSNRRAMLGLVATGLASASFVQ-AVLAEAK-PIKVGGPPPPSGGL 101

Query: 94  ENKIGNEET-GTRTFLKKGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYL 153
              + ++E    +  LK+  Y+  +    +A R R+ A +++A++  I Q   +     L
Sbjct: 102 GGTLNSDEARDLKLPLKERFYIQPLSPTEAAQRQRESAKEIVAVKKFIDQKLGHMFINDL 161

Query: 154 RFKGTFMYYDFDKVISAAPVADKPPLT-NLANRLFDNFEKLQEAVKLKDVPLTRSCYDDT 213
           R + +++ YD + VIS+ P   K  L  + A +LF + + L  A KLK  P     Y D 
Sbjct: 162 RLRASYLRYDLNTVISSKPKEQKQSLKESSAGKLFQDIDNLDYAAKLKSAPQAEKYYADA 221

Query: 214 AVTLQEVMNRM 221
             TL +V++++
Sbjct: 222 VSTLNDVLSKI 230

[Close]

BLAST of Spo27360.1 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 7.200e-9
Identity = 47/176 (26.70%), Postives = 84/176 (47.73%), Query Frame = 1


		  
Query: 48  TSRRSVISIASIALLTQIGTNNASLAEEENQLWLDGP-LP--GLRPAENKIGNEETGTRT 107
           +SRRSVI + +  L    G+   ++  E   + + GP LP  GL   +N   ++      
Sbjct: 58  SSRRSVIGLVAAGLAG--GSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNS--DQARDFSL 117

Query: 108 FLKKGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKV 167
            LK   Y+  +    +A R +  A +++ ++  I +    YV+  LR + +++ YD + V
Sbjct: 118 ALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTV 177

Query: 168 ISAAPVADKPPLTNLANRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRM 221
           ISA P  +K  L +L  +LF   + L  A + K  P     Y +T  +L  V+ ++
Sbjct: 178 ISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKL 229

[Close]

BLAST of Spo27360.1 vs. TAIR (Arabidopsis)
Match: AT3G01440.1 (PsbQ-like 1)

HSP 1 Score: 210.7 bits (535), Expect = 9.200e-55
Identity = 108/174 (62.07%), Postives = 132/174 (75.86%), Query Frame = 1


		  
Query: 49  SRRSVISIA-SIALLTQIGTNNASLAEEENQLWLDGPLPGLRPAENKIGNEETGTRTFLK 108
           +RR  +  A SI L   +G NN SLA++ N  W+DGPLP + P  N I NE+TGTRTF+K
Sbjct: 49  TRRMTLGFAVSIGLTGILGENNVSLAQD-NGFWIDGPLP-IPPIYNNIVNEKTGTRTFIK 108

Query: 109 KGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVISA 168
           KG+Y+A+IGTKG   R++K AFDLLAMEDLIG DTLNYV++YLR K TF++YDFD +ISA
Sbjct: 109 KGVYVADIGTKGRMYRVKKNAFDLLAMEDLIGPDTLNYVKKYLRLKSTFLFYDFDNLISA 168

Query: 169 APVADKPPLTNLANRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRMA 222
           A   DK PLT+LANRLFDNFEKL++A K K++  T SCY DT   LQEVM RMA
Sbjct: 169 AASEDKQPLTDLANRLFDNFEKLEDAAKTKNLAETESCYKDTKFLLQEVMTRMA 220

[Close]

BLAST of Spo27360.1 vs. TAIR (Arabidopsis)
Match: AT4G21280.2 (photosystem II subunit QA)

HSP 1 Score: 66.6 bits (161), Expect = 2.200e-11
Identity = 50/174 (28.74%), Postives = 81/174 (46.55%), Query Frame = 1


		  
Query: 48  TSRRSVISIASIALLTQIGTNNASLAEEENQLWLDGPLP-GLRPAENKIGNEETGTRTFL 107
           TSRRSVI + +  L        A LA+  +      P P G  PA     ++       L
Sbjct: 51  TSRRSVIGLVAAGLAGGSFVQ-AVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALAL 110

Query: 108 KKGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKVIS 167
           K   Y+  +    +A R ++ A D++ ++ LI +    YV+  LR K +++ YD + +IS
Sbjct: 111 KDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIIS 170

Query: 168 AAPVADKPPLTNLANRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRM 221
           + P  +K  L +L  +LFD  + L  A K K        Y +T   L EV+ ++
Sbjct: 171 SKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKL 223

[Close]

BLAST of Spo27360.1 vs. TAIR (Arabidopsis)
Match: AT4G05180.1 (photosystem II subunit Q-2)

HSP 1 Score: 62.4 bits (150), Expect = 4.100e-10
Identity = 47/176 (26.70%), Postives = 84/176 (47.73%), Query Frame = 1


		  
Query: 48  TSRRSVISIASIALLTQIGTNNASLAEEENQLWLDGP-LP--GLRPAENKIGNEETGTRT 107
           +SRRSVI + +  L    G+   ++  E   + + GP LP  GL   +N   ++      
Sbjct: 58  SSRRSVIGLVAAGLAG--GSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNS--DQARDFSL 117

Query: 108 FLKKGIYMANIGTKGSALRLRKYAFDLLAMEDLIGQDTLNYVRRYLRFKGTFMYYDFDKV 167
            LK   Y+  +    +A R +  A +++ ++  I +    YV+  LR + +++ YD + V
Sbjct: 118 ALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTV 177

Query: 168 ISAAPVADKPPLTNLANRLFDNFEKLQEAVKLKDVPLTRSCYDDTAVTLQEVMNRM 221
           ISA P  +K  L +L  +LF   + L  A + K  P     Y +T  +L  V+ ++
Sbjct: 178 ISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKL 229

The following BLAST results are available for this feature:

BLAST of Spo27360.1 vs. NCBI nr
BLAST of Spo27360.1 vs. UniProtKB/TrEMBL
BLAST of Spo27360.1 vs. ExPASy Swiss-Prot
BLAST of Spo27360.1 vs. TAIR (Arabidopsis)

BLAST of Spo27360.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902205736\|gb\|KNA15248.1\|	9.1e-121	100.	hypothetical protein SOVF_0999...	[more]
gi\|731364972\|ref\|XP_010694269.1\|	1.4e-84	74.0	PREDICTED: psbQ-like protein 2...	[more]
gi\|694353220\|ref\|XP_009358084.1\|	3.0e-55	57.5	PREDICTED: psbQ-like protein 2...	[more]
gi\|703083809\|ref\|XP_010092309.1\|	5.1e-55	55.3	Oxygen-evolving enhancer prote...	[more]
gi\|1009110877\|ref\|XP_015898087.1\|	3.3e-54	58.6	PREDICTED: photosynthetic NDH ...	[more]

BLAST of Spo27360.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R6W0_SPIOL	6.4e-121	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8E5R6_BETVU	9.6e-85	74.0	Uncharacterized protein OS=Bet...	[more]
A0A0F7CYJ0_9ROSI	2.8e-60	69.5	Photosynthetic NDH subcomplex ...	[more]
W9QQM8_9ROSA	3.6e-55	55.3	Oxygen-evolving enhancer prote...	[more]
A0A059BMF5_EUCGR	5.1e-54	62.0	Uncharacterized protein OS=Euc...	[more]

BLAST of Spo27360.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
PNSL3_ARATH	1.6e-53	62.0	Photosynthetic NDH subunit of ...	[more]
PSBQ1_ARATH	3.8e-10	28.7	Oxygen-evolving enhancer prote...	[more]
PSBQ1_MAIZE	5.5e-9	24.1	Oxygen-evolving enhancer prote...	[more]
PSBQ_ONOVI	5.5e-9	27.2	Oxygen-evolving enhancer prote...	[more]
PSBQ2_ARATH	7.2e-9	26.7	Oxygen-evolving enhancer prote...	[more]

BLAST of Spo27360.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3


Match Name	E-value	Identity	Description
AT3G01440.1	9.2e-55	62.0	PsbQ-like 1	[more]
AT4G21280.2	2.2e-11	28.7	photosystem II subunit QA	[more]
AT4G05180.1	4.1e-10	26.7	photosystem II subunit Q-2	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008797	Oxygen-evolving enhancer protein 3	PFAM	PF05757	PsbQ	coord: 40..221 score: 1.3
IPR023222	PsbQ-like domain	GENE3D	1.20.120.290		coord: 84..221 score: 4.4
IPR023222	PsbQ-like domain	unknown	SSF101112	Oxygen-evolving enhancer protein 3,	coord: 111..221 score: 5.75
None	No IPR available	PANTHER	PTHR33399	FAMILY NOT NAMED	coord: 33..221 score: 2.9
None	No IPR available	PANTHER	PTHR33399:SF2	PSBQ-LIKE PROTEIN 2, CHLOROPLASTIC	coord: 33..221 score: 2.9

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015979	photosynthesis
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0009767	photosynthetic electron transport chain
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0019252	starch biosynthetic process
cellular_component	GO:0019898	extrinsic component of membrane
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0009654	photosystem II oxygen evolving complex
cellular_component	GO:0030095	chloroplast photosystem II
cellular_component	GO:0009543	chloroplast thylakoid lumen
cellular_component	GO:0009344	nitrite reductase complex [NAD(P)H]
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity