Spo02572 (gene) | SpinachBase

Overview


Name	Spo02572
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Protein disulfide isomerase (PDI)-like protein 3
Location	chr3 : 5842774 .. 5847509 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CCACATATTGCGTACCCGGTTTTCGCAATACTTAATTTTGGCCGATCTCTTCCCTTTTCTCTCTCCTAGGGTTCCTAAAAAGTAAAAATTATCTATTGCCTTTGAATATCGGATTCCTTATTTTTGCTGTTTATCATCTTAGGTTTGTTTCTAATCGTACTTTCGTTATTTAATTGAAATTTTTGGGATCAAATTTTCGGTTTTAATTTTGAAAGATAACTTATTGTTGAATATTATTGTGATTAGGTTTTATTTTGCAAGTTTTCTAGGATGGATTCGGCAAGGAAGAGAAAATCGGCAGATTCTGCGACAGTTTTGAAGAAAACAGGAGATATTGTGGATGATTTTTGGCCACTGAAACTGAAGGATCCCTTTGAGAATTTGTCCCGCTTTCAAGAGAATGGTAAGTGCTATAACAGATTCTTCTATTCTTTTCTTCGTGTTAGTAAGGACGGAGAATATGGTGATGATATAAAGAAGATGGTTTCTGAGTTGCCTGATATGGAGATTGGCGACCCCTTTGATGTTTTATCGTTGTTGTCCTTTAAGGGTCAGAGTAATTACCTTGTTCGAAACAACAATGATAATGATCAAGTCGAATTGAACAAGGATACATTTCATGGGAAATATGTTATGGTTTGCTGGTTTCATGTCCCTATTCATTGTCTAGATGGAGATGCACTCTTTATCCAGTCTGCTGCAAATATCTGTTATGAAATGTTTGATTTATTTGATGATTTTGAGATTGTGTTGGGTTTGAAGATGAATCCTAAGTATAATAATCAACGGGTCTTTTCCCACTTCTTGTCGGCTTTTCCCCCCTCTTGCCTTGTAGTACCCTTTGATGACCCCAAGCGTAGTGACTATATATGCTGTTATCTTGAAGTTAGAATTCGTTGCGAATGTTTCCTTGTGGATGGTAATAGCATTGCTTTGTTCTCTGGAGAACCTGACTTCGAAATGGGGGAAAGAGTTAGCGCCTCTCGCTTGTGTAGTAATTATTCTGCTAAAGACTTGGAAATTATCAGTCTTCCTAAGATAACACGGCTTCGGAGCATTATTAATAATACTGTTGTACGTAGGATTAATGAAGAAGGTGTCCAGGAGGAGATGTCTTTCTTGAGACTCAATGAGAAGAAGGTTGTCGGTTTGTACTTGTGGACTGAAGGAATTAGGTGTATCACTGACGAAAGTTTCATTGACACACTTGACATGGTCAATAAACAATGCAGAGGTACTAAGCAAGAATTCGAGATTGTAGTGGTCTACATACCCTTTCTTCACTGTATTCCCCCAAAGATTTACCAGGCGAAAATAGATAACTTTATGGAGAAAAAAAAGATATCTTGGTGGCGGATGCCCTTCAACACCATATGCAACAAACTTGGGAACACTGCGGATGTATTCCTGGTCAGCTAGTTATTGTGGGACCCAATACTGAATACGTGGATCTTTATGGACGAGATATCTTGGGCAAATACGGATCTGTTGCATATCCGTTCACTAGAGAGGGCCTTATCAGTAATGGTGTTAAGTTGTTGAGGGAACTCACCTTGGAGTCATTGCTCACTTCTGAGTCATGTAACTATGTTCTTAAAGATGGCTTCACTCAGATCAATGTGGCTTCACTCCAACCCAGGGACATACTTCTATATTTTGGTTCTGAAGACGGTTCTCTTATTAAAAGTCTACAGAATTTGTATTCTGAGGTTAAACTTGAGAATCCTAATTTTGAAGTGATTTATGTTCGCCGAAACAATACCAGCAACTATTGTAATAACATGGATATTGGTCTTCCTTGCTTGGTACGCCCCTTCGAAGCTGATCATTCATCATCTCTGGGGAAAAAGTTATTCCCACACGTTGTTCCAGTTGATACCTTCGTTCGATTTGGAAACGATGGCCATGTTTGTTCAGTTGGGGGCAATAATCTACGTGAGGATGTTTGTTCAGTTGGGGGCAATAGTCTACGTGAGGATGTCATTTTTATGCTTGAACGCCTCGGGATCATGGAGGATTACATTAGATACTGTTGTTGACCTACTTAGCTCAAGGGCTTACGTGTCTTATAATAGCCTGAGGTATGTTATGCTCTATTAGTTTGTTTTGTTAACGTTCTTTAAACAAGTTATTTTGCACAAATTTCATGGGTTGTTTCCTGTCCTTTTTCTTCTTACAACAAAGGCACAAAACTGCTCTCCTTTTCCTATGTGAGTCTTTTGGTTTCTTGACTGATATATGCCAGATCTGTCTTGGGTGTGTGCCAGTTTCTGCTTGCTCTTTGTCTTTGTCGGGATTGGTGTGCTTAGGTTTTTTTGACTGATTTTGGTGTTCCATTGGCATTTTTGTTTTCTTTGTCATGTGAGCGCCAAGAAAAGCTTGTAAAATTTGTTTGCAATAATGATTGTCTTTGTTCATTTTACATAATTGTAATAACTTTCAAAAGGAATATCAGTTTATTGATTTATAATTATGTTGGATTGCAACTGTTTTCATTTAGACTCCGTTTGGTAGGATGTAAAACATTTTCATGGAAAACTACTTTTCTGTATTTTCTATTTTAGGTCCTTTGGTTTTCTAAGGAGTGTAAAACATATTTTCATAGGAGTAAAATTGCGATGAAAACCATTCTTCCTTTTCATGGAAGGGAAAATATGTTTTCCTCCATTTTCCTTTCCTTTTTAGTACACTTCTTCCACCTACCTCCTCACTTATCACTTCCCCTTGCATTTTCCTTTTTCCCCATCGTTTTCCTTACATGCAACCAATAATGGAAGATTAATCTTGCAATTTTTTCCATTGTAAATTGTTTTCCATGGAAATTGTTTTACATTGAAAATGTTTTACACCCAACCAAACGGAGCCTTAAAACATTTCTATGTTGGTGAGCTAAGAGGAGTTGTCGTAATTTCAATTGGTTGCATTTCAGTGCCAGTATGTGAATCACTCATAGGTTACATTTCATTAGCATCTGTTCCTGTTAGCTATGTTAAGTCTTTTTTAGAGATTATAATTTCCCTCTCTCTGATTTTATTCACCTTACAGTTGTAGTGGAAGAAGATAAGAAAACCAATTGCTTATATGCCATTTTTCTAGTTGTTGGTGTGTACAGTTCATGATTTTCAAGGTCGCTGTACCATAGGTTATTTTTTTGAATTTTGTTTTTGGTACAATCTAATTGTTTATTTTGTGCATGTAGTTGTGATTCGTTATTTGTTTGGCTTTAGAGAGATATTACACATTCATGCTTGGACCTCGATGCTTTGTGGTTGTCAGCTTCCCATGCTTTGTAACTGATATTATATTGAAATTAGGTATTTCTCACATATATTGGCTTGTGTTAAAGCTAGACTTTGGGGTGTTTATTTAACCTATCTGCTACTAAATGCTACTGTTTTGTTAAAAAAAAAAAAAAGCATGATCAAGAGTGATGTATCTTTAAAGCTTCTCTCTTTAAATTTTAATTCCGGTGGACATGTTGAAGTATAATAGCCTTTTCTTGGTACTTGGTAAGCATTTTTTTTCCAGTTTTGATTTAACAATTTTTGAACAAATACAGTTGTACAGCTTAATTTCTGTTGTTTCTCACTTTTTTTGGGGGAAGGAGGCTTATTTTCTCTTATGTTCCCCCTCTCTTTGTTTTAAAGCAAGTTTAAATGTGTCTTGAAGAACTGACTAGCTTTATTTTCATTTCTTTTTTTAATTTTATTTGCAAGGCTTTAAATTTTGTTCCACAAAAGCAAAAGACAAAAACATAAAAATAAAATGTTTGCTCATGCTTATGATGAGATATATAGGCCCTTGGTGTTCTTTCTCATGCTCCAAACGTCACCGTTCACCTCCTTAGTACCGATGTTTGTCATGTTTCCTACTTGTATGCGCTTTACTTTTGGAAATTTTGCGAGAAACCATTTTTCAAAATGTTATTTTTGCAAGAAACTACCTTAAAAAAAAGTGGCACAAAACTACCTTTTAAAAGGTCTTGGTTGCAAAAGGGTATCTTATCTCATTTTTCGGCGATTTGACTTATTTTCTCCTTTACTTTATCACTGTGATTTAATGTTTTGCTTTGAACTTGAATTAAGATGATTTTGTCGTGGCTGATTTCTTAATTCTACTTTGATTTTTTGGAAATTAATTGCTTCAATTATTTGTCATACAATGTGTTGTTTCGCCGGAAACCTTTATGTCAGCCAGTAATCTTATGTTATTTTTTGTGATGTAGGGTTTGCCTTTTTCTGTGGGTTTACTCTTGATTACATGCTCTCTGGGTTTGGGCTTTGGCCCTGTTTCTTGTTCAATTAGGGTTTATTTTGATTTTGGTTGACTGATTCATTTGGAGTGAGATTGGCTGTAGAATGTTTCAATGATGAGATACCATTTTGGAATTTGCTACATTGATGGTGAAGAGTATTATTGGATTATTGTTGCATTAATGTTTGATAAAAATGTTTTGGTGGAAAAATGTTGTAGCTTGTTGCTCTGGTTGAAGATCTATAGAATGTCCTATTATGGGTTTATTTCTAGTTTATCTATTATAAATTTTATTGCTACTCATATAAAGGATAGTTATTTATCCCCTATTTGACTTTGTTGTTGTACCTTGTAGGTAAGACTTATATGTATCTAGTTTGCAATCTCGTCACCTTGTGGTTTAGATTATTGAGGTGATTAGTTTTGGTAGTTTCCATCTTGCTTTATGTGAGCTTATGGAGAAGAAATCCGGATCCTTTTAG

mRNA sequence

CCACATATTGCGTACCCGGTTTTCGCAATACTTAATTTTGGCCGATCTCTTCCCTTTTCTCTCTCCTAGGGTTCCTAAAAAGTAAAAATTATCTATTGCCTTTGAATATCGGATTCCTTATTTTTGCTGTTTATCATCTTAGGATGGATTCGGCAAGGAAGAGAAAATCGGCAGATTCTGCGACAGTTTTGAAGAAAACAGGAGATATTGTGGATGATTTTTGGCCACTGAAACTGAAGGATCCCTTTGAGAATTTGTCCCGCTTTCAAGAGAATGTTAGAATTCGTTGCGAATGTTTCCTTGTGGATGGTAATAGCATTGCTTTGTTCTCTGGAGAACCTGACTTCGAAATGGGGGAAAGAGTTAGCGCCTCTCGCTTGTGTAGTAATTATTCTGCTAAAGACTTGGAAATTATCAGTCTTCCTAAGATAACACGGCTTCGGAGCATTATTAATAATACTGTTGTACGTAGGATTAATGAAGAAGGTGTCCAGGAGGAGATGTCTTTCTTGAGACTCAATGAGAAGAAGGTTGTCGATATCTTGGTGGCGGATGCCCTTCAACACCATATGCAACAAACTTGGGAACACTGCGGATGTATTCCTGGTCAGCTAGTTATTGTGGGACCCAATACTGAATACGTGGATCTTTATGGACGAGATATCTTGGGCAAATACGGATCTGTTGCATATCCGTTCACTAGAGAGGGCCTTATCAGTAATGGTGTTAAGTTGTTGAGGGAACTCACCTTGGAGTCATTGCTCACTTCTGAGTCATGTAACTATGTTCTTAAAGATGGCTTCACTCAGATCAATGTGGCTTCACTCCAACCCAGGGACATACTTCTATATTTTGGTTCTGAAGACGGTTCTCTTATTAAAAGTCTACAGAATTTGTATTCTGAGGTTAAACTTGAGAATCCTAATTTTGAAGTGATTTATGTTCGCCGAAACAATACCAGCAACTATTGTAATAACATGGATATTGGTCTTCCTTGCTTGGTACGCCCCTTCGAAGCTGATCATTCATCATCTCTGGGGAAAAAGTTATTCCCACACGTTGTTCCAGTTGATACCTTCGTTCGATTTGGAAACGATGGCCATTTGGGGGCAATAGTCTACGTGAGGATGTCATTTTTATGCTTGAACGCCTCGGGATCATGGAGGATTACATTAGATACTGTTGTTGACCTACTTAGCTCAAGGGCTTACGTGTCTTATAATAGCCTGAGTTTCCATCTTGCTTTATGTGAGCTTATGGAGAAGAAATCCGGATCCTTTTAG

Coding sequence (CDS)

ATGGATTCGGCAAGGAAGAGAAAATCGGCAGATTCTGCGACAGTTTTGAAGAAAACAGGAGATATTGTGGATGATTTTTGGCCACTGAAACTGAAGGATCCCTTTGAGAATTTGTCCCGCTTTCAAGAGAATGTTAGAATTCGTTGCGAATGTTTCCTTGTGGATGGTAATAGCATTGCTTTGTTCTCTGGAGAACCTGACTTCGAAATGGGGGAAAGAGTTAGCGCCTCTCGCTTGTGTAGTAATTATTCTGCTAAAGACTTGGAAATTATCAGTCTTCCTAAGATAACACGGCTTCGGAGCATTATTAATAATACTGTTGTACGTAGGATTAATGAAGAAGGTGTCCAGGAGGAGATGTCTTTCTTGAGACTCAATGAGAAGAAGGTTGTCGATATCTTGGTGGCGGATGCCCTTCAACACCATATGCAACAAACTTGGGAACACTGCGGATGTATTCCTGGTCAGCTAGTTATTGTGGGACCCAATACTGAATACGTGGATCTTTATGGACGAGATATCTTGGGCAAATACGGATCTGTTGCATATCCGTTCACTAGAGAGGGCCTTATCAGTAATGGTGTTAAGTTGTTGAGGGAACTCACCTTGGAGTCATTGCTCACTTCTGAGTCATGTAACTATGTTCTTAAAGATGGCTTCACTCAGATCAATGTGGCTTCACTCCAACCCAGGGACATACTTCTATATTTTGGTTCTGAAGACGGTTCTCTTATTAAAAGTCTACAGAATTTGTATTCTGAGGTTAAACTTGAGAATCCTAATTTTGAAGTGATTTATGTTCGCCGAAACAATACCAGCAACTATTGTAATAACATGGATATTGGTCTTCCTTGCTTGGTACGCCCCTTCGAAGCTGATCATTCATCATCTCTGGGGAAAAAGTTATTCCCACACGTTGTTCCAGTTGATACCTTCGTTCGATTTGGAAACGATGGCCATTTGGGGGCAATAGTCTACGTGAGGATGTCATTTTTATGCTTGAACGCCTCGGGATCATGGAGGATTACATTAGATACTGTTGTTGACCTACTTAGCTCAAGGGCTTACGTGTCTTATAATAGCCTGAGTTTCCATCTTGCTTTATGTGAGCTTATGGAGAAGAAATCCGGATCCTTTTAG

Protein sequence

MDSARKRKSADSATVLKKTGDIVDDFWPLKLKDPFENLSRFQENVRIRCECFLVDGNSIALFSGEPDFEMGERVSASRLCSNYSAKDLEIISLPKITRLRSIINNTVVRRINEEGVQEEMSFLRLNEKKVVDILVADALQHHMQQTWEHCGCIPGQLVIVGPNTEYVDLYGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYVLKDGFTQINVASLQPRDILLYFGSEDGSLIKSLQNLYSEVKLENPNFEVIYVRRNNTSNYCNNMDIGLPCLVRPFEADHSSSLGKKLFPHVVPVDTFVRFGNDGHLGAIVYVRMSFLCLNASGSWRITLDTVVDLLSSRAYVSYNSLSFHLALCELMEKKSGSF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo02572.1	Spo02572.1	mRNA

Homology

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BLAST of Spo02572.1 vs. NCBI nr
Match: gi|902231640|gb|KNA22336.1| (hypothetical protein SOVF_034910 [Spinacia oleracea])

HSP 1 Score: 534.6 bits (1376), Expect = 1.400e-148
Identity = 279/335 (83.28%), Postives = 284/335 (84.78%), Query Frame = 1

		  
Query: 26  FWPLKLKDPFENLSRFQE-----NVRIRCECFLVDGNSIALFSGEPDFEMGERVSASRLC 85
           F P  L  PF++  R         VRIRCECFLVDGNSIALFSGEPDFEMGERVSASRLC
Sbjct: 182 FPPSCLVVPFDDPKRSDYICCYLEVRIRCECFLVDGNSIALFSGEPDFEMGERVSASRLC 241

Query: 86  SNYSAKDLEIISLPKITRLRSIINNTVVRRINEEGVQEEMS--FLRLNEKKVV------- 145
           SNYSAKDLEIISLPKITRLRSIINNTVVRRINEEGVQEEMS   L  NEKKVV       
Sbjct: 242 SNYSAKDLEIISLPKITRLRSIINNTVVRRINEEGVQEEMSFLRL--NEKKVVGLYLWTE 301

Query: 146 ----------------------DILVADALQHHMQQTWEHCGCIPGQLVIVGPNTEYVDL 205
                                 DILVADALQHHMQQTWEHCGCIPGQLVIVGPNTEYVDL
Sbjct: 302 GIRCITDESFIDTLDMVNKQCRDILVADALQHHMQQTWEHCGCIPGQLVIVGPNTEYVDL 361

Query: 206 YGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYVLKDGFTQINVASLQ 265
           YGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYVLKDGFTQINVASLQ
Sbjct: 362 YGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYVLKDGFTQINVASLQ 421

Query: 266 PRDILLYFGSEDGSLIKSLQNLYSEVKLENPNFEVIYVRRNNTSNYCNNMDIGLPCLVRP 325
           PRDILLYFGSEDGSLIKSLQNLYSEVKLENPNFEVIYVRRNNTSNYCNNMDIGLPCLVRP
Sbjct: 422 PRDILLYFGSEDGSLIKSLQNLYSEVKLENPNFEVIYVRRNNTSNYCNNMDIGLPCLVRP 481

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BLAST of Spo02572.1 vs. NCBI nr
Match: gi|731373910|ref|XP_010666792.1| (PREDICTED: uncharacterized protein LOC104883913 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 119.4 bits (298), Expect = 1.400e-23
Identity = 66/172 (38.37%), Postives = 110/172 (63.95%), Query Frame = 1

		  
Query: 156 QLVIVGPNTEYVDLYGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYV 215
           QL+I      ++D+YG +++  +G  AYPF+RE L+   +   +E+TLE+LL S+S +Y+
Sbjct: 565 QLIIFRAQDAHIDIYGAEVMITFGIDAYPFSREELVQRELNKFKEVTLETLLVSKSRDYL 624

Query: 216 LKDGFTQINVASLQPRDILLYFGSEDGSLIKSLQNL---YSEVKLENPNFEVIYVRRNNT 275
           LK G   I VA L+ ++IL++  S   + I     L   Y E + +NP+FEV++VR++++
Sbjct: 625 LKGG-ANIPVAHLRGKNILVWISSLSVNCIPFYHKLFLWYKENQAKNPDFEVVFVRKHSS 684

Query: 276 SNYCNNMDIG--LPCLVRPFEADHSSSLGKKLFPHV-VPVDTFVRFGNDGHL 322
               +++ +   +P LV PF+ADHSSS+ +KLFP++ +  D  V+FG DG L
Sbjct: 685 DPMDDDLTLSDVMPWLVCPFDADHSSSVQEKLFPNMRLNDDDLVQFGTDGLL 735

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BLAST of Spo02572.1 vs. NCBI nr
Match: gi|870842428|gb|KMS95849.1| (hypothetical protein BVRB_004500 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 115.5 bits (288), Expect = 2.000e-22
Identity = 65/173 (37.57%), Postives = 107/173 (61.85%), Query Frame = 1

		  
Query: 156 QLVIVGPNTEYVDLYGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYV 215
           QL+I      ++D+YG +++  +G  AYPF+RE L+   +   +E+TLE+LL S+S +Y+
Sbjct: 565 QLIIFRAQDAHIDIYGAEVMSTFGIDAYPFSREELVQRELNKFKEVTLETLLISKSRDYL 624

Query: 216 LKDGFTQINVASLQPRDILLYFGSEDGSLIKSLQNL---YSEVKLENPNFEVIYVRRNNT 275
           LK G   I VA L+ ++IL++  S   + I     L   Y E +  NP+FEV+ VR++ +
Sbjct: 625 LKGG-ANIPVAHLRGKNILVWISSLSVNCIPFYHELLLWYKENQANNPDFEVVCVRKHYS 684

Query: 276 SNYCNNMDIG--LPCLVRPFEADHSSSLGKKLFPH--VVPVDTFVRFGNDGHL 322
               +++ +   +P LV PF+ADHSSS+ +KLFP+  ++  +  V+FG DG L
Sbjct: 685 DAMDDDLTLSDVMPWLVCPFDADHSSSVQEKLFPNMRMINDNDLVQFGTDGLL 736

[Close]

BLAST of Spo02572.1 vs. NCBI nr
Match: gi|902213548|gb|KNA17287.1| (hypothetical protein SOVF_081260 [Spinacia oleracea])

HSP 1 Score: 103.2 bits (256), Expect = 1.000e-18
Identity = 66/178 (37.08%), Postives = 96/178 (53.93%), Query Frame = 1

		  
Query: 151 GCIPGQLVIVGPNTEYVDLYGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSE 210
           GC   +L+IVGPN E+VD YGR+++  YG   YPFTRE L+   V  L+EL LESL    
Sbjct: 309 GCREDRLIIVGPNGEFVDPYGREVMNSYGCDYYPFTREALVQRKVNNLKELKLESLFV-- 368

Query: 211 SCNYVLKDGFTQINVASLQPRDILLYFGS-EDGSLIKSLQNLYSEVKLE--NPNFEVIYV 270
            CN    D F  + V  LQ ++IL++  S     L   L   Y  +K +  + +FEV++V
Sbjct: 369 HCN----DTFLHL-VQELQGKNILVFLDSLSQFELSLELNRWYQNMKKQESSSSFEVVFV 428

Query: 271 ----RRNNTSNYCNNMDIGLPCLVRPFEADHSSSLGKKLFPHVVPVDTFVRFGNDGHL 322
               R  N  +  +++   +P LV PF+ DHS+ + KKLF      +  V F  +G +
Sbjct: 429 RLYRRHVNIVDTDSSLSESMPWLVCPFDPDHSTFVEKKLFGERGVSNALVGFDQNGRI 479

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BLAST of Spo02572.1 vs. NCBI nr
Match: gi|870844380|gb|KMS97368.1| (hypothetical protein BVRB_6g155680 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 90.9 bits (224), Expect = 5.200e-15
Identity = 62/184 (33.70%), Postives = 103/184 (55.98%), Query Frame = 1

		  
Query: 167 VDLYGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYVLKDGFTQINVA 226
           +D  G+ ++ + G  AYPF R+ L+   +  + ELTLE+LL  ++   VLKD   QI VA
Sbjct: 480 IDRCGKKMISQCGIDAYPFIRKYLVERELNRVSELTLETLLVYKTRTSVLKDN-KQIPVA 539

Query: 227 SLQPRDILLYFGS---EDGSLIKSLQNLYSEVKLENPNFEVIYVRRN-------NTSNYC 286
            L+  +ILL+F S    D    + +   Y ++K + P FEV+ V ++       + + Y 
Sbjct: 540 DLEGMNILLWFSSLSTADLPFFEKVFIWYRDMKEKIPGFEVVLVLKDKPDVTDEDFAQYE 599

Query: 287 NN-MDIGLPCLVRPFEADHSSSLGKKLFPHVVPVDTFVRFGNDGHLGAIVYVRMSFLCLN 340
           ++ +  G+P LV PF+ADHS+ + K+L+P+      FV FG DG L ++    +  + +N
Sbjct: 600 DSVLSAGMPWLVCPFDADHSAFVKKELYPNY-----FVEFGKDGRLRSLRADYLLDIDVN 657

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BLAST of Spo02572.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RS07_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_034910 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 9.500e-149
Identity = 279/335 (83.28%), Postives = 284/335 (84.78%), Query Frame = 1

		  
Query: 26  FWPLKLKDPFENLSRFQE-----NVRIRCECFLVDGNSIALFSGEPDFEMGERVSASRLC 85
           F P  L  PF++  R         VRIRCECFLVDGNSIALFSGEPDFEMGERVSASRLC
Sbjct: 182 FPPSCLVVPFDDPKRSDYICCYLEVRIRCECFLVDGNSIALFSGEPDFEMGERVSASRLC 241

Query: 86  SNYSAKDLEIISLPKITRLRSIINNTVVRRINEEGVQEEMS--FLRLNEKKVV------- 145
           SNYSAKDLEIISLPKITRLRSIINNTVVRRINEEGVQEEMS   L  NEKKVV       
Sbjct: 242 SNYSAKDLEIISLPKITRLRSIINNTVVRRINEEGVQEEMSFLRL--NEKKVVGLYLWTE 301

Query: 146 ----------------------DILVADALQHHMQQTWEHCGCIPGQLVIVGPNTEYVDL 205
                                 DILVADALQHHMQQTWEHCGCIPGQLVIVGPNTEYVDL
Sbjct: 302 GIRCITDESFIDTLDMVNKQCRDILVADALQHHMQQTWEHCGCIPGQLVIVGPNTEYVDL 361

Query: 206 YGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYVLKDGFTQINVASLQ 265
           YGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYVLKDGFTQINVASLQ
Sbjct: 362 YGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYVLKDGFTQINVASLQ 421

Query: 266 PRDILLYFGSEDGSLIKSLQNLYSEVKLENPNFEVIYVRRNNTSNYCNNMDIGLPCLVRP 325
           PRDILLYFGSEDGSLIKSLQNLYSEVKLENPNFEVIYVRRNNTSNYCNNMDIGLPCLVRP
Sbjct: 422 PRDILLYFGSEDGSLIKSLQNLYSEVKLENPNFEVIYVRRNNTSNYCNNMDIGLPCLVRP 481

[Close]

BLAST of Spo02572.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B7S6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_004480 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 9.500e-24
Identity = 66/172 (38.37%), Postives = 110/172 (63.95%), Query Frame = 1

		  
Query: 156 QLVIVGPNTEYVDLYGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYV 215
           QL+I      ++D+YG +++  +G  AYPF+RE L+   +   +E+TLE+LL S+S +Y+
Sbjct: 565 QLIIFRAQDAHIDIYGAEVMITFGIDAYPFSREELVQRELNKFKEVTLETLLVSKSRDYL 624

Query: 216 LKDGFTQINVASLQPRDILLYFGSEDGSLIKSLQNL---YSEVKLENPNFEVIYVRRNNT 275
           LK G   I VA L+ ++IL++  S   + I     L   Y E + +NP+FEV++VR++++
Sbjct: 625 LKGG-ANIPVAHLRGKNILVWISSLSVNCIPFYHKLFLWYKENQAKNPDFEVVFVRKHSS 684

Query: 276 SNYCNNMDIG--LPCLVRPFEADHSSSLGKKLFPHV-VPVDTFVRFGNDGHL 322
               +++ +   +P LV PF+ADHSSS+ +KLFP++ +  D  V+FG DG L
Sbjct: 685 DPMDDDLTLSDVMPWLVCPFDADHSSSVQEKLFPNMRLNDDDLVQFGTDGLL 735

[Close]

BLAST of Spo02572.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B3T9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_004500 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.400e-22
Identity = 65/173 (37.57%), Postives = 107/173 (61.85%), Query Frame = 1

		  
Query: 156 QLVIVGPNTEYVDLYGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYV 215
           QL+I      ++D+YG +++  +G  AYPF+RE L+   +   +E+TLE+LL S+S +Y+
Sbjct: 565 QLIIFRAQDAHIDIYGAEVMSTFGIDAYPFSREELVQRELNKFKEVTLETLLISKSRDYL 624

Query: 216 LKDGFTQINVASLQPRDILLYFGSEDGSLIKSLQNL---YSEVKLENPNFEVIYVRRNNT 275
           LK G   I VA L+ ++IL++  S   + I     L   Y E +  NP+FEV+ VR++ +
Sbjct: 625 LKGG-ANIPVAHLRGKNILVWISSLSVNCIPFYHELLLWYKENQANNPDFEVVCVRKHYS 684

Query: 276 SNYCNNMDIG--LPCLVRPFEADHSSSLGKKLFPH--VVPVDTFVRFGNDGHL 322
               +++ +   +P LV PF+ADHSSS+ +KLFP+  ++  +  V+FG DG L
Sbjct: 685 DAMDDDLTLSDVMPWLVCPFDADHSSSVQEKLFPNMRMINDNDLVQFGTDGLL 736

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BLAST of Spo02572.1 vs. UniProtKB/TrEMBL
Match: A0A0K9REK8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_081260 PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 7.000e-19
Identity = 66/178 (37.08%), Postives = 96/178 (53.93%), Query Frame = 1

		  
Query: 151 GCIPGQLVIVGPNTEYVDLYGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSE 210
           GC   +L+IVGPN E+VD YGR+++  YG   YPFTRE L+   V  L+EL LESL    
Sbjct: 309 GCREDRLIIVGPNGEFVDPYGREVMNSYGCDYYPFTREALVQRKVNNLKELKLESLFV-- 368

Query: 211 SCNYVLKDGFTQINVASLQPRDILLYFGS-EDGSLIKSLQNLYSEVKLE--NPNFEVIYV 270
            CN    D F  + V  LQ ++IL++  S     L   L   Y  +K +  + +FEV++V
Sbjct: 369 HCN----DTFLHL-VQELQGKNILVFLDSLSQFELSLELNRWYQNMKKQESSSSFEVVFV 428

Query: 271 ----RRNNTSNYCNNMDIGLPCLVRPFEADHSSSLGKKLFPHVVPVDTFVRFGNDGHL 322
               R  N  +  +++   +P LV PF+ DHS+ + KKLF      +  V F  +G +
Sbjct: 429 RLYRRHVNIVDTDSSLSESMPWLVCPFDPDHSTFVEKKLFGERGVSNALVGFDQNGRI 479

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BLAST of Spo02572.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BBH8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g155680 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 3.600e-15
Identity = 62/184 (33.70%), Postives = 103/184 (55.98%), Query Frame = 1

		  
Query: 167 VDLYGRDILGKYGSVAYPFTREGLISNGVKLLRELTLESLLTSESCNYVLKDGFTQINVA 226
           +D  G+ ++ + G  AYPF R+ L+   +  + ELTLE+LL  ++   VLKD   QI VA
Sbjct: 480 IDRCGKKMISQCGIDAYPFIRKYLVERELNRVSELTLETLLVYKTRTSVLKDN-KQIPVA 539

Query: 227 SLQPRDILLYFGS---EDGSLIKSLQNLYSEVKLENPNFEVIYVRRN-------NTSNYC 286
            L+  +ILL+F S    D    + +   Y ++K + P FEV+ V ++       + + Y 
Sbjct: 540 DLEGMNILLWFSSLSTADLPFFEKVFIWYRDMKEKIPGFEVVLVLKDKPDVTDEDFAQYE 599

Query: 287 NN-MDIGLPCLVRPFEADHSSSLGKKLFPHVVPVDTFVRFGNDGHLGAIVYVRMSFLCLN 340
           ++ +  G+P LV PF+ADHS+ + K+L+P+      FV FG DG L ++    +  + +N
Sbjct: 600 DSVLSAGMPWLVCPFDADHSAFVKKELYPNY-----FVEFGKDGRLRSLRADYLLDIDVN 657

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BLAST of Spo02572.1 vs. ExPASy Swiss-Prot
Match: NRX3_ARATH (Probable nucleoredoxin 3 OS=Arabidopsis thaliana GN=At4g31240 PE=2 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.600e-6
Identity = 52/187 (27.81%), Postives = 82/187 (43.85%), Query Frame = 1

		  
Query: 138 ALQHHMQQTWEHCGCIPGQLVIVGPN--TEYVDLYG------------------RDILG- 197
           +  H M   +EH  C+P   V    +   +  D YG                   D++G 
Sbjct: 85  SFDHDMTSFYEHFWCMPWLAVPFNLSLLNKLRDKYGISRIPSLVPLYSDEISVAEDVIGL 144

Query: 198 --KYGSVAYPFTREG-----LISNGVKLLRELTLESLLTSESCNYVLKDGFTQINVASLQ 257
              YGS A+PFT++       I +  +L  +L  E LLT ES NYV+    +++ V+ L 
Sbjct: 145 IEDYGSEAFPFTKKRKEELKAIDDSKRLGGQL--EKLLTHESRNYVVARNGSKVLVSKLV 204

Query: 258 PRDILLYFGSE----DGSLIKSLQNLYSEV-KLENPNFEVIYVRRNNTSNYCNNMDIGLP 292
            + I LYFG+       S    L ++Y+E+   +  +FEVI +  +  S   N     +P
Sbjct: 205 GKTIGLYFGAHWCPPFRSFTSQLVDVYNELATTDKGSFEVILISTDRDSREFNINMTNMP 264

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BLAST of Spo02572.1 vs. TAIR (Arabidopsis)
Match: AT4G31240.1 (protein kinase C-like zinc finger protein)

HSP 1 Score: 54.7 bits (130), Expect = 1.500e-7
Identity = 52/187 (27.81%), Postives = 82/187 (43.85%), Query Frame = 1

		  
Query: 138 ALQHHMQQTWEHCGCIPGQLVIVGPN--TEYVDLYG------------------RDILG- 197
           +  H M   +EH  C+P   V    +   +  D YG                   D++G 
Sbjct: 85  SFDHDMTSFYEHFWCMPWLAVPFNLSLLNKLRDKYGISRIPSLVPLYSDEISVAEDVIGL 144

Query: 198 --KYGSVAYPFTREG-----LISNGVKLLRELTLESLLTSESCNYVLKDGFTQINVASLQ 257
              YGS A+PFT++       I +  +L  +L  E LLT ES NYV+    +++ V+ L 
Sbjct: 145 IEDYGSEAFPFTKKRKEELKAIDDSKRLGGQL--EKLLTHESRNYVVARNGSKVLVSKLV 204

Query: 258 PRDILLYFGSE----DGSLIKSLQNLYSEV-KLENPNFEVIYVRRNNTSNYCNNMDIGLP 292
            + I LYFG+       S    L ++Y+E+   +  +FEVI +  +  S   N     +P
Sbjct: 205 GKTIGLYFGAHWCPPFRSFTSQLVDVYNELATTDKGSFEVILISTDRDSREFNINMTNMP 264

The following BLAST results are available for this feature:

BLAST of Spo02572.1 vs. NCBI nr
BLAST of Spo02572.1 vs. UniProtKB/TrEMBL
BLAST of Spo02572.1 vs. ExPASy Swiss-Prot
BLAST of Spo02572.1 vs. TAIR (Arabidopsis)

BLAST of Spo02572.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902231640\|gb\|KNA22336.1\|	1.4e-148	83.2	hypothetical protein SOVF_0349...	[more]
gi\|731373910\|ref\|XP_010666792.1\|	1.4e-23	38.3	PREDICTED: uncharacterized pro...	[more]
gi\|870842428\|gb\|KMS95849.1\|	2.0e-22	37.5	hypothetical protein BVRB_0045...	[more]
gi\|902213548\|gb\|KNA17287.1\|	1.0e-18	37.0	hypothetical protein SOVF_0812...	[more]
gi\|870844380\|gb\|KMS97368.1\|	5.2e-15	33.7	hypothetical protein BVRB_6g15...	[more]

BLAST of Spo02572.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9RS07_SPIOL	9.5e-149	83.2	Uncharacterized protein OS=Spi...	[more]
A0A0J8B7S6_BETVU	9.5e-24	38.3	Uncharacterized protein OS=Bet...	[more]
A0A0J8B3T9_BETVU	1.4e-22	37.5	Uncharacterized protein OS=Bet...	[more]
A0A0K9REK8_SPIOL	7.0e-19	37.0	Uncharacterized protein OS=Spi...	[more]
A0A0J8BBH8_BETVU	3.6e-15	33.7	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo02572.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1

Position :

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Match Name	E-value	Identity	Description
NRX3_ARATH	2.6e-6	27.8	Probable nucleoredoxin 3 OS=Ar...	[more]

BLAST of Spo02572.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1

Position :

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x 1


Match Name	E-value	Identity	Description
AT4G31240.1	1.5e-7	27.8	protein kinase C-like zinc fin...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016102	diterpenoid biosynthetic process
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0008152	metabolic process
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0016707	gibberellin 3-beta-dioxygenase activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005516	calmodulin binding
molecular_function	GO:0008568	microtubule-severing ATPase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo14826	0.72	Barchart \| Table
Spo19609	0.71	Barchart \| Table
Spo14424	0.69	Barchart \| Table
Spo23930	0.69	Barchart \| Table
Spo08382	0.69	Barchart \| Table
Spo01660	0.68	Barchart \| Table
Spo23489	0.68	Barchart \| Table
Spo08403	0.67	Barchart \| Table
Spo10966	0.67	Barchart \| Table
Spo04985	0.67	Barchart \| Table
Spo01344	0.66	Barchart \| Table
Spo02749	0.66	Barchart \| Table
Spo03285	0.66	Barchart \| Table
Spo10215	0.66	Barchart \| Table
Spo12543	0.66	Barchart \| Table
Spo14240	0.66	Barchart \| Table
Spo17186	0.66	Barchart \| Table
Spo23096	0.66	Barchart \| Table
Spo24018	0.66	Barchart \| Table
Spo26990	0.65	Barchart \| Table
Spo24148	0.65	Barchart \| Table
Spo13344	0.65	Barchart \| Table