Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCAAAACCTACCAATAATCACAAAAAAGATACGTAACATGGTGAAACTAGCTTTCTTCATGCTAAGAAAAGGAATCTCCAAGAAGAAATTACTTTTAGACCTCAACTTGATGATGAAGCGAGGAAAGACGGCGTTCACCGGAAAAGTCTCCACCACTCGCGGCGGTTTTGTTGGTGGTGGTGACGCCTTTCAAGAGTACGAGTTCAGCTGTAGTAACACCCCTTTATACCACCATTACTTTACCAACAACAAGAAGAAAAACCACCACCAAAGCTACTACTATTACGTGCCGTCGCCGAAAATTATTAATAATGACGCCGTTAATCATGATTTAGAGGCTATTAACAAGGTGTTAGAGACTGTTTTATCAAGTAAACTGAGGATAACGGATTCTCCATTTCCGTTAAAAGACGAGGAAGAATTTGTTGATCATTGTGTGGATGAAGCTGCTGAAGAGTTTATTAAGAGGTTTTACTCGCAACTTAAGGAGCAAAACTGTTAG ATGGAGCAAAACCTACCAATAATCACAAAAAAGATACGTAACATGGTGAAACTAGCTTTCTTCATGCTAAGAAAAGGAATCTCCAAGAAGAAATTACTTTTAGACCTCAACTTGATGATGAAGCGAGGAAAGACGGCGTTCACCGGAAAAGTCTCCACCACTCGCGGCGGTTTTGTTGGTGGTGGTGACGCCTTTCAAGAGTACGAGTTCAGCTGTAGTAACACCCCTTTATACCACCATTACTTTACCAACAACAAGAAGAAAAACCACCACCAAAGCTACTACTATTACGTGCCGTCGCCGAAAATTATTAATAATGACGCCGTTAATCATGATTTAGAGGCTATTAACAAGGTGTTAGAGACTGTTTTATCAAGTAAACTGAGGATAACGGATTCTCCATTTCCGTTAAAAGACGAGGAAGAATTTGTTGATCATTGTGTGGATGAAGCTGCTGAAGAGTTTATTAAGAGGTTTTACTCGCAACTTAAGGAGCAAAACTGTTAG ATGGAGCAAAACCTACCAATAATCACAAAAAAGATACGTAACATGGTGAAACTAGCTTTCTTCATGCTAAGAAAAGGAATCTCCAAGAAGAAATTACTTTTAGACCTCAACTTGATGATGAAGCGAGGAAAGACGGCGTTCACCGGAAAAGTCTCCACCACTCGCGGCGGTTTTGTTGGTGGTGGTGACGCCTTTCAAGAGTACGAGTTCAGCTGTAGTAACACCCCTTTATACCACCATTACTTTACCAACAACAAGAAGAAAAACCACCACCAAAGCTACTACTATTACGTGCCGTCGCCGAAAATTATTAATAATGACGCCGTTAATCATGATTTAGAGGCTATTAACAAGGTGTTAGAGACTGTTTTATCAAGTAAACTGAGGATAACGGATTCTCCATTTCCGTTAAAAGACGAGGAAGAATTTGTTGATCATTGTGTGGATGAAGCTGCTGAAGAGTTTATTAAGAGGTTTTACTCGCAACTTAAGGAGCAAAACTGTTAG MEQNLPIITKKIRNMVKLAFFMLRKGISKKKLLLDLNLMMKRGKTAFTGKVSTTRGGFVGGGDAFQEYEFSCSNTPLYHHYFTNNKKKNHHQSYYYYVPSPKIINNDAVNHDLEAINKVLETVLSSKLRITDSPFPLKDEEEFVDHCVDEAAEEFIKRFYSQLKEQNC Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Homology
BLAST of Spo27372.1 vs. NCBI nr
Match: gi|902234309|gb|KNA23405.1| (hypothetical protein SOVF_025160 [Spinacia oleracea]) HSP 1 Score: 297.0 bits (759), Expect = 2.100e-77 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1
BLAST of Spo27372.1 vs. NCBI nr
Match: gi|902081540|gb|KNA03127.1| (hypothetical protein SOVF_212130, partial [Spinacia oleracea]) HSP 1 Score: 246.9 bits (629), Expect = 2.500e-62 Identity = 126/153 (82.35%), Postives = 139/153 (90.85%), Query Frame = 1
BLAST of Spo27372.1 vs. NCBI nr
Match: gi|731359694|ref|XP_010691419.1| (PREDICTED: uncharacterized protein LOC104904750 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 152.5 bits (384), Expect = 6.400e-34 Identity = 100/183 (54.64%), Postives = 124/183 (67.76%), Query Frame = 1
BLAST of Spo27372.1 vs. NCBI nr
Match: gi|731360409|ref|XP_010691801.1| (PREDICTED: uncharacterized protein LOC104905053 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 132.1 bits (331), Expect = 9.000e-28 Identity = 86/169 (50.89%), Postives = 109/169 (64.50%), Query Frame = 1
BLAST of Spo27372.1 vs. NCBI nr
Match: gi|870848613|gb|KMT00902.1| (hypothetical protein BVRB_9g221740 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 129.8 bits (325), Expect = 4.500e-27 Identity = 88/169 (52.07%), Postives = 111/169 (65.68%), Query Frame = 1
BLAST of Spo27372.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RV47_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_025160 PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 1.500e-77 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1
BLAST of Spo27372.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q7D6_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_212130 PE=4 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.700e-62 Identity = 126/153 (82.35%), Postives = 139/153 (90.85%), Query Frame = 1
BLAST of Spo27372.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BLB4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g221750 PE=4 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 6.300e-28 Identity = 86/169 (50.89%), Postives = 109/169 (64.50%), Query Frame = 1
BLAST of Spo27372.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BIT6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g221740 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 3.100e-27 Identity = 88/169 (52.07%), Postives = 111/169 (65.68%), Query Frame = 1
BLAST of Spo27372.1 vs. UniProtKB/TrEMBL
Match: A5AUD3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030073 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 2.200e-25 Identity = 87/194 (44.85%), Postives = 115/194 (59.28%), Query Frame = 1
BLAST of Spo27372.1 vs. TAIR (Arabidopsis)
Match: AT1G52140.1 (unknown protein) HSP 1 Score: 93.2 bits (230), Expect = 1.600e-19 Identity = 71/202 (35.15%), Postives = 102/202 (50.50%), Query Frame = 1
BLAST of Spo27372.1 vs. TAIR (Arabidopsis)
Match: AT3G16330.1 (unknown protein) HSP 1 Score: 84.3 bits (207), Expect = 7.600e-17 Identity = 71/199 (35.68%), Postives = 98/199 (49.25%), Query Frame = 1
BLAST of Spo27372.1 vs. TAIR (Arabidopsis)
Match: AT4G29110.1 (unknown protein) HSP 1 Score: 73.9 bits (180), Expect = 1.000e-13 Identity = 63/188 (33.51%), Postives = 93/188 (49.47%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo27372.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo27372.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo27372.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo27372.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 3
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
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