Spo04381 (gene) | SpinachBase

Overview


Name	Spo04381
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	40S ribosomal protein S10, putative
Location	chr3 : 2663260 .. 2666732 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAACCTATTTATCGTAATAATACAACAAAGTTGTTTTAAGTTAAATTTGATATCTTTTTGCACAACTCAAAATTGATTCGAAATCAAACTTGAATCTGACCCGGATTCCCACACCTACTCCAAACAAAAATAACAAAAAGGAAAAAGGATTTTTTGGAAAAAAAAGCCCGAAAAACAAAGAGAAACCAAAAGCCCAGCCCAAACCTAACAAAGCCCCAAATTTTCACATAATAAAAAGGCAACCAAATTAGGGTTTTGGGAGATCCTTTTACAACTTCTTGTAGCTGCTGCTTGAGTCTCTTCACGCCTCTGCAGTTTGCATCATCTCTCTCCTCCAATCTCAAGAGCAGCCATGGTTCGTCTTCATCCTCCCTCACTCAACCTTCTGTAATTCCCGTCGTATAATTTTAATCGTTTTCTTTCTGTTTTATTTAATGTAGATTATCTCAGAGAAGAATCGCAAGGAGATTTCCAAGTACCTCTTCCAAGGTTCGTTTCTATCTCCTAATCTCAATATCAAATCTGTTTATATGTGTATTTGAATTTTTTCTGCTTTGTTTTGCTGGTTTTTCTGTATGATTATTTTATGTTTTTATGAATCCTCCTTGTTTCAATTGCGCCGTGAAAGTTGTTGGTTTTTTGTGAAATATACGCAAGAACTGTGCATATTATTTGTTGATTGGATATTGTTTATGTGTTGTAGTTAGAAATTAATACACTTTGGTTTGATTTTGTATGAATTCAATTTTCTTAATTATTTTACAATTTCCAATTTATAATTTTGTACTCTTGGTTAAAATTGTGCAAATAATTGATTTGGTTTTGTGTATTTGGAAAACTTTAAGCTAATTTAAGCACCCCAAATTGTTTTCTACCATTGTTTGAGAGAATACGATTTTCTGTTGGAGTGAAAATCGAATGTTGGAGTGACGATTTCTGTTACGCATTCTATTTTTGTAGTTCCACAAGATAATGCTCTATTTTGATAAAATTTACAACTTGTTTATACTGGAGGAGTAAAAATTATAATCTGATTCTTAAAAGTCACCTCTGATAAAGGGTACTGTAGTAGAATCTGTAGTATTCAGTAGCGTGGGGAATAAGTATGTTATGCGTCCTATTAGATTCTGAATTAGTGCAACTGAGACGTGGTGTGGTACATGTCTGACTTCCTCAAGATCATACTCCATTTTATAAAGCTACTATGTTACAACATACAACTTGTGCATACTGAAGAAGTAATACTGATAATCTGATTCTTAAAAGTGACCTTTGGTAGAGGGTATTGTAGTCTTTAGGAACGATGGATGTAAGTGTGTTCATGTGTTCTGTTTGATTCTGAATGAGTGCAACTGGTATTGTAGTATTTAGGAACGAGGGCTGTAAGTGTGTTTATGTTTTCTGTTTGATTCTAAATAAGTGTAACTGTGACGTGGTGTGGTACGTGTCTTAATTGAGCAATATTTGTGAATGCAGAGGGTGTGTGCTATGCTAAGAAGGACTACAACCTTGCAAAGCATCCCGACATCGATGTCCCAAATCTGCAAGTAATTAAGCTCATGCAGAGCTTTAAGTCAAAGGAGTATGTCCGTGAGACCTTTGCCTGGATGCACTACTACTGGTACTTGACCAACGATGGTATTGAGTTCTTGAGGACTTACCTCAACCTCCCTTCCGAAATTGTCCCTGCTACCCTTAAGAAGCAGATGAAGCCTGCTGGTCGTCCCATGGGTCCCGGTGGTGATCGCCCACGGTATATTTTTACTTGTTGCTTATGTGTGTTGTGCCTTCTAGCTAACTGATTTCATTTTTTTGTGTGATTATTTGCATGTTAAATTGTTTATTTTGTCTGTTTACAGTGGCCCACCCAGGTTTGAGGGTGACCGACCAAGGTTTGGTGACCGTGAGGGTTACCGTTCAGGACCTCGTGGACCACCAGGGGAATTCGGTGGTGAGAAGGGTGGAGCTCCAGCTGATTACCAGCCTTCATTCGGTGTAAGTTCTTTGATACACATGGTTAATTGTACTCTTAAAGTCCTGCGTGTTTCAGATGGATATTGAACTTTTTAGTTTCGTTCTCTGATTTTGTATGAAAAATACCCCCAAGGTGTTATTACTGAAAATGCTGTGTTTTTTTTTGCTCCAAGTTCAAGTGATTGTAGGAATTTGTGGTTACGTTCCCTTGATGTTATCTTTGTAATTCAATTTTGTTGTGATCACGATGAGGAATATATTAGCCAAGACATAGCTTATGTGTTGGTGTATGAAATATTGCTTCTTGAATCCTCCCCTTTTCCAGCAATCGGAAGTACATAAAATAGTGTGAGAAATCTAAACAAATAGACAGAAGAGTGGAATAAGGTGAAGCGAATCATGTCTATTAGCAGAATTGGTAGACTGCAGGAAAATTAGTTGTTCTTAATGCAATTTCTTTATAATTTTATGACTTTTATTGTTAGGACTTCCTAGTTTCTAATCGCATTAGAAACTGTAGCTGCAGTTTGTAGGAATGCTCTTTCAATTGTTACTTCCCTATTTATTTTGCCCACTGTATTTATTTTGCAGAATCGGTAGACTTCAGTGAAATGAGTAGTTTCTTAATATGATTTCTTTATACTCCCTCTGTCCCTTAATACTCGACCTGTTTTGACCGAATACGCTTGCCAATGCACAACTTTGACCACCGATTTCTTTAACTATATATTATAAAAACTTATAAAAATATTAATATTTTGAAAATACATATTAAGATGAAGCCAACAATATATTATATACTAACATGTGTTTTCATATACTAGAAATAAAATAGGGTCAAAGTGAATTATGTGAATAACGTAAAAAGTCAAAACAGGTCGAGTATTAAGGGACGGAGGGAGTAATGGTTATGATTTTTTATTTGGAGTAGTGTTCCTTGATTGGAGATTTTTGTTTCTTTTTTTGTCCAATTTGTTTACCCACTTTGTTTATTTTGTACATTGATGAAGTTGTTCCCGAATATTCAGGGTGCAAGGAGGCCAGGATTTGGCCGTGGTGCTGGAGGATTCGGTGGTGGTGCACCCGGTGCTGCCCCAGGAGCTGCACCCGGAGCTGGTGCTTCAGGATCTTTTGCTTAGGTACAAGGCAGTGCTTATTATGTGAGGCGAAACCAGGTTGAATTGTGTTAGTGGTTTCTTTATTAGGCTAAAAAGAGTACAATTTCAAGTGTTTTCTAGAAGGCGTGACATTTATTTTGTAATCTGGCCTCTTGGGCTTTATTTTCAGTGTAACTACAAGAGCTAGTAGTAATTTTGACTATTGGCATTTGTTTTTTGAAATACCCCCAAACGCATCTTCCTACTTAAATGTGACTCGATTTGTTCTTCAACTAGATAACTGTTTTAATGTCTTCTGATGCAACATCATCATAGTCGGCAGTTGATAATTTGATATCGAACTATTCATTCAATTCAAAACCAATAATTTTTTTCTGTGG

mRNA sequence

TTAACCTATTTATCGTAATAATACAACAAAGTTGTTTTAAGTTAAATTTGATATCTTTTTGCACAACTCAAAATTGATTCGAAATCAAACTTGAATCTGACCCGGATTCCCACACCTACTCCAAACAAAAATAACAAAAAGGAAAAAGGATTTTTTGGAAAAAAAAGCCCGAAAAACAAAGAGAAACCAAAAGCCCAGCCCAAACCTAACAAAGCCCCAAATTTTCACATAATAAAAAGGCAACCAAATTAGGGTTTTGGGAGATCCTTTTACAACTTCTTGTAGCTGCTGCTTGAGTCTCTTCACGCCTCTGCAGTTTGCATCATCTCTCTCCTCCAATCTCAAGAGCAGCCATGATTATCTCAGAGAAGAATCGCAAGGAGATTTCCAAGTACCTCTTCCAAGAGGGTGTGTGCTATGCTAAGAAGGACTACAACCTTGCAAAGCATCCCGACATCGATGTCCCAAATCTGCAAGTAATTAAGCTCATGCAGAGCTTTAAGTCAAAGGAGTATGTCCGTGAGACCTTTGCCTGGATGCACTACTACTGGTACTTGACCAACGATGGTATTGAGTTCTTGAGGACTTACCTCAACCTCCCTTCCGAAATTGTCCCTGCTACCCTTAAGAAGCAGATGAAGCCTGCTGGTCGTCCCATGGGTCCCGGTGGTGATCGCCCACGTGGCCCACCCAGGTTTGAGGGTGACCGACCAAGGTTTGGTGACCGTGAGGGTTACCGTTCAGGACCTCGTGGACCACCAGGGGAATTCGGTGGTGAGAAGGGTGGAGCTCCAGCTGATTACCAGCCTTCATTCGGTGGTGCAAGGAGGCCAGGATTTGGCCGTGGTGCTGGAGGATTCGGTGGTGGTGCACCCGGTGCTGCCCCAGGAGCTGCACCCGGAGCTGGTGCTTCAGGATCTTTTGCTTAGGTACAAGGCAGTGCTTATTATGTGAGGCGAAACCAGGTTGAATTGTGTTAGTGGTTTCTTTATTAGGCTAAAAAGAGTACAATTTCAAGTGTTTTCTAGAAGGCGTGACATTTATTTTGTAATCTGGCCTCTTGGGCTTTATTTTCAGTGTAACTACAAGAGCTAGTAGTAATTTTGACTATTGGCATTTGTTTTTTGAAATACCCCCAAACGCATCTTCCTACTTAAATGTGACTCGATTTGTTCTTCAACTAGATAACTGTTTTAATGTCTTCTGATGCAACATCATCATAGTCGGCAGTTGATAATTTGATATCGAACTATTCATTCAATTCAAAACCAATAATTTTTTTCTGTGG

Coding sequence (CDS)

ATGATTATCTCAGAGAAGAATCGCAAGGAGATTTCCAAGTACCTCTTCCAAGAGGGTGTGTGCTATGCTAAGAAGGACTACAACCTTGCAAAGCATCCCGACATCGATGTCCCAAATCTGCAAGTAATTAAGCTCATGCAGAGCTTTAAGTCAAAGGAGTATGTCCGTGAGACCTTTGCCTGGATGCACTACTACTGGTACTTGACCAACGATGGTATTGAGTTCTTGAGGACTTACCTCAACCTCCCTTCCGAAATTGTCCCTGCTACCCTTAAGAAGCAGATGAAGCCTGCTGGTCGTCCCATGGGTCCCGGTGGTGATCGCCCACGTGGCCCACCCAGGTTTGAGGGTGACCGACCAAGGTTTGGTGACCGTGAGGGTTACCGTTCAGGACCTCGTGGACCACCAGGGGAATTCGGTGGTGAGAAGGGTGGAGCTCCAGCTGATTACCAGCCTTCATTCGGTGGTGCAAGGAGGCCAGGATTTGGCCGTGGTGCTGGAGGATTCGGTGGTGGTGCACCCGGTGCTGCCCCAGGAGCTGCACCCGGAGCTGGTGCTTCAGGATCTTTTGCTTAG

Protein sequence

MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFAWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPMGPGGDRPRGPPRFEGDRPRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSFGGARRPGFGRGAGGFGGGAPGAAPGAAPGAGASGSFA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo04381.1	Spo04381.1	mRNA

Homology

[Close]

BLAST of Spo04381.1 vs. NCBI nr
Match: gi|902217602|gb|KNA17791.1| (hypothetical protein SOVF_076880 [Spinacia oleracea])

HSP 1 Score: 375.6 bits (963), Expect = 5.300e-101
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPMGPGGDRPRGPPRFEGDRP 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPMGPGGDRPRGPPRFEGDRP
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPMGPGGDRPRGPPRFEGDRP 120

Query: 121 RFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSFGGARRPGFGRGAGGFGGGAPGAAPGA 180
           RFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSFGGARRPGFGRGAGGFGGGAPGAAPGA
Sbjct: 121 RFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSFGGARRPGFGRGAGGFGGGAPGAAPGA 180

Query: 181 APGAGASGSFA 192
           APGAGASGSFA
Sbjct: 181 APGAGASGSFA 191

[Close]

BLAST of Spo04381.1 vs. NCBI nr
Match: gi|731321949|ref|XP_010671623.1| (PREDICTED: 40S ribosomal protein S10-1-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 330.1 bits (845), Expect = 2.600e-87
Identity = 175/192 (91.15%), Postives = 178/192 (92.71%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNRKEI KYLFQEGVCYAKKD+NLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIIPDKNRKEICKYLFQEGVCYAKKDFNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPMGPGGDRPRGPPRFEGDRP 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQ KPAGR MGP GDRPRGPPRF+GDRP
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQTKPAGRSMGPPGDRPRGPPRFDGDRP 120

Query: 121 RFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF-GGARRPGFGRGAGGFGGGAPGAAPG 180
           RFGDREGYRSGPRGP GEFGGEKGGAPADYQPSF  G RRPGFGRGAGGFGGGAPG APG
Sbjct: 121 RFGDREGYRSGPRGPAGEFGGEKGGAPADYQPSFSAGGRRPGFGRGAGGFGGGAPG-APG 180

Query: 181 AAPGAGASGSFA 192
           A    GASGSFA
Sbjct: 181 A---PGASGSFA 188

[Close]

BLAST of Spo04381.1 vs. NCBI nr
Match: gi|460368763|ref|XP_004230234.1| (PREDICTED: 40S ribosomal protein S10-like [Solanum lycopersicum])

HSP 1 Score: 317.4 bits (812), Expect = 1.700e-83
Identity = 161/176 (91.48%), Postives = 166/176 (94.32%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNR+EISKYLFQEGVCYAKKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPM-GPGGDRPRGPPRFEGDR 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKK  KP GRPM GP GDRPRGPPRFEGDR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDR 120

Query: 121 PRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF-GGARRPGFGRGAGGFGGGAP 175
           PRFGDR+GYR+GPRGPPGEFGGEKGGAPADYQP+F G   RPGFGRG+GGFGGGAP
Sbjct: 121 PRFGDRDGYRAGPRGPPGEFGGEKGGAPADYQPAFRGSGGRPGFGRGSGGFGGGAP 176

[Close]

BLAST of Spo04381.1 vs. NCBI nr
Match: gi|568214461|ref|NP_001275161.1| (40S ribosomal protein S10-like [Solanum tuberosum])

HSP 1 Score: 316.2 bits (809), Expect = 3.800e-83
Identity = 160/176 (90.91%), Postives = 166/176 (94.32%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNR+EISKYLFQEGVCYAKKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPM-GPGGDRPRGPPRFEGDR 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKK  KP GRPM GP GDRPRGPPRFEGDR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDR 120

Query: 121 PRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF-GGARRPGFGRGAGGFGGGAP 175
           PR+GDR+GYR+GPRGPPGEFGGEKGGAPADYQP+F G   RPGFGRG+GGFGGGAP
Sbjct: 121 PRYGDRDGYRAGPRGPPGEFGGEKGGAPADYQPAFRGSGGRPGFGRGSGGFGGGAP 176

[Close]

BLAST of Spo04381.1 vs. NCBI nr
Match: gi|970003254|ref|XP_015062402.1| (PREDICTED: 40S ribosomal protein S10-1-like [Solanum pennellii])

HSP 1 Score: 316.2 bits (809), Expect = 3.800e-83
Identity = 160/176 (90.91%), Postives = 166/176 (94.32%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNR+EISKYLFQEGVCYAKKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPM-GPGGDRPRGPPRFEGDR 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKK  KP GRPM GP GDRPRGPPRFEGDR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDR 120

Query: 121 PRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF-GGARRPGFGRGAGGFGGGAP 175
           PR+GDR+GYR+GPRGPPGEFGGEKGGAPADYQP+F G   RPGFGRG+GGFGGGAP
Sbjct: 121 PRYGDRDGYRAGPRGPPGEFGGEKGGAPADYQPAFRGSGGRPGFGRGSGGFGGGAP 176

[Close]

BLAST of Spo04381.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RE56_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_076880 PE=4 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 3.700e-101
Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPMGPGGDRPRGPPRFEGDRP 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPMGPGGDRPRGPPRFEGDRP
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPMGPGGDRPRGPPRFEGDRP 120

Query: 121 RFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSFGGARRPGFGRGAGGFGGGAPGAAPGA 180
           RFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSFGGARRPGFGRGAGGFGGGAPGAAPGA
Sbjct: 121 RFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSFGGARRPGFGRGAGGFGGGAPGAAPGA 180

Query: 181 APGAGASGSFA 192
           APGAGASGSFA
Sbjct: 181 APGAGASGSFA 191

[Close]

BLAST of Spo04381.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CVQ7_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g053340 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.800e-87
Identity = 175/192 (91.15%), Postives = 178/192 (92.71%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNRKEI KYLFQEGVCYAKKD+NLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIIPDKNRKEICKYLFQEGVCYAKKDFNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPMGPGGDRPRGPPRFEGDRP 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQ KPAGR MGP GDRPRGPPRF+GDRP
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQTKPAGRSMGPPGDRPRGPPRFDGDRP 120

Query: 121 RFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF-GGARRPGFGRGAGGFGGGAPGAAPG 180
           RFGDREGYRSGPRGP GEFGGEKGGAPADYQPSF  G RRPGFGRGAGGFGGGAPG APG
Sbjct: 121 RFGDREGYRSGPRGPAGEFGGEKGGAPADYQPSFSAGGRRPGFGRGAGGFGGGAPG-APG 180

Query: 181 AAPGAGASGSFA 192
           A    GASGSFA
Sbjct: 181 A---PGASGSFA 188

[Close]

BLAST of Spo04381.1 vs. UniProtKB/TrEMBL
Match: K4B101_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.200e-83
Identity = 161/176 (91.48%), Postives = 166/176 (94.32%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNR+EISKYLFQEGVCYAKKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPM-GPGGDRPRGPPRFEGDR 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKK  KP GRPM GP GDRPRGPPRFEGDR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDR 120

Query: 121 PRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF-GGARRPGFGRGAGGFGGGAP 175
           PRFGDR+GYR+GPRGPPGEFGGEKGGAPADYQP+F G   RPGFGRG+GGFGGGAP
Sbjct: 121 PRFGDRDGYRAGPRGPPGEFGGEKGGAPADYQPAFRGSGGRPGFGRGSGGFGGGAP 176

[Close]

BLAST of Spo04381.1 vs. UniProtKB/TrEMBL
Match: Q2XTB2_SOLTU (40S ribosomal protein S10-like OS=Solanum tuberosum GN=PGSC0003DMG400024757 PE=2 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 2.700e-83
Identity = 160/176 (90.91%), Postives = 166/176 (94.32%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNR+EISKYLFQEGVCYAKKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCYAKKDYNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPM-GPGGDRPRGPPRFEGDR 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKK  KP GRPM GP GDRPRGPPRFEGDR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDR 120

Query: 121 PRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF-GGARRPGFGRGAGGFGGGAP 175
           PR+GDR+GYR+GPRGPPGEFGGEKGGAPADYQP+F G   RPGFGRG+GGFGGGAP
Sbjct: 121 PRYGDRDGYRAGPRGPPGEFGGEKGGAPADYQPAFRGSGGRPGFGRGSGGFGGGAP 176

[Close]

BLAST of Spo04381.1 vs. UniProtKB/TrEMBL
Match: A0A0V0HBJ7_SOLCH (Putative ovule protein OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 3.500e-83
Identity = 160/179 (89.39%), Postives = 168/179 (93.85%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISEKNR+EISKYLFQEGVC+AKKDYNLAKHP+IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEKNRREISKYLFQEGVCFAKKDYNLAKHPNIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPM-GPGGDRPRGPPRFEGDR 120
           WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKK  KP GRPM GP GDRPRGPPRFEGDR
Sbjct: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKSAKPLGRPMGGPPGDRPRGPPRFEGDR 120

Query: 121 PRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF-GGARRPGFGRGAGGFGGGAPGAA 178
           PRFGDR+GYR+GPRGPPGEFGGEKGGAPADYQP+F GG  RPGFGRGAGGFGG  P ++
Sbjct: 121 PRFGDRDGYRAGPRGPPGEFGGEKGGAPADYQPAFRGGGGRPGFGRGAGGFGGAPPSSS 179

[Close]

BLAST of Spo04381.1 vs. ExPASy Swiss-Prot
Match: RS10A_ORYSJ (40S ribosomal protein S10-1 OS=Oryza sativa subsp. japonica GN=RPS10-1 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 4.700e-73
Identity = 142/177 (80.23%), Postives = 150/177 (84.75%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNR EI KYLFQEGV YAKKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPM--GPGGDRPRGPPRFEGD 120
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK  +P GRP   GP GDRPRGPPRFEGD
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120

Query: 121 RPRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF-GGARRPGFGRGAGGFGGGAP 175
           RPRFGDR+GYR GPRG PG+FGGEKGGAPA++QPSF     RPGFGRG GG  G  P
Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGGGFGAGP 177

[Close]

BLAST of Spo04381.1 vs. ExPASy Swiss-Prot
Match: RS10B_ORYSJ (40S ribosomal protein S10-2 OS=Oryza sativa subsp. japonica GN=RPS10-2 PE=2 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 4.700e-73
Identity = 142/177 (80.23%), Postives = 150/177 (84.75%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MII +KNR EI KYLFQEGV YAKKDYNLAKHP IDVPNLQVIKLMQSFKSKEYVRETF+
Sbjct: 1   MIIPKKNRNEICKYLFQEGVLYAKKDYNLAKHPQIDVPNLQVIKLMQSFKSKEYVRETFS 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPM--GPGGDRPRGPPRFEGD 120
           W +YYWYLTNDGIE LR YLNLPSEIVPATLKK  +P GRP   GP GDRPRGPPRFEGD
Sbjct: 61  WQYYYWYLTNDGIEHLRNYLNLPSEIVPATLKKSARPPGRPFGSGPPGDRPRGPPRFEGD 120

Query: 121 RPRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF-GGARRPGFGRGAGGFGGGAP 175
           RPRFGDR+GYR GPRG PG+FGGEKGGAPA++QPSF     RPGFGRG GG  G  P
Sbjct: 121 RPRFGDRDGYRGGPRGAPGDFGGEKGGAPAEFQPSFRSSGGRPGFGRGGGGGFGAGP 177

[Close]

BLAST of Spo04381.1 vs. ExPASy Swiss-Prot
Match: RS101_ARATH (40S ribosomal protein S10-1 OS=Arabidopsis thaliana GN=RPS10A PE=2 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.200e-70
Identity = 139/179 (77.65%), Postives = 152/179 (84.92%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NR+EI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPM-GPGGDRPRGPPRFEGDR 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK  KP GRP  GP GDR RGPPR +GDR
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120

Query: 121 PRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF-GGARRPGFGRGAGGFGGGAPGAA 178
           PRFGDR+GYR GPRG     G EKGGAPAD+QPSF GG  RPGFGRGAGG+   AP  +
Sbjct: 121 PRFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGS 174

[Close]

BLAST of Spo04381.1 vs. ExPASy Swiss-Prot
Match: RS103_ARATH (40S ribosomal protein S10-3 OS=Arabidopsis thaliana GN=RPS10C PE=2 SV=2)

HSP 1 Score: 265.8 bits (678), Expect = 3.700e-70
Identity = 141/178 (79.21%), Postives = 153/178 (85.96%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRKEI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPM-GPGGDRPRGPPRFEGDR 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK  KP GRP  GP GDR RGP    GDR
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGDR 120

Query: 121 PRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSFGGARRPGFGRGAGGFGGGAPGAA 178
           PRFGDR+GYR+GPR   GEFGGEKGGAPADYQPSF G+ R GFGRGAGG+   AP  +
Sbjct: 121 PRFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSGR-GFGRGAGGYSAAAPSGS 176

[Close]

BLAST of Spo04381.1 vs. ExPASy Swiss-Prot
Match: RS102_ARATH (40S ribosomal protein S10-2 OS=Arabidopsis thaliana GN=RPS10B PE=2 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 8.600e-67
Identity = 138/180 (76.67%), Postives = 154/180 (85.56%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDID-VPNLQVIKLMQSFKSKEYVRETF 60
           MIISE NR+EISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPMGPGGDRPRGPPRFEGDR 120
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRP G GGDRPRGPPR +G+R
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGGGGDRPRGPPRGDGER 120

Query: 121 PRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF---GGARRPGFGRGAGGFGGGAPGA 177
            RFGDR+GYR GP+   GE+ G+K GAPADYQP F    G  R GFGRGAGGFGGGA G+
Sbjct: 121 -RFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGAAGS 177

[Close]

BLAST of Spo04381.1 vs. TAIR (Arabidopsis)
Match: AT4G25740.1 (RNA binding Plectin/S10 domain-containing protein)

HSP 1 Score: 266.5 bits (680), Expect = 1.200e-71
Identity = 139/179 (77.65%), Postives = 152/179 (84.92%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NR+EI KYLF+EGVC+AKKD+NL KHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPM-GPGGDRPRGPPRFEGDR 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK  KP GRP  GP GDR RGPPR +GDR
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGDR 120

Query: 121 PRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF-GGARRPGFGRGAGGFGGGAPGAA 178
           PRFGDR+GYR GPRG     G EKGGAPAD+QPSF GG  RPGFGRGAGG+   AP  +
Sbjct: 121 PRFGDRDGYRGGPRG-----GDEKGGAPADFQPSFQGGGGRPGFGRGAGGYSAAAPSGS 174

[Close]

BLAST of Spo04381.1 vs. TAIR (Arabidopsis)
Match: AT5G52650.1 (RNA binding Plectin/S10 domain-containing protein)

HSP 1 Score: 265.8 bits (678), Expect = 2.100e-71
Identity = 141/178 (79.21%), Postives = 153/178 (85.96%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDIDVPNLQVIKLMQSFKSKEYVRETFA 60
           MIISE NRKEI KYLF+EGVC+AKKD+NLAKHP IDVPNLQVIKLMQSFKSKEYVRETFA
Sbjct: 1   MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLIDVPNLQVIKLMQSFKSKEYVRETFA 60

Query: 61  WMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPM-GPGGDRPRGPPRFEGDR 120
           WMHYYW+LTN+GIEFLRTYLNLPS++VPATLKK  KP GRP  GP GDR RGP    GDR
Sbjct: 61  WMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGDR 120

Query: 121 PRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSFGGARRPGFGRGAGGFGGGAPGAA 178
           PRFGDR+GYR+GPR   GEFGGEKGGAPADYQPSF G+ R GFGRGAGG+   AP  +
Sbjct: 121 PRFGDRDGYRAGPRA-GGEFGGEKGGAPADYQPSFQGSGR-GFGRGAGGYSAAAPSGS 176

[Close]

BLAST of Spo04381.1 vs. TAIR (Arabidopsis)
Match: AT5G41520.1 (RNA binding Plectin/S10 domain-containing protein)

HSP 1 Score: 254.6 bits (649), Expect = 4.800e-68
Identity = 138/180 (76.67%), Postives = 154/180 (85.56%), Query Frame = 1

		  
Query: 1   MIISEKNRKEISKYLFQEGVCYAKKDYNLAKHPDID-VPNLQVIKLMQSFKSKEYVRETF 60
           MIISE NR+EISKYLF+EGV +AKKD+NL +HP I+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1   MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60

Query: 61  AWMHYYWYLTNDGIEFLRTYLNLPSEIVPATLKKQMKPAGRPMGPGGDRPRGPPRFEGDR 120
           AWMHYYW+LTN+GI+FLRTYLNLPSEIVPATLKKQ KP GRP G GGDRPRGPPR +G+R
Sbjct: 61  AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGGGGDRPRGPPRGDGER 120

Query: 121 PRFGDREGYRSGPRGPPGEFGGEKGGAPADYQPSF---GGARRPGFGRGAGGFGGGAPGA 177
            RFGDR+GYR GP+   GE+ G+K GAPADYQP F    G  R GFGRGAGGFGGGA G+
Sbjct: 121 -RFGDRDGYRGGPKS-GGEY-GDKAGAPADYQPGFRGGAGGARQGFGRGAGGFGGGAAGS 177

The following BLAST results are available for this feature:

BLAST of Spo04381.1 vs. NCBI nr
BLAST of Spo04381.1 vs. UniProtKB/TrEMBL
BLAST of Spo04381.1 vs. ExPASy Swiss-Prot
BLAST of Spo04381.1 vs. TAIR (Arabidopsis)

BLAST of Spo04381.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902217602\|gb\|KNA17791.1\|	5.3e-101	100.	hypothetical protein SOVF_0768...	[more]
gi\|731321949\|ref\|XP_010671623.1\|	2.6e-87	91.1	PREDICTED: 40S ribosomal prote...	[more]
gi\|460368763\|ref\|XP_004230234.1\|	1.7e-83	91.4	PREDICTED: 40S ribosomal prote...	[more]
gi\|568214461\|ref\|NP_001275161.1\|	3.8e-83	90.9	40S ribosomal protein S10-like...	[more]
gi\|970003254\|ref\|XP_015062402.1\|	3.8e-83	90.9	PREDICTED: 40S ribosomal prote...	[more]

BLAST of Spo04381.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RE56_SPIOL	3.7e-101	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CVQ7_BETVU	1.8e-87	91.1	Uncharacterized protein OS=Bet...	[more]
K4B101_SOLLC	1.2e-83	91.4	Uncharacterized protein OS=Sol...	[more]
Q2XTB2_SOLTU	2.7e-83	90.9	40S ribosomal protein S10-like...	[more]
A0A0V0HBJ7_SOLCH	3.5e-83	89.3	Putative ovule protein OS=Sola...	[more]

BLAST of Spo04381.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
RS10A_ORYSJ	4.7e-73	80.2	40S ribosomal protein S10-1 OS...	[more]
RS10B_ORYSJ	4.7e-73	80.2	40S ribosomal protein S10-2 OS...	[more]
RS101_ARATH	2.2e-70	77.6	40S ribosomal protein S10-1 OS...	[more]
RS103_ARATH	3.7e-70	79.2	40S ribosomal protein S10-3 OS...	[more]
RS102_ARATH	8.6e-67	76.6	40S ribosomal protein S10-2 OS...	[more]

BLAST of Spo04381.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3

Position :

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x 1


Match Name	E-value	Identity	Description
AT4G25740.1	1.2e-71	77.6	RNA binding Plectin/S10 domain...	[more]
AT5G52650.1	2.1e-71	79.2	RNA binding Plectin/S10 domain...	[more]
AT5G41520.1	4.8e-68	76.6	RNA binding Plectin/S10 domain...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005326	Plectin/S10, N-terminal	PFAM	PF03501	S10_plectin	coord: 3..94 score: 4.6
None	No IPR available	PANTHER	PTHR12146	40S RIBOSOMAL PROTEIN S10	coord: 2..177 score: 6.2E
None	No IPR available	PANTHER	PTHR12146:SF7	SUBFAMILY NOT NAMED	coord: 2..177 score: 6.2E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006412	translation
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0051258	protein polymerization
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0001510	RNA methylation
biological_process	GO:0000271	polysaccharide biosynthetic process
biological_process	GO:0009825	multidimensional cell growth
biological_process	GO:0007018	microtubule-based movement
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0048767	root hair elongation
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006084	acetyl-CoA metabolic process
biological_process	GO:0043481	anthocyanin accumulation in tissues in response to UV light
biological_process	GO:0016132	brassinosteroid biosynthetic process
biological_process	GO:0009932	cell tip growth
biological_process	GO:0071555	cell wall organization
biological_process	GO:0019344	cysteine biosynthetic process
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0009740	gibberellic acid mediated signaling pathway
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0010162	seed dormancy process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0006448	regulation of translational elongation
biological_process	GO:0006241	CTP biosynthetic process
biological_process	GO:0006183	GTP biosynthetic process
biological_process	GO:0006165	nucleoside diphosphate phosphorylation
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0009585	red, far-red light phototransduction
biological_process	GO:0006228	UTP biosynthetic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006833	water transport
biological_process	GO:0006544	glycine metabolic process
biological_process	GO:0009097	isoleucine biosynthetic process
biological_process	GO:0006563	L-serine metabolic process
biological_process	GO:0009089	lysine biosynthetic process via diaminopimelate
biological_process	GO:0009086	methionine biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006164	purine nucleotide biosynthetic process
biological_process	GO:0009088	threonine biosynthetic process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0005874	microtubule
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0005743	mitochondrial inner membrane
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0036459	thiol-dependent ubiquitinyl hydrolase activity
molecular_function	GO:0008234	cysteine-type peptidase activity
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0005200	structural constituent of cytoskeleton
molecular_function	GO:0005525	GTP binding
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0004550	nucleoside diphosphate kinase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0004073	aspartate-semialdehyde dehydrogenase activity
molecular_function	GO:0003942	N-acetyl-gamma-glutamyl-phosphate reductase activity
molecular_function	GO:0051287	NAD binding
molecular_function	GO:0050661	NADP binding
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003746	translation elongation factor activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo13279	0.83	Barchart \| Table
Spo20997	0.82	Barchart \| Table
Spo12311	0.82	Barchart \| Table
Spo22394	0.81	Barchart \| Table
Spo23498	0.81	Barchart \| Table
Spo20647	0.80	Barchart \| Table
Spo12048	0.79	Barchart \| Table
Spo15604	0.79	Barchart \| Table
Spo26636	0.79	Barchart \| Table
Spo23241	0.79	Barchart \| Table
Spo12304	0.78	Barchart \| Table
Spo21922	0.78	Barchart \| Table
Spo12681	0.78	Barchart \| Table
Spo11026	0.78	Barchart \| Table
Spo05589	0.78	Barchart \| Table
Spo00170	0.78	Barchart \| Table
Spo26884	0.77	Barchart \| Table
Spo20161	0.77	Barchart \| Table
Spo02942	0.77	Barchart \| Table
Spo25266	0.76	Barchart \| Table
Spo06501	0.76	Barchart \| Table
Spo14875	0.75	Barchart \| Table
Spo19236	0.75	Barchart \| Table
Spo17929	0.75	Barchart \| Table
Spo15751	0.75	Barchart \| Table
Spo25669	0.75	Barchart \| Table
Spo17271	0.75	Barchart \| Table
Spo27105	0.75	Barchart \| Table
Spo09714	0.74	Barchart \| Table
Spo18094	0.74	Barchart \| Table
Spo01061	0.74	Barchart \| Table
Spo04667	0.74	Barchart \| Table
Spo23038	0.74	Barchart \| Table
Spo22310	0.74	Barchart \| Table
Spo02011	0.73	Barchart \| Table
Spo18647	0.73	Barchart \| Table
Spo20789	0.73	Barchart \| Table
Spo12598	0.73	Barchart \| Table
Spo11943	0.73	Barchart \| Table
Spo18901	0.73	Barchart \| Table
Spo06318	0.73	Barchart \| Table
Spo08961	0.72	Barchart \| Table
Spo14692	0.72	Barchart \| Table
Spo00780	0.72	Barchart \| Table
Spo03979	0.72	Barchart \| Table
Spo15666	0.72	Barchart \| Table
Spo18370	0.72	Barchart \| Table
Spo13481	0.72	Barchart \| Table
Spo05783	0.72	Barchart \| Table
Spo10599	0.72	Barchart \| Table
Spo23220	0.72	Barchart \| Table
Spo07145	0.71	Barchart \| Table
Spo07223	0.71	Barchart \| Table
Spo08082	0.71	Barchart \| Table
Spo21186	0.71	Barchart \| Table
Spo16627	0.71	Barchart \| Table
Spo08488	0.71	Barchart \| Table
Spo25954	0.71	Barchart \| Table
Spo05064	0.71	Barchart \| Table
Spo08768	0.71	Barchart \| Table
Spo07599	0.70	Barchart \| Table
Spo09414	0.70	Barchart \| Table
Spo19439	0.70	Barchart \| Table
Spo02380	0.70	Barchart \| Table
Spo06857	0.70	Barchart \| Table
Spo12759	0.70	Barchart \| Table
Spo04208	0.70	Barchart \| Table
Spo15150	0.70	Barchart \| Table
Spo02534	0.70	Barchart \| Table
Spo20141	0.70	Barchart \| Table
Spo07402	0.70	Barchart \| Table
Spo17662	0.69	Barchart \| Table
Spo02838	0.69	Barchart \| Table
Spo02989	0.69	Barchart \| Table
Spo03802	0.69	Barchart \| Table
Spo04454	0.69	Barchart \| Table
Spo07920	0.69	Barchart \| Table
Spo11850	0.69	Barchart \| Table
Spo15438	0.69	Barchart \| Table
Spo15517	0.69	Barchart \| Table
Spo15939	0.69	Barchart \| Table
Spo19200	0.69	Barchart \| Table
Spo21655	0.69	Barchart \| Table
Spo21995	0.69	Barchart \| Table
Spo25181	0.69	Barchart \| Table
Spo26442	0.69	Barchart \| Table
Spo17109	0.68	Barchart \| Table
Spo07668	0.68	Barchart \| Table
Spo22401	0.68	Barchart \| Table
Spo27223	0.68	Barchart \| Table
Spo14447	0.68	Barchart \| Table
Spo14404	0.68	Barchart \| Table
Spo13561	0.68	Barchart \| Table
Spo20846	0.68	Barchart \| Table
Spo16097	0.68	Barchart \| Table
Spo11679	0.68	Barchart \| Table
Spo05275	0.68	Barchart \| Table
Spo17110	0.68	Barchart \| Table
Spo24414	0.68	Barchart \| Table
Spo22740	0.68	Barchart \| Table
Spo23193	0.67	Barchart \| Table
Spo12191	0.67	Barchart \| Table
Spo08160	0.67	Barchart \| Table
Spo19352	0.67	Barchart \| Table
Spo06706	0.67	Barchart \| Table
Spo01035	0.67	Barchart \| Table
Spo06444	0.66	Barchart \| Table
Spo06742	0.66	Barchart \| Table
Spo02189	0.66	Barchart \| Table
Spo26421	0.66	Barchart \| Table
Spo17500	0.66	Barchart \| Table
Spo08816	0.66	Barchart \| Table
Spo22200	0.66	Barchart \| Table
Spo19681	0.66	Barchart \| Table
Spo15728	0.66	Barchart \| Table
Spo05632	0.65	Barchart \| Table
Spo19207	0.65	Barchart \| Table
Spo25289	0.65	Barchart \| Table
Spo25523	0.65	Barchart \| Table
Spo25635	0.65	Barchart \| Table
Spo06904	0.65	Barchart \| Table
Spo05547	0.65	Barchart \| Table
Spo26249	0.65	Barchart \| Table
Spo07016	0.65	Barchart \| Table