Spo02512 (gene)

Overview
NameSpo02512
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPlastid transcriptionally active7
Locationchr3 : 6099948 .. 6103007 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CACAATATTGAAAAAACTTGGAATTGATATAATCCAAACAGACTTGATTCAAACTACACCTAAAATTAACAAAAGTCGATTGCCAATTTGCCACCACTCGTCTCACCACCAAAATATGATATGTATCGGAATCAACTCAATTTGACTCATACCTTTACCTGGATAAACTGGGGAAGTGGGGATATTGAGGAAATTGAAAATTGAGGAAATTGGGGATAAACCCATAAACTATTACACTCCTATCTGGTGTTGAAATATCAAAACCCCACAAAAAAAACACCATAACCATAACCATAACCATGTCTTTATCTCTATCTTCTCTCCCCTTCAATTCATTACTTCCACTCTCTTCTTCCACAGTAAGGTCCTCTCTCTCTCTCTTTATATCTCATTCAATTGTGCTTAATTTTATGTCCATTATCACCATTTATGTCAACAAAATACTGAATTATGTTGTTCAAGAAATTGAAAAAATCTCTTAATTTATGCTTAATTGTGTAGAAATTTGAAGCGGGGCCTATCATTTTGAGGCCTTTAGGGTTTTCTATCAGGTCTCAGGTAAGTGGAAATCCTCAATTTCCTTTTTTAAAATGGAATTTTGATGAACTGGGTTTTCTTATATTTTGTCTAATTTAATTTGGGGGTTTTCTACAAATTGTAGGCCAAACCGAAATCCCGAAGTCCTGTACAAAATGGTCGGCAAGTGTGGCGGCGTAGAAAATTGGTATGTTGTGTGGTTTTTACGACTTTGATTTCATGATTTTTGTTCTTAATTTCTGGGCATTTGAAATTGAAGATAAAACTGTAATTTCGATTTGGTATAATATAATTTTAATAAGTTCAATGAATATTATGGAAGTATTTGGGTGATATTATTGTTTGAGCCAGTGTTCTAGCTTGTACTCCTTAGTTCAGATCACATTCAAATCAATGTGAAGCTTTGAAATTTGAACTACTCACTCTGTCCGAATTTAGTTGCCGCGTTATTAGTTCAAAAGTTAATATCAAATGCTTATGTTTCACATTTTAGCTTTCAGTTAGCTGATAAGTTGCTTTTCTTTCATTAATTTGACCTACCTATTCTGCTGAACTCATCTTATTAATTCTGATTAATCTGGCATCTTTCTTCCAATATAATCAAAACTCACTTGGCTATTTTGAAGGGGTTACTTCTGTTTTTGGTATGTTCTGAAGTGATTGAAGGCTGTGTTTGGTTTGTGAGAAGACCTATTTATAATTTTGTTGGGATGGAATTCCGAGGGTGGAAAAGAATTTCATTACTTGGAGAAAGAATAGCCAACTTAAAGAAAATTGATGTTAGAAAGCTGATTTCTGTTTAGCCAAGTTTGCCAAAAACAACATTTTACAACCCATTTTTTGCGAGAAACAACCTTTTAAAAAAAAATTGCGATGAAAGACCTTAAAGTAAAAAAAAAAAATTGCGAGAGACAACCATTTTGCCTTTTCTGGCGTTGACTACTCATTTCCGGCCTTTGACTTGCCGGTTTTGCTAACTTCACCCCTTTCTGTTTATATGGAAGTATATTTTCTAGAGAAAAGGAAATTCATTTCAAGCTTTCAAGTATGTCCCTCTCTAGTAAACATAGCCTAACGTCGAATGACATGTTGTCAGATGCAAGTTCAAGTTTTGGATTGACAGTCCAATTTTATTTAACCAATTTGACAGGCCAAGTGAGTGATAATTAGGGTTATGTTTCATTCTGAAAGTTTAAGATGATAAGAAAGATGTTGTCATCTTTAGCGTTACTCTACTCAGATTTACCTACATGAGAGTTGAAATTTATATGTGCTTCTTTATATGGCATTCATCTTATAGCCCTCCTCTGCTAGACTAGATTGCAATTGCAATAATTGGCAGAACAGTGCATGTTTCTGTATGCCTTTCTTTTCAAAAGAATGATGTTAAATTCCTGCAATTAAGCAGTTGAAGTTAAATCCGTTTATATATGTCCACTATCATACCAAACATGGGATAGGGATAAAAGTAATGAATTCCCCATGTTAAATTCCCTTACCTTGTCTCGATTTTTATCCCTATCCCTATCTCATACCAAACGAACCGTGTATGATTACCGTTGTTCTGTAGTTTCAGTTTTAGGACCAGTAAATCTATCTAAGCACAAAATTAGTATTTACTCTTCGAACCTAGGGTTTTGCAGTTCCAAATGCTAGGGTAAGAGTTAGACCTAATTCATAAGCCTTAATCTGGATGTTGATGACATTGTTGTTTCCTTTTATGAAGAGCAAGAAAGATGTATTTATGGAAGCCAAACTAGAGAGGGTCCCTTTCCTGGAGGAGCAAATGAGGAAGGTTAATGAAGGTGGAGGGGTGATGGCAGGGGATATTGACCGGCTAATGAAATCAGAGGACAACCGTTTTGCATTTGTGAATGAAATAGCAGCCGAGGCCACAGCATATGTTAACAACAACCGAGATGAGTATGGCCACAAAAAGGCTATCCATCACGTGCTGAGTAACCGTATGAATGATGCTGGGTTTGCTCGTCCTGAAGCTTACTTGGAGACTGAACCGTTTAGCCCTGGTCCTACTTACCTCAAGGAAAACTTTTATTAAGGCAGAGTTCGATTCTTTCAATTTTAGAATCTTGTGGATTAGTTCTTAGTGTTGTTTACCAGTTAGGTTGTATCATTCTTATCTGTTTGAATTTAAATGAATAAATCTTGATGGAACAACTTAATGTTGAGTGATATAAATTGCATTGGTGATGATAGTTGATGATAATTTGGATTTTGGCCTATTGGCAAAAACTTACTGTCCAACACGCCTATTTTGTGAAAAACTTGCATGATTTTGGTCCAAAACGAAGTGTACAAGTGTCCATGTCCATGTCCAAGTGTCGAGGATCTGACAATGATATTTGAGGTAAAATGAAGAGTTTAGATAACAGAGGTACTATTACAGGTTGGGATTGTTTGTGACGGCGACAATGTAGATAATGTGTATGCAAATGCCAGCAGGGAAAAGTACTTGTAACACTTGGGAGAGATTGAGAGTTAAGACGTGCTCTGAAAATCGGC

mRNA sequence

CACAATATTGAAAAAACTTGGAATTGATATAATCCAAACAGACTTGATTCAAACTACACCTAAAATTAACAAAAGTCGATTGCCAATTTGCCACCACTCGTCTCACCACCAAAATATGATATGTATCGGAATCAACTCAATTTGACTCATACCTTTACCTGGATAAACTGGGGAAGTGGGGATATTGAGGAAATTGAAAATTGAGGAAATTGGGGATAAACCCATAAACTATTACACTCCTATCTGGTGTTGAAATATCAAAACCCCACAAAAAAAACACCATAACCATAACCATAACCATGTCTTTATCTCTATCTTCTCTCCCCTTCAATTCATTACTTCCACTCTCTTCTTCCACAAAATTTGAAGCGGGGCCTATCATTTTGAGGCCTTTAGGGTTTTCTATCAGGTCTCAGGCCAAACCGAAATCCCGAAGTCCTGTACAAAATGGTCGGCAAGTGTGGCGGCGTAGAAAATTGAGCAAGAAAGATGTATTTATGGAAGCCAAACTAGAGAGGGTCCCTTTCCTGGAGGAGCAAATGAGGAAGGTTAATGAAGGTGGAGGGGTGATGGCAGGGGATATTGACCGGCTAATGAAATCAGAGGACAACCGTTTTGCATTTGTGAATGAAATAGCAGCCGAGGCCACAGCATATGTTAACAACAACCGAGATGAGTATGGCCACAAAAAGGCTATCCATCACGTGCTGAGTAACCGTATGAATGATGCTGGGTTTGCTCGTCCTGAAGCTTACTTGGAGACTGAACCGTTTAGCCCTGGTCCTACTTACCTCAAGGAAAACTTTTATTAAGGCAGAGTTCGATTCTTTCAATTTTAGAATCTTGTGGATTAGTTCTTAGTGTTGTTTACCAGTTAGGTTGTATCATTCTTATCTGTTTGAATTTAAATGAATAAATCTTGATGGAACAACTTAATGTTGAGTGATATAAATTGCATTGGTGATGATAGTTGATGATAATTTGGATTTTGGCCTATTGGCAAAAACTTACTGTCCAACACGCCTATTTTGTGAAAAACTTGCATGATTTTGGTCCAAAACGAAGTGTACAAGTGTCCATGTCCATGTCCAAGTGTCGAGGATCTGACAATGATATTTGAGGTAAAATGAAGAGTTTAGATAACAGAGGTACTATTACAGGTTGGGATTGTTTGTGACGGCGACAATGTAGATAATGTGTATGCAAATGCCAGCAGGGAAAAGTACTTGTAACACTTGGGAGAGATTGAGAGTTAAGACGTGCTCTGAAAATCGGC

Coding sequence (CDS)

ATGTCTTTATCTCTATCTTCTCTCCCCTTCAATTCATTACTTCCACTCTCTTCTTCCACAAAATTTGAAGCGGGGCCTATCATTTTGAGGCCTTTAGGGTTTTCTATCAGGTCTCAGGCCAAACCGAAATCCCGAAGTCCTGTACAAAATGGTCGGCAAGTGTGGCGGCGTAGAAAATTGAGCAAGAAAGATGTATTTATGGAAGCCAAACTAGAGAGGGTCCCTTTCCTGGAGGAGCAAATGAGGAAGGTTAATGAAGGTGGAGGGGTGATGGCAGGGGATATTGACCGGCTAATGAAATCAGAGGACAACCGTTTTGCATTTGTGAATGAAATAGCAGCCGAGGCCACAGCATATGTTAACAACAACCGAGATGAGTATGGCCACAAAAAGGCTATCCATCACGTGCTGAGTAACCGTATGAATGATGCTGGGTTTGCTCGTCCTGAAGCTTACTTGGAGACTGAACCGTTTAGCCCTGGTCCTACTTACCTCAAGGAAAACTTTTATTAA

Protein sequence

MSLSLSSLPFNSLLPLSSSTKFEAGPIILRPLGFSIRSQAKPKSRSPVQNGRQVWRRRKLSKKDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYVNNNRDEYGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02512.1Spo02512.1mRNA


Homology
[Close]
BLAST of Spo02512.1 vs. NCBI nr
Match: gi|902239170|gb|KNA25477.1| (hypothetical protein SOVF_006430 isoform A [Spinacia oleracea])

HSP 1 Score: 335.1 bits (858), Expect = 7.100e-89
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 1   MSLSLSSLPFNSLLPLSSSTKFEAGPIILRPLGFSIRSQAKPKSRSPVQNGRQVWRRRKL 60
           MSLSLSSLPFNSLLPLSSSTKFEAGPIILRPLGFSIRSQAKPKSRSPVQNGRQVWRRRKL
Sbjct: 1   MSLSLSSLPFNSLLPLSSSTKFEAGPIILRPLGFSIRSQAKPKSRSPVQNGRQVWRRRKL 60

Query: 61  SKKDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYV 120
           SKKDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYV
Sbjct: 61  SKKDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYV 120

Query: 121 NNNRDEYGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY 171
           NNNRDEYGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY
Sbjct: 121 NNNRDEYGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY 170
[Close]
BLAST of Spo02512.1 vs. NCBI nr
Match: gi|731321550|ref|XP_010671412.1| (PREDICTED: uncharacterized protein LOC104888215 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 257.7 bits (657), Expect = 1.400e-65
Identity = 135/170 (79.41%), Postives = 144/170 (84.71%), Query Frame = 1 

		  

Query: 1   MSLSLSSLPFNSLLPLSSSTKFEAGPIILRPLGFSIRSQAKPKSRSPVQNGRQVWRRRKL 60
           MS S SS PF+SLLP SSS K E GPII R   FS+RSQA P+SRS  Q GRQVWRRRKL
Sbjct: 1   MSFSFSSPPFSSLLPFSSSPKIEIGPIISR---FSVRSQAPPRSRSRKQGGRQVWRRRKL 60

Query: 61  SKKDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYV 120
           +KKD FMEAKLER+PFLEEQMRKV+EGGGV+AGDIDRLMKS+DNRF FVNEIAAEATAYV
Sbjct: 61  TKKDEFMEAKLERIPFLEEQMRKVHEGGGVLAGDIDRLMKSQDNRFEFVNEIAAEATAYV 120

Query: 121 NNNRDEYGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY 171
            NNRDEYG KKAI HVLSNRMNDAGF R E YLET+PF PGPTYLK N Y
Sbjct: 121 ENNRDEYGDKKAILHVLSNRMNDAGFVRSEGYLETDPFLPGPTYLKINHY 167
[Close]
BLAST of Spo02512.1 vs. NCBI nr
Match: gi|902239171|gb|KNA25478.1| (hypothetical protein SOVF_006430 isoform B [Spinacia oleracea])

HSP 1 Score: 214.2 bits (544), Expect = 1.800e-52
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

		  

Query: 67  MEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYVNNNRDE 126
           MEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYVNNNRDE
Sbjct: 1   MEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYVNNNRDE 60

Query: 127 YGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY 171
           YGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY
Sbjct: 61  YGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY 104
[Close]
BLAST of Spo02512.1 vs. NCBI nr
Match: gi|698472092|ref|XP_009784187.1| (PREDICTED: uncharacterized protein LOC104232628 isoform X2 [Nicotiana sylvestris])

HSP 1 Score: 182.6 bits (462), Expect = 5.900e-43
Identity = 89/138 (64.49%), Postives = 111/138 (80.43%), Query Frame = 1 

		  

Query: 30  RPLGFSIRSQAKPKSRSPVQNGRQVWRRRKLSKKDVFMEAKLERVPFLEEQMRKVNEGGG 89
           R L FSIRSQ+   S++  + GR++WRRRKL+KKD  ++AK+ER+PFLEEQ+RK+ +GG 
Sbjct: 11  RRLNFSIRSQSASNSKNEGRGGRRIWRRRKLTKKDETLDAKMERIPFLEEQVRKIRDGGK 70

Query: 90  VMAGDIDRLMKSEDNRFAFVNEIAAEATAYVNNNRDEYGHKKAIHHVLSNRMNDAGFARP 149
           ++  DI RL+ +EDNRF FVNEIAAEA  YV NNRDEYG KKAI HVLSNRMNDAG  R 
Sbjct: 71  LLTMDIHRLLLNEDNRFDFVNEIAAEAKQYVENNRDEYGAKKAILHVLSNRMNDAGVYRA 130

Query: 150 EAYLETEPFSPGPTYLKE 168
           EAY+E++PF PGP YLK+
Sbjct: 131 EAYMESDPFKPGPGYLKD 148
[Close]
BLAST of Spo02512.1 vs. NCBI nr
Match: gi|698472088|ref|XP_009784186.1| (PREDICTED: uncharacterized protein LOC104232628 isoform X1 [Nicotiana sylvestris])

HSP 1 Score: 181.8 bits (460), Expect = 1.000e-42
Identity = 95/165 (57.58%), Postives = 122/165 (73.94%), Query Frame = 1 

		  

Query: 3   LSLSSLPFNSLLPLSSSTKFEAGPIILRPLGFSIRSQAKPKSRSPVQNGRQVWRRRKLSK 62
           ++ S+L F+    L +  K  A     R L FSIRSQ+   S++  + GR++WRRRKL+K
Sbjct: 1   MAASTLTFSGFSTLQTFPKIAAVENTRR-LNFSIRSQSASNSKNEGRGGRRIWRRRKLTK 60

Query: 63  KDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYVNN 122
           KD  ++AK+ER+PFLEEQ+RK+ +GG ++  DI RL+ +EDNRF FVNEIAAEA  YV N
Sbjct: 61  KDETLDAKMERIPFLEEQVRKIRDGGKLLTMDIHRLLLNEDNRFDFVNEIAAEAKQYVEN 120

Query: 123 NRDEYGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKE 168
           NRDEYG KKAI HVLSNRMNDAG  R EAY+E++PF PGP YLK+
Sbjct: 121 NRDEYGAKKAILHVLSNRMNDAGVYRAEAYMESDPFKPGPGYLKD 164
[Close]
BLAST of Spo02512.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S2W8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006430 PE=4 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 4.900e-89
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 1 

		  

Query: 1   MSLSLSSLPFNSLLPLSSSTKFEAGPIILRPLGFSIRSQAKPKSRSPVQNGRQVWRRRKL 60
           MSLSLSSLPFNSLLPLSSSTKFEAGPIILRPLGFSIRSQAKPKSRSPVQNGRQVWRRRKL
Sbjct: 1   MSLSLSSLPFNSLLPLSSSTKFEAGPIILRPLGFSIRSQAKPKSRSPVQNGRQVWRRRKL 60

Query: 61  SKKDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYV 120
           SKKDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYV
Sbjct: 61  SKKDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYV 120

Query: 121 NNNRDEYGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY 171
           NNNRDEYGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY
Sbjct: 121 NNNRDEYGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY 170
[Close]
BLAST of Spo02512.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQF2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051630 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 1.000e-65
Identity = 135/170 (79.41%), Postives = 144/170 (84.71%), Query Frame = 1 

		  

Query: 1   MSLSLSSLPFNSLLPLSSSTKFEAGPIILRPLGFSIRSQAKPKSRSPVQNGRQVWRRRKL 60
           MS S SS PF+SLLP SSS K E GPII R   FS+RSQA P+SRS  Q GRQVWRRRKL
Sbjct: 1   MSFSFSSPPFSSLLPFSSSPKIEIGPIISR---FSVRSQAPPRSRSRKQGGRQVWRRRKL 60

Query: 61  SKKDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYV 120
           +KKD FMEAKLER+PFLEEQMRKV+EGGGV+AGDIDRLMKS+DNRF FVNEIAAEATAYV
Sbjct: 61  TKKDEFMEAKLERIPFLEEQMRKVHEGGGVLAGDIDRLMKSQDNRFEFVNEIAAEATAYV 120

Query: 121 NNNRDEYGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY 171
            NNRDEYG KKAI HVLSNRMNDAGF R E YLET+PF PGPTYLK N Y
Sbjct: 121 ENNRDEYGDKKAILHVLSNRMNDAGFVRSEGYLETDPFLPGPTYLKINHY 167
[Close]
BLAST of Spo02512.1 vs. UniProtKB/TrEMBL
Match: A0A0K9S187_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_006430 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.300e-52
Identity = 104/104 (100.00%), Postives = 104/104 (100.00%), Query Frame = 1 

		  

Query: 67  MEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYVNNNRDE 126
           MEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYVNNNRDE
Sbjct: 1   MEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYVNNNRDE 60

Query: 127 YGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY 171
           YGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY
Sbjct: 61  YGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKENFY 104
[Close]
BLAST of Spo02512.1 vs. UniProtKB/TrEMBL
Match: A0A068U9R2_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00019957001 PE=4 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 9.100e-43
Identity = 91/132 (68.94%), Postives = 107/132 (81.06%), Query Frame = 1 

		  

Query: 36  IRSQAKPKSRSPVQNGRQVWRRRKLSKKDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDI 95
           IRSQ    S+S     R+VWRRRKL+KKD F+E KLERVPFLEEQ+RK+ +GG ++  DI
Sbjct: 39  IRSQRISSSKSDGPGRRRVWRRRKLTKKDEFLEPKLERVPFLEEQVRKIRDGGKLLTMDI 98

Query: 96  DRLMKSEDNRFAFVNEIAAEATAYVNNNRDEYGHKKAIHHVLSNRMNDAGFARPEAYLET 155
            RL+ SEDNRF FVNE+AAEA  YV NNRDEYG KKAI HVLSNRMNDAG +RPEAYLE+
Sbjct: 99  HRLLLSEDNRFDFVNEVAAEAKMYVENNRDEYGAKKAILHVLSNRMNDAGTSRPEAYLES 158

Query: 156 EPFSPGPTYLKE 168
           +PF+PGP YL+E
Sbjct: 159 DPFNPGPGYLRE 170
[Close]
BLAST of Spo02512.1 vs. UniProtKB/TrEMBL
Match: M1BLB3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018546 PE=4 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.000e-41
Identity = 91/165 (55.15%), Postives = 122/165 (73.94%), Query Frame = 1 

		  

Query: 3   LSLSSLPFNSLLPLSSSTKFEAGPIILRPLGFSIRSQAKPKSRSPVQNGRQVWRRRKLSK 62
           ++ S+L F+S   L +  +  A     R + FSIR+Q+   S++  +  R++WRRRKL+K
Sbjct: 1   MAASTLTFSSFSTLQTFPRIAAVENTKR-VNFSIRAQSASNSKNEGRGERRIWRRRKLTK 60

Query: 63  KDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFVNEIAAEATAYVNN 122
           KD  ++AK+ER+PFLEEQ+RK+ +GG ++  DI RL+ +EDNRF FVNEIAAEA  YV N
Sbjct: 61  KDETLDAKMERIPFLEEQVRKIRDGGKLLTMDIHRLLLNEDNRFDFVNEIAAEAKQYVEN 120

Query: 123 NRDEYGHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKE 168
           NRDEYG KKAI HVLSNRMNDAG  R EAY++++PF PGP YLK+
Sbjct: 121 NRDEYGAKKAILHVLSNRMNDAGVYRAEAYMDSDPFKPGPGYLKD 164
[Close]
BLAST of Spo02512.1 vs. ExPASy Swiss-Prot
Match: PTA7_ARATH (Protein PLASTID TRANSCRIPTIONALLY ACTIVE 7 OS=Arabidopsis thaliana GN=PTAC7 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.300e-37
Identity = 77/121 (63.64%), Postives = 95/121 (78.51%), Query Frame = 1 

		  

Query: 50  NGRQVWRRRKLSKKDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKSEDNRFAFV 109
           NGR+VWRRR L+KKD  +  K++RVPF+EEQ+RK+ E G VM  DI++L+  EDNRF FV
Sbjct: 40  NGRRVWRRRTLTKKDDMLRYKMQRVPFVEEQVRKIREVGKVMTMDIEQLLLREDNRFEFV 99

Query: 110 NEIAAEATAYVNNNRDEY-GHKKAIHHVLSNRMNDAGFARPEAYLETEPFSPGPTYLKEN 169
           N +AAEAT YV+ NRDEY G KKAI HVLSNR+ND GF RPEAY+E +P+ PGP YL E 
Sbjct: 100 NSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKPGPGYLLEY 159
[Close]
BLAST of Spo02512.1 vs. TAIR (Arabidopsis)
Match: AT5G24314.2 (plastid transcriptionally active7)

HSP 1 Score: 150.2 bits (378), Expect = 1.100e-36
Identity = 77/129 (59.69%), Postives = 95/129 (73.64%), Query Frame = 1 

		  

Query: 50  NGRQVWRRRKL--------SKKDVFMEAKLERVPFLEEQMRKVNEGGGVMAGDIDRLMKS 109
           NGR+VWRRR L        +KKD  +  K++RVPF+EEQ+RK+ E G VM  DI++L+  
Sbjct: 40  NGRRVWRRRTLVSTKLDILTKKDDMLRYKMQRVPFVEEQVRKIREVGKVMTMDIEQLLLR 99

Query: 110 EDNRFAFVNEIAAEATAYVNNNRDEY-GHKKAIHHVLSNRMNDAGFARPEAYLETEPFSP 169
           EDNRF FVN +AAEAT YV+ NRDEY G KKAI HVLSNR+ND GF RPEAY+E +P+ P
Sbjct: 100 EDNRFEFVNSVAAEATEYVDKNRDEYGGSKKAIFHVLSNRVNDLGFDRPEAYVEADPYKP 159
The following BLAST results are available for this feature:
BLAST of Spo02512.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902239170|gb|KNA25477.1|7.1e-89100.hypothetical protein SOVF_0064... [more]
gi|731321550|ref|XP_010671412.1|1.4e-6579.4PREDICTED: uncharacterized pro... [more]
gi|902239171|gb|KNA25478.1|1.8e-52100.hypothetical protein SOVF_0064... [more]
gi|698472092|ref|XP_009784187.1|5.9e-4364.4PREDICTED: uncharacterized pro... [more]
gi|698472088|ref|XP_009784186.1|1.0e-4257.5PREDICTED: uncharacterized pro... [more]
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BLAST of Spo02512.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9S2W8_SPIOL4.9e-89100.Uncharacterized protein OS=Spi... [more]
A0A0J8CQF2_BETVU1.0e-6579.4Uncharacterized protein OS=Bet... [more]
A0A0K9S187_SPIOL1.3e-52100.Uncharacterized protein OS=Spi... [more]
A0A068U9R2_COFCA9.1e-4368.9Uncharacterized protein OS=Cof... [more]
M1BLB3_SOLTU5.0e-4155.1Uncharacterized protein OS=Sol... [more]
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BLAST of Spo02512.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PTA7_ARATH1.3e-3763.6Protein PLASTID TRANSCRIPTIONA... [more]
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BLAST of Spo02512.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G24314.21.1e-3659.6plastid transcriptionally acti... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR37257FAMILY NOT NAMEDcoord: 50..170
score: 4.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008380 RNA splicing
biological_process GO:0006364 rRNA processing
biological_process GO:0019430 removal of superoxide radicals
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0009658 chloroplast organization
cellular_component GO:0009507 chloroplast
cellular_component GO:0042644 chloroplast nucleoid
cellular_component GO:0009534 chloroplast thylakoid
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0009536 plastid
molecular_function GO:0005515 protein binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004784 superoxide dismutase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo107440.75Barchart | Table
Spo044330.75Barchart | Table
Spo119510.75Barchart | Table
Spo226540.74Barchart | Table
Spo029640.73Barchart | Table
Spo271630.73Barchart | Table
Spo184780.73Barchart | Table
Spo001550.72Barchart | Table
Spo140130.72Barchart | Table
Spo246900.72Barchart | Table
Spo150150.72Barchart | Table
Spo030270.71Barchart | Table
Spo046820.71Barchart | Table
Spo231330.71Barchart | Table
Spo056800.71Barchart | Table
Spo272100.71Barchart | Table
Spo181110.70Barchart | Table
Spo085330.70Barchart | Table
Spo020010.69Barchart | Table
Spo001780.69Barchart | Table
Spo223260.69Barchart | Table
Spo241530.69Barchart | Table
Spo030740.69Barchart | Table
Spo030570.69Barchart | Table
Spo229990.69Barchart | Table
Spo091490.69Barchart | Table
Spo215310.69Barchart | Table
Spo173670.68Barchart | Table
Spo092670.68Barchart | Table
Spo222010.68Barchart | Table
Spo210710.68Barchart | Table
Spo123020.68Barchart | Table
Spo005010.68Barchart | Table
Spo149990.68Barchart | Table
Spo056070.67Barchart | Table
Spo078700.67Barchart | Table
Spo131070.67Barchart | Table
Spo233840.67Barchart | Table
Spo054840.67Barchart | Table
Spo063980.67Barchart | Table
Spo106240.67Barchart | Table
Spo089030.67Barchart | Table
Spo115190.67Barchart | Table
Spo143100.67Barchart | Table
Spo153020.66Barchart | Table
Spo019700.66Barchart | Table
Spo031950.66Barchart | Table
Spo037080.66Barchart | Table
Spo062870.66Barchart | Table
Spo064990.66Barchart | Table
Spo065940.66Barchart | Table
Spo073060.66Barchart | Table
Spo109160.66Barchart | Table
Spo129590.66Barchart | Table
Spo136260.66Barchart | Table
Spo167080.66Barchart | Table
Spo168920.66Barchart | Table
Spo215010.66Barchart | Table
Spo232830.66Barchart | Table
Spo268460.66Barchart | Table
Spo268570.66Barchart | Table
Spo272910.66Barchart | Table
Spo133740.65Barchart | Table
Spo107050.65Barchart | Table
Spo026480.65Barchart | Table
Spo300250.65Barchart | Table
Spo226660.65Barchart | Table
Spo057330.65Barchart | Table
Spo166860.65Barchart | Table
Spo239060.65Barchart | Table