Spo21779 (gene) | SpinachBase

Overview


Name	Spo21779
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	UPF0548 protein
Location	chr2 : 57026648 .. 57028036 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTTGGCAGGAAATGGTTTTCCTAGGTTGGAATCGCCCATCCCTGAAAGATCAAAAAGCTTGCTTAGAGAAGTAAATCATTGTTTTCAGTCCTGTTTTTTATGCCGTTATAAATTTGTTCTCTTTCTTCTGTTCGTAAGGGGATTTCTTTTTGTTTCTTCTGTGTTCTTTTCAGGGCTGGTTCTTTCAACTATGATAGTAAATATAAAGGAGCTACTGCTAGACCAGTGTCTTCTCTTCAGAAAGACAAACAGTTATCAGAAGAGGGTTTTTTACTTAATCATGCTCGTGTTCAAATTGGTTCTGGTCAAGAGATATATGAGAAAGGAAAGAATGCACTTCAGAATTGGAGGTAGTGTCATCTATATCTCTCAAAATTTAGAAGATGTGAAGAAAAACCCTTATCATCAGCTATTAATTTCCGTGCTCTTTGATCATCATATGTACACAGGCATTTCCAAATGAATTGGACGTTCGTTGAATCTACTACTCCAATCAAAAGTGGGGTAAAATTTTGTGTTTGTGTCAAGGAGTTCCTGCCATGGTTGATGATGCCCCTTCAGGTGGTGTATGTGAATGAAAGCAAGAGATCTGGGAAAACGAAAGCCTCTTTCAGCTTCGGTAGTGGCACCCTTCAAGCTCATCTATTGGTCAGTATTCAGTATCCTTCCCTTCTCAGCTGCACTTCTATAACCTTTTCTGATTGAAGTTTGTACTATTAATAACTTCCATCCTCAACGCACTCACACCAGCCTCCCATGTAACAAAAGAAATGGCATGTTGTGAGACAAGTATGTCTAGAGTCCCTGACATGCTATTATTCTTGTTGCTGTAGAACTACTAACTTGATCCATTATCGTATTAAAGGGAAATACCGAAATAACATACTTTTTATGGGAATATGATTACTTTGTCATTTGCACAGTTTCCTCTTTTGTCTTGTTTTACAGATTATTCTAATGAAAAATATATATCACATTGGGTTTGTTTGCCATAACAAGGTCTAAATATTGCAGAATATTTGTCTGTGGACTTTGTCATTTCAGAATTTTGATGGCGCATTCAATGTTGTTACATAAACCTGTTTTTTTCTGCGCTTAATATGCATAGAATTGAATCTCGCCAAAAAAGCTTATATGAGACATACATTAAAGGTTCTAAAGTACCCTATTTTACCGATGTTTTTGACATTTGATCAAGCAGGCTGGGGAAGAACGCTTTTCGGTAGAGTTGGATGATAACAATCAAGTGTGGTATGAAATACTGTCCTTTTCAAAGCCAGCACATTTTCTGTCCTTCATGGGTTATCCTTATGTACAGCTTAGACAGAAGTACTTTGCGAAGAAGTCTACAGATGCTGTATTAAAACATATATCCACTGACTGA

mRNA sequence

ATGCTTTTGGCAGGAAATGGTTTTCCTAGGTTGGAATCGCCCATCCCTGAAAGATCAAAAAGCTTGCTTAGAGAAGTAAATCATTGTTTTCAGGCTGGTTCTTTCAACTATGATAGTAAATATAAAGGAGCTACTGCTAGACCAGTGTCTTCTCTTCAGAAAGACAAACAGTTATCAGAAGAGGGTTTTTTACTTAATCATGCTCGTGTTCAAATTGGTTCTGGTCAAGAGATATATGAGAAAGGAAAGAATGCACTTCAGAATTGGAGGCATTTCCAAATGAATTGGACGTTCGTTGAATCTACTACTCCAATCAAAAGTGGGGTAAAATTTTGTGTTTGTGTCAAGGAGTTCCTGCCATGGTTGATGATGCCCCTTCAGGTGGTGTATGTGAATGAAAGCAAGAGATCTGGGAAAACGAAAGCCTCTTTCAGCTTCGGTAGTGGCACCCTTCAAGCTCATCTATTGGCTGGGGAAGAACGCTTTTCGGTAGAGTTGGATGATAACAATCAAGTGTGGTATGAAATACTGTCCTTTTCAAAGCCAGCACATTTTCTGTCCTTCATGGGTTATCCTTATGTACAGCTTAGACAGAAGTACTTTGCGAAGAAGTCTACAGATGCTGTATTAAAACATATATCCACTGACTGA

Coding sequence (CDS)

ATGCTTTTGGCAGGAAATGGTTTTCCTAGGTTGGAATCGCCCATCCCTGAAAGATCAAAAAGCTTGCTTAGAGAAGTAAATCATTGTTTTCAGGCTGGTTCTTTCAACTATGATAGTAAATATAAAGGAGCTACTGCTAGACCAGTGTCTTCTCTTCAGAAAGACAAACAGTTATCAGAAGAGGGTTTTTTACTTAATCATGCTCGTGTTCAAATTGGTTCTGGTCAAGAGATATATGAGAAAGGAAAGAATGCACTTCAGAATTGGAGGCATTTCCAAATGAATTGGACGTTCGTTGAATCTACTACTCCAATCAAAAGTGGGGTAAAATTTTGTGTTTGTGTCAAGGAGTTCCTGCCATGGTTGATGATGCCCCTTCAGGTGGTGTATGTGAATGAAAGCAAGAGATCTGGGAAAACGAAAGCCTCTTTCAGCTTCGGTAGTGGCACCCTTCAAGCTCATCTATTGGCTGGGGAAGAACGCTTTTCGGTAGAGTTGGATGATAACAATCAAGTGTGGTATGAAATACTGTCCTTTTCAAAGCCAGCACATTTTCTGTCCTTCATGGGTTATCCTTATGTACAGCTTAGACAGAAGTACTTTGCGAAGAAGTCTACAGATGCTGTATTAAAACATATATCCACTGACTGA

Protein sequence

MLLAGNGFPRLESPIPERSKSLLREVNHCFQAGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIGSGQEIYEKGKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNESKRSGKTKASFSFGSGTLQAHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQKYFAKKSTDAVLKHISTD

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21779.1	Spo21779.1	mRNA

Homology

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BLAST of Spo21779.1 vs. NCBI nr
Match: gi|902203598|gb|KNA14605.1| (hypothetical protein SOVF_105710 [Spinacia oleracea])

HSP 1 Score: 381.3 bits (978), Expect = 1.100e-102
Identity = 186/195 (95.38%), Postives = 189/195 (96.92%), Query Frame = 1

		  
Query: 23  LREVNHCF-QAGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIGSGQEIYEK 82
           L++   C  +AGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIGSGQEIYEK
Sbjct: 11  LKDQKACLEKAGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIGSGQEIYEK 70

Query: 83  GKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNESKRSGKTK 142
           GKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNESKRSGKTK
Sbjct: 71  GKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNESKRSGKTK 130

Query: 143 ASFSFGSGTLQAHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQKYF 202
           ASFSFGSGTLQ HLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQKYF
Sbjct: 131 ASFSFGSGTLQGHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQKYF 190

Query: 203 AKKSTDAVLKHISTD 217
           AKKSTDAVLKHISTD
Sbjct: 191 AKKSTDAVLKHISTD 205

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BLAST of Spo21779.1 vs. NCBI nr
Match: gi|731354512|ref|XP_010688636.1| (PREDICTED: UPF0548 protein At2g17695 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 336.3 bits (861), Expect = 4.000e-89
Identity = 160/194 (82.47%), Postives = 176/194 (90.72%), Query Frame = 1

		  
Query: 23  LREVNHCFQ-AGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIGSGQEIYEK 82
           L++   C +   SFNYD + KG T R VSSLQKDK+LS++GFLLNHARVQIGSGQ+ YEK
Sbjct: 11  LKDQKACLEKTDSFNYDYECKGVTERSVSSLQKDKELSDKGFLLNHARVQIGSGQDTYEK 70

Query: 83  GKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNESKRSGKTK 142
           GKNALQNWRHFQMNWTFVE TTPIKSGVKFCVCVKEFLPWLMMPLQVVYV E+K SGK K
Sbjct: 71  GKNALQNWRHFQMNWTFVEGTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVKENKSSGKMK 130

Query: 143 ASFSFGSGTLQAHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQKYF 202
           ASFSFGSGTLQ HLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQ++F
Sbjct: 131 ASFSFGSGTLQGHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQRFF 190

Query: 203 AKKSTDAVLKHIST 216
           AK+ST+A++KH+ST
Sbjct: 191 AKESTNALIKHVST 204

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BLAST of Spo21779.1 vs. NCBI nr
Match: gi|641852549|gb|KDO71414.1| (hypothetical protein CISIN_1g028245mg [Citrus sinensis])

HSP 1 Score: 300.4 bits (768), Expect = 2.500e-78
Identity = 142/214 (66.36%), Postives = 172/214 (80.37%), Query Frame = 1

		  
Query: 1   MLLAGNGFPRLESPIPERSKSLLREVNHCFQAGSFNYDSKYKGATARPVSSLQKDKQLSE 60
           M+L G  F     P P+  K+ + +      +G FNYD+KYKGATA+PV+ L++D+ LS+
Sbjct: 1   MMLTGMVFLSWGRPTPQEQKACIDK------SGVFNYDTKYKGATAKPVACLKEDQGLSK 60

Query: 61  EGFLLNHARVQIGSGQEIYEKGKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLP 120
           +GFLLNHARV +GSG E YEKGK AL+ WRHF +NW FV+  TPI++GVKFCVCVKEFLP
Sbjct: 61  DGFLLNHARVLVGSGLETYEKGKTALKTWRHFGLNWAFVDPKTPIQNGVKFCVCVKEFLP 120

Query: 121 WLMMPLQVVYVNESKRSGKTKASFSFGSGTLQAHLLAGEERFSVELDDNNQVWYEILSFS 180
           W+ +PLQ+VYVNES R  KT ASF FGSGTLQ HLLAGEERFS+ELDDNNQVWYEI+SFS
Sbjct: 121 WVTLPLQIVYVNESIRKKKTAASFGFGSGTLQGHLLAGEERFSIELDDNNQVWYEIVSFS 180

Query: 181 KPAHFLSFMGYPYVQLRQKYFAKKSTDAVLKHIS 215
           KPA FLSF+GYPYVQLRQKYFA +S +AV KH++
Sbjct: 181 KPADFLSFIGYPYVQLRQKYFAHQSVNAVKKHLT 208

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BLAST of Spo21779.1 vs. NCBI nr
Match: gi|590702203|ref|XP_007046564.1| (UPF0548 protein [Theobroma cacao])

HSP 1 Score: 299.7 bits (766), Expect = 4.200e-78
Identity = 143/203 (70.44%), Postives = 172/203 (84.73%), Query Frame = 1

		  
Query: 14  PIPERSKSLLREVNHCFQAGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIG 73
           P PE+ KS +       ++G+FNYD+KYKGATA+PVS +++DK+LS++G+L+NHARV +G
Sbjct: 9   PSPEQQKSCIN------KSGTFNYDTKYKGATAKPVSCIKEDKELSKDGYLVNHARVLVG 68

Query: 74  SGQEIYEKGKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNE 133
           SG + YEKGK ALQNWRHF +NW FV+  TPI++GVKFCVCVKEFLPW+MMPLQVVYV E
Sbjct: 69  SGLQTYEKGKAALQNWRHFGLNWAFVDPKTPIQNGVKFCVCVKEFLPWVMMPLQVVYVKE 128

Query: 134 SKRSGKTK---ASFSFGSGTLQAHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMG 193
           SK S KTK   ASF FGSGTLQ HLLAGEERFS+ELD+N+QVWYEILSFSKPAHFLSF+G
Sbjct: 129 SK-SAKTKKAVASFGFGSGTLQGHLLAGEERFSIELDENDQVWYEILSFSKPAHFLSFIG 188

Query: 194 YPYVQLRQKYFAKKSTDAVLKHI 214
           YPYV LRQKYFA +S +AVL H+
Sbjct: 189 YPYVYLRQKYFAHQSANAVLNHV 204

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BLAST of Spo21779.1 vs. NCBI nr
Match: gi|694439560|ref|XP_009346656.1| (PREDICTED: UPF0548 protein At2g17695-like [Pyrus x bretschneideri])

HSP 1 Score: 298.9 bits (764), Expect = 7.200e-78
Identity = 137/201 (68.16%), Postives = 169/201 (84.08%), Query Frame = 1

		  
Query: 14  PIPERSKSLLREVNHCFQAGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIG 73
           P P+  K+ +       ++GSFNYD K+KGATA+ +SSLQ+DK LS++GFLLNH+R  +G
Sbjct: 9   PTPQEQKACID------RSGSFNYDPKFKGATAKSLSSLQEDKGLSKDGFLLNHSRNLVG 68

Query: 74  SGQEIYEKGKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNE 133
           SG + YEKGK ALQ+WRHF +NW FV+  TP+++GVKFCVCVKEFLPW+MMPLQVVYVNE
Sbjct: 69  SGLDTYEKGKTALQDWRHFGLNWAFVDPKTPVQNGVKFCVCVKEFLPWIMMPLQVVYVNE 128

Query: 134 SKRSGKTKASFSFGSGTLQAHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPY 193
           +KRS +  ASF FG GTLQ HLLAGEERFS+ELD+NNQVWYEILSFSKPAH LSF+GYPY
Sbjct: 129 NKRSKQAMASFRFGGGTLQGHLLAGEERFSIELDENNQVWYEILSFSKPAHLLSFIGYPY 188

Query: 194 VQLRQKYFAKKSTDAVLKHIS 215
           V LRQKYFA +ST+A++KH++
Sbjct: 189 VMLRQKYFAHQSTNAIMKHLN 203

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BLAST of Spo21779.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R533_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_105710 PE=4 SV=1)

HSP 1 Score: 381.3 bits (978), Expect = 7.600e-103
Identity = 186/195 (95.38%), Postives = 189/195 (96.92%), Query Frame = 1

		  
Query: 23  LREVNHCF-QAGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIGSGQEIYEK 82
           L++   C  +AGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIGSGQEIYEK
Sbjct: 11  LKDQKACLEKAGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIGSGQEIYEK 70

Query: 83  GKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNESKRSGKTK 142
           GKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNESKRSGKTK
Sbjct: 71  GKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNESKRSGKTK 130

Query: 143 ASFSFGSGTLQAHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQKYF 202
           ASFSFGSGTLQ HLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQKYF
Sbjct: 131 ASFSFGSGTLQGHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQKYF 190

Query: 203 AKKSTDAVLKHISTD 217
           AKKSTDAVLKHISTD
Sbjct: 191 AKKSTDAVLKHISTD 205

[Close]

BLAST of Spo21779.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BMU3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g202540 PE=4 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.800e-89
Identity = 160/194 (82.47%), Postives = 176/194 (90.72%), Query Frame = 1

		  
Query: 23  LREVNHCFQ-AGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIGSGQEIYEK 82
           L++   C +   SFNYD + KG T R VSSLQKDK+LS++GFLLNHARVQIGSGQ+ YEK
Sbjct: 11  LKDQKACLEKTDSFNYDYECKGVTERSVSSLQKDKELSDKGFLLNHARVQIGSGQDTYEK 70

Query: 83  GKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNESKRSGKTK 142
           GKNALQNWRHFQMNWTFVE TTPIKSGVKFCVCVKEFLPWLMMPLQVVYV E+K SGK K
Sbjct: 71  GKNALQNWRHFQMNWTFVEGTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVKENKSSGKMK 130

Query: 143 ASFSFGSGTLQAHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQKYF 202
           ASFSFGSGTLQ HLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQ++F
Sbjct: 131 ASFSFGSGTLQGHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQRFF 190

Query: 203 AKKSTDAVLKHIST 216
           AK+ST+A++KH+ST
Sbjct: 191 AKESTNALIKHVST 204

[Close]

BLAST of Spo21779.1 vs. UniProtKB/TrEMBL
Match: A0A067FVI3_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g028245mg PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 1.700e-78
Identity = 142/214 (66.36%), Postives = 172/214 (80.37%), Query Frame = 1

		  
Query: 1   MLLAGNGFPRLESPIPERSKSLLREVNHCFQAGSFNYDSKYKGATARPVSSLQKDKQLSE 60
           M+L G  F     P P+  K+ + +      +G FNYD+KYKGATA+PV+ L++D+ LS+
Sbjct: 1   MMLTGMVFLSWGRPTPQEQKACIDK------SGVFNYDTKYKGATAKPVACLKEDQGLSK 60

Query: 61  EGFLLNHARVQIGSGQEIYEKGKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLP 120
           +GFLLNHARV +GSG E YEKGK AL+ WRHF +NW FV+  TPI++GVKFCVCVKEFLP
Sbjct: 61  DGFLLNHARVLVGSGLETYEKGKTALKTWRHFGLNWAFVDPKTPIQNGVKFCVCVKEFLP 120

Query: 121 WLMMPLQVVYVNESKRSGKTKASFSFGSGTLQAHLLAGEERFSVELDDNNQVWYEILSFS 180
           W+ +PLQ+VYVNES R  KT ASF FGSGTLQ HLLAGEERFS+ELDDNNQVWYEI+SFS
Sbjct: 121 WVTLPLQIVYVNESIRKKKTAASFGFGSGTLQGHLLAGEERFSIELDDNNQVWYEIVSFS 180

Query: 181 KPAHFLSFMGYPYVQLRQKYFAKKSTDAVLKHIS 215
           KPA FLSF+GYPYVQLRQKYFA +S +AV KH++
Sbjct: 181 KPADFLSFIGYPYVQLRQKYFAHQSVNAVKKHLT 208

[Close]

BLAST of Spo21779.1 vs. UniProtKB/TrEMBL
Match: A0A061DGD7_THECC (UPF0548 protein OS=Theobroma cacao GN=TCM_000110 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.900e-78
Identity = 143/203 (70.44%), Postives = 172/203 (84.73%), Query Frame = 1

		  
Query: 14  PIPERSKSLLREVNHCFQAGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIG 73
           P PE+ KS +       ++G+FNYD+KYKGATA+PVS +++DK+LS++G+L+NHARV +G
Sbjct: 9   PSPEQQKSCIN------KSGTFNYDTKYKGATAKPVSCIKEDKELSKDGYLVNHARVLVG 68

Query: 74  SGQEIYEKGKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNE 133
           SG + YEKGK ALQNWRHF +NW FV+  TPI++GVKFCVCVKEFLPW+MMPLQVVYV E
Sbjct: 69  SGLQTYEKGKAALQNWRHFGLNWAFVDPKTPIQNGVKFCVCVKEFLPWVMMPLQVVYVKE 128

Query: 134 SKRSGKTK---ASFSFGSGTLQAHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMG 193
           SK S KTK   ASF FGSGTLQ HLLAGEERFS+ELD+N+QVWYEILSFSKPAHFLSF+G
Sbjct: 129 SK-SAKTKKAVASFGFGSGTLQGHLLAGEERFSIELDENDQVWYEILSFSKPAHFLSFIG 188

Query: 194 YPYVQLRQKYFAKKSTDAVLKHI 214
           YPYV LRQKYFA +S +AVL H+
Sbjct: 189 YPYVYLRQKYFAHQSANAVLNHV 204

[Close]

BLAST of Spo21779.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QL28_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G004700 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 1.900e-77
Identity = 137/202 (67.82%), Postives = 174/202 (86.14%), Query Frame = 1

		  
Query: 14  PIPERSKSLLREVNHCFQAGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIG 73
           P PE+ KS +       ++G+FNYD+KYKGAT++PVS +++DK+LS++G+L+NHARV IG
Sbjct: 9   PSPEQQKSCIN------KSGAFNYDTKYKGATSKPVSCIKEDKELSKDGYLINHARVLIG 68

Query: 74  SGQEIYEKGKNALQNWRHFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNE 133
           SG E YEKGK ALQNW+HF ++W FV+  TPI++GVKFCVC+KEFLPW++MPLQVVYVNE
Sbjct: 69  SGFETYEKGKTALQNWKHFGLDWAFVDPKTPIQNGVKFCVCLKEFLPWVIMPLQVVYVNE 128

Query: 134 SKR--SGKTKASFSFGSGTLQAHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGY 193
           + R  + K+ ASF FGSGTLQ HLLAGEERF++ELD+N+QVWYE+LSFSKPAHFLS +GY
Sbjct: 129 NTRAKTKKSLASFGFGSGTLQGHLLAGEERFTIELDENDQVWYEVLSFSKPAHFLSIIGY 188

Query: 194 PYVQLRQKYFAKKSTDAVLKHI 214
           PYVQLRQKYFA +ST+AVLKH+
Sbjct: 189 PYVQLRQKYFAHQSTNAVLKHV 204

[Close]

BLAST of Spo21779.1 vs. ExPASy Swiss-Prot
Match: U548_ARATH (UPF0548 protein At2g17695 OS=Arabidopsis thaliana GN=At2g17695 PE=2 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 2.400e-73
Identity = 118/184 (64.13%), Postives = 159/184 (86.41%), Query Frame = 1

		  
Query: 31  QAGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIGSGQEIYEKGKNALQNWR 90
           + G+FNYD+KY+G ++R ++ L++D ++ ++GFL+NHARV +GSG+E YEKGK ALQNW+
Sbjct: 20  KTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVLVGSGRESYEKGKKALQNWK 79

Query: 91  HFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNESKRSGKTKASFSFGSGT 150
           HF M+W FV+  TP+++G KFC+CVKE LPW+M+PLQVVYV+ES++S K  A F +GSGT
Sbjct: 80  HFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYVDESRKSRKGPAHFGYGSGT 139

Query: 151 LQAHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQKYFAKKSTDAVL 210
           LQ HLLAGEE+FS+ELD N +VWYEI SFSKPAHFLSF+GYPYV+LRQK+FA+ S++AVL
Sbjct: 140 LQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGYPYVKLRQKHFARHSSEAVL 199

Query: 211 KHIS 215
           KH++
Sbjct: 200 KHVN 203

[Close]

BLAST of Spo21779.1 vs. ExPASy Swiss-Prot
Match: U548_DICDI (UPF0548 protein OS=Dictyostelium discoideum GN=DDB_G0271742 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 9.800e-19
Identity = 57/191 (29.84%), Postives = 99/191 (51.83%), Query Frame = 1

		  
Query: 35  FNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIGSGQEIYEKGKNALQNWRHFQM 94
           F Y + Y           + D + S   F ++  ++Q+G+G E ++K   AL+ W+HF +
Sbjct: 24  FAYSNLYGTQDYATKEEYEMDPKYSN--FDVDQVKIQLGTGVECFQKAVAALKQWKHFDL 83

Query: 95  NWT-FVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNES-KRSGKTKASFSFGSGTLQ 154
           +W  F    TPI  G    +  K+   W++   ++ Y+ +  +  G  K  +S+G  TL+
Sbjct: 84  DWVDFYFKNTPIAVGETVGILSKQVGFWILSFARINYLYDGDQEDGSIKFGYSYG--TLK 143

Query: 155 AHLLAGEERFSVE-------LDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQKYFAKKS 214
            H+  GEERF +E         D   V+YE+LSFS+P+++LS +GYP  +  Q  F   S
Sbjct: 144 DHVEKGEERFVIEWVRDPDGAPDKGAVYYEMLSFSEPSYWLSQLGYPVTRYFQNKFVVDS 203

Query: 215 TDAVLKHISTD 217
            + +LK + ++
Sbjct: 204 CNQMLKAVGSN 210

[Close]

BLAST of Spo21779.1 vs. ExPASy Swiss-Prot
Match: Y2035_DEIRA (UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=DR_2035 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 1.500e-11
Identity = 50/148 (33.78%), Postives = 77/148 (52.03%), Query Frame = 1

		  
Query: 69  RVQIGSGQEIYEKGKNALQNWRHFQMNWTFV---ESTTPI-KSGVKFCVCVKEFLPW--- 128
           RV++G G+  +E+ K AL+  + FQ +W      E++TP+ + G    + V+ F PW   
Sbjct: 47  RVRVGEGEACWERAKAALRGGQMFQ-DWVLRPHGEASTPLSRQGATVVLLVRHFGPWGRR 106

Query: 129 -----LMMPLQVVY-VNESKRSGKTKASFSFGSGTLQAHLLAGEERFSVELDDNNQVWYE 188
                 +M  +V+Y V+E  R G       FG GTL  HL+ GEERF +E D    VW++
Sbjct: 107 KWGLYSLMTNRVLYLVDEPDRYG-------FGYGTLPGHLVRGEERFLLERDAGGAVWFD 166

Query: 189 ILSFSKPAHFLSFMGYPYVQLRQKYFAK 204
           + +FS+ A   S    P V   Q+  A+
Sbjct: 167 LTTFSRAALPFSRFAQPLVGAAQRRGAR 186

[Close]

BLAST of Spo21779.1 vs. TAIR (Arabidopsis)
Match: AT2G17695.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 276.6 bits (706), Expect = 1.300e-74
Identity = 118/184 (64.13%), Postives = 159/184 (86.41%), Query Frame = 1

		  
Query: 31  QAGSFNYDSKYKGATARPVSSLQKDKQLSEEGFLLNHARVQIGSGQEIYEKGKNALQNWR 90
           + G+FNYD+KY+G ++R ++ L++D ++ ++GFL+NHARV +GSG+E YEKGK ALQNW+
Sbjct: 20  KTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVLVGSGRESYEKGKKALQNWK 79

Query: 91  HFQMNWTFVESTTPIKSGVKFCVCVKEFLPWLMMPLQVVYVNESKRSGKTKASFSFGSGT 150
           HF M+W FV+  TP+++G KFC+CVKE LPW+M+PLQVVYV+ES++S K  A F +GSGT
Sbjct: 80  HFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYVDESRKSRKGPAHFGYGSGT 139

Query: 151 LQAHLLAGEERFSVELDDNNQVWYEILSFSKPAHFLSFMGYPYVQLRQKYFAKKSTDAVL 210
           LQ HLLAGEE+FS+ELD N +VWYEI SFSKPAHFLSF+GYPYV+LRQK+FA+ S++AVL
Sbjct: 140 LQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGYPYVKLRQKHFARHSSEAVL 199

Query: 211 KHIS 215
           KH++
Sbjct: 200 KHVN 203

The following BLAST results are available for this feature:

BLAST of Spo21779.1 vs. NCBI nr
BLAST of Spo21779.1 vs. UniProtKB/TrEMBL
BLAST of Spo21779.1 vs. ExPASy Swiss-Prot
BLAST of Spo21779.1 vs. TAIR (Arabidopsis)

BLAST of Spo21779.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902203598\|gb\|KNA14605.1\|	1.1e-102	95.3	hypothetical protein SOVF_1057...	[more]
gi\|731354512\|ref\|XP_010688636.1\|	4.0e-89	82.4	PREDICTED: UPF0548 protein At2...	[more]
gi\|641852549\|gb\|KDO71414.1\|	2.5e-78	66.3	hypothetical protein CISIN_1g0...	[more]
gi\|590702203\|ref\|XP_007046564.1\|	4.2e-78	70.4	UPF0548 protein [Theobroma cac...	[more]
gi\|694439560\|ref\|XP_009346656.1\|	7.2e-78	68.1	PREDICTED: UPF0548 protein At2...	[more]

BLAST of Spo21779.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9R533_SPIOL	7.6e-103	95.3	Uncharacterized protein OS=Spi...	[more]
A0A0J8BMU3_BETVU	2.8e-89	82.4	Uncharacterized protein OS=Bet...	[more]
A0A067FVI3_CITSI	1.7e-78	66.3	Uncharacterized protein OS=Cit...	[more]
A0A061DGD7_THECC	2.9e-78	70.4	UPF0548 protein OS=Theobroma c...	[more]
A0A0D2QL28_GOSRA	1.9e-77	67.8	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo21779.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3

Position :

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x 1


Match Name	E-value	Identity	Description
U548_ARATH	2.4e-73	64.1	UPF0548 protein At2g17695 OS=A...	[more]
U548_DICDI	9.8e-19	29.8	UPF0548 protein OS=Dictyosteli...	[more]
Y2035_DEIRA	1.5e-11	33.7	UPF0548 protein DR_2035 OS=Dei...	[more]

BLAST of Spo21779.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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x 1


Match Name	E-value	Identity	Description
AT2G17695.1	1.3e-74	64.1	FUNCTIONS IN: molecular_functi...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018960	Domain of unknown function DUF1990	PFAM	PF09348	DUF1990	coord: 61..207 score: 7.0
None	No IPR available	PANTHER	PTHR34202	FAMILY NOT NAMED	coord: 31..215 score: 1.1
None	No IPR available	PANTHER	PTHR34202:SF1	UPF0548 PROTEIN	coord: 31..215 score: 1.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009058	biosynthetic process
biological_process	GO:0044085	cellular component biogenesis
biological_process	GO:0008152	metabolic process
biological_process	GO:0044281	small molecule metabolic process
biological_process	GO:0009639	response to red or far red light
biological_process	GO:0015991	ATP hydrolysis coupled proton transport
biological_process	GO:0019684	photosynthesis, light reaction
biological_process	GO:1901564	organonitrogen compound metabolic process
biological_process	GO:1901576	organic substance biosynthetic process
biological_process	GO:0006139	nucleobase-containing compound metabolic process
biological_process	GO:0019682	glyceraldehyde-3-phosphate metabolic process
biological_process	GO:0051186	cofactor metabolic process
biological_process	GO:0016043	cellular component organization
biological_process	GO:0044249	cellular biosynthetic process
cellular_component	GO:0044425	membrane part
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0019031	viral envelope
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0031410	cytoplasmic vesicle
cellular_component	GO:0033179	proton-transporting V-type ATPase, V0 domain
cellular_component	GO:0034357	photosynthetic membrane
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0051082	unfolded protein binding
molecular_function	GO:0031072	heat shock protein binding
molecular_function	GO:0030170	pyridoxal phosphate binding
molecular_function	GO:0016829	lyase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo16996	0.73	Barchart \| Table
Spo07390	0.71	Barchart \| Table
Spo24736	0.70	Barchart \| Table
Spo08997	0.70	Barchart \| Table
Spo03251	0.68	Barchart \| Table
Spo27062	0.67	Barchart \| Table
Spo14942	0.67	Barchart \| Table
Spo24590	0.67	Barchart \| Table
Spo25244	0.67	Barchart \| Table
Spo00677	0.66	Barchart \| Table
Spo14779	0.66	Barchart \| Table
Spo25230	0.66	Barchart \| Table
Spo10923	0.66	Barchart \| Table
Spo23772	0.65	Barchart \| Table
Spo03195	0.65	Barchart \| Table