Spo02595 (gene)

Overview
NameSpo02595
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionThylakoid lumenal 17.4 kDa protein
Locationchr3 : 6212114 .. 6216303 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCCATTTATTATCAAGTTTGAGGGGGAAAAGATCTTCTTATAATAAATAAAAAAAAAAGAAAAAGAAAAGAAGTTTGAGTGCCACGTAAGAAGATAAGCTGCCCAAGGAGGGAGGAAGAAGGGAGAGAGAAAAAGATAGGAAATGCAAATGATAAACATAATTTGACAAAATGGCGAGTATTGGCATTTCCATTCACCCAAATGGCATCTCCTTGAAAAATTCCTCTGTTAAACGCCATCTTTTTTCTGCTCGAAAACTTCAGTTATCTTTCCCAATCAACTGCTCTGGTACACACTCTTTCTCTCTCACTCACTCTTGTTTATCATTAACTAGAAATTTCAATGGAAATCTAAATTATTGTTGATAATGCTGTTGTTTTGTTGCTTTAATTGAACTTGAAATTCTCATCTTTAGCTCATTTGCAATTGAATTAGCATTCAAGAACAGCTTCTATAGAGGCCAATTCAATTAGTAATGACTTGTGGTGTGTTCATTTGGTTTGCGGGTAACAATACCCATCACTGATTTCTTAGTTCTTACAGATGGTTTAATTTGTGACATTTGTCATTACAAATTGCTATTTTCTGTACTTGTTTTTTTGATTGATCATAAACCATTTATCTGTAGTTCATTATTTCTAGAACAAGGGTGTTGTTGTCTATAATGGGGCGTCACAACTCACAACTCACAAGGTAGTCTTGCACATGTAATACCTAATTAATCTCATATTCCAACAGTAAAAAAGATCATTAATTTTAGACTTTTGAATTTTGATGGACTTAAATTAAGCGGTTGAATAAATTGCTTGTGAGTAGTGATAAATTAAGGGTGTCCGGGAAAAAATGGTCACATTCTCTCAATGAATAATGAAGTAATGAGTGAGGTGGGAGAAGCACCATAATGACAGAGGGCTTTTGTTTCTCTATTGCAAATTCATGTTTAAATTCTTAATTATGACGAGTTAGGGAACATGGGACAACTATGTTGAAGCGGGGAGAGTATGAAGTAACAAACAATCATTGCATACATGAATACTTGATGCATCTTACCTTAGTGGCAACCAAGCTAAGTGTCACTTGAATAATACCTCTCTTTCATGTTAAAGTAAAGTTGTTTATTTAGTCTAATCCTCCTTGATTACCTTAACCGAGGCAGGAGATTCTTTACAGATATTGAGAAACATTGAGGTTAGTTTATGTTGGTTCTTTAAAACATTTTCTAAGCAAGGTGTTGTGTTGAAATCTATTTCTTGTTATTGTCAGTTTTCTTAGGAAGAGATGTTTATTTCGAAAACTTTGTTCTGCTGTGTTCGCCAAAATGCCTACATTTTTGGAGTCACAGTTGATAATGGGGATCCTTTGACACGCTATTAGAACATGTTTGATCCCTCAACTGATCATTTTATCCCATCTTATACCGATTTAACAAATGCTTTAAATAATGCATGTGTATGCTTCTTGATGATATACCTACTCAATGTTGTATCACTGAACATAGATATTGTCCTGTCCTTGAACGAGTTGAACCTTGTTTTTCTGGTTCTGTTTCTGTTACCAAAGTTTGTGTACTGCTTGTGCTTTGTAGTTTTCTTGTTCTTCATCCTGGACTAACTCTGATGTTTAAGTCGAACTATAAATGTTGTCTTTTTGTAGCTGTTGGGAATGGATTGGAGAAAGAAAACTCGTCTCAATTCAAAGAACTTAGGAATGTTGCATTTGGCCTCCTGGCCACGTTGGCAGTCACAGCTGCCTCGCCTGTAATAGCTGCTAACCAGGTCAGGAATTTGCCGTTGTTACAGTTCAATTGCAGATTCGTCTAAAACAATTTAGAATTTCGTAATCTGTTCGCATGCTTCAAAGTTTTGTAGATACATCTACTACATCAGATTATCCATGTGAAGTGATTTACAGTTTCTTAGACATAACTAGCTGGAAAAAAAAATGCATTTCATGATGATCTACTAACCAAATAGGTTACTACCTTGTGCTAAGAAATCTCAAGTTTCATGATTGTCGTGATGAAAACCAAATCAGCTTCAAATGTGACTTATCATTGTTCACATTTGAGTTTTGACTCTGTCTACATCTCCATTCCCTAAGGGCTCAAAACGATATGCTTCCTCTATGTTCTTTAATTCTACAGTCTAGACTACATAGCTGCTGAGTGCTCACCTACTAGGTGATCTTGAACAAGTTCAAGCTGTTATATTGATTTTTTAGCTTATTTTCTTAAGCTCTACTATATAGCTATCTCTCGTCAATTTGGCAGTACTCAAAATTTCATTAAAAAAATCAGATTAGAGGCTCCGTTGTACTTTAATTCTTGATAACCATACTTGTTTTTATTCCCGTTTAAATCAAATAGCGGCTTCCTTGCCTTAGAACTTCACGTAGCTGGTCTCTTCTAGTATAGTGGGTGAACACACTAATTCTCTAAACTAACTTCTGAATTTCATGCATATTAATTCCCTTTTTAAATCTTCAACAAACAGCTCTTCTGCTTGGCCTCTCAAAATAAGCACACTTCTTATAAAAATTTATAATATTTACATTTAACATACTGCTAGTATATCTTCTCGACCTATTTCTAACCACTACATGATTCTTCCTGGCAGAGACTTCCTCCACTTTCGAACGATCCCGACCGTTGTGAGCGTGCATTCGTTGGTAACACAATTGGTCAAGCAAATGGTGTATATGACAAGCCCTTAGATCTCCGCTTTTGTGACTATACAAATGAAAAGTCTAAGCTCAAGGGGAAGTCTCTTACAGCTGCTCTCATGTCAGATGCTAAGTTTGATGGTGCTGACATGACCGAAGTTGTCATGTCCAAGGCTTATGCTGTTGGAGCTAGTTTCAAGGGTATAATACTCCTTCCCTTATTGTGATCACTGATCAGATATACTCCATCCGTCCCAAAATTATAGTCATGTTTTATTTCGGGTGTCCCAAAATTATAGTCCTGTTTCATTATTTGGACATTACTTTTCCCACTTTCTCATGCACTTTCCCACATACTTTCCCACTTTCCCATACACTATATTCCACTTTTCTTAAAACCCGTGCTTTTAGTCAAACATGACTATAATTTTGGGAAGGAGGGAGTACTTAATTTCTGAAGTCATCTTGCAGCGAACCACTTCCTTCGTCCCTAGAACTAGTTAACATCTACTTTTGCTCCGAGATTCAAAAGAGTGACAAAGTAGGGAGAGGGAAATAGATCATGGGTCTGAAAATAACTATTTCCTCTGTTTTTTTTTTATTTTACTTGCACTATTTTCCTGTTTTGGAAGTTGCGTATTATTTGCACCATTTCGTTTTATGGTATGCATTCACATGCTTTGTGGTGTGTTCACACACCAAATACCAATTTTACCCTTATACATGTTTTATATTTACCATTAATACCTAACCTTTTCTACTTAATTTGTTTGTTATCAGATGGGCATTCTTGATATTTACTTTCTTTGTTAATGTGTGTGCCCAACCTAAATGGTGCAAGTAAAAAAAAAAACGGAGGAATACTGACTTCTTTGACGGACATCGGATGATGTTAACTTGTTTTAGGGACAGAGGGAGTATTTGTTGATTAATCAAATGCTGGTGGTGTAGAATGTTATGTAAAATGTTTTTTTTTTGGCTGATCAAGGGTGATTTATATGCAGGTACTGACTTCACAAATGCAGTCATAGATCGCGTTAATTTTGGCAAGTCCGATCTAGAAGGAGCTGTGTTTAAGAATACCGTATTATCAGGGTCCACTTTCGAGGAGGCTAAACTAGACGGTGTCATATTTGAGGACACCATTATTGGTTATGTTGATCTTCAAAAGATCTGTCTTAATAAATCTATCAGTGAGGAAGGAAGAGATGTACTTGGGTGTCGATGAAGCTAATGTCCTCCTACCTATGCTCTCTCTCCCGAGAGTCTCTACCCCGTTCTCTTTTCAACAATTTTGTGTGAAGAAAACAAGTATGTTTTAGAGGTAATTCATATACTCGAATGTATATTTTGTAATTGACAGTTTATGATGATTTGTTCTGTATAATAGTGATGCACTTATCTCTGATAAAATGAAGAAGTTCACATTAATCTCCATTTCTTAATTCTTATACTGTCATTCTTTGAACAAAATGTGCACCATTTTGGTGGTTGCTAGTGTTTTTAGCACGGGTTATGTTATTTGGTAC

mRNA sequence

TCCATTTATTATCAAGTTTGAGGGGGAAAAGATCTTCTTATAATAAATAAAAAAAAAAGAAAAAGAAAAGAAGTTTGAGTGCCACGTAAGAAGATAAGCTGCCCAAGGAGGGAGGAAGAAGGGAGAGAGAAAAAGATAGGAAATGCAAATGATAAACATAATTTGACAAAATGGCGAGTATTGGCATTTCCATTCACCCAAATGGCATCTCCTTGAAAAATTCCTCTGTTAAACGCCATCTTTTTTCTGCTCGAAAACTTCAGTTATCTTTCCCAATCAACTGCTCTGCTGTTGGGAATGGATTGGAGAAAGAAAACTCGTCTCAATTCAAAGAACTTAGGAATGTTGCATTTGGCCTCCTGGCCACGTTGGCAGTCACAGCTGCCTCGCCTGTAATAGCTGCTAACCAGAGACTTCCTCCACTTTCGAACGATCCCGACCGTTGTGAGCGTGCATTCGTTGGTAACACAATTGGTCAAGCAAATGGTGTATATGACAAGCCCTTAGATCTCCGCTTTTGTGACTATACAAATGAAAAGTCTAAGCTCAAGGGGAAGTCTCTTACAGCTGCTCTCATGTCAGATGCTAAGTTTGATGGTGCTGACATGACCGAAGTTGTCATGTCCAAGGCTTATGCTGTTGGAGCTAGTTTCAAGGGTACTGACTTCACAAATGCAGTCATAGATCGCGTTAATTTTGGCAAGTCCGATCTAGAAGGAGCTGTGTTTAAGAATACCGTATTATCAGGGTCCACTTTCGAGGAGGCTAAACTAGACGGTGTCATATTTGAGGACACCATTATTGGTTATGTTGATCTTCAAAAGATCTGTCTTAATAAATCTATCAGTGAGGAAGGAAGAGATGTACTTGGGTGTCGATGAAGCTAATGTCCTCCTACCTATGCTCTCTCTCCCGAGAGTCTCTACCCCGTTCTCTTTTCAACAATTTTGTGTGAAGAAAACAAGTATGTTTTAGAGGTAATTCATATACTCGAATGTATATTTTGTAATTGACAGTTTATGATGATTTGTTCTGTATAATAGTGATGCACTTATCTCTGATAAAATGAAGAAGTTCACATTAATCTCCATTTCTTAATTCTTATACTGTCATTCTTTGAACAAAATGTGCACCATTTTGGTGGTTGCTAGTGTTTTTAGCACGGGTTATGTTATTTGGTAC

Coding sequence (CDS)

ATGGCGAGTATTGGCATTTCCATTCACCCAAATGGCATCTCCTTGAAAAATTCCTCTGTTAAACGCCATCTTTTTTCTGCTCGAAAACTTCAGTTATCTTTCCCAATCAACTGCTCTGCTGTTGGGAATGGATTGGAGAAAGAAAACTCGTCTCAATTCAAAGAACTTAGGAATGTTGCATTTGGCCTCCTGGCCACGTTGGCAGTCACAGCTGCCTCGCCTGTAATAGCTGCTAACCAGAGACTTCCTCCACTTTCGAACGATCCCGACCGTTGTGAGCGTGCATTCGTTGGTAACACAATTGGTCAAGCAAATGGTGTATATGACAAGCCCTTAGATCTCCGCTTTTGTGACTATACAAATGAAAAGTCTAAGCTCAAGGGGAAGTCTCTTACAGCTGCTCTCATGTCAGATGCTAAGTTTGATGGTGCTGACATGACCGAAGTTGTCATGTCCAAGGCTTATGCTGTTGGAGCTAGTTTCAAGGGTACTGACTTCACAAATGCAGTCATAGATCGCGTTAATTTTGGCAAGTCCGATCTAGAAGGAGCTGTGTTTAAGAATACCGTATTATCAGGGTCCACTTTCGAGGAGGCTAAACTAGACGGTGTCATATTTGAGGACACCATTATTGGTTATGTTGATCTTCAAAAGATCTGTCTTAATAAATCTATCAGTGAGGAAGGAAGAGATGTACTTGGGTGTCGATGA

Protein sequence

MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVAFGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYTNEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSDLEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02595.1Spo02595.1mRNA


Homology
[Close]
BLAST of Spo02595.1 vs. NCBI nr
Match: gi|902224199|gb|KNA19719.1| (hypothetical protein SOVF_059040 [Spinacia oleracea])

HSP 1 Score: 461.5 bits (1186), Expect = 9.100e-127
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 1 

		  

Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60
           MASIGISIHPNGISLKNSSVK HLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA
Sbjct: 1   MASIGISIHPNGISLKNSSVKCHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60

Query: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120
           FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT
Sbjct: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120

Query: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180
           NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD
Sbjct: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180

Query: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR
Sbjct: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 236
[Close]
BLAST of Spo02595.1 vs. NCBI nr
Match: gi|731321534|ref|XP_010671403.1| (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 405.6 bits (1041), Expect = 5.900e-110
Identity = 200/236 (84.75%), Postives = 220/236 (93.22%), Query Frame = 1 

		  

Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60
           MASIGISIHPNG+SL+NSS KRH F  +KL LSFPINCS +GN  EKENSSQFK LRNVA
Sbjct: 1   MASIGISIHPNGLSLRNSSTKRHCFPPQKLHLSFPINCSVIGNEFEKENSSQFKGLRNVA 60

Query: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120
           FGLLAT AVTAASPVIAA QRLPPLS +P+RCERAFVGNTIGQANGVYDKPLDLRFCDY+
Sbjct: 61  FGLLATWAVTAASPVIAAGQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRFCDYS 120

Query: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180
           N+KS LKGKSL+AAL+SDAKFDGADMTEV+MSKAYAVGASFKGTDFTNAV+DRVNFGK++
Sbjct: 121 NDKSNLKGKSLSAALVSDAKFDGADMTEVIMSKAYAVGASFKGTDFTNAVLDRVNFGKAN 180

Query: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           L+GAVFKNTVLSGSTFEEA+L+ V+FEDTIIGYVDLQK+CLNKSIS+EGR  LGCR
Sbjct: 181 LQGAVFKNTVLSGSTFEEAQLEDVVFEDTIIGYVDLQKLCLNKSISDEGRAELGCR 236
[Close]
BLAST of Spo02595.1 vs. NCBI nr
Match: gi|302143933|emb|CBI23038.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 340.5 bits (872), Expect = 2.300e-90
Identity = 171/225 (76.00%), Postives = 198/225 (88.00%), Query Frame = 1 

		  

Query: 13  ISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLE-KENSSQFKELRNVAFGLLATLAVTA 72
           +SL++SS KRH FS  +L   F I+CSA  +  E K +SSQFKEL+NVAFG+LA  AVTA
Sbjct: 8   LSLQHSSPKRHRFSVPELHSPFRISCSASWDSPELKASSSQFKELKNVAFGILAVCAVTA 67

Query: 73  ASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYTNEKSKLKGKSL 132
           ASPVIAA+QRLPPLS +P+RCERAFVGNTIGQANGVYDKP+DLRFCDYTNEKS LKGKSL
Sbjct: 68  ASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSL 127

Query: 133 TAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSDLEGAVFKNTVL 192
            AALMS+AKFDGADM+EVVMSKAYAVGASFKG DFTNAV+DRVNFGK++L+GAVFKNTVL
Sbjct: 128 AAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFGKANLQGAVFKNTVL 187

Query: 193 SGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           SGSTF++A+L+  +FEDTIIGY+DLQKIC N SI+ +GR  LGCR
Sbjct: 188 SGSTFDQAQLEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR 232
[Close]
BLAST of Spo02595.1 vs. NCBI nr
Match: gi|359490718|ref|XP_002275994.2| (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Vitis vinifera])

HSP 1 Score: 340.5 bits (872), Expect = 2.300e-90
Identity = 171/225 (76.00%), Postives = 198/225 (88.00%), Query Frame = 1 

		  

Query: 13  ISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLE-KENSSQFKELRNVAFGLLATLAVTA 72
           +SL++SS KRH FS  +L   F I+CSA  +  E K +SSQFKEL+NVAFG+LA  AVTA
Sbjct: 20  LSLQHSSPKRHRFSVPELHSPFRISCSASWDSPELKASSSQFKELKNVAFGILAVCAVTA 79

Query: 73  ASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYTNEKSKLKGKSL 132
           ASPVIAA+QRLPPLS +P+RCERAFVGNTIGQANGVYDKP+DLRFCDYTNEKS LKGKSL
Sbjct: 80  ASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSL 139

Query: 133 TAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSDLEGAVFKNTVL 192
            AALMS+AKFDGADM+EVVMSKAYAVGASFKG DFTNAV+DRVNFGK++L+GAVFKNTVL
Sbjct: 140 AAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFGKANLQGAVFKNTVL 199

Query: 193 SGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           SGSTF++A+L+  +FEDTIIGY+DLQKIC N SI+ +GR  LGCR
Sbjct: 200 SGSTFDQAQLEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR 244
[Close]
BLAST of Spo02595.1 vs. NCBI nr
Match: gi|568877960|ref|XP_006491985.1| (PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Citrus sinensis])

HSP 1 Score: 326.2 bits (835), Expect = 4.600e-86
Identity = 171/238 (71.85%), Postives = 190/238 (79.83%), Query Frame = 1 

		  

Query: 1   MASIGISIHPNGISLKNSSVKRHLFS-ARKLQLSFPINCSAVGNGLE-KENSSQFKELRN 60
           MA+I + +  N  S ++ S  RH F   R       I CSA  N  E KE+ S  KEL+ 
Sbjct: 1   MATISVPLSHNTSSRQHLSTIRHRFHFPRSSHSPLTIACSARRNSSESKESFSHLKELKG 60

Query: 61  VAFGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCD 120
           VA G LA  AVTAASPVIAANQRLPPLS +PDRCERAFVGNTIGQANGVYDKP+DLRFCD
Sbjct: 61  VACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120

Query: 121 YTNEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGK 180
           YTNEKS LKGKSL AALMSDAKFDGADM+EVVMSKAYAVGASFKG DF+NAV+DRVNFGK
Sbjct: 121 YTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK 180

Query: 181 SDLEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           + LEGAVFKNTVLSGSTF EA+L   +FEDTIIGYVDLQK+C N ++S +GRD LGCR
Sbjct: 181 AHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYVDLQKLCTNTTLSPDGRDELGCR 238
[Close]
BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RLC7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_059040 PE=4 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 6.300e-127
Identity = 235/236 (99.58%), Postives = 235/236 (99.58%), Query Frame = 1 

		  

Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60
           MASIGISIHPNGISLKNSSVK HLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA
Sbjct: 1   MASIGISIHPNGISLKNSSVKCHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60

Query: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120
           FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT
Sbjct: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120

Query: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180
           NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD
Sbjct: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180

Query: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR
Sbjct: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 236
[Close]
BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FJB3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051540 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 4.100e-110
Identity = 200/236 (84.75%), Postives = 220/236 (93.22%), Query Frame = 1 

		  

Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60
           MASIGISIHPNG+SL+NSS KRH F  +KL LSFPINCS +GN  EKENSSQFK LRNVA
Sbjct: 1   MASIGISIHPNGLSLRNSSTKRHCFPPQKLHLSFPINCSVIGNEFEKENSSQFKGLRNVA 60

Query: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120
           FGLLAT AVTAASPVIAA QRLPPLS +P+RCERAFVGNTIGQANGVYDKPLDLRFCDY+
Sbjct: 61  FGLLATWAVTAASPVIAAGQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRFCDYS 120

Query: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180
           N+KS LKGKSL+AAL+SDAKFDGADMTEV+MSKAYAVGASFKGTDFTNAV+DRVNFGK++
Sbjct: 121 NDKSNLKGKSLSAALVSDAKFDGADMTEVIMSKAYAVGASFKGTDFTNAVLDRVNFGKAN 180

Query: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           L+GAVFKNTVLSGSTFEEA+L+ V+FEDTIIGYVDLQK+CLNKSIS+EGR  LGCR
Sbjct: 181 LQGAVFKNTVLSGSTFEEAQLEDVVFEDTIIGYVDLQKLCLNKSISDEGRAELGCR 236
[Close]
BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
Match: E0CV77_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g01540 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.600e-90
Identity = 171/225 (76.00%), Postives = 198/225 (88.00%), Query Frame = 1 

		  

Query: 13  ISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLE-KENSSQFKELRNVAFGLLATLAVTA 72
           +SL++SS KRH FS  +L   F I+CSA  +  E K +SSQFKEL+NVAFG+LA  AVTA
Sbjct: 8   LSLQHSSPKRHRFSVPELHSPFRISCSASWDSPELKASSSQFKELKNVAFGILAVCAVTA 67

Query: 73  ASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYTNEKSKLKGKSL 132
           ASPVIAA+QRLPPLS +P+RCERAFVGNTIGQANGVYDKP+DLRFCDYTNEKS LKGKSL
Sbjct: 68  ASPVIAASQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPIDLRFCDYTNEKSNLKGKSL 127

Query: 133 TAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSDLEGAVFKNTVL 192
            AALMS+AKFDGADM+EVVMSKAYAVGASFKG DFTNAV+DRVNFGK++L+GAVFKNTVL
Sbjct: 128 AAALMSEAKFDGADMSEVVMSKAYAVGASFKGVDFTNAVLDRVNFGKANLQGAVFKNTVL 187

Query: 193 SGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           SGSTF++A+L+  +FEDTIIGY+DLQKIC N SI+ +GR  LGCR
Sbjct: 188 SGSTFDQAQLEDAVFEDTIIGYIDLQKICTNTSINADGRAELGCR 232
[Close]
BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
Match: V4TLV7_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10021983mg PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 9.300e-86
Identity = 169/238 (71.01%), Postives = 190/238 (79.83%), Query Frame = 1 

		  

Query: 1   MASIGISIHPNGISLKNSSVKRHLFS-ARKLQLSFPINCSAVGNGLE-KENSSQFKELRN 60
           MA+I + +  N  SL++ S  RH F   R       + CSA  N  E KE+ S  KEL+ 
Sbjct: 1   MATISVPLSHNTSSLQHLSTIRHRFHFPRSSHSPLTVACSARRNSSEPKESFSHLKELKG 60

Query: 61  VAFGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCD 120
           VA G LA  AVTAASPVIAANQRLPPLS +PDRCERAFVGNTIGQANGVYDKP+DLRFCD
Sbjct: 61  VACGFLAAWAVTAASPVIAANQRLPPLSTEPDRCERAFVGNTIGQANGVYDKPIDLRFCD 120

Query: 121 YTNEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGK 180
           YTNEKS LKGKSL AALMSDAKFDGADM+EVVMSKAYAVGASFKG DF+NAV+DRVNFGK
Sbjct: 121 YTNEKSNLKGKSLAAALMSDAKFDGADMSEVVMSKAYAVGASFKGVDFSNAVLDRVNFGK 180

Query: 181 SDLEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           + LEGAVFKNTVLSGSTF EA+L   +FEDTIIGY+DLQK+C N ++S +GR  LGCR
Sbjct: 181 AHLEGAVFKNTVLSGSTFNEAQLQDAVFEDTIIGYIDLQKLCTNTTLSPDGRAELGCR 238
[Close]
BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
Match: A0A061G209_THECC (Tetratricopeptide repeat-like superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_015450 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 4.600e-85
Identity = 165/238 (69.33%), Postives = 190/238 (79.83%), Query Frame = 1 

		  

Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEK--ENSSQFKELRN 60
           MA++   +  N +SL+  S KR      +L L   INCS+    + K  ++SS FKELR+
Sbjct: 1   MATLSTPLSQNALSLRQLSTKRLHCPLHQLPLPIRINCSSASKCVFKTEKSSSPFKELRS 60

Query: 61  VAFGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCD 120
           VA GLLA  AV  ASPVIAANQRLPPLS +P+RCERAFVGNTIGQANGVYDKPLDLRFCD
Sbjct: 61  VACGLLAVCAVATASPVIAANQRLPPLSTEPNRCERAFVGNTIGQANGVYDKPLDLRFCD 120

Query: 121 YTNEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGK 180
           YTNEKS LKGKSL AALMSDAKFDGADM+E VMSKAYAVGASFKG +F+NAV+DRVNF K
Sbjct: 121 YTNEKSNLKGKSLAAALMSDAKFDGADMSEAVMSKAYAVGASFKGANFSNAVLDRVNFDK 180

Query: 181 SDLEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGCR 237
           +DL GAVFKNTVLSGSTF  A+L+  +FEDTIIGY+DLQK+C N S+S +GR  LGCR
Sbjct: 181 ADLRGAVFKNTVLSGSTFNNAQLEDAVFEDTIIGYIDLQKLCTNTSVSADGRAELGCR 238
[Close]
BLAST of Spo02595.1 vs. ExPASy Swiss-Prot
Match: TL17_ARATH (Thylakoid lumenal 17.4 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=TL17 PE=1 SV=2)

HSP 1 Score: 297.7 bits (761), Expect = 1.100e-79
Identity = 160/241 (66.39%), Postives = 188/241 (78.01%), Query Frame = 1 

		  

Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAV-----GNGLEKENSSQFKE 60
           MAS+ +    N IS    SV       R+ +    ++CSA      G G++K +    KE
Sbjct: 1   MASLPVQFTRNQISSPFFSVNLR----REPRSLVTVHCSAGENRENGEGVKK-SLFPLKE 60

Query: 61  LRNVAFGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLR 120
           L ++A   L    +T ASPVIAANQRLPPLS +PDRCE+AFVGNTIGQANGVYDKPLDLR
Sbjct: 61  LGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTIGQANGVYDKPLDLR 120

Query: 121 FCDYTNEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVN 180
           FCDYTN+++ LKGK+L+AALM  AKFDGADMTEVVMSKAYAV ASFKG +FTNAVIDRVN
Sbjct: 121 FCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASFKGVNFTNAVIDRVN 180

Query: 181 FGKSDLEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICLNKSISEEGRDVLGC 237
           FGKS+L+GAVF+NTVLSGSTFEEA L+ V+FEDTIIGY+DLQKIC N+SI+EEGR VLGC
Sbjct: 181 FGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICRNESINEEGRLVLGC 236
[Close]
BLAST of Spo02595.1 vs. ExPASy Swiss-Prot
Match: TL203_ARATH (Thylakoid lumenal protein TL20.3, chloroplastic OS=Arabidopsis thaliana GN=TL20.3 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.300e-10
Identity = 62/240 (25.83%), Postives = 106/240 (44.17%), Query Frame = 1 

		  

Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60
           M S+ IS   + +S      +R+L   R+LQLS   N     +   +E      E     
Sbjct: 11  MKSLDISRSSSSVSRSPYHFQRYLL--RRLQLSSRSNLEIKDSSNTREGCCSSAESNTWK 70

Query: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120
                 L+   A+ VIA++  +P ++ + +R E    G   G  +       DL    ++
Sbjct: 71  ----RILSAAMAAAVIASSSGVPAMA-ELNRFEADTRGE-FGIGSAAQYGSADLSKTVHS 130

Query: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180
           NE    +  + T+A M ++ F G+      + KA A  A+F G D ++ ++DR+   +++
Sbjct: 131 NEN--FRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEAN 190

Query: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKIC-----LNKSISEEGRDVLGC 236
           L  AV   +VL+ S    AK++G  F D +I  +  Q +C      N     + R  LGC
Sbjct: 191 LTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240
[Close]
BLAST of Spo02595.1 vs. ExPASy Swiss-Prot
Match: TL17_SPIOL (Thylakoid lumenal 17.4 kDa protein (Fragment) OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 53.9 bits (128), Expect = 2.700e-6
Identity = 23/23 (100.00%), Postives = 23/23 (100.00%), Query Frame = 1 

		  

Query: 78  ANQRLPPLSNDPDRCERAFVGNT 101
           ANQRLPPLSNDPDRCERAFVGNT
Sbjct: 1   ANQRLPPLSNDPDRCERAFVGNT 23
[Close]
BLAST of Spo02595.1 vs. TAIR (Arabidopsis)
Match: AT5G53490.3 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 295.0 bits (754), Expect = 4.000e-80
Identity = 148/195 (75.90%), Postives = 170/195 (87.18%), Query Frame = 1 

		  

Query: 42  GNGLEKENSSQFKELRNVAFGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTI 101
           G G++K +    KEL ++A   L    +T ASPVIAANQRLPPLS +PDRCE+AFVGNTI
Sbjct: 57  GEGVKK-SLFPLKELGSIACAALCACTLTIASPVIAANQRLPPLSTEPDRCEKAFVGNTI 116

Query: 102 GQANGVYDKPLDLRFCDYTNEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASF 161
           GQANGVYDKPLDLRFCDYTN+++ LKGK+L+AALM  AKFDGADMTEVVMSKAYAV ASF
Sbjct: 117 GQANGVYDKPLDLRFCDYTNDQTNLKGKTLSAALMVGAKFDGADMTEVVMSKAYAVEASF 176

Query: 162 KGTDFTNAVIDRVNFGKSDLEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKICL 221
           KG +FTNAVIDRVNFGKS+L+GAVF+NTVLSGSTFEEA L+ V+FEDTIIGY+DLQKIC 
Sbjct: 177 KGVNFTNAVIDRVNFGKSNLKGAVFRNTVLSGSTFEEANLEDVVFEDTIIGYIDLQKICR 236

Query: 222 NKSISEEGRDVLGCR 237
           N+SI+EEGR VLGCR
Sbjct: 237 NESINEEGRLVLGCR 250
[Close]
BLAST of Spo02595.1 vs. TAIR (Arabidopsis)
Match: AT1G12250.1 (Pentapeptide repeat-containing protein)

HSP 1 Score: 66.2 bits (160), Expect = 3.000e-11
Identity = 62/240 (25.83%), Postives = 106/240 (44.17%), Query Frame = 1 

		  

Query: 1   MASIGISIHPNGISLKNSSVKRHLFSARKLQLSFPINCSAVGNGLEKENSSQFKELRNVA 60
           M S+ IS   + +S      +R+L   R+LQLS   N     +   +E      E     
Sbjct: 11  MKSLDISRSSSSVSRSPYHFQRYLL--RRLQLSSRSNLEIKDSSNTREGCCSSAESNTWK 70

Query: 61  FGLLATLAVTAASPVIAANQRLPPLSNDPDRCERAFVGNTIGQANGVYDKPLDLRFCDYT 120
                 L+   A+ VIA++  +P ++ + +R E    G   G  +       DL    ++
Sbjct: 71  ----RILSAAMAAAVIASSSGVPAMA-ELNRFEADTRGE-FGIGSAAQYGSADLSKTVHS 130

Query: 121 NEKSKLKGKSLTAALMSDAKFDGADMTEVVMSKAYAVGASFKGTDFTNAVIDRVNFGKSD 180
           NE    +  + T+A M ++ F G+      + KA A  A+F G D ++ ++DR+   +++
Sbjct: 131 NEN--FRRANFTSADMRESDFSGSTFNGAYLEKAVAYKANFSGADLSDTLMDRMVLNEAN 190

Query: 181 LEGAVFKNTVLSGSTFEEAKLDGVIFEDTIIGYVDLQKIC-----LNKSISEEGRDVLGC 236
           L  AV   +VL+ S    AK++G  F D +I  +  Q +C      N     + R  LGC
Sbjct: 191 LTNAVLVRSVLTRSDLGGAKIEGADFSDAVIDLLQKQALCKYATGTNPLTGVDTRKSLGC 240
The following BLAST results are available for this feature:
BLAST of Spo02595.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902224199|gb|KNA19719.1|9.1e-12799.5hypothetical protein SOVF_0590... [more]
gi|731321534|ref|XP_010671403.1|5.9e-11084.7PREDICTED: thylakoid lumenal 1... [more]
gi|302143933|emb|CBI23038.3|2.3e-9076.0unnamed protein product [Vitis... [more]
gi|359490718|ref|XP_002275994.2|2.3e-9076.0PREDICTED: thylakoid lumenal 1... [more]
gi|568877960|ref|XP_006491985.1|4.6e-8671.8PREDICTED: thylakoid lumenal 1... [more]
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BLAST of Spo02595.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RLC7_SPIOL6.3e-12799.5Uncharacterized protein OS=Spi... [more]
A0A0J8FJB3_BETVU4.1e-11084.7Uncharacterized protein OS=Bet... [more]
E0CV77_VITVI1.6e-9076.0Putative uncharacterized prote... [more]
V4TLV7_9ROSI9.3e-8671.0Uncharacterized protein OS=Cit... [more]
A0A061G209_THECC4.6e-8569.3Tetratricopeptide repeat-like ... [more]
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BLAST of Spo02595.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
TL17_ARATH1.1e-7966.3Thylakoid lumenal 17.4 kDa pro... [more]
TL203_ARATH5.3e-1025.8Thylakoid lumenal protein TL20... [more]
TL17_SPIOL2.7e-6100.Thylakoid lumenal 17.4 kDa pro... [more]
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BLAST of Spo02595.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT5G53490.34.0e-8075.9Tetratricopeptide repeat (TPR)... [more]
AT1G12250.13.0e-1125.8Pentapeptide repeat-containing... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 172..208
score: 1.5E-7coord: 125..163
score: 4.
NoneNo IPR availablePANTHERPTHR14136UNCHARACTERIZEDcoord: 13..230
score: 1.1E
NoneNo IPR availablePANTHERPTHR14136:SF11THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTICcoord: 13..230
score: 1.1E
NoneNo IPR availableunknownSSF141571Pentapeptide repeat-likecoord: 114..222
score: 1.12

RNA-Seq Expression