Spo28186.1 (mRNA) | SpinachBase

Overview


Name	Spo28186.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Family of unknown function (DUF716)
Location	chr1 : 43635148 .. 43636086 (-)
Sequence length	939

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGACTCTTTTCAATGGCCTTCGCCGGCGGCAGTTTAATCCTTATCGGAGCTTGGGAATCTCTCTCCTCCTCTTCCTCCCCACCACCACCACCACCACCCAACAACCACCGCCGTTTCTCCACAATCACCCTAATCTCCGCCGCATCACTCTCTTTACTCTTCATCATCGACTCTCTACTGTCCTTCTTCAACGCAACCTCCTCAAACGACAAAGTTGGGTCCGCCGTTCAACTCCAGGTACTCGCAATTTCCTCCCTTTTCTTCATGTTTTCTCTTCTGGGTTCCCTCAATTTCCCTTACCCTTTACTCAATTTGATCCTTCTCTTCGCTTTTCTTGAAGAATTTCTTCTTTTTCACCTCCATTTGAAAGATTCTGATGGGATTGAGAATCGTTATTATGATTTAATGCTTGTTCCGATTGCGATTTGTGCGTTTTCCACTATGATTGAATTGATTTCCCCAGATTCTGGAACCCCTAAATTAGGTCGTGGGTTAGGGTTAATCTTGCAGGGGACTTGGTTTGTGCAAATGGGGTTTTCGTTTTTCACGGACTTGATTGCGAATAACTGCAATTTGCATATTAAGAGTAGGGGGAATTATACGATCAATTGCAAGGGTCATATGGATACTCACCGTGGAGGGGCGATTGCTGTGCTTATGTTTAATTGCCACCTTGCTTTCCTTGTTGCTCTGTTTTGTGGGGTGTTTTCGGTTTTTGGGAGAAGGTTTGTCGCCCAGGGTGATCACTTGAAGTACCGGCCCCTCGGTGCTGAGTTGCGAAGAATGGAGAACCAAGGGAGGTTTACTTTGGATTCTGATTCCGATGATGGTGTCATTGATGTGGTTAAACAAGGAGATTGTAGTTCCGGGTTAAGAGGAGAGAATGGTGCTGTAGAGTTGGGTGTCAATGGTCATGGTTCTCATTCAGAGAATTAG

mRNA sequence

ATGGGACTCTTTTCAATGGCCTTCGCCGGCGGCAGTTTAATCCTTATCGGAGCTTGGGAATCTCTCTCCTCCTCTTCCTCCCCACCACCACCACCACCACCCAACAACCACCGCCGTTTCTCCACAATCACCCTAATCTCCGCCGCATCACTCTCTTTACTCTTCATCATCGACTCTCTACTGTCCTTCTTCAACGCAACCTCCTCAAACGACAAAGTTGGGTCCGCCGTTCAACTCCAGGTACTCGCAATTTCCTCCCTTTTCTTCATGTTTTCTCTTCTGGGTTCCCTCAATTTCCCTTACCCTTTACTCAATTTGATCCTTCTCTTCGCTTTTCTTGAAGAATTTCTTCTTTTTCACCTCCATTTGAAAGATTCTGATGGGATTGAGAATCGTTATTATGATTTAATGCTTGTTCCGATTGCGATTTGTGCGTTTTCCACTATGATTGAATTGATTTCCCCAGATTCTGGAACCCCTAAATTAGGTCGTGGGTTAGGGTTAATCTTGCAGGGGACTTGGTTTGTGCAAATGGGGTTTTCGTTTTTCACGGACTTGATTGCGAATAACTGCAATTTGCATATTAAGAGTAGGGGGAATTATACGATCAATTGCAAGGGTCATATGGATACTCACCGTGGAGGGGCGATTGCTGTGCTTATGTTTAATTGCCACCTTGCTTTCCTTGTTGCTCTGTTTTGTGGGGTGTTTTCGGTTTTTGGGAGAAGGTTTGTCGCCCAGGGTGATCACTTGAAGTACCGGCCCCTCGGTGCTGAGTTGCGAAGAATGGAGAACCAAGGGAGGTTTACTTTGGATTCTGATTCCGATGATGGTGTCATTGATGTGGTTAAACAAGGAGATTGTAGTTCCGGGTTAAGAGGAGAGAATGGTGCTGTAGAGTTGGGTGTCAATGGTCATGGTTCTCATTCAGAGAATTAG

Coding sequence (CDS)

ATGGGACTCTTTTCAATGGCCTTCGCCGGCGGCAGTTTAATCCTTATCGGAGCTTGGGAATCTCTCTCCTCCTCTTCCTCCCCACCACCACCACCACCACCCAACAACCACCGCCGTTTCTCCACAATCACCCTAATCTCCGCCGCATCACTCTCTTTACTCTTCATCATCGACTCTCTACTGTCCTTCTTCAACGCAACCTCCTCAAACGACAAAGTTGGGTCCGCCGTTCAACTCCAGGTACTCGCAATTTCCTCCCTTTTCTTCATGTTTTCTCTTCTGGGTTCCCTCAATTTCCCTTACCCTTTACTCAATTTGATCCTTCTCTTCGCTTTTCTTGAAGAATTTCTTCTTTTTCACCTCCATTTGAAAGATTCTGATGGGATTGAGAATCGTTATTATGATTTAATGCTTGTTCCGATTGCGATTTGTGCGTTTTCCACTATGATTGAATTGATTTCCCCAGATTCTGGAACCCCTAAATTAGGTCGTGGGTTAGGGTTAATCTTGCAGGGGACTTGGTTTGTGCAAATGGGGTTTTCGTTTTTCACGGACTTGATTGCGAATAACTGCAATTTGCATATTAAGAGTAGGGGGAATTATACGATCAATTGCAAGGGTCATATGGATACTCACCGTGGAGGGGCGATTGCTGTGCTTATGTTTAATTGCCACCTTGCTTTCCTTGTTGCTCTGTTTTGTGGGGTGTTTTCGGTTTTTGGGAGAAGGTTTGTCGCCCAGGGTGATCACTTGAAGTACCGGCCCCTCGGTGCTGAGTTGCGAAGAATGGAGAACCAAGGGAGGTTTACTTTGGATTCTGATTCCGATGATGGTGTCATTGATGTGGTTAAACAAGGAGATTGTAGTTCCGGGTTAAGAGGAGAGAATGGTGCTGTAGAGTTGGGTGTCAATGGTCATGGTTCTCATTCAGAGAATTAG

Protein sequence

MGLFSMAFAGGSLILIGAWESLSSSSSPPPPPPPNNHRRFSTITLISAASLSLLFIIDSLLSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSLNFPYPLLNLILLFAFLEEFLLFHLHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSGTPKLGRGLGLILQGTWFVQMGFSFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIAVLMFNCHLAFLVALFCGVFSVFGRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDGVIDVVKQGDCSSGLRGENGAVELGVNGHGSHSEN

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo28186	Spo28186	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo28186.1	Spo28186.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo28186.1.CDS.1	Spo28186.1.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo28186.1.exon.1	Spo28186.1.exon.1	exon

Homology

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BLAST of Spo28186.1 vs. NCBI nr
Match: gi|902212426|gb|KNA16964.1| (hypothetical protein SOVF_084410 [Spinacia oleracea])

HSP 1 Score: 600.1 bits (1546), Expect = 2.200e-168
Identity = 309/312 (99.04%), Postives = 309/312 (99.04%), Query Frame = 1


		  
Query: 1   MGLFSMAFAGGSLILIGAWESLSSSSSPPPPPPPNNHRRFSTITLISAASLSLLFIIDSL 60
           MGLFSM FAGGSLILIGAWESLSSSSSPPPP  PNNHRRFSTITLISAASLSLLFIIDSL
Sbjct: 1   MGLFSMTFAGGSLILIGAWESLSSSSSPPPP--PNNHRRFSTITLISAASLSLLFIIDSL 60

Query: 61  LSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSLNFPYPLLNLILLFAFLEEFLLFH 120
           LSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSLNFPYPLLNLILLFAFLEEFLLFH
Sbjct: 61  LSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSLNFPYPLLNLILLFAFLEEFLLFH 120

Query: 121 LHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSGTPKLGRGLGLILQGTWFVQMGF 180
           LHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSGTPKLGRGLGLILQGTWFVQMGF
Sbjct: 121 LHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSGTPKLGRGLGLILQGTWFVQMGF 180

Query: 181 SFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIAVLMFNCHLAFLVALFCGVFSVF 240
           SFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIAVLMFNCHLAFLVALFCGVFSVF
Sbjct: 181 SFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIAVLMFNCHLAFLVALFCGVFSVF 240

Query: 241 GRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDGVIDVVKQGDCSSGLRGENGAVE 300
           GRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDGVIDVVKQGDCSSGLRGENGAVE
Sbjct: 241 GRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDGVIDVVKQGDCSSGLRGENGAVE 300

Query: 301 LGVNGHGSHSEN 313
           LGVNGHGSHSEN
Sbjct: 301 LGVNGHGSHSEN 310

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BLAST of Spo28186.1 vs. NCBI nr
Match: gi|731368214|ref|XP_010696019.1| (PREDICTED: transmembrane protein 45B [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 470.7 bits (1210), Expect = 2.000e-129
Identity = 250/319 (78.37%), Postives = 271/319 (84.95%), Query Frame = 1


		  
Query: 1   MGLFSMAFAGGSLILIGAWESLSSSSSPPPPPPPNNHRRFSTITLISAASLSLLFIIDSL 60
           MGLFSMAFAGGS ILIGAWESLSSSSS   P      R FSTITLIS   LSLLFIIDS 
Sbjct: 1   MGLFSMAFAGGSFILIGAWESLSSSSSSNKP------RNFSTITLISTFFLSLLFIIDSF 60

Query: 61  LSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSLNF-------PYPLLNLILLFAFL 120
           LSFFNA SSNDK+GS++QLQVLAISSLF MFSLLG LNF       PYPLLNLILLFAF 
Sbjct: 61  LSFFNAISSNDKLGSSLQLQVLAISSLFLMFSLLGLLNFFSKSYSFPYPLLNLILLFAFF 120

Query: 121 EEFLLFHLHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSGTPKLGRGLGLILQGT 180
           EEFLLFHLHLKDS GIENRYYDLMLVPI+IC  ST+IELISPDSG PKLGRGLGLIL+GT
Sbjct: 121 EEFLLFHLHLKDSTGIENRYYDLMLVPISICVISTLIELISPDSGIPKLGRGLGLILKGT 180

Query: 181 WFVQMGFSFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIAVLMFNCHLAFLVALF 240
           WFVQMGFSFFTD IA+NC+L  KSRGNYTI CKGHMD+HRGGAIAVL+FNCHLAFLVAL 
Sbjct: 181 WFVQMGFSFFTDWIAHNCDLGYKSRGNYTIKCKGHMDSHRGGAIAVLLFNCHLAFLVALI 240

Query: 241 CGVFSVFGRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDGVIDVVKQGDCSSGLR 300
           CGVFSVFGR FV +G++  YR LGAE++RMENQGRFTLDSDSDDG I  +KQ +  +GLR
Sbjct: 241 CGVFSVFGRNFVGEGNYSNYRSLGAEMQRMENQGRFTLDSDSDDGGIAEIKQEEGDAGLR 300

Query: 301 GENGAVELGVNGHGSHSEN 313
            ENGA+E+G+NGHGSHS N
Sbjct: 301 PENGALEVGINGHGSHSVN 313

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BLAST of Spo28186.1 vs. NCBI nr
Match: gi|595931099|ref|XP_007215299.1| (hypothetical protein PRUPE_ppa005073mg [Prunus persica])

HSP 1 Score: 313.9 bits (803), Expect = 3.100e-82
Identity = 171/332 (51.51%), Postives = 236/332 (71.08%), Query Frame = 1


		  
Query: 1   MGLFSMAFAGGSLILIGAWESLSSS---------SSPPPPPPPNNHR-------RFSTIT 60
           MG  + A AGG LIL+GA+E++S+S          S PP    +N R       R S+I 
Sbjct: 1   MGFLTFAAAGGGLILMGAYEAISTSIQIPDQDSTPSSPPSSQSSNSRTQTSIQPRTSSIY 60

Query: 61  LISAASLSLLFIIDSLLSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSL-NF---- 120
            ++A+ +SLLF+++SL+SFF+A  +ND+VGSA+QLQV+AI+SLF ++++ G L NF    
Sbjct: 61  YLAASVISLLFVLNSLVSFFDANDANDRVGSALQLQVIAIASLFLLYAITGLLVNFTNST 120

Query: 121 -PYPLLNLILLFAFLEEFLLFHLHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSG 180
            P  LL+L+ LFAF+EEFLLF+L  KD+ GIENRY+D++LVPIA+C FSTM+E  +P S 
Sbjct: 121 MPCSLLSLVGLFAFIEEFLLFYLRKKDNSGIENRYFDMLLVPIAVCIFSTMLEFNNPKSN 180

Query: 181 TPKLGRGLGLILQGTWFVQMGFSFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIA 240
            PKL RG+GL+LQGTWF+QMG S +T+LIA+ C+LH KSRGNYT+ CKGH + HR  AI 
Sbjct: 181 YPKLARGVGLLLQGTWFLQMGISLYTNLIAHGCSLHEKSRGNYTVKCKGHPEYHRARAIV 240

Query: 241 VLMFNCHLAFLVALFCGVFSVFGRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDG 300
            L FNCHLA LV L  GV+S+ G++   +GD   Y+PLGAE  + +NQ +FTLDS+ DD 
Sbjct: 241 TLQFNCHLALLVILVVGVYSIIGKKTGGRGDVSSYKPLGAERHQFDNQSQFTLDSEDDDV 300

Query: 301 VIDVVKQGDCSSGLRGENGAVELGVNGHGSHS 311
             ++ ++G+ +    GE   VELG+NG+GSH+
Sbjct: 301 DEEIKEEGNLAIQKAGE---VELGMNGYGSHN 329

[Close]

BLAST of Spo28186.1 vs. NCBI nr
Match: gi|657975886|ref|XP_008379804.1| (PREDICTED: uncharacterized protein LOC103442775 [Malus domestica])

HSP 1 Score: 312.4 bits (799), Expect = 9.000e-82
Identity = 175/335 (52.24%), Postives = 230/335 (68.66%), Query Frame = 1


		  
Query: 1   MGLFSMAFAGGSLILIGAWESLSSS-----------SSPP--------PPPPPNNHRRFS 60
           MG  + A AGG LIL+GA+E++SSS           SSPP        PPPPP    R S
Sbjct: 1   MGFLTFAAAGGGLILMGAYEAISSSIQNPNADSDSDSSPPSPPQAPIRPPPPPKTQSRSS 60

Query: 61  TITLISAASLSLLFIIDSLLSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSL---- 120
           +I  ++AA +SLLFI++SL+SFF+A  S D VGSA+QLQVLA++SLF ++++ G L    
Sbjct: 61  SIYYLAAAVVSLLFILNSLVSFFDALDSADGVGSAMQLQVLAVASLFLLYAITGLLVKFT 120

Query: 121 --NFPYPLLNLILLFAFLEEFLLFHLHLKDSDGIENRYYDLMLVPIAICAFSTMIELISP 180
               P  LL+LI LFAF+EEFL+F+L  KD+ GIENRY+DL+LVPIA+C FSTM+E  +P
Sbjct: 121 NSTLPCSLLSLIGLFAFVEEFLMFYLQRKDTFGIENRYFDLLLVPIAVCIFSTMLEFNNP 180

Query: 181 DSGTPKLGRGLGLILQGTWFVQMGFSFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGG 240
            S  PKL RG+GL+LQG WF+QMG S +T  IA+ C+LH KSRGNYT+ CKGH + HR  
Sbjct: 181 KSNYPKLARGVGLVLQGMWFLQMGISLYTGFIAHGCSLHEKSRGNYTVKCKGHPEYHRAR 240

Query: 241 AIAVLMFNCHLAFLVALFCGVFSVFGRRF-VAQGDHLKYRPLGAELRRMENQGRFTLDSD 300
           AI  L FNCHLAF+V +  GV+S+  R+    + D   Y+PLG E+ + +NQ RFTLDSD
Sbjct: 241 AIVTLQFNCHLAFMVVMVVGVYSIISRKSGGVRVDVSHYKPLGTEIHQFDNQSRFTLDSD 300

Query: 301 SDDGVIDVVKQGDCSSGLRGENGAVELGVNGHGSH 310
            DD   ++ ++G+ +    GE   VELGVNG+GSH
Sbjct: 301 EDD---EIKEEGNLAMQRAGE---VELGVNGYGSH 329

[Close]

BLAST of Spo28186.1 vs. NCBI nr
Match: gi|645249269|ref|XP_008230673.1| (PREDICTED: uncharacterized protein LOC103329924 [Prunus mume])

HSP 1 Score: 311.6 bits (797), Expect = 1.500e-81
Identity = 169/331 (51.06%), Postives = 235/331 (71.00%), Query Frame = 1


		  
Query: 1   MGLFSMAFAGGSLILIGAWESLSSSSSPP-----PPPPPNNHR-----------RFSTIT 60
           MG  + A AGG LIL+GA+E++S+S   P     P  PP++             R S+I 
Sbjct: 1   MGFLTFAAAGGGLILMGAYEAISTSIQIPDQDSTPSSPPSSQSSNTRTQTSIQSRTSSIY 60

Query: 61  LISAASLSLLFIIDSLLSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSL-NF---- 120
            ++A+ +SLLF+++SL+SFF+A  ++D+VGSA+QLQV+AI+SLF ++++ G L NF    
Sbjct: 61  YLAASVISLLFVLNSLVSFFDANDASDRVGSALQLQVIAIASLFLLYAITGLLVNFTNST 120

Query: 121 -PYPLLNLILLFAFLEEFLLFHLHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSG 180
            P  LL+L+ LFAF+EEFLLF+L  KD+ GIENRY+D++LVPIA+C FSTM+E  +P S 
Sbjct: 121 MPCSLLSLVGLFAFIEEFLLFYLRKKDTSGIENRYFDMLLVPIAVCIFSTMLEFNNPKSN 180

Query: 181 TPKLGRGLGLILQGTWFVQMGFSFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIA 240
            PKL RG+GL+LQGTWF+QMG S +T+LIA+ C+LH KSRGNYT+ CKGH + HR  AI 
Sbjct: 181 YPKLARGVGLLLQGTWFLQMGISLYTNLIAHGCSLHEKSRGNYTVKCKGHPEYHRARAIV 240

Query: 241 VLMFNCHLAFLVALFCGVFSVFGRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDG 300
            L FNCHLA LV L  GV+S+ G++   +GD   Y+PLGAE  + +NQ +FTLDS+ DD 
Sbjct: 241 TLQFNCHLALLVILVVGVYSIIGKKTGGRGDVSSYKPLGAERHQFDNQSQFTLDSEDDDV 300

Query: 301 VIDVVKQGDCSSGLRGENGAVELGVNGHGSH 310
             ++ ++G+ +    GE   VELG+NG+GSH
Sbjct: 301 DEEIKEEGNLAIQKAGE---VELGMNGYGSH 328

[Close]

BLAST of Spo28186.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RD93_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_084410 PE=4 SV=1)

HSP 1 Score: 600.1 bits (1546), Expect = 1.500e-168
Identity = 309/312 (99.04%), Postives = 309/312 (99.04%), Query Frame = 1


		  
Query: 1   MGLFSMAFAGGSLILIGAWESLSSSSSPPPPPPPNNHRRFSTITLISAASLSLLFIIDSL 60
           MGLFSM FAGGSLILIGAWESLSSSSSPPPP  PNNHRRFSTITLISAASLSLLFIIDSL
Sbjct: 1   MGLFSMTFAGGSLILIGAWESLSSSSSPPPP--PNNHRRFSTITLISAASLSLLFIIDSL 60

Query: 61  LSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSLNFPYPLLNLILLFAFLEEFLLFH 120
           LSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSLNFPYPLLNLILLFAFLEEFLLFH
Sbjct: 61  LSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSLNFPYPLLNLILLFAFLEEFLLFH 120

Query: 121 LHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSGTPKLGRGLGLILQGTWFVQMGF 180
           LHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSGTPKLGRGLGLILQGTWFVQMGF
Sbjct: 121 LHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSGTPKLGRGLGLILQGTWFVQMGF 180

Query: 181 SFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIAVLMFNCHLAFLVALFCGVFSVF 240
           SFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIAVLMFNCHLAFLVALFCGVFSVF
Sbjct: 181 SFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIAVLMFNCHLAFLVALFCGVFSVF 240

Query: 241 GRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDGVIDVVKQGDCSSGLRGENGAVE 300
           GRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDGVIDVVKQGDCSSGLRGENGAVE
Sbjct: 241 GRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDGVIDVVKQGDCSSGLRGENGAVE 300

Query: 301 LGVNGHGSHSEN 313
           LGVNGHGSHSEN
Sbjct: 301 LGVNGHGSHSEN 310

[Close]

BLAST of Spo28186.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BBA6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g177360 PE=4 SV=1)

HSP 1 Score: 470.7 bits (1210), Expect = 1.400e-129
Identity = 250/319 (78.37%), Postives = 271/319 (84.95%), Query Frame = 1


		  
Query: 1   MGLFSMAFAGGSLILIGAWESLSSSSSPPPPPPPNNHRRFSTITLISAASLSLLFIIDSL 60
           MGLFSMAFAGGS ILIGAWESLSSSSS   P      R FSTITLIS   LSLLFIIDS 
Sbjct: 1   MGLFSMAFAGGSFILIGAWESLSSSSSSNKP------RNFSTITLISTFFLSLLFIIDSF 60

Query: 61  LSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSLNF-------PYPLLNLILLFAFL 120
           LSFFNA SSNDK+GS++QLQVLAISSLF MFSLLG LNF       PYPLLNLILLFAF 
Sbjct: 61  LSFFNAISSNDKLGSSLQLQVLAISSLFLMFSLLGLLNFFSKSYSFPYPLLNLILLFAFF 120

Query: 121 EEFLLFHLHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSGTPKLGRGLGLILQGT 180
           EEFLLFHLHLKDS GIENRYYDLMLVPI+IC  ST+IELISPDSG PKLGRGLGLIL+GT
Sbjct: 121 EEFLLFHLHLKDSTGIENRYYDLMLVPISICVISTLIELISPDSGIPKLGRGLGLILKGT 180

Query: 181 WFVQMGFSFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIAVLMFNCHLAFLVALF 240
           WFVQMGFSFFTD IA+NC+L  KSRGNYTI CKGHMD+HRGGAIAVL+FNCHLAFLVAL 
Sbjct: 181 WFVQMGFSFFTDWIAHNCDLGYKSRGNYTIKCKGHMDSHRGGAIAVLLFNCHLAFLVALI 240

Query: 241 CGVFSVFGRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDGVIDVVKQGDCSSGLR 300
           CGVFSVFGR FV +G++  YR LGAE++RMENQGRFTLDSDSDDG I  +KQ +  +GLR
Sbjct: 241 CGVFSVFGRNFVGEGNYSNYRSLGAEMQRMENQGRFTLDSDSDDGGIAEIKQEEGDAGLR 300

Query: 301 GENGAVELGVNGHGSHSEN 313
            ENGA+E+G+NGHGSHS N
Sbjct: 301 PENGALEVGINGHGSHSVN 313

[Close]

BLAST of Spo28186.1 vs. UniProtKB/TrEMBL
Match: G5DWS5_SILLA (Putative uncharacterized protein (Fragment) OS=Silene latifolia PE=2 SV=1)

HSP 1 Score: 379.4 bits (973), Expect = 4.200e-102
Identity = 200/317 (63.09%), Postives = 244/317 (76.97%), Query Frame = 1


		  
Query: 1   MGLFSMAFAGGSLILIGAWESLSSSSSPPPPPPPNNHRRFSTITLISAASLSLLFIIDSL 60
           M LFSMAFAGG LIL+G+WESL+S+S           +RFSTI+LIS + LSLLFI DSL
Sbjct: 1   MSLFSMAFAGGGLILLGSWESLTSTSKT---------QRFSTISLISTSFLSLLFIFDSL 60

Query: 61  LSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSLN-------FPYPLLNLILLFAFL 120
           LS F++ SS+DK+G  +QLQVLAISSLF +FS+LG  N       FPYPL+NLILLFAF+
Sbjct: 61  LSIFDSFSSHDKMGPTLQLQVLAISSLFLLFSILGIFNNFSKTLIFPYPLINLILLFAFI 120

Query: 121 EEFLLFHLHLKDSDGIENRYYDLMLVPIAICAFSTMIEL----------ISPDSGT--PK 180
           EEFLLFHL  KD DG+ENRYYDLM+VPI +C  ST++EL          I    G    K
Sbjct: 121 EEFLLFHLQFKDVDGVENRYYDLMMVPILVCVISTIVELKDSSFESIESIRAKGGVNFAK 180

Query: 181 LGRGLGLILQGTWFVQMGFSFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIAVLM 240
           LGRGLGLILQGTWFVQMGFSFF+DLIANNC+LH KSRGN+TINC+ HMD HRGGAIAVL+
Sbjct: 181 LGRGLGLILQGTWFVQMGFSFFSDLIANNCHLHRKSRGNFTINCQSHMDLHRGGAIAVLL 240

Query: 241 FNCHLAFLVALFCGVFSVFGRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDGVID 299
           FNCHLA LVA+ CGV+S+ G+RFV +GD+  YRP+G E++R+EN+G+FTLDSDSD+G ++
Sbjct: 241 FNCHLALLVAVVCGVYSIVGKRFVVEGDYRSYRPIGGEMQRVENEGKFTLDSDSDEGGVN 300

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BLAST of Spo28186.1 vs. UniProtKB/TrEMBL
Match: G5DWS6_SILLA (Putative uncharacterized protein (Fragment) OS=Silene latifolia PE=2 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 1.600e-101
Identity = 201/317 (63.41%), Postives = 242/317 (76.34%), Query Frame = 1


		  
Query: 1   MGLFSMAFAGGSLILIGAWESLSSSSSPPPPPPPNNHRRFSTITLISAASLSLLFIIDSL 60
           M LFSMAFAGG LIL+G+WESL+S+S           +RFSTI+LIS + LSLLFI DSL
Sbjct: 1   MSLFSMAFAGGGLILLGSWESLTSTSKT---------QRFSTISLISTSFLSLLFIFDSL 60

Query: 61  LSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSLN-------FPYPLLNLILLFAFL 120
           LS F++ SS+DK+G  +QLQVLAISSLF +FS+LG  N       FPYPL+NLILLFAF+
Sbjct: 61  LSIFDSFSSHDKMGPTLQLQVLAISSLFLLFSILGIFNNFSKTLIFPYPLINLILLFAFI 120

Query: 121 EEFLLFHLHLKDSDGIENRYYDLMLVPIAICAFSTMIEL----------ISPDSGT--PK 180
           EEFLLFHL  KD DG+ENRYYDLM+VPI +C  ST++EL          I    G    K
Sbjct: 121 EEFLLFHLQFKDVDGVENRYYDLMMVPILVCVISTIVELKDSSFESIESIRAKGGVNFAK 180

Query: 181 LGRGLGLILQGTWFVQMGFSFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIAVLM 240
           LGRGLGLILQGTWFVQMGFSFF+DLIANNC+LH KSRGN+TINC+ HMD HRGGAIAVL+
Sbjct: 181 LGRGLGLILQGTWFVQMGFSFFSDLIANNCHLHRKSRGNFTINCQSHMDLHRGGAIAVLL 240

Query: 241 FNCHLAFLVALFCGVFSVFGRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDGVID 299
           FNCHLA LVA+ CGV+SV G+RFV +GD+  YRP+G E+ R+EN+G+FTLDSDSD+G ++
Sbjct: 241 FNCHLALLVAVVCGVYSVVGKRFVVEGDYQSYRPIGGEMERVENEGKFTLDSDSDEGGVN 300

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BLAST of Spo28186.1 vs. UniProtKB/TrEMBL
Match: M5X4Q5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa005073mg PE=3 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 2.200e-82
Identity = 171/332 (51.51%), Postives = 236/332 (71.08%), Query Frame = 1


		  
Query: 1   MGLFSMAFAGGSLILIGAWESLSSS---------SSPPPPPPPNNHR-------RFSTIT 60
           MG  + A AGG LIL+GA+E++S+S          S PP    +N R       R S+I 
Sbjct: 1   MGFLTFAAAGGGLILMGAYEAISTSIQIPDQDSTPSSPPSSQSSNSRTQTSIQPRTSSIY 60

Query: 61  LISAASLSLLFIIDSLLSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSL-NF---- 120
            ++A+ +SLLF+++SL+SFF+A  +ND+VGSA+QLQV+AI+SLF ++++ G L NF    
Sbjct: 61  YLAASVISLLFVLNSLVSFFDANDANDRVGSALQLQVIAIASLFLLYAITGLLVNFTNST 120

Query: 121 -PYPLLNLILLFAFLEEFLLFHLHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSG 180
            P  LL+L+ LFAF+EEFLLF+L  KD+ GIENRY+D++LVPIA+C FSTM+E  +P S 
Sbjct: 121 MPCSLLSLVGLFAFIEEFLLFYLRKKDNSGIENRYFDMLLVPIAVCIFSTMLEFNNPKSN 180

Query: 181 TPKLGRGLGLILQGTWFVQMGFSFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGAIA 240
            PKL RG+GL+LQGTWF+QMG S +T+LIA+ C+LH KSRGNYT+ CKGH + HR  AI 
Sbjct: 181 YPKLARGVGLLLQGTWFLQMGISLYTNLIAHGCSLHEKSRGNYTVKCKGHPEYHRARAIV 240

Query: 241 VLMFNCHLAFLVALFCGVFSVFGRRFVAQGDHLKYRPLGAELRRMENQGRFTLDSDSDDG 300
            L FNCHLA LV L  GV+S+ G++   +GD   Y+PLGAE  + +NQ +FTLDS+ DD 
Sbjct: 241 TLQFNCHLALLVILVVGVYSIIGKKTGGRGDVSSYKPLGAERHQFDNQSQFTLDSEDDDV 300

Query: 301 VIDVVKQGDCSSGLRGENGAVELGVNGHGSHS 311
             ++ ++G+ +    GE   VELG+NG+GSH+
Sbjct: 301 DEEIKEEGNLAIQKAGE---VELGMNGYGSHN 329

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BLAST of Spo28186.1 vs. ExPASy Swiss-Prot
Match: TM45B_XENLA (Transmembrane protein 45B OS=Xenopus laevis GN=tmem45b PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.200e-6
Identity = 32/87 (36.78%), Postives = 47/87 (54.02%), Query Frame = 1


		  
Query: 97  LNFPYPLLNLILLFAFLEEFLLFHLHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPD 156
           LN P  L  L L  A + E LLF+ H+ +   ++   + L+L+ +  CA S MIE+   +
Sbjct: 114 LNLPRGLDRLSLGIAVIVEGLLFYYHVHNRPALDQHIHSLLLIAVFGCAISIMIEVFMRN 173

Query: 157 SGTPKLGRGLGLILQGTWFVQMGFSFF 184
               +L R    ILQGTWF Q+GF  +
Sbjct: 174 DIVLELFRASLSILQGTWFWQIGFVLY 200

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BLAST of Spo28186.1 vs. TAIR (Arabidopsis)
Match: AT3G01360.1 (Family of unknown function (DUF716) )

HSP 1 Score: 268.9 bits (686), Expect = 4.000e-72
Identity = 169/335 (50.45%), Postives = 207/335 (61.79%), Query Frame = 1


		  
Query: 1   MGLFSMAFAGGSLILIGAWESLSSSSSPP-------PPPPPNNHRRFSTITLISAAS--- 60
           MG+ S A AGG   +IGAWESL SS+  P           P    R S    + ++S   
Sbjct: 1   MGILSYAVAGGGFAVIGAWESLDSSNLDPNSSSGTADSSSPMAQIRASPPKSVGSSSIPV 60

Query: 61  --LSLLFIIDSLLSFFNATSSNDKVGSAVQLQVLAISSLFFMFSLLGSL---------NF 120
             LS LFI +S  SFF++  S D+VGS +QLQ++A++ LF  +++L  L           
Sbjct: 61  ALLSSLFIANSFFSFFSSIGSRDRVGSMIQLQIVAVAVLFLYYAILTYLVNSKNAVFVAL 120

Query: 121 PYPLLNLILLFAFLEEFLLFHLHLKDSDGIENRYYDLMLVPIAICAFSTMIELISPDSGT 180
           P  +  L+LLF F+EEFL+F+L  KD  GIENRYYDLMLVPIAIC FST+ EL S DS T
Sbjct: 121 PSSITTLLLLFGFIEEFLMFYLQKKDVSGIENRYYDLMLVPIAICVFSTVFELKS-DSST 180

Query: 181 ---PKLGRGLGLILQGTWFVQMGFSFFTDLIANNCNLHIKSRGNYTINCKGHMDTHRGGA 240
               KLGRG+GLILQGTWF+QMG SFFT LI NNC  H KSRGN+TI CKGH D HR  A
Sbjct: 181 HRFAKLGRGIGLILQGTWFLQMGVSFFTGLITNNCTFHEKSRGNFTIKCKGHGDYHRAKA 240

Query: 241 IAVLMFNCHLAFLVALFCGVFSVFGRR--FVAQGDHLKYRPLGAELRRMENQGRFTLDSD 300
           IA L FNCHLA +V +  G+FSV   +  ++ Q DH KYRPLGAEL   EN   FTLDSD
Sbjct: 241 IATLQFNCHLALMVVVATGLFSVIANKNGYLRQ-DHSKYRPLGAEL---ENLSTFTLDSD 300

Query: 301 SDDGVIDVVKQGDCSSGLRGENGAVELGVNGHGSH 310
            +D V +              N A E+G+NG+ SH
Sbjct: 301 EEDEVRE------------ESNVAKEVGLNGNSSH 318

The following BLAST results are available for this feature:

BLAST of Spo28186.1 vs. NCBI nr
BLAST of Spo28186.1 vs. UniProtKB/TrEMBL
BLAST of Spo28186.1 vs. ExPASy Swiss-Prot
BLAST of Spo28186.1 vs. TAIR (Arabidopsis)

BLAST of Spo28186.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902212426\|gb\|KNA16964.1\|	2.2e-168	99.0	hypothetical protein SOVF_0844...	[more]
gi\|731368214\|ref\|XP_010696019.1\|	2.0e-129	78.3	PREDICTED: transmembrane prote...	[more]
gi\|595931099\|ref\|XP_007215299.1\|	3.1e-82	51.5	hypothetical protein PRUPE_ppa...	[more]
gi\|657975886\|ref\|XP_008379804.1\|	9.0e-82	52.2	PREDICTED: uncharacterized pro...	[more]
gi\|645249269\|ref\|XP_008230673.1\|	1.5e-81	51.0	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo28186.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RD93_SPIOL	1.5e-168	99.0	Uncharacterized protein OS=Spi...	[more]
A0A0J8BBA6_BETVU	1.4e-129	78.3	Uncharacterized protein OS=Bet...	[more]
G5DWS5_SILLA	4.2e-102	63.0	Putative uncharacterized prote...	[more]
G5DWS6_SILLA	1.6e-101	63.4	Putative uncharacterized prote...	[more]
M5X4Q5_PRUPE	2.2e-82	51.5	Uncharacterized protein OS=Pru...	[more]

BLAST of Spo28186.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
TM45B_XENLA	6.2e-6	36.7	Transmembrane protein 45B OS=X...	[more]

BLAST of Spo28186.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G01360.1	4.0e-72	50.4	Family of unknown function (DU...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006904	Protein of unknown function DUF716 (TMEM45)	PANTHER	PTHR16007	EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED	coord: 1..277 score: 1.1E
IPR006904	Protein of unknown function DUF716 (TMEM45)	PFAM	PF04819	DUF716	coord: 103..237 score: 4.7
None	No IPR available	PANTHER	PTHR16007:SF9	SUBFAMILY NOT NAMED	coord: 1..277 score: 1.1E

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008233	peptidase activity