Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACCTCTCTTTCGTTGTCATGGTCACCTTCTTCATCTCTCTCCTTTCTATCCCTTTCCTCTTCTTCACTCTTTACCGCCGGCATCCAAACACGCTCCCTCCAGGTCAAATGGGTCTCCCCTTCATCGGGGAGACCCTCCAACTGATATCGGCCTTTAAAACTGAAAACCCCGAGCCTTTCACCGATGACCGTGTGAGCCGGTTCGGGTCCATCTTCATGACCCATATATTCGGCGAGCCTACAATCTACAGCGTTGATTCAGAGGTCAATCGTTTTATTCTTAACAATGAAGGCAAGTTGTTTGAGTGTAGTTACCCAAGTATGATATCCAATTTACATGGGAAATACTCACTGCTTATAATGAAAGGAAGTTTGCATAAAAAAATGCACTCTCTTACTGTGAATTTTATTAAATCTGCTCTCACTCGCGGCCAACTTTTGCTTCATATGGATACCTTGATGCGTTCTTATATGGACTCTTGGTCTCCCAAAATTTTGCTCATGGAGGAAACCAAGAAGGCAAGGCAAACTTCTATACATTTATTCACAAGTTTAATCGCATGGATTAGATTTTAAAGTAGTGTATACTAAAGTCAATGTTATTTTTTCTTGTGAATGCAGATTACATTTGCATTAACAGTAAAGCTTTTATTGAGCTCTGACCCTTGTGAATGGACTGAGAGTCTTAGACAAGAGTTTCTTCTTATTGCGGAAGGCTTCTGGAGCATTCCCATACCTTCCATCTCTATCTCTTACAATAGAGCAATCAAAGTATTTCCCAGATTTTCTGCTCCTAATCAATTTTTTGCGCTTAGTCATCAATTGAATTCAAGTCTTTATTCAATGCTTATAAGTTTATCCTTCACCAATTGGATTTCAATCCGATTTATAACATATCAGTCAGTAATTATTACTCTGTATATGGTTCCTAGAGTTTAATGTTTAAATGTCCATTCTTTTTATAGATGAATTTACTTAAAACCCTGATAACTCGGGTGTTACCTACTTACATGTCTAAAATACAGACAGTATAATAAGTTATTTTTGTGGTCTGAAGGCTAAGGAGAAAGTAGTGGAGTCATTGAGCTTAGTGGTAGAGGAGAGGAGAAGGGCAATGGAGGAAGGAGAGAGAAAGAACGACGTATTAGGGGCAATTCTGGACGAGAAGGCCGGCAATGAACATTCCAATGAGATGATAGTGGATTTATTGGTGTCTTTGCTGTTGGCAGGCTATGAGACCACCTCCTCAGCAATGACTCTGTCAGTCAAATTTTTAACCGAGAATCCTCGTGCTCTTTCCGAACTCAAGGTAACTCGGTCTCTCTATTTTTTTCCTCCATTAATTGGTTATGCTATATTATAACGTTATGTTAACTCAAGGCATTTTGCAATATACTTCGTATTGTATTAAGCTGCGAAAGGTATAAGAAAAAACTTGGAAGAAGCTTGTAAAAGGTTGCTTTAGAGAAATAGAGCTATGTTTGAGCATAACAGCACATGTAGCACATCAGAAAAGCAAGCTTGTTCAATCATAATTCAAAGTGAAGCAATGTTAGCTTGTTACACTTCAGCACTATTATGTTTCAATAATGTTAGTAGTAGACTTGCAGGACTCTTTAACGTAGAAAAGAGAACATAAAAATAGGTTAGGCATTTGGATGAACCCAAAATTACTACTCCGTACTATTTTTCAATGTAATATCATCATTGCATTAGATTAACAAGGAAAATGCTATTAGGATTTGCATTAGAAATGACAATGCCTATCATTATCTTCAATAGTCTACACTCAAGCCTATATCGAAGAAGAGTTACCAAATAACAGCGGAGGTGGGGATTTAGCCGAAATGCTAACCTACATCTATTCATCAAAGTTATTGTCTGTCTTATATAGTTATTGTTAATCAATGAGTACAGTACTCTGCTGTTTGATTTGTAGCATGAACTGCAGAGTATTTGAGTTTGACTTTGCAAAAGCTATGCACAAAGACTTTATTTTAATTTTGAACATGTCTTTTTGATGTTTTTGTAGGATGTTAATTAGGCTGTTAGCAATTATTAATATAGTACGTAGTAATTTATATTCATTATACAACAGGAAGAACAAGATAAGATCAGAGCTCAGAAGGGGGATGATAATGAGCCGTTGGTATGGAATGATTACAAATCAATGCCCTTCACTCAGTGTGTAAGTCTTAATTCATAGTATGTCACTATGTTAATGTACTAACTCTTTCCAAACTACTTTAAACTTGCATATTAATCTGTTTTTCTTTATTGATAATAATCTTTTCTTAACTTCCTTAATGCTAGTGTAGGGTTTTCTCACAAACTAACTTCCCCACAAAATTTAAGCTTTTTTTTTACCAATATTATGATCATTGTACCTATGTTTTTGTATTTTCAGGTTATAAGTGAGACTTTGCGAGTTTCTAATATTGTCGGAGGCATATTTAGGCGTACCCTATCTGATGTCCAACTGAACGGTACTTTCTACAAGTTTCCCTGTTATTTGATTCTCATCTTTTAAGTAAAATTTCCAAGATCACTTCTTGTTTGAGATGGTTAATTGCATTGTAAGACACATGATGTTAACAAAACATAAGATTGACTTTCATAATTAAGTTGTTGATTATGGGAGTGACTTTTATTGAAGAAGGGGGTGGTATATTCTGTCTCATTGTATGACAGTAATGACACCATCTCATTGACTCATACCAAGTACAGTAATTTACCCATGTTTTAGGTAATTAAGTTTCTTAAATCATACGGAGTAATAGTTAAGCTACATATTGCTGGATTAATATACATGTTAACAGGCTATACAATACCAAAGGGATGGAAAATATTTGCAGCACTTAGGGGGCCACATATGAATGATGAATACTTTAAGGATGCTCGAACGTTCAATCCTTGGAGATGGCAGGTTCGAATATCCTATGTCCTAAAATTAACATCTATATCTTCTCCTATTCCTATTTGTGGTTAAATTTTGATTTTTTGGTCACCTTCTGTATGTAATGAACAGAGTGATGCAGAAAAGACCCCCGCTAATGTTTTTATTCCATTTGGGGGAGGCCCAAGGTTGTGCCCTGGCTATGAGCTTTCTAGGGTATCGATATCTGTCTTCCTTCACCACCTCGTTACAAATTATAGGTAATGACTAATGACGTTGTGGTTCTTGTCAACTTATTCGGCATTGGCATACATTTTAAGTAAAATTCAGTCTTGATATGTGTTGCATAGTTGCATGGTGTTAACCTATACTGTATGTTTTCTCAACAGTTGGGAGCCTGCAGAGAAGGATAAGGTAGTCTTTTTTCCCTTCACTGGAACTCAGAAGCGGTACCCTATCTATGTGAAGAGGAACTGAGGAATGCAAAGGAGACCTGTATATAAGCATATAGATATAGCCAGTAAAAAGACGACAATCAACTTTTGGTTGAGAAAATAAGCTGTGTATGGAATTGATCTGCGACTCATAATCTTGTTTCCTTTTATAGGCTTCTTAACTTGCCATACAACTTGCAAGACAATGTATTTGTAACATGTATATGAAATATTCCCTCAACATCAAAATCCTAAATTGTAAAAAGAACTGCACGTGCTGGAGACTCAGAGATCAATCGTTCTCGAACAAGAGAACTATCAGAGTAACATTTTTTTTTTTTTTTTGACTGGGAAGAACAATTTCATTAATAATCAGCCATACGGCATCTACAATAATAAAATAGATCTGTATACCACAGATTCAAAGAAAATACATAACTGTTACAATCAAAACAATTACTATTCTGCATCCTAAAGCACATCTCGTACTCCACCGCTTCTAGCTTAACGCGAGCAGTGATTTTCGATGTTTTCGCATCTTGCCAAGTAGAGCCCTTCGCAATATGCGCACGAATTGTTCTAATTGACGAGTTGATGATAAACCCTAAACCTGTATGAATCCAAATCTCCTTCCCAATTATTGAAACCCTAAAAACCCTAAAAAAATTCTCATCCATGGATGAGAATCAAGAACCTAGAAAACTCTAGGAAAAACCCAAATAAATTGGGAACAACCCAAGAATAATTGGGAACAAAACAACGGAAAAAACAAAACAAGACAATACATAAAGAGAAAACAATGAAAAAAACAAGAATAAGGGTCGGAAATAGTCTAATTTCCGAAGAAATTAGACTATTTCTGGCCTAAACGGCAAAGAAAACTGAAACCCTAAAAGATGAGAGAGAAGAGAGAAAAGGGGGAGAGAGGAGCGAAGCATTATGGTTAATTACTATCAGAGTAACTTGAACGAGCTTATCTGTAACAATGTCGTGGTGCGACACCAATCAC ATGGACCTCTCTTTCGTTGTCATGGTCACCTTCTTCATCTCTCTCCTTTCTATCCCTTTCCTCTTCTTCACTCTTTACCGCCGGCATCCAAACACGCTCCCTCCAGGTCAAATGGGTCTCCCCTTCATCGGGGAGACCCTCCAACTGATATCGGCCTTTAAAACTGAAAACCCCGAGCCTTTCACCGATGACCGTGTGAGCCGGTTCGGGTCCATCTTCATGACCCATATATTCGGCGAGCCTACAATCTACAGCGTTGATTCAGAGATTACATTTGCATTAACAGTAAAGCTTTTATTGAGCTCTGACCCTTGTGAATGGACTGAGAGTCTTAGACAAGAGTTTCTTCTTATTGCGGAAGGCTTCTGGAGCATTCCCATACCTTCCATCTCTATCTCTTACAATAGAGCAATCAAAGCTAAGGAGAAAGTAGTGGAGTCATTGAGCTTAGTGGTAGAGGAGAGGAGAAGGGCAATGGAGGAAGGAGAGAGAAAGAACGACGTATTAGGGGCAATTCTGGACGAGAAGGCCGGCAATGAACATTCCAATGAGATGATAGTGGATTTATTGGTGTCTTTGCTGTTGGCAGGCTATGAGACCACCTCCTCAGCAATGACTCTGTCAGTCAAATTTTTAACCGAGAATCCTCGTGCTCTTTCCGAACTCAAGGAAGAACAAGATAAGATCAGAGCTCAGAAGGGGGATGATAATGAGCCGTTGGTATGGAATGATTACAAATCAATGCCCTTCACTCAGTGTGTTATAAGTGAGACTTTGCGAGTTTCTAATATTGTCGGAGGCATATTTAGGCGTACCCTATCTGATGTCCAACTGAACGGCTATACAATACCAAAGGGATGGAAAATATTTGCAGCACTTAGGGGGCCACATATGAATGATGAATACTTTAAGGATGCTCGAACGTTCAATCCTTGGAGATGGCAGAGTGATGCAGAAAAGACCCCCGCTAATGTTTTTATTCCATTTGGGGGAGGCCCAAGGTTGTGCCCTGGCTATGAGCTTTCTAGGGTATCGATATCTGTCTTCCTTCACCACCTCGTTACAAATTATAGTTGGGAGCCTGCAGAGAAGGATAAGGTAGTCTTTTTTCCCTTCACTGGAACTCAGAAGCGGTACCCTATCTATGTGAAGAGGAACTGAGGAATGCAAAGGAGACCTGTATATAAGCATATAGATATAGCCAGTAAAAAGACGACAATCAACTTTTGGTTGAGAAAATAAGCTGTGTATGGAATTGATCTGCGACTCATAATCTTGTTTCCTTTTATAGGCTTCTTAACTTGCCATACAACTTGCAAGACAATGTATTTGTAACATGTATATGAAATATTCCCTCAACATCAAAATCCTAAATTGTAAAAAGAACTGCACGTGCTGGAGACTCAGAGATCAATCGTTCTCGAACAAGAGAACTATCAGAGTAACTTGAACGAGCTTATCTGTAACAATGTCGTGGTGCGACACCAATCAC ATGGACCTCTCTTTCGTTGTCATGGTCACCTTCTTCATCTCTCTCCTTTCTATCCCTTTCCTCTTCTTCACTCTTTACCGCCGGCATCCAAACACGCTCCCTCCAGGTCAAATGGGTCTCCCCTTCATCGGGGAGACCCTCCAACTGATATCGGCCTTTAAAACTGAAAACCCCGAGCCTTTCACCGATGACCGTGTGAGCCGGTTCGGGTCCATCTTCATGACCCATATATTCGGCGAGCCTACAATCTACAGCGTTGATTCAGAGATTACATTTGCATTAACAGTAAAGCTTTTATTGAGCTCTGACCCTTGTGAATGGACTGAGAGTCTTAGACAAGAGTTTCTTCTTATTGCGGAAGGCTTCTGGAGCATTCCCATACCTTCCATCTCTATCTCTTACAATAGAGCAATCAAAGCTAAGGAGAAAGTAGTGGAGTCATTGAGCTTAGTGGTAGAGGAGAGGAGAAGGGCAATGGAGGAAGGAGAGAGAAAGAACGACGTATTAGGGGCAATTCTGGACGAGAAGGCCGGCAATGAACATTCCAATGAGATGATAGTGGATTTATTGGTGTCTTTGCTGTTGGCAGGCTATGAGACCACCTCCTCAGCAATGACTCTGTCAGTCAAATTTTTAACCGAGAATCCTCGTGCTCTTTCCGAACTCAAGGAAGAACAAGATAAGATCAGAGCTCAGAAGGGGGATGATAATGAGCCGTTGGTATGGAATGATTACAAATCAATGCCCTTCACTCAGTGTGTTATAAGTGAGACTTTGCGAGTTTCTAATATTGTCGGAGGCATATTTAGGCGTACCCTATCTGATGTCCAACTGAACGGCTATACAATACCAAAGGGATGGAAAATATTTGCAGCACTTAGGGGGCCACATATGAATGATGAATACTTTAAGGATGCTCGAACGTTCAATCCTTGGAGATGGCAGAGTGATGCAGAAAAGACCCCCGCTAATGTTTTTATTCCATTTGGGGGAGGCCCAAGGTTGTGCCCTGGCTATGAGCTTTCTAGGGTATCGATATCTGTCTTCCTTCACCACCTCGTTACAAATTATAGTTGGGAGCCTGCAGAGAAGGATAAGGTAGTCTTTTTTCCCTTCACTGGAACTCAGAAGCGGTACCCTATCTATGTGAAGAGGAACTGA MDLSFVVMVTFFISLLSIPFLFFTLYRRHPNTLPPGQMGLPFIGETLQLISAFKTENPEPFTDDRVSRFGSIFMTHIFGEPTIYSVDSEITFALTVKLLLSSDPCEWTESLRQEFLLIAEGFWSIPIPSISISYNRAIKAKEKVVESLSLVVEERRRAMEEGERKNDVLGAILDEKAGNEHSNEMIVDLLVSLLLAGYETTSSAMTLSVKFLTENPRALSELKEEQDKIRAQKGDDNEPLVWNDYKSMPFTQCVISETLRVSNIVGGIFRRTLSDVQLNGYTIPKGWKIFAALRGPHMNDEYFKDARTFNPWRWQSDAEKTPANVFIPFGGGPRLCPGYELSRVSISVFLHHLVTNYSWEPAEKDKVVFFPFTGTQKRYPIYVKRN Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo01076.1 vs. NCBI nr
Match: gi|902157236|gb|KNA06106.1| (hypothetical protein SOVF_184200 [Spinacia oleracea]) HSP 1 Score: 602.4 bits (1552), Expect = 5.400e-169 Identity = 297/298 (99.66%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Spo01076.1 vs. NCBI nr
Match: gi|731315070|ref|XP_010689797.1| (PREDICTED: cytochrome P450 90A1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 471.5 bits (1212), Expect = 1.400e-129 Identity = 224/297 (75.42%), Postives = 262/297 (88.22%), Query Frame = 1
BLAST of Spo01076.1 vs. NCBI nr
Match: gi|902167126|gb|KNA07330.1| (hypothetical protein SOVF_172890 [Spinacia oleracea]) HSP 1 Score: 443.7 bits (1140), Expect = 3.200e-121 Identity = 216/299 (72.24%), Postives = 256/299 (85.62%), Query Frame = 1
BLAST of Spo01076.1 vs. NCBI nr
Match: gi|702473065|ref|XP_010031233.1| (PREDICTED: cytochrome P450 90A1 [Eucalyptus grandis]) HSP 1 Score: 421.0 bits (1081), Expect = 2.200e-114 Identity = 200/299 (66.89%), Postives = 249/299 (83.28%), Query Frame = 1
BLAST of Spo01076.1 vs. NCBI nr
Match: gi|763807345|gb|KJB74283.1| (hypothetical protein B456_011G286100 [Gossypium raimondii]) HSP 1 Score: 413.7 bits (1062), Expect = 3.600e-112 Identity = 217/420 (51.67%), Postives = 288/420 (68.57%), Query Frame = 1
BLAST of Spo01076.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QHQ8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_184200 PE=3 SV=1) HSP 1 Score: 602.4 bits (1552), Expect = 3.800e-169 Identity = 297/298 (99.66%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Spo01076.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJ88_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_172890 PE=3 SV=1) HSP 1 Score: 443.7 bits (1140), Expect = 2.200e-121 Identity = 216/299 (72.24%), Postives = 256/299 (85.62%), Query Frame = 1
BLAST of Spo01076.1 vs. UniProtKB/TrEMBL
Match: A0A059AAW0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J00224 PE=3 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 1.600e-114 Identity = 200/299 (66.89%), Postives = 249/299 (83.28%), Query Frame = 1
BLAST of Spo01076.1 vs. UniProtKB/TrEMBL
Match: A0A0D2TEV6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G286100 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 2.500e-112 Identity = 217/420 (51.67%), Postives = 288/420 (68.57%), Query Frame = 1
BLAST of Spo01076.1 vs. UniProtKB/TrEMBL
Match: B9HHN3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s06740g PE=3 SV=1) HSP 1 Score: 409.8 bits (1052), Expect = 3.600e-111 Identity = 193/296 (65.20%), Postives = 246/296 (83.11%), Query Frame = 1
BLAST of Spo01076.1 vs. ExPASy Swiss-Prot
Match: C90A1_ARATH (Cytochrome P450 90A1 OS=Arabidopsis thaliana GN=CYP90A1 PE=2 SV=1) HSP 1 Score: 392.9 bits (1008), Expect = 4.100e-108 Identity = 191/299 (63.88%), Postives = 245/299 (81.94%), Query Frame = 1
BLAST of Spo01076.1 vs. ExPASy Swiss-Prot
Match: C90C1_ARATH (3-epi-6-deoxocathasterone 23-monooxygenase OS=Arabidopsis thaliana GN=ROT3 PE=2 SV=3) HSP 1 Score: 240.0 bits (611), Expect = 4.400e-62 Identity = 136/345 (39.42%), Postives = 209/345 (60.58%), Query Frame = 1
BLAST of Spo01076.1 vs. ExPASy Swiss-Prot
Match: C72B2_PINTA (Cytochrome P450 720B2 OS=Pinus taeda GN=CYP720B2 PE=2 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.700e-59 Identity = 120/301 (39.87%), Postives = 182/301 (60.47%), Query Frame = 1
BLAST of Spo01076.1 vs. ExPASy Swiss-Prot
Match: C90D1_ARATH (3-epi-6-deoxocathasterone 23-monooxygenase OS=Arabidopsis thaliana GN=CYP90D1 PE=2 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 2.700e-59 Identity = 116/306 (37.91%), Postives = 188/306 (61.44%), Query Frame = 1
BLAST of Spo01076.1 vs. ExPASy Swiss-Prot
Match: C90B1_ARATH (Cytochrome P450 90B1 OS=Arabidopsis thaliana GN=CYP90B1 PE=1 SV=2) HSP 1 Score: 223.8 bits (569), Expect = 3.300e-57 Identity = 129/357 (36.13%), Postives = 203/357 (56.86%), Query Frame = 1
BLAST of Spo01076.1 vs. TAIR (Arabidopsis)
Match: AT5G05690.1 (Cytochrome P450 superfamily protein) HSP 1 Score: 392.9 bits (1008), Expect = 2.300e-109 Identity = 191/299 (63.88%), Postives = 245/299 (81.94%), Query Frame = 1
BLAST of Spo01076.1 vs. TAIR (Arabidopsis)
Match: AT4G36380.1 (Cytochrome P450 superfamily protein) HSP 1 Score: 240.0 bits (611), Expect = 2.500e-63 Identity = 136/345 (39.42%), Postives = 209/345 (60.58%), Query Frame = 1
BLAST of Spo01076.1 vs. TAIR (Arabidopsis)
Match: AT3G13730.1 (cytochrome P450, family 90, subfamily D, polypeptide 1) HSP 1 Score: 230.7 bits (587), Expect = 1.500e-60 Identity = 116/306 (37.91%), Postives = 188/306 (61.44%), Query Frame = 1
BLAST of Spo01076.1 vs. TAIR (Arabidopsis)
Match: AT3G50660.1 (Cytochrome P450 superfamily protein) HSP 1 Score: 223.8 bits (569), Expect = 1.800e-58 Identity = 129/357 (36.13%), Postives = 203/357 (56.86%), Query Frame = 1
BLAST of Spo01076.1 vs. TAIR (Arabidopsis)
Match: AT1G12740.2 (cytochrome P450, family 87, subfamily A, polypeptide 2) HSP 1 Score: 201.8 bits (512), Expect = 7.500e-52 Identity = 105/288 (36.46%), Postives = 163/288 (56.60%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo01076.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo01076.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo01076.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo01076.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
|