Spo14937.1 (mRNA) | SpinachBase

Overview


Name	Spo14937.1
Type	mRNA
Organism	Spinacia oleracea (Spinach)
Description	Protein TIC 214 (Translocon at the inner envelope membrane of chloroplasts 214) (AtTIC214)
Location	SpoScf_00455 : 205570 .. 206009 (+)
Sequence length	348

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGATTCCTTTACTCAAACAATTCCAAAAGAATCGATTGGAATAAAAGAAATAAGTAAAAAGGTTCCTCATTGGTCATACCAACTAATTGATGAATCCGAACAAGAGGAAATGGGAAATGAAAAACAAGTATCATGGCCTCATCAAATTCGCTCAAGGAGCGGAAAAGAAGTAGTTTTTTTTACGGATAAACAAGAAAATACCGACAATCCTACCCCTAATACTGCTGATATATCTGAGCAAGCGGACGAAGTGGTTTTGACACGTTATCCACAAGAATCTGATTTTCGTCGAGATATAATCAAAGGTTCCATGCGTAGTCAAAGACGTAAAATAGTTATTTGGGAATTGTTTCAAGCAAATATACATTCCCCACTTTTTTTAGACAGAACGAATAAATCCTCTTTTTTTTCTATTACTTTTTCCAGATTAATTAA

mRNA sequence

ATGGCGGATTCCTTTACTCAAACAATTCCAAAAGAATCGATTGGAATAAAAGAAATAAGTAAAAAGGTTCCTCATTGGTCATACCAACTAATTGATGAATCCGAACAAGAGGAAATGGGAAATGAAAAACAAGTATCATGGCCTCATCAAATTCGCTCAAGGAGCGGAAAAGAAGTAGTTTTTTTTACGGATAAACAAGAAAATACCGACAATCCTACCCCTAATACTGCTGATATATCTGAGCAAGCGGACGAAGTGGTTTTGACACGTTATCCACAAGAATCTGATTTTCGTCGAGATATAATCAAAGGTTCCATGCGTAGTCAAAGACGTAAAATAATTAATTAA

Coding sequence (CDS)

ATGGCGGATTCCTTTACTCAAACAATTCCAAAAGAATCGATTGGAATAAAAGAAATAAGTAAAAAGGTTCCTCATTGGTCATACCAACTAATTGATGAATCCGAACAAGAGGAAATGGGAAATGAAAAACAAGTATCATGGCCTCATCAAATTCGCTCAAGGAGCGGAAAAGAAGTAGTTTTTTTTACGGATAAACAAGAAAATACCGACAATCCTACCCCTAATACTGCTGATATATCTGAGCAAGCGGACGAAGTGGTTTTGACACGTTATCCACAAGAATCTGATTTTCGTCGAGATATAATCAAAGGTTCCATGCGTAGTCAAAGACGTAAAATAATTAATTAA

Protein sequence

MADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVVFFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKIIN

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Spo14937	Spo14937	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Spo14937.1	Spo14937.1-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14937.1.exon.1	Spo14937.1.exon.1	exon
Spo14937.1.exon.2	Spo14937.1.exon.2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Spo14937.1.CDS.1	Spo14937.1.CDS.1	CDS
Spo14937.1.CDS.2	Spo14937.1.CDS.2	CDS

Homology

[Close]

BLAST of Spo14937.1 vs. NCBI nr
Match: gi|11497589|ref|NP_054996.1| (ycf1 protein [Spinacia oleracea])

HSP 1 Score: 222.6 bits (566), Expect = 3.500e-55
Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 1


		  
Query: 1   MADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVV 60
           +ADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEM NEKQVSWPHQIRSRSGKEVV
Sbjct: 602 IADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMENEKQVSWPHQIRSRSGKEVV 661

Query: 61  FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
           FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKI+
Sbjct: 662 FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKIV 715

[Close]

BLAST of Spo14937.1 vs. NCBI nr
Match: gi|954580709|ref|XP_014614965.1| (PREDICTED: protein TIC 214-like, partial [Polistes canadensis])

HSP 1 Score: 152.9 bits (385), Expect = 3.400e-34
Identity = 76/114 (66.67%), Postives = 89/114 (78.07%), Query Frame = 1


		  
Query: 1   MADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVV 60
           + DSFT+TIP ES+GIKEISKKVP WSY+LI++ EQ     EK +S  HQIR+R G  VV
Sbjct: 122 LTDSFTETIPTESLGIKEISKKVPRWSYKLINDLEQNIRQYEKGISTEHQIRTRKGNRVV 181

Query: 61  FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
            +TDKQEN DNP PNTAD SEQ  E+ L RY ++SDFRRDIIKGSMR QRRKI+
Sbjct: 182 IYTDKQENIDNPAPNTADTSEQPGEIALIRYSEQSDFRRDIIKGSMRVQRRKIV 235

[Close]

BLAST of Spo14937.1 vs. NCBI nr
Match: gi|628819167|gb|AHY80600.1| (hypothetical chloroplast RF19 (plastid) [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 152.9 bits (385), Expect = 3.400e-34
Identity = 76/114 (66.67%), Postives = 89/114 (78.07%), Query Frame = 1


		  
Query: 1   MADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVV 60
           + DSFT+TIP ES+GIKEISKKVP WSY+LI++ EQ     EK +S  HQIR+R G  VV
Sbjct: 581 LTDSFTETIPTESLGIKEISKKVPRWSYKLINDLEQNIRQYEKGISTEHQIRTRKGNRVV 640

Query: 61  FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
            +TDKQEN DNP PNTAD SEQ  E+ L RY ++SDFRRDIIKGSMR QRRKI+
Sbjct: 641 IYTDKQENIDNPAPNTADTSEQPGEIALIRYSEQSDFRRDIIKGSMRVQRRKIV 694

[Close]

BLAST of Spo14937.1 vs. NCBI nr
Match: gi|836613889|ref|YP_009143697.1| (ycf1 protein (chloroplast) [Salicornia brachiata])

HSP 1 Score: 151.0 bits (380), Expect = 1.300e-33
Identity = 76/114 (66.67%), Postives = 91/114 (79.82%), Query Frame = 1


		  
Query: 1   MADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVV 60
           +ADSFTQTIPK+ IGIKEI+K++P WSY+LIDE EQ +   E+ V   HQIRSR  K VV
Sbjct: 626 IADSFTQTIPKKYIGIKEINKEIPRWSYKLIDEIEQYKKQIEENVLVDHQIRSRKAKRVV 685

Query: 61  FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
            +TDKQENT+NP+PNT D SEQ  E+ L RY Q+SDFRRDII+GSMR QRRKI+
Sbjct: 686 IYTDKQENTENPSPNTVDKSEQPGEIALIRYSQQSDFRRDIIQGSMRVQRRKIV 739

[Close]

BLAST of Spo14937.1 vs. NCBI nr
Match: gi|836613988|ref|YP_009143781.1| (ycf1 protein (chloroplast) [Salicornia europaea])

HSP 1 Score: 151.0 bits (380), Expect = 1.300e-33
Identity = 76/114 (66.67%), Postives = 91/114 (79.82%), Query Frame = 1


		  
Query: 1   MADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVV 60
           +ADSFTQTIPK+ IGIKEI+K++P WSY+LIDE EQ +   E+ V   HQIRSR  K VV
Sbjct: 626 IADSFTQTIPKKYIGIKEINKEIPRWSYKLIDEIEQYKKQIEENVLVDHQIRSRKAKRVV 685

Query: 61  FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
            +TDKQENT+NP+PNT D SEQ  E+ L RY Q+SDFRRDII+GSMR QRRKI+
Sbjct: 686 IYTDKQENTENPSPNTVDKSEQPGEIALIRYSQQSDFRRDIIQGSMRVQRRKIV 739

[Close]

BLAST of Spo14937.1 vs. UniProtKB/TrEMBL
Match: A0A023ZR01_BETVU (Hypothetical chloroplast RF19 OS=Beta vulgaris subsp. vulgaris GN=ycf1 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.400e-34
Identity = 76/114 (66.67%), Postives = 89/114 (78.07%), Query Frame = 1


		  
Query: 1   MADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVV 60
           + DSFT+TIP ES+GIKEISKKVP WSY+LI++ EQ     EK +S  HQIR+R G  VV
Sbjct: 581 LTDSFTETIPTESLGIKEISKKVPRWSYKLINDLEQNIRQYEKGISTEHQIRTRKGNRVV 640

Query: 61  FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
            +TDKQEN DNP PNTAD SEQ  E+ L RY ++SDFRRDIIKGSMR QRRKI+
Sbjct: 641 IYTDKQENIDNPAPNTADTSEQPGEIALIRYSEQSDFRRDIIKGSMRVQRRKIV 694

[Close]

BLAST of Spo14937.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QXG6_SALEU (Ycf1 protein OS=Salicornia europaea GN=ycf1 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 8.900e-34
Identity = 76/114 (66.67%), Postives = 91/114 (79.82%), Query Frame = 1


		  
Query: 1   MADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVV 60
           +ADSFTQTIPK+ IGIKEI+K++P WSY+LIDE EQ +   E+ V   HQIRSR  K VV
Sbjct: 626 IADSFTQTIPKKYIGIKEINKEIPRWSYKLIDEIEQYKKQIEENVLVDHQIRSRKAKRVV 685

Query: 61  FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
            +TDKQENT+NP+PNT D SEQ  E+ L RY Q+SDFRRDII+GSMR QRRKI+
Sbjct: 686 IYTDKQENTENPSPNTVDKSEQPGEIALIRYSQQSDFRRDIIQGSMRVQRRKIV 739

[Close]

BLAST of Spo14937.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QXA7_9CARY (Ycf1 protein OS=Salicornia brachiata GN=ycf1 PE=4 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 8.900e-34
Identity = 76/114 (66.67%), Postives = 91/114 (79.82%), Query Frame = 1


		  
Query: 1   MADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVV 60
           +ADSFTQTIPK+ IGIKEI+K++P WSY+LIDE EQ +   E+ V   HQIRSR  K VV
Sbjct: 626 IADSFTQTIPKKYIGIKEINKEIPRWSYKLIDEIEQYKKQIEENVLVDHQIRSRKAKRVV 685

Query: 61  FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
            +TDKQENT+NP+PNT D SEQ  E+ L RY Q+SDFRRDII+GSMR QRRKI+
Sbjct: 686 IYTDKQENTENPSPNTVDKSEQPGEIALIRYSQQSDFRRDIIQGSMRVQRRKIV 739

[Close]

BLAST of Spo14937.1 vs. UniProtKB/TrEMBL
Match: A0A0G2QXQ1_SALBI (Ycf1 protein OS=Salicornia bigelovii GN=ycf1 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 4.400e-33
Identity = 75/114 (65.79%), Postives = 91/114 (79.82%), Query Frame = 1


		  
Query: 1   MADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVV 60
           +ADSFTQTIPK+ IGIKEI+K++P WSY+LI+E EQ +   E+ V   HQIRSR  K VV
Sbjct: 630 IADSFTQTIPKKYIGIKEINKEIPRWSYKLINEIEQYKKQIEENVLVNHQIRSRKAKRVV 689

Query: 61  FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
            +TDKQENT+NP+PNT D SEQ  E+ L RY Q+SDFRRDII+GSMR QRRKI+
Sbjct: 690 IYTDKQENTENPSPNTVDKSEQPGEIALIRYSQQSDFRRDIIQGSMRVQRRKIV 743

[Close]

BLAST of Spo14937.1 vs. UniProtKB/TrEMBL
Match: A0A0G2R7Z6_MESCR (Hypothetical chloroplast RF19 OS=Mesembryanthemum crystallinum GN=ycf1 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 6.600e-29
Identity = 70/114 (61.40%), Postives = 85/114 (74.56%), Query Frame = 1


		  
Query: 1   MADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVV 60
           +ADSFTQ I K+S+ IKEIS+KVP WSY+LID+ EQ+E  NE+ V+  HQIR+R  K VV
Sbjct: 609 IADSFTQRIQKKSMEIKEISQKVPRWSYKLIDDLEQQERENEEGVATDHQIRTRKAKRVV 668

Query: 61  FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
            FTD Q+N D         S+Q DEVVL RY Q+SDFRRD+IKGSMR QRRKI+
Sbjct: 669 IFTDNQQNIDYANSKGITKSDQTDEVVLIRYSQQSDFRRDVIKGSMRVQRRKIV 722

[Close]

BLAST of Spo14937.1 vs. ExPASy Swiss-Prot
Match: TI214_SPIOL (Protein TIC 214 OS=Spinacia oleracea GN=TIC214 PE=3 SV=2)

HSP 1 Score: 222.6 bits (566), Expect = 2.200e-57
Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 1


		  
Query: 1   MADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVV 60
           +ADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEM NEKQVSWPHQIRSRSGKEVV
Sbjct: 602 IADSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMENEKQVSWPHQIRSRSGKEVV 661

Query: 61  FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
           FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKI+
Sbjct: 662 FFTDKQENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKIV 715

[Close]

BLAST of Spo14937.1 vs. ExPASy Swiss-Prot
Match: TI214_GOSHI (Protein TIC 214 OS=Gossypium hirsutum GN=TIC214 PE=3 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 7.300e-29
Identity = 71/110 (64.55%), Postives = 83/110 (75.45%), Query Frame = 1


		  
Query: 7   QTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVVFFTDKQ 66
           QTI K+SIGIKEISKKVP WSY+LID+ EQ+E  NE+ V+  H+IRSR  K VV FT+ Q
Sbjct: 607 QTIRKKSIGIKEISKKVPRWSYKLIDDLEQQEGENEENVTAEHEIRSRKSKRVVIFTNNQ 666

Query: 67  ENTDNPTPNTADIS--EQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
            N D  T NT D +  +Q DEV L RY Q+SDFRRDIIKGSMR+QRRK I
Sbjct: 667 ANADTYT-NTKDANDPDQTDEVALIRYSQQSDFRRDIIKGSMRAQRRKTI 715

[Close]

BLAST of Spo14937.1 vs. ExPASy Swiss-Prot
Match: TI214_GOSBA (Protein TIC 214 OS=Gossypium barbadense GN=TIC214 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 1.200e-28
Identity = 71/110 (64.55%), Postives = 82/110 (74.55%), Query Frame = 1


		  
Query: 7   QTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVVFFTDKQ 66
           QTI K+SIGIKEISKKVP WSY+LID+ EQ+E  NE+ V+  H+IRSR  K VV FT+ Q
Sbjct: 604 QTIRKKSIGIKEISKKVPRWSYKLIDDLEQQEGENEENVTAEHEIRSRKSKRVVIFTNNQ 663

Query: 67  ENTDNPTPNTADI--SEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
            N D  T NT D    +Q DEV L RY Q+SDFRRDIIKGSMR+QRRK I
Sbjct: 664 ANADTYT-NTKDAIDPDQTDEVALIRYSQQSDFRRDIIKGSMRAQRRKTI 712

[Close]

BLAST of Spo14937.1 vs. ExPASy Swiss-Prot
Match: TI214_EUCGG (Protein TIC 214 OS=Eucalyptus globulus subsp. globulus GN=TIC214 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.100e-27
Identity = 66/109 (60.55%), Postives = 82/109 (75.23%), Query Frame = 1


		  
Query: 6   TQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVVFFTDK 65
           T+ I K+SIGIKEIS KVP WSY+LI++ EQ+E  NE+ V+  H+IRSR  K V+ FTD 
Sbjct: 605 TKRIKKKSIGIKEISTKVPSWSYKLINDLEQQEGENEEMVAEDHEIRSRKTKHVLIFTDN 664

Query: 66  QENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
            ENTD  + NT ++ E ADEV   RY Q+SDFRRDIIKGSMR+QRRK +
Sbjct: 665 DENTDANSKNTNNLDE-ADEVTFIRYSQQSDFRRDIIKGSMRAQRRKTV 712

[Close]

BLAST of Spo14937.1 vs. ExPASy Swiss-Prot
Match: TI214_COFAR (Protein TIC 214 OS=Coffea arabica GN=TIC214 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.400e-26
Identity = 65/108 (60.19%), Postives = 78/108 (72.22%), Query Frame = 1


		  
Query: 7   QTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVVFFTDKQ 66
           Q I KES+GIKEI KKVP WSY+LI + EQ+   +++ V   HQIRSR  K VV FTD +
Sbjct: 628 QKIQKESVGIKEIIKKVPRWSYKLITDLEQQSGEHQENVPVDHQIRSRKAKRVVIFTDNK 687

Query: 67  ENTDNPTPNTADISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
           ENTD    N  D S+Q +EV L RY Q+SDFRR IIKGSMR+QRRKI+
Sbjct: 688 ENTDPNKDN--DTSDQRNEVALIRYSQQSDFRRRIIKGSMRAQRRKIV 733

[Close]

BLAST of Spo14937.1 vs. TAIR (Arabidopsis)
Match: ATCG01130.1 (Ycf1 protein)

HSP 1 Score: 100.1 bits (248), Expect = 9.200e-22
Identity = 61/114 (53.51%), Postives = 75/114 (65.79%), Query Frame = 1


		  
Query: 3   DSFTQTIPKESIGIKEISKKVPHWSYQLIDESEQEEMGNEKQVSWPHQIRSRSGKEVVFF 62
           DS  QT+ K  +   EI+KKVP WSY+LI E E+ E  NE+ V     IRSR  K VV F
Sbjct: 584 DSNDQTLIKNFMDFPEINKKVPRWSYKLISELEELEGENEENVPMEPGIRSRKAKRVVVF 643

Query: 63  TDKQENTDNPTPNTAD--ISEQADEVVLTRYPQESDFRRDIIKGSMRSQRRKII 115
           TDK+ + +  T N  D   S+Q DE+ L RY Q+SDFRR+IIKGSMRSQRRK +
Sbjct: 644 TDKEPHGEIYT-NLKDNQNSDQNDEMALIRYSQQSDFRREIIKGSMRSQRRKTV 696

The following BLAST results are available for this feature:

BLAST of Spo14937.1 vs. NCBI nr
BLAST of Spo14937.1 vs. UniProtKB/TrEMBL
BLAST of Spo14937.1 vs. ExPASy Swiss-Prot
BLAST of Spo14937.1 vs. TAIR (Arabidopsis)

BLAST of Spo14937.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|11497589\|ref\|NP_054996.1\|	3.5e-55	97.3	ycf1 protein [Spinacia olerace...	[more]
gi\|954580709\|ref\|XP_014614965.1\|	3.4e-34	66.6	PREDICTED: protein TIC 214-lik...	[more]
gi\|628819167\|gb\|AHY80600.1\|	3.4e-34	66.6	hypothetical chloroplast RF19 ...	[more]
gi\|836613889\|ref\|YP_009143697.1\|	1.3e-33	66.6	ycf1 protein (chloroplast) [Sa...	[more]
gi\|836613988\|ref\|YP_009143781.1\|	1.3e-33	66.6	ycf1 protein (chloroplast) [Sa...	[more]

BLAST of Spo14937.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A023ZR01_BETVU	2.4e-34	66.6	Hypothetical chloroplast RF19 ...	[more]
A0A0G2QXG6_SALEU	8.9e-34	66.6	Ycf1 protein OS=Salicornia eur...	[more]
A0A0G2QXA7_9CARY	8.9e-34	66.6	Ycf1 protein OS=Salicornia bra...	[more]
A0A0G2QXQ1_SALBI	4.4e-33	65.7	Ycf1 protein OS=Salicornia big...	[more]
A0A0G2R7Z6_MESCR	6.6e-29	61.4	Hypothetical chloroplast RF19 ...	[more]

BLAST of Spo14937.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
TI214_SPIOL	2.2e-57	97.3	Protein TIC 214 OS=Spinacia ol...	[more]
TI214_GOSHI	7.3e-29	64.5	Protein TIC 214 OS=Gossypium h...	[more]
TI214_GOSBA	1.2e-28	64.5	Protein TIC 214 OS=Gossypium b...	[more]
TI214_EUCGG	1.1e-27	60.5	Protein TIC 214 OS=Eucalyptus ...	[more]
TI214_COFAR	3.4e-26	60.1	Protein TIC 214 OS=Coffea arab...	[more]

BLAST of Spo14937.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
ATCG01130.1	9.2e-22	53.5	Ycf1 protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008896	Protein TIC214	PFAM	PF05758	Ycf1	coord: 2..114 score: 2.3
None	No IPR available	PANTHER	PTHR33163	FAMILY NOT NAMED	coord: 1..114 score: 2.2
None	No IPR available	PANTHER	PTHR33163:SF3	MEMBRANE PROTEIN YCF1-RELATED	coord: 1..114 score: 2.2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009706	chloroplast inner membrane