Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTAACCACCTTCTTCTTCTAGCTGCAACCATCCTCTTTCTCTCTCCTCCCACGGTTACAGCCGCGGACTCGGTAGTCCTAGACATGGATGGGAACCCAGTTGAAGCAGGCTCAAGATACTACGTCCAAACTTTGGGAAGCAGGGGAGCAAGCCGTGGTGGCTTAGCCGCTGAACCCCTCAGTGGTATTTGCCCTTTATACGTAGGTCAACACAGGAGCTGGACTAACCAAGGCAGGCCCATAAGTTTCTACCCAGCTGACCCTTCACAGAAAAACATCACACTAAGTTCAGACGTCAACATTGCTTTTGGTCTAAACGGCTTGTGCAGGAACCAAGGAGTGTGGCAGCTGACTTCAAATGGGCAAGGAGTATTCTATGTAACTACTAATGGAGAAATCGGAAACCCAGGTGCTTCCACCTTCACCAACTGGTTCAAGCTCGAAGAAGCGTTGCCTGGAACTAATTCATACAAAATAGTGTATTGTTTCCTTGTACCTGTTCCTGCTGGAAATGGTAAGAGTCATCCTGATTCTGAGTATTGTGAACAGTTGGATGCTACTCTACCTGGGCCTTGGGATTTGTCGTTGTTAAGTTTGGTACCAATTGATAATCCTCTTCCCTTCTTTGGTTTTGTATTCAAGAAGGTCACCAGTACTACTACTGCCACTAGTAGTAGCTACTAG ATGGCTAACCACCTTCTTCTTCTAGCTGCAACCATCCTCTTTCTCTCTCCTCCCACGGTTACAGCCGCGGACTCGGTAGTCCTAGACATGGATGGGAACCCAGTTGAAGCAGGCTCAAGATACTACGTCCAAACTTTGGGAAGCAGGGGAGCAAGCCGTGGTGGCTTAGCCGCTGAACCCCTCAGTGGTATTTGCCCTTTATACGTAGGTCAACACAGGAGCTGGACTAACCAAGGCAGGCCCATAAGTTTCTACCCAGCTGACCCTTCACAGAAAAACATCACACTAAGTTCAGACGTCAACATTGCTTTTGGTCTAAACGGCTTGTGCAGGAACCAAGGAGTGTGGCAGCTGACTTCAAATGGGCAAGGAGTATTCTATGTAACTACTAATGGAGAAATCGGAAACCCAGGTGCTTCCACCTTCACCAACTGGTTCAAGCTCGAAGAAGCGTTGCCTGGAACTAATTCATACAAAATAGTGTATTGTTTCCTTGTACCTGTTCCTGCTGGAAATGGTAAGAGTCATCCTGATTCTGAGTATTGTGAACAGTTGGATGCTACTCTACCTGGGCCTTGGGATTTGTCGTTGTTAAGTTTGGTACCAATTGATAATCCTCTTCCCTTCTTTGGTTTTGTATTCAAGAAGGTCACCAGTACTACTACTGCCACTAGTAGTAGCTACTAG ATGGCTAACCACCTTCTTCTTCTAGCTGCAACCATCCTCTTTCTCTCTCCTCCCACGGTTACAGCCGCGGACTCGGTAGTCCTAGACATGGATGGGAACCCAGTTGAAGCAGGCTCAAGATACTACGTCCAAACTTTGGGAAGCAGGGGAGCAAGCCGTGGTGGCTTAGCCGCTGAACCCCTCAGTGGTATTTGCCCTTTATACGTAGGTCAACACAGGAGCTGGACTAACCAAGGCAGGCCCATAAGTTTCTACCCAGCTGACCCTTCACAGAAAAACATCACACTAAGTTCAGACGTCAACATTGCTTTTGGTCTAAACGGCTTGTGCAGGAACCAAGGAGTGTGGCAGCTGACTTCAAATGGGCAAGGAGTATTCTATGTAACTACTAATGGAGAAATCGGAAACCCAGGTGCTTCCACCTTCACCAACTGGTTCAAGCTCGAAGAAGCGTTGCCTGGAACTAATTCATACAAAATAGTGTATTGTTTCCTTGTACCTGTTCCTGCTGGAAATGGTAAGAGTCATCCTGATTCTGAGTATTGTGAACAGTTGGATGCTACTCTACCTGGGCCTTGGGATTTGTCGTTGTTAAGTTTGGTACCAATTGATAATCCTCTTCCCTTCTTTGGTTTTGTATTCAAGAAGGTCACCAGTACTACTACTGCCACTAGTAGTAGCTACTAG MANHLLLLAATILFLSPPTVTAADSVVLDMDGNPVEAGSRYYVQTLGSRGASRGGLAAEPLSGICPLYVGQHRSWTNQGRPISFYPADPSQKNITLSSDVNIAFGLNGLCRNQGVWQLTSNGQGVFYVTTNGEIGNPGASTFTNWFKLEEALPGTNSYKIVYCFLVPVPAGNGKSHPDSEYCEQLDATLPGPWDLSLLSLVPIDNPLPFFGFVFKKVTSTTTATSSSY Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Homology
BLAST of Spo28328.1 vs. NCBI nr
Match: gi|902078036|gb|KNA03096.1| (hypothetical protein SOVF_212410 [Spinacia oleracea]) HSP 1 Score: 411.8 bits (1057), Expect = 8.000e-112 Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 1
BLAST of Spo28328.1 vs. NCBI nr
Match: gi|902188089|gb|KNA11068.1| (hypothetical protein SOVF_138590 [Spinacia oleracea]) HSP 1 Score: 347.8 bits (891), Expect = 1.400e-92 Identity = 179/238 (75.21%), Postives = 196/238 (82.35%), Query Frame = 1
BLAST of Spo28328.1 vs. NCBI nr
Match: gi|902228866|gb|KNA21297.1| (hypothetical protein SOVF_044560 [Spinacia oleracea]) HSP 1 Score: 347.8 bits (891), Expect = 1.400e-92 Identity = 177/246 (71.95%), Postives = 200/246 (81.30%), Query Frame = 1
BLAST of Spo28328.1 vs. NCBI nr
Match: gi|902188088|gb|KNA11067.1| (hypothetical protein SOVF_138580 [Spinacia oleracea]) HSP 1 Score: 322.4 bits (825), Expect = 6.400e-85 Identity = 166/224 (74.11%), Postives = 182/224 (81.25%), Query Frame = 1
BLAST of Spo28328.1 vs. NCBI nr
Match: gi|902228865|gb|KNA21296.1| (hypothetical protein SOVF_044550 [Spinacia oleracea]) HSP 1 Score: 277.3 bits (708), Expect = 2.400e-71 Identity = 152/237 (64.14%), Postives = 174/237 (73.42%), Query Frame = 1
BLAST of Spo28328.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9A5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_212410 PE=4 SV=1) HSP 1 Score: 411.8 bits (1057), Expect = 5.600e-112 Identity = 197/200 (98.50%), Postives = 198/200 (99.00%), Query Frame = 1
BLAST of Spo28328.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QWG7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_138590 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 9.900e-93 Identity = 179/238 (75.21%), Postives = 196/238 (82.35%), Query Frame = 1
BLAST of Spo28328.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RR37_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_044560 PE=4 SV=1) HSP 1 Score: 347.8 bits (891), Expect = 9.900e-93 Identity = 177/246 (71.95%), Postives = 200/246 (81.30%), Query Frame = 1
BLAST of Spo28328.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QUV4_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_138580 PE=4 SV=1) HSP 1 Score: 322.4 bits (825), Expect = 4.400e-85 Identity = 166/224 (74.11%), Postives = 182/224 (81.25%), Query Frame = 1
BLAST of Spo28328.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RP34_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_044550 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 1.600e-71 Identity = 152/237 (64.14%), Postives = 174/237 (73.42%), Query Frame = 1
BLAST of Spo28328.1 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 1.400e-18 Identity = 66/164 (40.24%), Postives = 89/164 (54.27%), Query Frame = 1
BLAST of Spo28328.1 vs. ExPASy Swiss-Prot
Match: MIRA_SYNDU (Miraculin OS=Synsepalum dulcificum PE=1 SV=3) HSP 1 Score: 92.8 bits (229), Expect = 5.100e-18 Identity = 58/165 (35.15%), Postives = 88/165 (53.33%), Query Frame = 1
BLAST of Spo28328.1 vs. ExPASy Swiss-Prot
Match: IAAS_HORVU (Alpha-amylase/subtilisin inhibitor OS=Hordeum vulgare PE=1 SV=2) HSP 1 Score: 65.9 bits (159), Expect = 6.700e-10 Identity = 51/160 (31.87%), Postives = 78/160 (48.75%), Query Frame = 1
BLAST of Spo28328.1 vs. ExPASy Swiss-Prot
Match: IAAS_WHEAT (Endogenous alpha-amylase/subtilisin inhibitor OS=Triticum aestivum PE=1 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 4.400e-9 Identity = 49/142 (34.51%), Postives = 67/142 (47.18%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo28328.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo28328.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo28328.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 4
BLAST of Spo28328.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 0
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
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