Spo01156 (gene) | SpinachBase

Overview


Name	Spo01156
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	SAUR-like auxin-responsive protein family
Location	chr2 : 57894836 .. 57895234 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGGCAAATCTTAACCTATATCTGCCCCACAAGAAGCAGCAACAGCCGCAGCAGCAGAATCAAGGTTCATCAAAGGGTGGTGGTGGTGGTGGCGGCGGCGGAATTGGCGTTCCAAAGGGTTGTTTGGCCATTAAAGTGGGCCACACAAATGAAGAACAGCAGAGGTTTGTGGTGCCTGTCGTGTACTTTAACCACCCTCTCTTTATGAAGCTTCTCAAAGAAGCTGAGGAAGAGTACGGTTTTGATCAGAAAGGTACAATCACCATTCCCTGCCACGTGGAGGAATTTCGTTATGTGCAGGGTTTGATTGATCAGGAGAAATCTGTTCTTCATCACCACCACCACCACAACCATCATGATCATCACAATCCTATTGTTGGCTGTTTTAGGGCTTGA

mRNA sequence

ATGGGGGCAAATCTTAACCTATATCTGCCCCACAAGAAGCAGCAACAGCCGCAGCAGCAGAATCAAGGTTCATCAAAGGGTGGTGGTGGTGGTGGCGGCGGCGGAATTGGCGTTCCAAAGGGTTGTTTGGCCATTAAAGTGGGCCACACAAATGAAGAACAGCAGAGGTTTGTGGTGCCTGTCGTGTACTTTAACCACCCTCTCTTTATGAAGCTTCTCAAAGAAGCTGAGGAAGAGTACGGTTTTGATCAGAAAGGTACAATCACCATTCCCTGCCACGTGGAGGAATTTCGTTATGTGCAGGGTTTGATTGATCAGGAGAAATCTGTTCTTCATCACCACCACCACCACAACCATCATGATCATCACAATCCTATTGTTGGCTGTTTTAGGGCTTGA

Coding sequence (CDS)

ATGGGGGCAAATCTTAACCTATATCTGCCCCACAAGAAGCAGCAACAGCCGCAGCAGCAGAATCAAGGTTCATCAAAGGGTGGTGGTGGTGGTGGCGGCGGCGGAATTGGCGTTCCAAAGGGTTGTTTGGCCATTAAAGTGGGCCACACAAATGAAGAACAGCAGAGGTTTGTGGTGCCTGTCGTGTACTTTAACCACCCTCTCTTTATGAAGCTTCTCAAAGAAGCTGAGGAAGAGTACGGTTTTGATCAGAAAGGTACAATCACCATTCCCTGCCACGTGGAGGAATTTCGTTATGTGCAGGGTTTGATTGATCAGGAGAAATCTGTTCTTCATCACCACCACCACCACAACCATCATGATCATCACAATCCTATTGTTGGCTGTTTTAGGGCTTGA

Protein sequence

MGANLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVPVVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHHDHHNPIVGCFRA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo01156.1	Spo01156.1	mRNA

Homology

[Close]

BLAST of Spo01156.1 vs. NCBI nr
Match: gi|902229530|gb|KNA21534.1| (hypothetical protein SOVF_042280 [Spinacia oleracea])

HSP 1 Score: 277.3 bits (708), Expect = 1.400e-71
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1

		  
Query: 1   MGANLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVP 60
           MGANLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVP
Sbjct: 1   MGANLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVP 60

Query: 61  VVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHH 120
           VVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHH
Sbjct: 61  VVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHH 120

Query: 121 DHHNPIVGCFRA 133
           DHHNPIVGCFRA
Sbjct: 121 DHHNPIVGCFRA 132

[Close]

BLAST of Spo01156.1 vs. NCBI nr
Match: gi|731311158|ref|XP_010692322.1| (PREDICTED: auxin-induced protein X15 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 211.8 bits (538), Expect = 7.000e-52
Identity = 106/136 (77.94%), Postives = 116/136 (85.29%), Query Frame = 1

		  
Query: 1   MGANLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVP 60
           MG N +L+LPHKKQQQ    NQGSSKGG       IG+PKGCLAIKVGHTNEEQQRFVVP
Sbjct: 1   MGGNFHLHLPHKKQQQ----NQGSSKGG-------IGIPKGCLAIKVGHTNEEQQRFVVP 60

Query: 61  VVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLH-HHHHHNH 120
           VVYFNHPLFM+LLKEAEEEYGFDQKGTITIPCHVEEFRYVQ LID+EK + H HHHHH+H
Sbjct: 61  VVYFNHPLFMRLLKEAEEEYGFDQKGTITIPCHVEEFRYVQDLIDREKCLHHDHHHHHHH 120

Query: 121 HDHH---NPIVGCFRA 133
           H+HH   NP+VGCF+A
Sbjct: 121 HEHHHLPNPLVGCFKA 125

[Close]

BLAST of Spo01156.1 vs. NCBI nr
Match: gi|823208982|ref|XP_012437801.1| (PREDICTED: auxin-induced protein X15-like [Gossypium raimondii])

HSP 1 Score: 162.5 bits (410), Expect = 4.900e-37
Identity = 82/128 (64.06%), Postives = 93/128 (72.66%), Query Frame = 1

		  
Query: 4   NLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVPVVY 63
           N +L++PH        Q +  +KG          VPKGCLAIKVG   EEQQRFVVPV+Y
Sbjct: 10  NFHLHIPHLHHHHHHHQGKKQAKG----------VPKGCLAIKVGPKEEEQQRFVVPVLY 69

Query: 64  FNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHHDHH 123
           FNHPLFM+LLKEAEEEYGF+QKG ITIPCHVEEFR V+GLID EKS+ HHHHHH+HH   
Sbjct: 70  FNHPLFMQLLKEAEEEYGFEQKGMITIPCHVEEFRNVRGLIDGEKSLHHHHHHHHHH--- 121

Query: 124 NPIVGCFR 132
              VGCFR
Sbjct: 130 ---VGCFR 121

[Close]

BLAST of Spo01156.1 vs. NCBI nr
Match: gi|729355427|ref|XP_010544871.1| (PREDICTED: auxin-induced protein 15A-like [Tarenaya hassleriana])

HSP 1 Score: 162.5 bits (410), Expect = 4.900e-37
Identity = 83/129 (64.34%), Postives = 93/129 (72.09%), Query Frame = 1

		  
Query: 4   NLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVPVVY 63
           + NL+LPH K    Q                   VPKGCLAIKVG   EEQQR +VPVVY
Sbjct: 10  SFNLHLPHLKSSSKQAIKD---------------VPKGCLAIKVGQ-GEEQQRIIVPVVY 69

Query: 64  FNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHHDHH 123
           FNHPLFM+LLKEAEEEYGF+QKGTITIPCHVEEFRYVQ +ID+E+SV +HHHHH HH HH
Sbjct: 70  FNHPLFMQLLKEAEEEYGFEQKGTITIPCHVEEFRYVQSMIDRERSVSYHHHHHYHHHHH 122

Query: 124 N-PIVGCFR 132
              +VGCFR
Sbjct: 130 QYHLVGCFR 122

[Close]

BLAST of Spo01156.1 vs. NCBI nr
Match: gi|596005129|ref|XP_007218348.1| (hypothetical protein PRUPE_ppa010986mg [Prunus persica])

HSP 1 Score: 161.4 bits (407), Expect = 1.100e-36
Identity = 84/128 (65.62%), Postives = 95/128 (74.22%), Query Frame = 1

		  
Query: 4   NLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVPVVY 63
           N +L+LPH         + G  K G         VPKGCLAIKVG   EEQQRFVVPV+Y
Sbjct: 112 NFHLHLPHLHLHHHHHSHHGGKKQGIRD------VPKGCLAIKVGQ-GEEQQRFVVPVIY 171

Query: 64  FNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHHDHH 123
           FNHPLF++LLKEAEEEYGFDQKGTITIPCHVEEFRYVQG+ID+EKS+ H HHHH+HH   
Sbjct: 172 FNHPLFIQLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGMIDREKSLHHPHHHHHHH--- 227

Query: 124 NPIVGCFR 132
             +VGCFR
Sbjct: 232 --VVGCFR 227

[Close]

BLAST of Spo01156.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RRJ6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_042280 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 9.500e-72
Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 1

		  
Query: 1   MGANLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVP 60
           MGANLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVP
Sbjct: 1   MGANLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVP 60

Query: 61  VVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHH 120
           VVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHH
Sbjct: 61  VVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHH 120

Query: 121 DHHNPIVGCFRA 133
           DHHNPIVGCFRA
Sbjct: 121 DHHNPIVGCFRA 132

[Close]

BLAST of Spo01156.1 vs. UniProtKB/TrEMBL
Match: A0A0D2SYI3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G128100 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 3.400e-37
Identity = 82/128 (64.06%), Postives = 93/128 (72.66%), Query Frame = 1

		  
Query: 4   NLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVPVVY 63
           N +L++PH        Q +  +KG          VPKGCLAIKVG   EEQQRFVVPV+Y
Sbjct: 10  NFHLHIPHLHHHHHHHQGKKQAKG----------VPKGCLAIKVGPKEEEQQRFVVPVLY 69

Query: 64  FNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHHDHH 123
           FNHPLFM+LLKEAEEEYGF+QKG ITIPCHVEEFR V+GLID EKS+ HHHHHH+HH   
Sbjct: 70  FNHPLFMQLLKEAEEEYGFEQKGMITIPCHVEEFRNVRGLIDGEKSLHHHHHHHHHH--- 121

Query: 124 NPIVGCFR 132
              VGCFR
Sbjct: 130 ---VGCFR 121

[Close]

BLAST of Spo01156.1 vs. UniProtKB/TrEMBL
Match: M5X0E8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010986mg PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 7.600e-37
Identity = 84/128 (65.62%), Postives = 95/128 (74.22%), Query Frame = 1

		  
Query: 4   NLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVPVVY 63
           N +L+LPH         + G  K G         VPKGCLAIKVG   EEQQRFVVPV+Y
Sbjct: 112 NFHLHLPHLHLHHHHHSHHGGKKQGIRD------VPKGCLAIKVGQ-GEEQQRFVVPVIY 171

Query: 64  FNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHHDHH 123
           FNHPLF++LLKEAEEEYGFDQKGTITIPCHVEEFRYVQG+ID+EKS+ H HHHH+HH   
Sbjct: 172 FNHPLFIQLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGMIDREKSLHHPHHHHHHH--- 227

Query: 124 NPIVGCFR 132
             +VGCFR
Sbjct: 232 --VVGCFR 227

[Close]

BLAST of Spo01156.1 vs. UniProtKB/TrEMBL
Match: R0FQV0_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10018241mg PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 8.400e-36
Identity = 73/95 (76.84%), Postives = 84/95 (88.42%), Query Frame = 1

		  
Query: 38  VPKGCLAIKVGHTNEEQQRFVVPVVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEF 97
           VPKGCLAIKVG   EE+QRFVVPVVYFNHPLFM+LL+EAEEEYGF+QKGTITIPCHVE F
Sbjct: 30  VPKGCLAIKVGSKEEERQRFVVPVVYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVF 89

Query: 98  RYVQGLIDQEKSVLHHHHHHNHHDHHNPIVGCFRA 133
           RYVQ +ID+E+SV +H +HH+ H  HN +VGCFRA
Sbjct: 90  RYVQDMIDRERSVNYHSNHHHDHHSHNHLVGCFRA 124

[Close]

BLAST of Spo01156.1 vs. UniProtKB/TrEMBL
Match: A0A0D2QRQ4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G044200 PE=4 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.600e-34
Identity = 81/128 (63.28%), Postives = 91/128 (71.09%), Query Frame = 1

		  
Query: 4   NLNLYLPHKKQQQPQQQNQGSSKGGGGGGGGGIGVPKGCLAIKVGHTNEEQQRFVVPVVY 63
           N +L+LPH      Q Q QG  +G          VPKGCLAIKVG   EEQQRFVVPV+Y
Sbjct: 10  NFHLHLPHLHLHHHQHQ-QGKKQGSD--------VPKGCLAIKVGSEGEEQQRFVVPVIY 69

Query: 64  FNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEFRYVQGLIDQEKSVLHHHHHHNHHDHH 123
           FNHPLFM+LLKEAEEEYGFDQKGTITIPC+V+EFR V+GLID+E S+ HHHHHH      
Sbjct: 70  FNHPLFMQLLKEAEEEYGFDQKGTITIPCNVQEFRNVRGLIDRENSLHHHHHHH------ 120

Query: 124 NPIVGCFR 132
              V CFR
Sbjct: 130 --YVWCFR 120

[Close]

BLAST of Spo01156.1 vs. ExPASy Swiss-Prot
Match: SAU32_ARATH (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana GN=SAUR32 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.900e-37
Identity = 74/98 (75.51%), Postives = 83/98 (84.69%), Query Frame = 1

		  
Query: 38  VPKGCLAIKVGHTNEEQQRFVVPVVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEF 97
           VPKGCLAIKVG   EEQQRF+VPV+YFNHPLFM+LLKEAE+EYGFDQKGTITIPCHVEEF
Sbjct: 24  VPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEF 83

Query: 98  RYVQGLIDQEKSVL---HHHHHHNHHDHHNPIVGCFRA 133
           RYVQ LID E+SV    +HHH H   D ++ +VGCFRA
Sbjct: 84  RYVQALIDGERSVYNGNNHHHRHGGRDQYHHLVGCFRA 121

[Close]

BLAST of Spo01156.1 vs. ExPASy Swiss-Prot
Match: SAU36_ARATH (Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana GN=SAUR36 PE=2 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 7.600e-14
Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1

		  
Query: 38  VPKGCLAIKVGHTNEEQQRFVVPVVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEF 97
           VP+G LAI VG  + +  R +VP+VYFNHPLF +LL+EAE+EYGF  +G ITIPC   +F
Sbjct: 79  VPRGHLAIYVGQKDGDCHRVLVPIVYFNHPLFGELLREAEKEYGFCHEGGITIPCLYSDF 138

Query: 98  RYVQ 102
             V+
Sbjct: 139 ERVK 142

[Close]

BLAST of Spo01156.1 vs. ExPASy Swiss-Prot
Match: SAU15_ARATH (Auxin-responsive protein SAUR15 OS=Arabidopsis thaliana GN=SAUR15 PE=2 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 3.500e-11
Identity = 29/60 (48.33%), Postives = 44/60 (73.33%), Query Frame = 1

		  
Query: 39 PKGCLAIKVGHTNEEQQRFVVPVVYFNHPLFMKLLKEAEEEYGFDQ-KGTITIPCHVEEF 98
          P+G +A+ VG  +++++R+VVPV Y N PLF +LL ++EEE+G+D   G +TIPCH   F
Sbjct: 22 PRGFMAVYVGENDQKKKRYVVPVSYLNQPLFQQLLSKSEEEFGYDHPMGGLTIPCHESLF 81

[Close]

BLAST of Spo01156.1 vs. ExPASy Swiss-Prot
Match: SAU71_ARATH (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana GN=SAUR71 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.300e-10
Identity = 29/63 (46.03%), Postives = 43/63 (68.25%), Query Frame = 1

		  
Query: 38  VPKGCLAIKVGHTNEEQQRFVVPVVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEF 97
           VP+G + + VGH   E +RFVV     NHP+F+ LLK++ +EYG++Q+G + IPCHV  F
Sbjct: 38  VPEGHVPVYVGH---EMERFVVNAELLNHPVFVALLKQSAQEYGYEQQGVLRIPCHVLVF 97

Query: 98  RYV 101
             +
Sbjct: 98  ERI 97

[Close]

BLAST of Spo01156.1 vs. ExPASy Swiss-Prot
Match: ARG7_VIGRR (Indole-3-acetic acid-induced protein ARG7 OS=Vigna radiata var. radiata GN=ARG7 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 3.900e-10
Identity = 31/73 (42.47%), Postives = 46/73 (63.01%), Query Frame = 1

		  
Query: 36  IGVPKGCLAIKVGHTNEEQQRFVVPVVYFNHPLFMKLLKEAEEEYGFDQ-KGTITIPCHV 95
           +  PKG LA+ VG   E  +RFV+PV + N PLF  LL +AEEE+G+D   G +TIPC  
Sbjct: 23  LDAPKGYLAVYVG---ENMKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSE 82

Query: 96  EEFRYVQGLIDQE 108
           + F+++   +  +
Sbjct: 83  DLFQHITSCLSAQ 92

[Close]

BLAST of Spo01156.1 vs. TAIR (Arabidopsis)
Match: AT2G46690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 155.2 bits (391), Expect = 2.800e-38
Identity = 74/98 (75.51%), Postives = 83/98 (84.69%), Query Frame = 1

		  
Query: 38  VPKGCLAIKVGHTNEEQQRFVVPVVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEF 97
           VPKGCLAIKVG   EEQQRF+VPV+YFNHPLFM+LLKEAE+EYGFDQKGTITIPCHVEEF
Sbjct: 24  VPKGCLAIKVGSQGEEQQRFIVPVLYFNHPLFMQLLKEAEDEYGFDQKGTITIPCHVEEF 83

Query: 98  RYVQGLIDQEKSVL---HHHHHHNHHDHHNPIVGCFRA 133
           RYVQ LID E+SV    +HHH H   D ++ +VGCFRA
Sbjct: 84  RYVQALIDGERSVYNGNNHHHRHGGRDQYHHLVGCFRA 121

[Close]

BLAST of Spo01156.1 vs. TAIR (Arabidopsis)
Match: AT4G00880.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 141.0 bits (354), Expect = 5.400e-34
Identity = 69/101 (68.32%), Postives = 80/101 (79.21%), Query Frame = 1

		  
Query: 38  VPKGCLAIKVGHTNEEQQRFVVPVVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEF 97
           VPKGCLA+KVG   EEQ+RFV+PV+YFNHPLF +LLKEAEEE+GF QKGTITIPCHVEEF
Sbjct: 28  VPKGCLAVKVGQ-GEEQERFVIPVMYFNHPLFGQLLKEAEEEFGFAQKGTITIPCHVEEF 87

Query: 98  RYVQGLIDQEKS-------VLHHHHHHNHHDHHNPIVGCFR 132
           RYVQGLID+E +       + HHHHHHNH      ++ CFR
Sbjct: 88  RYVQGLIDRENTRFLGTNLLDHHHHHHNH------LIRCFR 121

[Close]

BLAST of Spo01156.1 vs. TAIR (Arabidopsis)
Match: AT3G61900.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 130.2 bits (326), Expect = 9.500e-31
Identity = 58/73 (79.45%), Postives = 67/73 (91.78%), Query Frame = 1

		  
Query: 38  VPKGCLAIKVGHTNEEQQRFVVPVVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEF 97
           VPKGCLAIKVG   EE+QRFVVPV YFNHPLFM+LL+EAEEEYGF+QKGTITIPCHVE F
Sbjct: 30  VPKGCLAIKVGSKEEEKQRFVVPVFYFNHPLFMQLLREAEEEYGFEQKGTITIPCHVEVF 89

Query: 98  RYVQGLIDQEKSV 111
           RYVQ +I++E+S+
Sbjct: 90  RYVQDMINRERSL 102

[Close]

BLAST of Spo01156.1 vs. TAIR (Arabidopsis)
Match: AT5G53590.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 115.5 bits (288), Expect = 2.400e-26
Identity = 56/97 (57.73%), Postives = 73/97 (75.26%), Query Frame = 1

		  
Query: 38  VPKGCLAIKVGHTNEEQ--QRFVVPVVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVE 97
           VPKGC+AI VGH ++E+   RFVVP+V+ +HPLF+ LLKEAE+EYGF   G ITIPC V+
Sbjct: 46  VPKGCVAIMVGHEDDEEGLHRFVVPLVFLSHPLFLDLLKEAEKEYGFKHDGPITIPCGVD 105

Query: 98  EFRYVQGLIDQEKSVLHHH--HHHNHHDHHNPIVGCF 131
           EF++VQ +ID+E    H H  H HN+H+HHN  + CF
Sbjct: 106 EFKHVQEVIDEETHRRHSHGGHGHNNHNHHNNHLRCF 142

[Close]

BLAST of Spo01156.1 vs. TAIR (Arabidopsis)
Match: AT3G60690.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 85.1 bits (209), Expect = 3.500e-17
Identity = 38/68 (55.88%), Postives = 51/68 (75.00%), Query Frame = 1

		  
Query: 38  VPKGCLAIKVGHTNEEQQRFVVPVVYFNHPLFMKLLKEAEEEYGFDQKGTITIPCHVEEF 97
           VPKG  A+ +G  + + QR +VP+VYFNHPLF +LL+EAEEE+GF Q+G ITIPC   +F
Sbjct: 88  VPKGHSAVYIGKKDGDFQRVLVPIVYFNHPLFGELLREAEEEFGFSQEGGITIPCPYSDF 147

Query: 98  RYVQGLID 106
           + VQ  I+
Sbjct: 148 KRVQTRIE 155

The following BLAST results are available for this feature:

BLAST of Spo01156.1 vs. NCBI nr
BLAST of Spo01156.1 vs. UniProtKB/TrEMBL
BLAST of Spo01156.1 vs. ExPASy Swiss-Prot
BLAST of Spo01156.1 vs. TAIR (Arabidopsis)

BLAST of Spo01156.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902229530\|gb\|KNA21534.1\|	1.4e-71	100.	hypothetical protein SOVF_0422...	[more]
gi\|731311158\|ref\|XP_010692322.1\|	7.0e-52	77.9	PREDICTED: auxin-induced prote...	[more]
gi\|823208982\|ref\|XP_012437801.1\|	4.9e-37	64.0	PREDICTED: auxin-induced prote...	[more]
gi\|729355427\|ref\|XP_010544871.1\|	4.9e-37	64.3	PREDICTED: auxin-induced prote...	[more]
gi\|596005129\|ref\|XP_007218348.1\|	1.1e-36	65.6	hypothetical protein PRUPE_ppa...	[more]

BLAST of Spo01156.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9RRJ6_SPIOL	9.5e-72	100.	Uncharacterized protein OS=Spi...	[more]
A0A0D2SYI3_GOSRA	3.4e-37	64.0	Uncharacterized protein OS=Gos...	[more]
M5X0E8_PRUPE	7.6e-37	65.6	Uncharacterized protein OS=Pru...	[more]
R0FQV0_9BRAS	8.4e-36	76.8	Uncharacterized protein OS=Cap...	[more]
A0A0D2QRQ4_GOSRA	1.6e-34	63.2	Uncharacterized protein OS=Gos...	[more]

BLAST of Spo01156.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
SAU32_ARATH	4.9e-37	75.5	Auxin-responsive protein SAUR3...	[more]
SAU36_ARATH	7.6e-14	56.2	Auxin-responsive protein SAUR3...	[more]
SAU15_ARATH	3.5e-11	48.3	Auxin-responsive protein SAUR1...	[more]
SAU71_ARATH	2.3e-10	46.0	Auxin-responsive protein SAUR7...	[more]
ARG7_VIGRR	3.9e-10	42.4	Indole-3-acetic acid-induced p...	[more]

BLAST of Spo01156.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT2G46690.1	2.8e-38	75.5	SAUR-like auxin-responsive pro...	[more]
AT4G00880.1	5.4e-34	68.3	SAUR-like auxin-responsive pro...	[more]
AT3G61900.1	9.5e-31	79.4	SAUR-like auxin-responsive pro...	[more]
AT5G53590.1	2.4e-26	57.7	SAUR-like auxin-responsive pro...	[more]
AT3G60690.1	3.5e-17	55.8	SAUR-like auxin-responsive pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 37..101 score: 9.6
None	No IPR available	PANTHER	PTHR31374	FAMILY NOT NAMED	coord: 38..131 score: 1.2
None	No IPR available	PANTHER	PTHR31374:SF29	SUBFAMILY NOT NAMED	coord: 38..131 score: 1.2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0009733	response to auxin

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo00194	0.68	Barchart \| Table
Spo18272	0.66	Barchart \| Table
Spo25864	0.66	Barchart \| Table