Spo17859 (gene) | SpinachBase

Overview


Name	Spo17859
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	BnaC04g33680D protein
Location	chr2 : 54694608 .. 54701363 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGAATTAAAAAAACAATTTCTCGTAAAAAAAAAAAACAATACTCGTATAAAAACCAATATCCTAACCTTTTCCTGTAAAACACATAAAAATCAATAGCCCGACCCTAAGAACTTTATCTTCCCTATTTCTCATCTACTCCTCAACCAAATGAAATCCTCTAGACCTCTACCCTGTACTTGCGGCCTATCTTCCCTATCCTTCTACTTTCTTCTTATCTTCTTCTAGTTTATTTCTGGAAAAAAAAAAAAACTTGTATGTTCGAAATCGATTGGTTTATATAAAGTTATGTTTGGATTAAATTATAGGATTTTGGCATATATCAAATTTGCAAGTTTTGCTGTAATATAAGCTCTTAATATTGATTCTGGGATTTTTTTTTTAAAATTTGATTAATCAATTTTCCTGGGTTTTGGTTTGAAGGAAAAGAAAAATTTCAGCTCCTGATCTACAGACGTTATTTCGAATAACGTCTGAATTTCAGTCCCTTATCCCACCTTAAATTCTATTTCAGCTCCCTACCAAACACTCCTAATCATTTAAAATGACTTATACTAATAGCACCTAATCATTTAAGGTGACTGAAAGTGTTTGACAAACAAAGCGTTAGAGTGACTATCCGCAGATGAAGGAAGAAAAGGGCATGGAATTAAAAACCACTCCTAGCACCACCATGCCAACCACCTCCACCACCAAGCGCCTCCTCTTCGACCGCCGTTACGGTTGGGTGTCAGTCTCTCTCCTCTTTCTCTCTCGCACTTACCCTTCAATCCTTACTGAAATTAGTACTCTAATAAGTAATGGCGAAATCATGCTTTTTATTTTTATTTTTTTGGGTCAGAATTGATGAATGGAAAAGCCCATCAGAAGAAGCCCTAGCTGGTGGCCGTGGAATGTAATTCCTCTACTACCCAATTTATTGTCTCAATTTTGTTAGTTTTTTTTTTTTTTATCAATTGCTTAATCTGTTCAATTTCTTTTGATTTTTTGAAATCTGTAATTAGGTTTTGCGTCGTCCCTATTGCAAAAGGATTGGTAGAAATGGCCTCTAATTCGGTGAGTTACTGTTGATTCTTTATAAATAGGGGGTTGTGGATAATTTAACCTGGGAATTTCATGCTTAAGTAGATGTACTTAATTAAACAAGCTCTGTTTAGTTGAAAGTTGATTGGTTTAAGCTAGGGTTTTTGAATTCTCTGTATTACATTTCCACTGCAGAAAGTTTCATATATCAGAATGAAATTTTAGCATTTTTGTTTAGTGTAGAATTTTGGAATGAGGAATTCTGACCCCAGTTCGATTTCGTGATTCCAAGATTTTGCGGTTATAATTTCATATAAGTTCGGTTTTTCGTGTTCCATTCTAAGCTTGCCTTCAGTGTATGATATGGAATAGGATTTGTTATACTCAAACCTAATTACATATATCCTGGATAGTGGGATCCTCGTTATATCGCTCAACCGATTTGCATTTTCACCTCAATGCATCTATCTTCATTGAAGCATAATAAAGAGACCAATTAGAACTTAGTTGTGATCGAATCACTATAAGAAAATGGATACTAGCGACACAAAACTTTCATTGTGAAAAAGGTAGTATGCTGGCAATAGCTAACTTCACTGCTTTTGTCCAATCTACTACTTCAATTTCTCTTTTTATTGTTCCATTCCCACATTAGTCTTGTTGACATGAAAAAACCCGAGAATAGAATAATGAAAATATGCTTGTTGACATACACTTTTTGTAGTGCTAGACTGCTATGCATGAGTGATGCAAATAAGGGAGAGAAAATGAGGTTGAGGTGGTTTTCTTGGTGTTTGGAACTCTTTGCTGTTGTGCTGATAACATCAATAGCATGAATTAATTCAGGCCATCACGAAATGCATTTAGCTGTCTAATTATGTAGGTGGCTTAGCCAAGTTATCTTCCCTTTCCAGCAAAACATTACTACAGTCTGCACCTCTACAGTTAAATTTAATGCTGTGTATGGGCTGCTGAGAGTGCTGACGAGTTCAGTCACGTTTATTTAGAAGAGTGTTCATTTTCGTTTCTTTAACACTCGAGCCTTGACCTAGGTTTGGTCGAGCCTAGTCCCGAGTTATTCGAGCCTAGTCCCAAGTTATTCGTGAATGTATCGGTTCCTTTTTTACCCAAGCTATTTGAATAATCATGCAGCTTGCTACCATAGCCCCTGCTTTTTGAAATAGAACCAAAATGCAGAGTCAGAAAGAGAATTCCCCATTTTTTCGGAATCATTTTGACTGGATAAAATATCTTGGTACCTTTCATTTGATGATTTTTTTCCATGTTGTAGAAAATGGGTTTCGTCCTGATCAAATTGAGCCTAAAAGAGTCCATTTGAAACTTTTTTAGTTTTTTAATATGAAGTTGCATTTTCCACCATTCATGTTATCCTTTCTGTGAACTATGGTTGGTATGGTATTTCAGCTAATGTATAAAAAGGATCAAGGTACACCGAGGCAATAGAGTTTCTTCTGTGCCAAGGCGCGCCTTTGGTGTGCCCTATTGAAGTGAGGCGTACTATAAAAAAAATTGACTGATGTGCGCCTCTTTGAAGTCGCTTCGCCTTGGAAAAGAGGCATTGCCTTAGCGTGATGAGCACCTTTTTATACACTGGTCTCAGCCGCTTCTGGAGCAGGGATTAAACATTTATTCAGTTTCTGATGGCTAGTCACTAGGTCATATGCTTGCCAATGTTTTAAAGATATCCTTATTCCTTAGGACTCGTATAGCTGTAAGGCATCCTGTTAATTGCTGATTTTTTCAGTGGGAAGCAGTTAGGATTTGGTTTAGATGCGACTATGTGAGGCTATGGTTTTAGGATAGACGTATAAAATAAAGAAAAAAAGGGATTAGGTACCTGACCTCTTCACCTTGTCTCTACTTCTCTCTTGTATACCCATGTCACACACTTGACACTTTTACAAGGTTATGAAATCCTTTACCAACATTTGTTTCTTCACCGGTTCACCCCGCCACACCACTTACGTTTTAATACAAATTGTAAATAATTATTTAAAGAGAGAGAATCCTTTCGGCCTTTCCTGATAATAGCCTGCGAATAGGCTTGACATCACAAGTTTAAATAGAATTTGCAAACAAATAAGCTGAAATTTGTTTATATATGTATTTTTAAAATAAAAAAGAAAGCATTTAAAATTTTAAAATTGGGAATATTTTCATGAATGTCAAGTTACTGCACATTTGTTCAATTTTAAAACAGTGTCTGTGTGTCTTAAACAATGCACCCATATCCAACACCCGTACCCGAGTTTGAGCAACGAAGGGACTTAGTAAGTTAGTTATGTATTTGGATTCAAGGTCTGTTATAATGTCACAACTGCTTTGGAAATACTGGGGTTTTATGAGCTGTATTACAATGCATTGGACTTATTTCTCCATACTACTCCGTAACAATTTTTGATAGACTTAGACAAGTGTTGCCTTACCTGATTGCTGAATATCAAGGTGCGTTTGTGTAAAGAACTGACTCGACTCAACTAAAAACACCCAAAAACACAATAATGAAGAAGAAGATAAATTGATTAAGGCCAGCCAAAAGGTTACAAAAGGCAGTAGCTTTAGGCTACCAATCTCCAAAAGAGTGACTTTAGGTCACAATTCACTACCTATTTCCTGCCCTTCTCTCTCTTCCTCTCTTTCTCTTTATACTAACATTCTCTACTGACTGCTCTAATGTCCTTGTTGTTTGCTGTTGTGTTGCTATTGTTGTTGGGCTGCTCTTCTTGGGCCTCATTAGTTGGGTTCATTACATAGTGAGATGAACTGATAATTTGGAGCAGAAAAATAATAATAGAAATATATTTAATTAGCTTGATGGATGAAGAACACAAGAGGGGATAAAAGTAGTGACTTGAGGCCACCAATCTCTAGGTTTAGTGACTTGAGGTCACCACTCTCCAAAGCCTAAACTTTCGCAAATTCTCAATATGCCTCTCATAACCTAATGTGCCCTTATTTATAACCATTCTACTACAACTACCTAATTTGTCTTCTACCTAATATTATTCACTACCTATTATGCCCTTCCCTTACACTTGGTTCATTACAGTTTGTGCATAGTATATTCATTTTTCTTGGCATCATGGTATGCCAAGATCTAGTTAGAGAGTATGGAAGGAAAAACAATTCCCTAGTTGTCTTGTGGAAATAGATCTTAGGAAGGCATATGATACTGTGATTGAGAGTTTTTTAGGGGAAATGTTGATTGGGCTAAAATTTCCTTCAGAGTTCATTCATCTGACTTCTCCCAAACACTCTTTGCTAGTCAATGGTTATATACTTCTATGCATGGGGTTTATTGAGGTCAAGAGAGGCTTGAAGTAGGGGGACCCTCTATTCTCTTCGTACTCTGCATGGAATATATGTCTAGGATCTTTAACGTGTTTGGGAAGCAACCAGGTTTTGGGTTTCATCCTATAGATGCAAAGCTATTACACTGACTCACACGTGTTTTGCCGATGACATCATTTTATGTCACAAGGGTGATGTTAAATCAATTAAAATGCTAATTAGTGGTTTCAAGCTGTTCACTAACAGATCTGGGCTTCAAGCTGACCGAACTACTGAAGTCTGAAATCTATTGTAGTGGCATGAGGGAAGAGGATGTTCAAGGGGCTCTGGTAATGACTAGCTTTCCTTAGGTCGTTTTCCTTTTAGATACTTGGCATTTGGGTCTCCCCATATGTTCTTAGAAGATATCTGCAGGGGGACTGTATAATGGTCATAGATAAAATGACTGCAAGGCCGGAAACTTGGAGTTCTAAGAATATTTCATTTCCTGGAAGGCTTTAACTCATTAATTGGGTTTCGATGTTTGCATGCATATTTGACACAATCTGTGTTTTTCCCTAAAAGTGTGCTAACAAAATTAATGCGCTTTGTAGAGCATATCTTTGGCATGGTAACACTCTTAGTTCAGCTCCTGTTAAAGTGAATTGACAGGATGTTTGTAAGCCAAAGAAGGCAGGAGGTTTGTGAGTGAGAGACACTATTGTGTGGAATATTTCAGCTTTGGGGAAGCATCTGTGGGCTATCAGTTCAAAACAAGATAACTTGTGGGTTATGAGGGTTCACTCTGTGTACATCGAAGGGAAGGATTGCTAGGCTTATAAGCTTCCAGAGGGACAGTAGCTGACTAGCTGGTACTTGAAGAAGTTTTGTAGTGTGAGAGAACAGATTAAGGAAGTATTAAACCTGATCTTATGGGGGTTGGTAGCAGGTATTTCTTTAAAAGTTGTTATGATTTACTCTCTCAGAAGAAGAATAATTGCTGCTGGGCTCCTGTGGTGTGGAAAAGAATAGCTATTCCAAAACATTTGCAGCCTGGGTGGCTTTTCAGCTTAGGTTGCCTACAAAGGAAGGTTACTATTACGGAGTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACTACCTACCTAGAGCCAAAAACCTCTATATTCAGGTCTTTCTCAGCTAAGATCAACACCAGATTGCTACACCTGTGCTTTTTTTTTCTTCTTCTGAAAAGTAGATCTACATAAAATCAACCCACTGGTGCTTTTCAGCACCCTGTACGTGATTTTGGTGAACCTTGTCCTTGATTTTTGCTTTTGTTAGTCTGAGTATTCTTAGGTGGTTCAATCTGACCCCAAATGTCTTGGTAAAAGTACCTTTGAGATGGAAACATAACCAAGCGAGGAGGGGTTGGTGCAGTGTCAAGAGTGGTTAGAGAGAGAAAAGTGGGAAAAAAGGTAGGTTTGTGGGCTGCATAGAGAGAGAGAAGGGTTGAAGGATTTCCATATATTTCCTTTCCTTCTCGTCCTTGATTCCTTCCCTTGAACGTAACTCATGGTTTTGTCCTTGATGCTTCGGCCAAATTGATTACCATTCCTGCTATCTACTATGTACTCTGAATCAGCATATGTAATGGTGAACATACTGATGAAAAGTAGAGAATAATTCTGCAACCTAACCCTGCTGTTTCTTGTGGCAACTGTAATTAACTGCTTAGTGCTCACAAGCGGCTCAGTTCTGTTCACTTAGCATCTGTTTCTATTTCTCTTTGTTATTAGGCGTGTCCAGTAGTAGTATTGGACTTTCGTAGTCTTTTAAAAGTGGCGAGGAAAGAATAAAGAAGATGATTAGCATAATTGCATGTATCTTTGTATCGGATGAAATATCATATACTGTTTGTTGAATTACATAAACAAACATACTATTAAAGTTAGTTTCTTGATCAAGAATAAGCTTAATTGGTGTCTTCTCAGGTAAACATGGCGGTGAACTCTGCCATTGAAATTCTCGAAAGACGTGACCATTTCAGTCCTCAGCAGTTGCAGGCCACAGTTGGCAATCAGCTTCAGCAGCTTGCAGCTTCTATGCAGAAACCAAACTTGAGCTTGTTGAAGCTTAAGGGGAAACCTGCAGAAAGTGGCAACCAACATCAACTGGAAACTGTCTAAAACTGGATTAAACCAGGGAAATTAAAACCCCTGTAGCTTAATGTGTATTATTGTGTGGTTTCAAATTTTCGATAATAGGAATTTAGGATGTTGGTGCATGTAAACAAATAAACAATACCGTTACAGCCCTTACAGGTATACAATTGACCTTCAAATTCGATTTTTTTTAATTAAATCGATTTGTTGATAGAATATTTGAGTTTATGCTTAATTCAGGTCTTATTTCAGTTGCAATTTTCAGAAATA

mRNA sequence

CTTGAATTAAAAAAACAATTTCTCGTAAAAAAAAAAAACAATACTCGTATAAAAACCAATATCCTAACCTTTTCCTGTAAAACACATAAAAATCAATAGCCCGACCCTAAGAACTTTATCTTCCCTATTTCTCATCTACTCCTCAACCAAATGAAATCCTCTAGACCTCTACCCTGTACTTGCGGCCTATCTTCCCTATCCTTCTACTTTCTTCTTATCTTCTTCTAGTTTATTTCTGGAAAAAAAAAAAAACTTGTATGTTCGAAATCGATTGGTTTATATAAAGTTATGTTTGGATTAAATTATAGGATTTTGGCATATATCAAATTTGCAAGTTTTGCTGTAATATAAGCTCTTAATATTGATTCTGGGATTTTTTTTTTAAAATTTGATTAATCAATTTTCCTGGGTTTTGGTTTGAAGGAAAAGAAAAATTTCAGCTCCTGATCTACAGACGTTATTTCGAATAACGTCTGAATTTCAGTCCCTTATCCCACCTTAAATTCTATTTCAGCTCCCTACCAAACACTCCTAATCATTTAAAATGACTTATACTAATAGCACCTAATCATTTAAGGTGACTGAAAGTGTTTGACAAACAAAGCGTTAGAGTGACTATCCGCAGATGAAGGAAGAAAAGGGCATGGAATTAAAAACCACTCCTAGCACCACCATGCCAACCACCTCCACCACCAAGCGCCTCCTCTTCGACCGCCGTTACGGTTGGGTAATTGATGAATGGAAAAGCCCATCAGAAGAAGCCCTAGCTGGTGGCCGTGGAATGTTTTGCGTCGTCCCTATTGCAAAAGGATTGGTAGAAATGGCCTCTAATTCGGTAAACATGGCGGTGAACTCTGCCATTGAAATTCTCGAAAGACGTGACCATTTCAGTCCTCAGCAGTTGCAGGCCACAGTTGGCAATCAGCTTCAGCAGCTTGCAGCTTCTATGCAGAAACCAAACTTGAGCTTGTTGAAGCTTAAGGGGAAACCTGCAGAAAGTGGCAACCAACATCAACTGGAAACTGTCTAAAACTGGATTAAACCAGGGAAATTAAAACCCCTGTAGCTTAATGTGTATTATTGTGTGGTTTCAAATTTTCGATAATAGGAATTTAGGATGTTGGTGCATGTAAACAAATAAACAATACCGTTACAGCCCTTACAGGTATACAATTGACCTTCAAATTCGATTTTTTTTAATTAAATCGATTTGTTGATAGAATATTTGAGTTTATGCTTAATTCAGGTCTTATTTCAGTTGCAATTTTCAGAAATA

Coding sequence (CDS)

ATGAAGGAAGAAAAGGGCATGGAATTAAAAACCACTCCTAGCACCACCATGCCAACCACCTCCACCACCAAGCGCCTCCTCTTCGACCGCCGTTACGGTTGGGTAATTGATGAATGGAAAAGCCCATCAGAAGAAGCCCTAGCTGGTGGCCGTGGAATGTTTTGCGTCGTCCCTATTGCAAAAGGATTGGTAGAAATGGCCTCTAATTCGGTAAACATGGCGGTGAACTCTGCCATTGAAATTCTCGAAAGACGTGACCATTTCAGTCCTCAGCAGTTGCAGGCCACAGTTGGCAATCAGCTTCAGCAGCTTGCAGCTTCTATGCAGAAACCAAACTTGAGCTTGTTGAAGCTTAAGGGGAAACCTGCAGAAAGTGGCAACCAACATCAACTGGAAACTGTCTAA

Protein sequence

MKEEKGMELKTTPSTTMPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVEMASNSVNMAVNSAIEILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKGKPAESGNQHQLETV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo17859.1	Spo17859.1	mRNA

Homology

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BLAST of Spo17859.1 vs. NCBI nr
Match: gi|902197108|gb|KNA13319.1| (hypothetical protein SOVF_115950 [Spinacia oleracea])

HSP 1 Score: 233.4 bits (594), Expect = 2.300e-58
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1


		  
Query: 17  MPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVEMASNSVNMAVN 76
           MPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVEMASNSVNMAVN
Sbjct: 1   MPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVEMASNSVNMAVN 60

Query: 77  SAIEILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKGKPAESGNQHQLETV 135
           SAIEILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKGKPAESGNQHQLETV
Sbjct: 61  SAIEILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKGKPAESGNQHQLETV 118

[Close]

BLAST of Spo17859.1 vs. NCBI nr
Match: gi|731312907|ref|XP_010676998.1| (PREDICTED: uncharacterized protein LOC104892707 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 184.1 bits (466), Expect = 1.600e-43
Identity = 97/134 (72.39%), Postives = 109/134 (81.34%), Query Frame = 1


		  
Query: 1   MKEEKGMELKTTPSTTMPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIA 60
           MK E  + L    + TMP+ S TKRLLFDRRYGWVIDEWK+PSEEALAGGRGMFCVVPIA
Sbjct: 1   MKTETTIPLPNPKNKTMPS-SNTKRLLFDRRYGWVIDEWKNPSEEALAGGRGMFCVVPIA 60

Query: 61  KGLVEMASNSVNMAVNSAIEILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKG 120
           KGLVE+AS S+N   NSAI+ILERRDH  PQ LQAT GNQLQQLAAS+QKP+ SLL  KG
Sbjct: 61  KGLVELASYSINSVANSAIKILERRDHSYPQNLQATFGNQLQQLAASIQKPDFSLLTFKG 120

Query: 121 KPAESGNQHQLETV 135
           K +ESGN  ++ETV
Sbjct: 121 KRSESGNIEEVETV 133

[Close]

BLAST of Spo17859.1 vs. NCBI nr
Match: gi|870869127|gb|KMT19913.1| (hypothetical protein BVRB_1g009600 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 179.9 bits (455), Expect = 3.000e-42
Identity = 90/115 (78.26%), Postives = 100/115 (86.96%), Query Frame = 1


		  
Query: 20  TSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVEMASNSVNMAVNSAI 79
           +S TKRLLFDRRYGWVIDEWK+PSEEALAGGRGMFCVVPIAKGLVE+AS S+N   NSAI
Sbjct: 3   SSNTKRLLFDRRYGWVIDEWKNPSEEALAGGRGMFCVVPIAKGLVELASYSINSVANSAI 62

Query: 80  EILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKGKPAESGNQHQLETV 135
           +ILERRDH  PQ LQAT GNQLQQLAAS+QKP+ SLL  KGK +ESGN  ++ETV
Sbjct: 63  KILERRDHSYPQNLQATFGNQLQQLAASIQKPDFSLLTFKGKRSESGNIEEVETV 117

[Close]

BLAST of Spo17859.1 vs. NCBI nr
Match: gi|595798457|ref|XP_007201390.1| (hypothetical protein PRUPE_ppa013205mg [Prunus persica])

HSP 1 Score: 136.3 bits (342), Expect = 3.800e-29
Identity = 73/132 (55.30%), Postives = 95/132 (71.97%), Query Frame = 1


		  
Query: 7   MELKTTP-STTMPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVE 66
           ME  T+  S T  +   +KRLLFDRRYGWVIDEWK PSEEALAGGRGMFCV+P+AK L++
Sbjct: 1   MESSTSSISMTASSNPRSKRLLFDRRYGWVIDEWKDPSEEALAGGRGMFCVLPLAKYLIK 60

Query: 67  MASNSVNMAVNSAIEILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKG----K 126
           MAS S+N+A NSA+++LER D FSPQ LQA + +Q+ ++ +S+ KP  +   LKG    K
Sbjct: 61  MASQSINLAANSAVKVLERPDLFSPQLLQAGLNDQVYKIKSSLPKPEFNYFLLKGNLSSK 120

Query: 127 PAESGNQHQLET 134
            A S +  Q E+
Sbjct: 121 AASSSSCEQTES 132

[Close]

BLAST of Spo17859.1 vs. NCBI nr
Match: gi|645264606|ref|XP_008237756.1| (PREDICTED: uncharacterized protein LOC103336488 [Prunus mume])

HSP 1 Score: 134.8 bits (338), Expect = 1.100e-28
Identity = 72/132 (54.55%), Postives = 94/132 (71.21%), Query Frame = 1


		  
Query: 7   MELKTTP-STTMPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVE 66
           ME  T+  S T  +   +KRLLFDRRYGWVIDEWK PSEEALAGGRGMFCV+P+AK L++
Sbjct: 1   MESSTSSISVTASSNPPSKRLLFDRRYGWVIDEWKDPSEEALAGGRGMFCVLPLAKSLIK 60

Query: 67  MASNSVNMAVNSAIEILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKG----K 126
           MAS S+N+A NSA++ LER D  SPQ LQA + ++L ++ +S+ KP  +   LKG    K
Sbjct: 61  MASQSINLAANSAVKALERPDLLSPQLLQAGLNDRLYKIKSSLPKPEFNYFLLKGNLSSK 120

Query: 127 PAESGNQHQLET 134
            A S ++ Q E+
Sbjct: 121 AASSSSRKQTES 132

[Close]

BLAST of Spo17859.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R304_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_115950 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 1.600e-58
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 1


		  
Query: 17  MPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVEMASNSVNMAVN 76
           MPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVEMASNSVNMAVN
Sbjct: 1   MPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVEMASNSVNMAVN 60

Query: 77  SAIEILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKGKPAESGNQHQLETV 135
           SAIEILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKGKPAESGNQHQLETV
Sbjct: 61  SAIEILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKGKPAESGNQHQLETV 118

[Close]

BLAST of Spo17859.1 vs. UniProtKB/TrEMBL
Match: A0A0J8D6R3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g009600 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.100e-42
Identity = 90/115 (78.26%), Postives = 100/115 (86.96%), Query Frame = 1


		  
Query: 20  TSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVEMASNSVNMAVNSAI 79
           +S TKRLLFDRRYGWVIDEWK+PSEEALAGGRGMFCVVPIAKGLVE+AS S+N   NSAI
Sbjct: 3   SSNTKRLLFDRRYGWVIDEWKNPSEEALAGGRGMFCVVPIAKGLVELASYSINSVANSAI 62

Query: 80  EILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKGKPAESGNQHQLETV 135
           +ILERRDH  PQ LQAT GNQLQQLAAS+QKP+ SLL  KGK +ESGN  ++ETV
Sbjct: 63  KILERRDHSYPQNLQATFGNQLQQLAASIQKPDFSLLTFKGKRSESGNIEEVETV 117

[Close]

BLAST of Spo17859.1 vs. UniProtKB/TrEMBL
Match: M5VN03_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013205mg PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 2.700e-29
Identity = 73/132 (55.30%), Postives = 95/132 (71.97%), Query Frame = 1


		  
Query: 7   MELKTTP-STTMPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVE 66
           ME  T+  S T  +   +KRLLFDRRYGWVIDEWK PSEEALAGGRGMFCV+P+AK L++
Sbjct: 1   MESSTSSISMTASSNPRSKRLLFDRRYGWVIDEWKDPSEEALAGGRGMFCVLPLAKYLIK 60

Query: 67  MASNSVNMAVNSAIEILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKG----K 126
           MAS S+N+A NSA+++LER D FSPQ LQA + +Q+ ++ +S+ KP  +   LKG    K
Sbjct: 61  MASQSINLAANSAVKVLERPDLFSPQLLQAGLNDQVYKIKSSLPKPEFNYFLLKGNLSSK 120

Query: 127 PAESGNQHQLET 134
            A S +  Q E+
Sbjct: 121 AASSSSCEQTES 132

[Close]

BLAST of Spo17859.1 vs. UniProtKB/TrEMBL
Match: A0A061FKC8_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_036290 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.700e-26
Identity = 58/96 (60.42%), Postives = 79/96 (82.29%), Query Frame = 1


		  
Query: 16  TMPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVEMASNSVNMAV 75
           T  +  ++KRLLFDRRYGWV DEWK PSEEALAGGRGMFC+VP+AK L++ ASNS+N+A 
Sbjct: 3   TTNSKPSSKRLLFDRRYGWVFDEWKDPSEEALAGGRGMFCIVPLAKALLKTASNSINVAA 62

Query: 76  NSAIEILERRDHFSPQQLQATVGNQLQQLAASMQKP 112
           +S +++LE+ D  S Q+LQA + +QLQ++ +S+QKP
Sbjct: 63  SSVVKVLEKPDLLSTQELQANLRDQLQRVTSSIQKP 98

[Close]

BLAST of Spo17859.1 vs. UniProtKB/TrEMBL
Match: D7TL80_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g03700 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 2.300e-25
Identity = 54/110 (49.09%), Postives = 85/110 (77.27%), Query Frame = 1


		  
Query: 11  TTPSTTMPTTSTTKRLLFDRRYGWVIDEWKSPSEEALAGGRGMFCVVPIAKGLVEMASNS 70
           +T ++  P+  ++KRLLFDRRYGWV DEWK PS+EAL+GGRGMFC++P+A  L++ AS S
Sbjct: 8   STSNSKPPSKPSSKRLLFDRRYGWVFDEWKDPSQEALSGGRGMFCILPLATALLKTASQS 67

Query: 71  VNMAVNSAIEILERRDHFSPQQLQATVGNQLQQLAASMQKPNLSLLKLKG 121
           +N+A N+A+++LER +  SPQ+L+A+  ++  +  +S+QKP  +L  ++G
Sbjct: 68  INLAANTAVKVLERPNLLSPQELKASFDDRFHKFMSSIQKPEFNLFAIEG 117

[Close]

BLAST of Spo17859.1 vs. TAIR (Arabidopsis)
Match: AT2G21195.2 (unknown protein)

HSP 1 Score: 63.9 bits (154), Expect = 8.500e-11
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 1


		  
Query: 36 IDEWKSPSEEALAGGRGMFCVVPIAKGLVEMASNSVNMAVNSAIE 81
          +DEWK PSEEALAGGRGMFCVVP+ K L + AS SV+  + +++E
Sbjct: 9  VDEWKDPSEEALAGGRGMFCVVPLTKTLFQTASQSVSFLLPNSME 53

The following BLAST results are available for this feature:

BLAST of Spo17859.1 vs. NCBI nr
BLAST of Spo17859.1 vs. UniProtKB/TrEMBL
BLAST of Spo17859.1 vs. ExPASy Swiss-Prot
BLAST of Spo17859.1 vs. TAIR (Arabidopsis)

BLAST of Spo17859.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902197108\|gb\|KNA13319.1\|	2.3e-58	100.	hypothetical protein SOVF_1159...	[more]
gi\|731312907\|ref\|XP_010676998.1\|	1.6e-43	72.3	PREDICTED: uncharacterized pro...	[more]
gi\|870869127\|gb\|KMT19913.1\|	3.0e-42	78.2	hypothetical protein BVRB_1g00...	[more]
gi\|595798457\|ref\|XP_007201390.1\|	3.8e-29	55.3	hypothetical protein PRUPE_ppa...	[more]
gi\|645264606\|ref\|XP_008237756.1\|	1.1e-28	54.5	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo17859.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R304_SPIOL	1.6e-58	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8D6R3_BETVU	2.1e-42	78.2	Uncharacterized protein OS=Bet...	[more]
M5VN03_PRUPE	2.7e-29	55.3	Uncharacterized protein OS=Pru...	[more]
A0A061FKC8_THECC	2.7e-26	60.4	Uncharacterized protein OS=The...	[more]
D7TL80_VITVI	2.3e-25	49.0	Putative uncharacterized prote...	[more]

BLAST of Spo17859.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0


Match Name	E-value	Identity	Description

BLAST of Spo17859.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT2G21195.2	8.5e-11	62.2	unknown protein	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006979	response to oxidative stress
biological_process	GO:0006446	regulation of translational initiation
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005829	cytosol
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009536	plastid
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003743	translation initiation factor activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046983	protein dimerization activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo19217	0.70	Barchart \| Table
Spo08114	0.69	Barchart \| Table
Spo24736	0.68	Barchart \| Table
Spo25659	0.68	Barchart \| Table
Spo23712	0.67	Barchart \| Table
Spo02696	0.67	Barchart \| Table
Spo23332	0.67	Barchart \| Table
Spo09387	0.66	Barchart \| Table
Spo03607	0.66	Barchart \| Table
Spo11688	0.66	Barchart \| Table
Spo00748	0.66	Barchart \| Table
Spo15524	0.66	Barchart \| Table
Spo16186	0.66	Barchart \| Table
Spo00677	0.66	Barchart \| Table
Spo25985	0.66	Barchart \| Table
Spo26013	0.65	Barchart \| Table
Spo06953	0.65	Barchart \| Table
Spo08494	0.65	Barchart \| Table
Spo11509	0.65	Barchart \| Table
Spo14914	0.65	Barchart \| Table