Spo02525 (gene)

Overview
NameSpo02525
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionRNA-binding family protein
Locationchr3 : 6372430 .. 6380080 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GGGCCGTGTTTGGTTCGCAAAGAGTCCGTATTCCTGAAATAAAAACTTTAAAACCCCTTCTCTTCCTCTTCTGTAACTCCGTCTTCCTCAGATAACCGAAAATGTCAGATCAATACTGGAGGTACAACGACTCACGGCAACCCCCCGCCGTTTCCTCACTCCCCGTTAAACGCCCTCGCTCCGAATATGGTAATCCCCTTTTTCTATTTTCTATTTAATTTATCGTTTCAGTTAATTCTAGGGTTTATCTATAAATTACAAAAATGAAAAAAATCAATTTTCTTAGTGGTGGTTTTAGCTCTTTATATCTTTCAACCCTTTTCTTTTTCTTTAACGATATAGTTTGAATCTTATTTTGAAGCATGCTTAGTCGACAAAGTCTTGTTATTTTGTGTATGTGTGTGTCCTAATTAACATAATTAGGTGTTTATAGAGCTTCAGTTTAACAGCCTAAGATCCCTTTTCTTAACTTTTATTATCACATATTCTTGTTTTAATTATTTATTTATTTATTATTGTCCAGTTTAATTGTTTGGTTTGTAAAGAAATGATTTTTACTGCCCAATTTAGCTCCTTAATGATAAATGTTAAGGCAATAAATCTAGTGTGAAGCTCATAATGATGGGATTTCCATTTTATTGTTTGAAATTCGAAATTTTAATTCAGTTAAGGTTGTAGTGTTTACATTTGCTGTCCATTCACAAGGTTATGCTCGTATGACTTTCGTCCTGCCTGATTCGGTTGCCACTTGCCGGAGATTCCACCTCCAATGTCATTGAATGGATTTTGTTCGCGTTGTTGGATAATCTGTAGTTGAGTACATTTATGTTGAAGTTTCCAGTTTGTCATAACATGCATAATGGGATGATGGATAAATTATGTACCTTATCAGGATGAATAAAGGATTTGTGAATATGTAAAATCCTACCCGGTTTTTATCTGCAAGGGGTTTCAGATCACCACTAAAAGACCCTTCTGTATCCTTTCAGCAGAGGTGAAAATGCTCGTTTTCTGATTAAAAAACGAATAGGTATTTGGCTTATTGAAAGAATTGTTTGTGCTTCTTTATACTTTAGTTATATGGCAGTCCAAAGTCAAGTAAAGGGTTGGTGGCTGGCCAGTGGTTGGGGGGTGTAAAGGGATATCCATGGAAATTAGCTCCATTATATCTTAACTGCCATTCATTAGAAAGTAGGAACAATAAGTACGAATAGTGTACTCATAAAATGATCATTTTATACAACTTGATGTTTCAATTGTTTGTAGGTCTTTGTTAAAAGTTGTGCACTTCAATTTCTTTTTATCTATTTAGATTTGATTTCATCTTCTAGTTACAATTCAGTTTTGCATGTATTGATCCTTGACTTGGATAGGCATTTTGCCCGTGCTACTCTACGCTAGGGTCCACCAACATGGATATGTTTTGATAGCTGCTTTTCCAAACCTTGCTTATGTACATTTGATTTCTTTAATAATGAATACATATACTATGCTGAATCATTGACATTGATCGTGTAGATGATCCATCTGGACGGGATCTGGCTAGTTATTATTCTCGGGAGGATGACAGGGTAACTCAGCGTGCAGTTAGAGATACCGAGTCCATAAATGAATCTTATGATCGATATCTACGTAATGGGGTACTATTCTTGTATTATCTGTGTTTTGGCCTATACTTTATCTGTGATTTGGTCAATCTTTGACACTAACAACGTCTATAATCCAGCAAATTTATCCTGGGGCAGACTCAGGCAGATTACCTGCTTCTGGAATATCTAGTCATGCTGACCCTCGCATGGGAAATGATCCCCGAATGGGAAATGATCCCCGAATGGGAAATGATCCTCGAATGGGAAATGATCCGCGCATGTCTGGTGACCCGCGTATGGTAAGCGATCCACGAATGAGTAGTGACCCTCGAATGGCAAGTATTGGAATTATGGACCCTGGAATGTCAGTAAAGGGGCGGGGATCCAACCTTGGATCNTGGCAAGTATTGGAATTATGGACCCTGGAATGTCAGTAAAGGGGCGGGGATCCAACCTTGGATCCGGAAGGTCTGAGGTTCCCCTTCCACCTGATGCTAGCAGTACTCTGTATGTGGAGGGCTTGCCTGCAAACTGTACGCGTAGGGAGGTGGCCCGTATCCTTGCATTATTGCCTTTTATTTGTTTATTATTTACTCCTTTNTGGCAAGTATTGGAATTATGGACCCTGGAATGTCAGTAAAGGGGCGGGGATCCAACCTTGGATCCGGAAGGTCTGAGGTTCCCCTTCCACCTGATGCTAGCAGTACTCTGTATGTGGAGGGCTTGCCTGCAAACTGTACGCGTAGGGAGGTGGCCCGTATCCTTGCATTATTGCCTTTTATTTGTTTATTATTTACTCCTTTCGTATTTTCCATAAATANCCCCCCCCCCCCCCCCCCCCTTTCCTAGAACTACGTATTTCCTTCACTTCTTTTGGCAGACATTTTCCGCCCCTTTGTGGGCTACAAGGAAGTCAGGCTTGTGACCAAGGAAGCAAGACATGTACGTTTACTATTTACTTCATCCATTGTTTAGCATGTTTTTCATAGACTGCACTCATATGTTAATTTGATGCGTAGTCTGGGGGAGATCCAATTGTGCTGTGCTTTGTTGATTTTTTGAGTCCTGCACATGCTGCAACAGCGTTGGATGCCTTACAAGGTGAGTTCGTTGAAGGTTTTCTTCCCTGTGTACTAACTTTGTACATCAACAGCTATCTTATTTCTGATCAATTATGTGCCTGTTACTTTTCTGAACCCATTCTGGAGATGCAAAGTATGAGCTTCAAAAGTTCAATGGTCTTTTGAGTGCTTTTGTTCTTGTTGGTTGCTTTAAAAATTGCCTCTTCTGGGTTATTACTTTTACTAGGCATGTAGGTAGGGGCTAGTTGAGATGAGAATGCTTGAAATAGACTTAATTACTCTTGATTTTCATATGAATCCCTACCTAGTCTACGTACATGTGTACCATAAGACTTTGTGTTTATAGTTTCCTGTCTTTGATTCTGTTATTTTTATAAACGGAGGCATACAGTGTTACGATGGGAATCGAGCACGGGACCAATTAGGTTTTCTGTGTTAAATTTCCCCGTAGTTGTATAGTCGAAAGGGTAGTTTGGAGTCGAGATGTTTAGTCTGAAAATGCAAGCGAATATTTTCCGAGTCAAGATCCATTTGCACATCTCGCAGGAATCAAGTGCTTTTACATAAATACACCAAGGTTTGGGATTTTTTTTCTTTCAAAACTGAAGCCACAATATCCTAATAGCTTGGCCATGTAGATCTGTTTATCTACATTCATATCGCTGTCAAAAAACGTTTCGTCATTCCATATGAAATCTGAACATATTAGAGTGTAATAGGAAGGTGCCTCTTTTGATGGAACGGTAAACTTATTGATAGGCCAATATCGCATTGGTTCTGAAATACTCCTTCTGGTATTATGCCATAAGAAGGCTTTTGAAAAGGGAATGATACTCGTTTTGATGGGAGGTTTTTTTTACGTTAACCATGAAAGGTTGATGTTTTTGCCAAAAAGTGTTTGGTCTTATCATATGGGCCATTTAGGTTGATTTGGAGGTTTTGGGAATAGCTACTTTACGTCTTTCATCCAACTACTATTACCTTAGTAATTGGTTATTTCTTCTTGATCAGACAATGGTTGCAGTTGGTAAACAACTGGGAATTTTTTTAACTCATTTTTGTTTTCTTTCATTTTTAAATAGTCTGGAATAATTTGGGTGACCCGCATGAATCTTGAAAGGTTCAACATAGAGCCTTGTTGCGGAGATTTTTTTCCCATGGTTTGACACCCTCTTTTCTTTCCTTTGCGAATTTTTCTGAATGGAAGGAAAAGAGACCTTTTTTCTTCAAGAGTTGCGTTAAATAGGGTCTGTTTGTCCCTTGTCCTGTCTCTCAAGCCTTAATATGATGACCTTTAAATTTTAGTTAGCTATATAAAAAAAAGTTATGTTTTGGCCTTGAACTTGTACGTAAAGATATGGTACGTTCTAGCTCGTAATGATCCCAAAATACGTGTGAACCTGGACCATAGTCTATTTTGCGGCGTGAGTAAAGCTCGATTTTGCAGGTTATAAGTTCGATGAGAGTGACCGTGACACTGCGATTTTAAGGCTGCAATTTGCTCGTTATCCTGGTGCAAGGTCCGGCGGTGGCCACCGTGGAAAACGTTGAACGGTGTGATTTTGCAGGTGATAAAAAGTTGTCCATTTTCTCAGGCTTAGGCATTATTAGCTCTATTAGGTTATAGCTGAAACTGGAACAATTTATTCGCTGTGAATTACCGAAGGGCGTTTCTATGTAGGAATCCGCTCGAAATGGGAGGTTTGCGATATAGAGGTTGATACGATACGATCACCCTTACAATTGGAGAACCGTGCTCAAATTTCAAACTGCGGATTTTGTAAGGACCAACTCGTGGGATTCGGGGGCTTTTATAGCTAGGGAGTTACGAACTTGTACCCTTTTATTAGAAACATATAAGTATTCCAGAGTGCCAGACTGTATTCGCTTTTAGATACTTGGAATTATTAATTTTATGTATCCGCGTTTTCCTTGCTTATAGAAATTTCTGCATTTCCCGGGATTAATTTCTATGCCTGGGGATAGTTAGCAGAGGAGTGCAGAGTACACTACATGACCTCTCTTCGTCGTTGTTTTGGTTCTTGTAATCACTTGAAGTGAAAGCTGGCTAATATTTACCTTGTTTTTTTCCTTTCGTGTGTTTTTTTGTTTGCTGTTTTGGCCTTGGGGAGGGGGAGACTGTTTCTTTTACCCGTTTTCACATTATTGCAGGTTAATTGCATTTTTTTTAATAAAAAATTTGGTGTTAAAATTTCAGTTTTTTCCGCCTTGCCTAAGCCCAAAATTCTCAAATAATCTCCTCTCAAATGTATTCAAACATTTTATACTTGGAATCTAGAGTACCTCTTATCCAGAGAACAAGAGGTTCTGTACTTATGTCTTATGTCTTCAATAGAATTAGGTGATGAGGTATTTTGATAATAAGTACTCCCTCCGTCCCTTAATACTCGCACCGGTTTGACCGGTGCGGAATTTAAGACATCTAAATTGACTTATTAATTTAATGGGTGTTAGTTGATAGTGGGGTATTTTTTTAATATAGTTAGTGGGAAATGGGTAAGAGGTGGAGAGTGGTGAGTGGGTTGTGAATTTTTAAATGATTTTTTGTAGGGAATAGGGGTGTATGTGGGGTTAGTAAGTAAGTGTGAGAAATAATATAATATTGGTATAAATTTCCATTTATAGAAACGGTGCAAGTTTTAAGGAACGGCCCGAAAAGGAAAGCGGTGCGAGTATTAAGGGACGGAGGGAGTATATATTAATCCGTACTACTTTATTTTGCTACCTTTTCAATTGAAACTCTGAGAGATAGACCTTAAACTTTGTTGCCTGTTCTGCTTCTGTTACTTCTGAGCTGTGATAAGGTCTGACGGTTATTGGTTTTTCTACCTAGTATGGAGTACTCCGTATTTCATTCTCCTATATGGCGGTATGAGTGTATTCAGTTTCATCTTGTTCCTTGTGGTGACAGAATTTTAACCTCTGCAAAATTCTTTTCACGATGAATTGCTGTCTGTTTCTAGAGGAACTTGGATGCAATTACCAAGACCAAGTAGTTGGAGGAAGCATTATCCTTGAACTTGATAGTATACGTGAATCTGAGCTCTTATTTAGGTACTTATTTTGGAATTGATGTTGATCGATTCCAAACTTTTTTCATATGTTAATTTCCGTTTCAGGCTACTACCATGGTTTATGTTAATTGTTAAGTACTAGGATGATCACGATGTTTGAACCAGGTAGGTTAACTCTGTTTTGGAGAGTCTCTGTGCATATCAGTAGCTGAGTCTTTGACCTGCATTCGAAAGCATGCTTTTCTTTGATGTCTTAGGGTGAGCACGGGAGTGTAGTCATGGTTGAGTGTCTTAAGCAGTGCGGCCAGGACCTACATTAAGCTGTTTAGGTCTGTGATTCATGCAGGTGGTCAATAGGGAGTTTGCCTGATATCTGTGTTTCAAGTTCTGAAACTTCTGTGGGTATTCTAGTATAAGAGCGCGGCTGTGTGCGAGAATTTTGTTATTCCGGCTACTTGATCCTACCTTTAGCTTAGACCTGGTCAACTATAGCCCGGCTTGAAAAAGTACGGATTTGGGTAGCCTAAAATATGTTTTTAGACCAAAACCCCAGCCCGGCTGCAAAACCCAGACCAAATTAATGGATTTGGGCAAGATTTTTTGTGTTGAAGCCTGGCCCGACCCGACCCGAAATTTGATCACCTCTCCTTTAGCATGGTTCTCTGGACGAGTGTTGGGGTAGCGATCAGCTGGAAATAGTTTGCTTTGATGGATATACTCATATACGGAATGCAACATCTTGTAAAATGGATATGAATTTCCCAGATCAGAATTGTCGTGGTCTAGAACTGGATTGTGTTGGTAATTAGTTTAGGGGTGTCAAATCGGGTCATCGGATCGGTTTCGGATCGGTTATAAACGGTTCGGGTCTTGTCGAAATCGGATAATATCGGGTTAATGTTTCTATCCGGGTCAATTCGGATCGGTTCGGATAACTTCGGTTTCGGATGAAGTCGGTTAATATGATGTTACAAATTTGTTATTGAGTTCATTCCTCTGCTTGACCTATCTCACCAATGTGAGATTGACTTTGAAATCATGTTCAAAGTGTACCAAAAATTAAAACAGAAAAATGCTCGGATGCACTTAACTTTACTACTTTAGGTACACCGAGATGTATAATAGATGTTCTTGATGTATTGCTCCATTTCCACGTGATTATTACATGTATAATTGCCAAACTTTTGCAAAAATGCAATGTACCTATCTCAGAGTTTGTAGATTGTTATGTAGAAAACTTTTCCGTAGACAAATAATCAGTTGCTTATTATTTTCCAATTTCTAAAAGTTTCTTTCTCAAAAGAGTATTGGAGTATATGTTGTAGGTTAAGTGACTGGCCGTTGGTAGGAATCACCAAGCTTTTGAAAGGGTGTGTGTTAAATGTTTTCATCATTGGCCTAAACTATGGGCGTAAAATTTTATAGTGTATTTTTAGTTTCGGCCTTTTAAAATTTAAGTATAATTGTATAATTTCCATACGACACTGTTTAATTCTTCTGATGCCCCCTCCTCCCGTTAATATGTTCGAGATCTGCCACTAGTTTTCACGTTCTTTGCTATTAGAGTGTGAACAATGTAACAACTAATGTACAGGGCCGGCTAAAGGGAGGTCCAGGCGGACCTCCAGCACCGGGCCACAAAATTGGGGCCCCAAAAAGAAACTATGTTACAAATATTATATATTTAACGGTTGTTTAGTTATGCATTATGTAATCTTTGTCCCAATTGGTAAGGAATCATAAGTGTGGTAGCCAAGACCAGGGTTCGATTCGATTCTTCTCCTGCCCCCTGTTTTTATTTGCTTTTTTCATGCCCATCAAACATTTACATCAATTTTCTCAAACCATCATACATAAAATGTTATTATTAATTCGACTCTATAATTTGTATAAATAAAACAATATTAATATAATAATTATGTGTGTTACATTAAATAATTGCCCG

mRNA sequence

GGGCCGTGTTTGGTTCGCAAAGAGTCCGTATTCCTGAAATAAAAACTTTAAAACCCCTTCTCTTCCTCTTCTGTAACTCCGTCTTCCTCAGATAACCGAAAATGTCAGATCAATACTGGAGGTACAACGACTCACGGCAACCCCCCGCCGTTTCCTCACTCCCCGTTAAACGCCCTCGCTCCGAATATGATGATCCATCTGGACGGGATCTGGCTAGTTATTATTCTCGGGAGGATGACAGGGTAACTCAGCGTGCAGTTAGAGATACCGAGTCCATAAATGAATCTTATGATCGATATCTACGTAATGGGCAAATTTATCCTGGGGCAGACTCAGGCAGATTACCTGCTTCTGGAATATCTAGTCATGCTGACCCTCGCATGGGAAATGATCCCCGAATGGGAAATGATCCCCGAATGGGAAATGATCCTCGAATGGGAAATGATCCGCGCATGTCTGGTGACCCGCGTATGGGGCGGGGATCCAACCTTGGATCCGGAAGGTCTGAGGTTCCCCTTCCACCTGATGCTAGCAGTACTCTGTATGTGGAGGGCTTGCCTGCAAACTGTACGCGTAGGGAGGTGGCCCACATTTTCCGCCCCTTTGTGGGCTACAAGGAAGTCAGGCTTGTGACCAAGGAAGCAAGACATTCTGGGGGAGATCCAATTGTGCTGTGCTTTGTTGATTTTTTGAGTCCTGCACATGCTGCAACAGCGTTGGATGCCTTACAAGGTTATAAGTTCGATGAGAGTGACCGTGACACTGCGATTTTAAGGCTGCAATTTGCTCGTTATCCTGGTGCAAGGTCCGGCGGTGGCCACCGTGGAAAACGTTGAACGGTGTGATTTTGCAGGAATCCGCTCGAAATGGGAGGTTTGCGATATAGAGGTTGATACGATACGATCACCCTTACAATTGGAGAACCGTGCTCAAATTTCAAACTGCGGATTTTGTAAGGACCAACTCGTGGGATTCGGGGGCTTTTATAGCTAGGGAGTTACGAACTTGTACCCTTTTATTAGAAACATATAAGTATTCCAGAGTGCCAGACTGTATTCGCTTTTAGATACTTGGAATTATTAATTTTATGTATCCGCGTTTTCCTTGCTTATAGAAATTTCTGCATTTCCCGGGATTAATTTCTATGCCTGGGGATAGTTAGCAGAGGAGTGCAGAGTACACTACATGACCTCTCTTCGTCGTTGTTTTGGTTCTTGTAATCACTTGAAGTGAAAGCTGGCTAATATTTACCTTGTTTTTTTCCTTTCGTGTGTTTTTTTGTTTGCTGTTTTGGCCTTGGGGAGGGGGAGACTGTTTCTTTTACCCGTTTTCACATTATTGCAGGTTAATTGCATTTTTTTTAATAAAAAATTTGGTGTTAAAATTTCAGTTTTTTCCGCCTTGCCTAAGCCCAAAATTCTCAAATAATCTCCTCTCAAATGTATTCAAACATTTTATACTTGGAATCTAGAGTACCTCTTATCCAGAGAACAAGAGGTTCTGTACTTATGTCTTATGTCTTCAATAGAATTAGGTGATGAGGTATTTTGATAATAAGTACTCCCTCCGTCCCTTAATACTCGCACCGGTTTGACCGGTGCGGAATTTAAGACATCTAAATTGACTTATTAATTTAATGGGTGTTAGTTGATAGTGGGGTATTTTTTTAATATAGTTAGTGGGAAATGGGTAAGAGGTGGAGAGTGGTGAGTGGGTTGTGAATTTTTAAATGATTTTTTGTAGGGAATAGGGGTGTATGTGGGGTTAGTAAGTAAGTGTGAGAAATAATATAATATTGGTATAAATTTCCATTTATAGAAACGGTGCAAGTTTTAAGGAACGGCCCGAAAAGGAAAGCGGTGCGAGTATTAAGGGACGGAGGGAGTATATATTAATCCGTACTACTTTATTTTGCTACCTTTTCAATTGAAACTCTGAGAGATAGACCTTAAACTTTGTTGCCTGTTCTGCTTCTGTTACTTCTGAGCTGTGATAAGGTCTGACGGTTATTGGTTTTTCTACCTAGTATGGAGTACTCCGTATTTCATTCTCCTATATGGCGGTATGAGTGTATTCAGTTTCATCTTGTTCCTTGTGGTGACAGAATTTTAACCTCTGCAAAATTCTTTTCACGATGAATTGCTGTCTGTTTCTAGAGGAACTTGGATGCAATTACCAAGACCAAGTAGTTGGAGGAAGCATTATCCTTGAACTTGATAGTATACGTGAATCTGAGCTCTTATTTAGGTACTTATTTTGGAATTGATGTTGATCGATTCCAAACTTTTTTCATATGTTAATTTCCGTTTCAGGCTACTACCATGGTTTATGTTAATTGTTAAGTACTAGGATGATCACGATGTTTGAACCAGGTAGGTTAACTCTGTTTTGGAGAGTCTCTGTGCATATCAGTAGCTGAGTCTTTGACCTGCATTCGAAAGCATGCTTTTCTTTGATGTCTTAGGGTGAGCACGGGAGTGTAGTCATGGTTGAGTGTCTTAAGCAGTGCGGCCAGGACCTACATTAAGCTGTTTAGGTCTGTGATTCATGCAGGTGGTCAATAGGGAGTTTGCCTGATATCTGTGTTTCAAGTTCTGAAACTTCTGTGGGTATTCTAGTATAAGAGCGCGGCTGTGTGCGAGAATTTTGTTATTCCGGCTACTTGATCCTACCTTTAGCTTAGACCTGGTCAACTATAGCCCGGCTTGAAAAAGTACGGATTTGGGTAGCCTAAAATATGTTTTTAGACCAAAACCCCAGCCCGGCTGCAAAACCCAGACCAAATTAATGGATTTGGGCAAGATTTTTTGTGTTGAAGCCTGGCCCGACCCGACCCGAAATTTGATCACCTCTCCTTTAGCATGGTTCTCTGGACGAGTGTTGGGGTAGCGATCAGCTGGAAATAGTTTGCTTTGATGGATATACTCATATACGGAATGCAACATCTTGTAAAATGGATATGAATTTCCCAGATCAGAATTGTCGTGGTCTAGAACTGGATTGTGTTGGTAATTAGTTTAGGGGTGTCAAATCGGGTCATCGGATCGGTTTCGGATCGGTTATAAACGGTTCGGGTCTTGTCGAAATCGGATAATATCGGGTTAATGTTTCTATCCGGGTCAATTCGGATCGGTTCGGATAACTTCGGTTTCGGATGAAGTCGGTTAATATGATGTTACAAATTTGTTATTGAGTTCATTCCTCTGCTTGACCTATCTCACCAATGTGAGATTGACTTTGAAATCATGTTCAAAGTGTACCAAAAATTAAAACAGAAAAATGCTCGGATGCACTTAACTTTACTACTTTAGGTACACCGAGATGTATAATAGATGTTCTTGATGTATTGCTCCATTTCCACGTGATTATTACATGTATAATTGCCAAACTTTTGCAAAAATGCAATGTACCTATCTCAGAGTTTGTAGATTGTTATGTAGAAAACTTTTCCGTAGACAAATAATCAGTTGCTTATTATTTTCCAATTTCTAAAAGTTTCTTTCTCAAAAGAGTATTGGAGTATATGTTGTAGGTTAAGTGACTGGCCGTTGGTAGGAATCACCAAGCTTTTGAAAGGGTGTGTGTTAAATGTTTTCATCATTGGCCTAAACTATGGGCGTAAAATTTTATAGTGTATTTTTAGTTTCGGCCTTTTAAAATTTAAGTATAATTGTATAATTTCCATACGACACTGTTTAATTCTTCTGATGCCCCCTCCTCCCGTTAATATGTTCGAGATCTGCCACTAGTTTTCACGTTCTTTGCTATTAGAGTGTGAACAATGTAACAACTAATGTACAGGGCCGGCTAAAGGGAGGTCCAGGCGGACCTCCAGCACCGGGCCACAAAATTGGGGCCCCAAAAAGAAACTATGTTACAAATATTATATATTTAACGGTTGTTTAGTTATGCATTATGTAATCTTTGTCCCAATTGGTAAGGAATCATAAGTGTGGTAGCCAAGACCAGGGTTCGATTCGATTCTTCTCCTGCCCCCTGTTTTTATTTGCTTTTTTCATGCCCATCAAACATTTACATCAATTTTCTCAAACCATCATACATAAAATGTTATTATTAATTCGACTCTATAATTTGTATAAATAAAACAATATTAATATAATAATTATGTGTGTTACATTAAATAATTGCCCG

Coding sequence (CDS)

ATGTCAGATCAATACTGGAGGTACAACGACTCACGGCAACCCCCCGCCGTTTCCTCACTCCCCGTTAAACGCCCTCGCTCCGAATATGATGATCCATCTGGACGGGATCTGGCTAGTTATTATTCTCGGGAGGATGACAGGGTAACTCAGCGTGCAGTTAGAGATACCGAGTCCATAAATGAATCTTATGATCGATATCTACGTAATGGGCAAATTTATCCTGGGGCAGACTCAGGCAGATTACCTGCTTCTGGAATATCTAGTCATGCTGACCCTCGCATGGGAAATGATCCCCGAATGGGAAATGATCCCCGAATGGGAAATGATCCTCGAATGGGAAATGATCCGCGCATGTCTGGTGACCCGCGTATGGGGCGGGGATCCAACCTTGGATCCGGAAGGTCTGAGGTTCCCCTTCCACCTGATGCTAGCAGTACTCTGTATGTGGAGGGCTTGCCTGCAAACTGTACGCGTAGGGAGGTGGCCCACATTTTCCGCCCCTTTGTGGGCTACAAGGAAGTCAGGCTTGTGACCAAGGAAGCAAGACATTCTGGGGGAGATCCAATTGTGCTGTGCTTTGTTGATTTTTTGAGTCCTGCACATGCTGCAACAGCGTTGGATGCCTTACAAGGTTATAAGTTCGATGAGAGTGACCGTGACACTGCGATTTTAAGGCTGCAATTTGCTCGTTATCCTGGTGCAAGGTCCGGCGGTGGCCACCGTGGAAAACGTTGA

Protein sequence

MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESINESYDRYLRNGQIYPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDPRMSGDPRMGRGSNLGSGRSEVPLPPDASSTLYVEGLPANCTRREVAHIFRPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFDESDRDTAILRLQFARYPGARSGGGHRGKR
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02525.1Spo02525.1mRNA


Homology
[Close]
BLAST of Spo02525.1 vs. NCBI nr
Match: gi|902224181|gb|KNA19701.1| (hypothetical protein SOVF_058860 [Spinacia oleracea])

HSP 1 Score: 482.6 bits (1241), Expect = 3.900e-133
Identity = 244/269 (90.71%), Postives = 244/269 (90.71%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESIN 60
           MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESIN
Sbjct: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESIN 60

Query: 61  ESYDRYLRNGQIYPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDPRMSG 120
           ESYDRYLRNGQIYPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDPRMSG
Sbjct: 61  ESYDRYLRNGQIYPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDPRMSG 120

Query: 121 DPRM-------------------------GRGSNLGSGRSEVPLPPDASSTLYVEGLPAN 180
           DPRM                         GRGSNLGSGRSEVPLPPDASSTLYVEGLPAN
Sbjct: 121 DPRMVSDPRMSSDPRMASIGIMDPGMSVKGRGSNLGSGRSEVPLPPDASSTLYVEGLPAN 180

Query: 181 CTRREVAHIFRPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFD 240
           CTRREVAHIFRPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFD
Sbjct: 181 CTRREVAHIFRPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFD 240

Query: 241 ESDRDTAILRLQFARYPGARSGGGHRGKR 245
           ESDRDTAILRLQFARYPGARSGGGHRGKR
Sbjct: 241 ESDRDTAILRLQFARYPGARSGGGHRGKR 269
[Close]
BLAST of Spo02525.1 vs. NCBI nr
Match: gi|731321484|ref|XP_010671379.1| (PREDICTED: uncharacterized protein LOC104888185 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 414.1 bits (1063), Expect = 1.700e-112
Identity = 211/271 (77.86%), Postives = 227/271 (83.76%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESIN 60
           MSD YWRY+DSRQPP VSSL  KRPR +YD P G+DLA YYSR+D+R+T RAVRDTESIN
Sbjct: 1   MSDAYWRYSDSRQPPNVSSLVGKRPRPDYDVPPGQDLAGYYSRDDERLTHRAVRDTESIN 60

Query: 61  ESYDRYLRNGQIYPGADSGRLPASGISSHA--DPRMGNDPRMGNDPRMGNDPRMGNDPRM 120
           +SYDRYLR+GQ+ PGADSGRLP  G+SSHA  DPRMG+DPRMG+DPRMGNDPRMG+DPRM
Sbjct: 61  QSYDRYLRSGQLNPGADSGRLPGYGMSSHAVDDPRMGSDPRMGSDPRMGNDPRMGSDPRM 120

Query: 121 SGDPRM-------------------------GRGSNLGSGRSEVPLPPDASSTLYVEGLP 180
             DPRM                         GRGSNLGSGRSEV LPPDASSTL+VEGLP
Sbjct: 121 GSDPRMVSDPRISNDPRMTGIGIMDPGVSVKGRGSNLGSGRSEVSLPPDASSTLFVEGLP 180

Query: 181 ANCTRREVAHIFRPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYK 240
           ANCTRREVAHIFRPFVGYKEVRLVTKEARHSGGD IVLCFVDFLSPAHAATA+DALQGYK
Sbjct: 181 ANCTRREVAHIFRPFVGYKEVRLVTKEARHSGGDAIVLCFVDFLSPAHAATAMDALQGYK 240

Query: 241 FDESDRDTAILRLQFARYPGARSGGGHRGKR 245
           FDE+DRDTA LRLQFARYPGARSGGGHRGKR
Sbjct: 241 FDENDRDTAALRLQFARYPGARSGGGHRGKR 271
[Close]
BLAST of Spo02525.1 vs. NCBI nr
Match: gi|359490723|ref|XP_002275189.2| (PREDICTED: uncharacterized protein LOC100265772 isoform X2 [Vitis vinifera])

HSP 1 Score: 306.6 bits (784), Expect = 3.900e-80
Identity = 157/251 (62.55%), Postives = 184/251 (73.31%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESIN 60
           M+D YWRY + RQPP + SL  KRPRS+YD P G DL SY+SRED+R   R++RD++SI 
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 61  ESYDRYLRNGQIYPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDPRMSG 120
            SYDRYLRN     G DSGR  + GI+SH                        +DPR+ G
Sbjct: 61  ASYDRYLRNAMPSYGGDSGRPLSGGITSHPV----------------------DDPRVVG 120

Query: 121 DPRMGRGSNLGS-------GRSEVPLPPDASSTLYVEGLPANCTRREVAHIFRPFVGYKE 180
              + +G+ + S       GR E+PLPPDASSTL+VEGLPANCTRREV+HIFRPFVGYKE
Sbjct: 121 VRGVDQGATVKSQSLGFSGGRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYKE 180

Query: 181 VRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFDESDRDTAILRLQFARYPG 240
           VRLV+KE+RHSGGDP+VLCFVDF+SPAHAATA+DALQGYKFDE DRD+  LRLQFARYPG
Sbjct: 181 VRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYPG 229

Query: 241 ARSGGGHRGKR 245
           ARSGGGHRGKR
Sbjct: 241 ARSGGGHRGKR 229
[Close]
BLAST of Spo02525.1 vs. NCBI nr
Match: gi|731424490|ref|XP_010662904.1| (PREDICTED: uncharacterized protein LOC100265772 isoform X1 [Vitis vinifera])

HSP 1 Score: 305.8 bits (782), Expect = 6.600e-80
Identity = 158/252 (62.70%), Postives = 186/252 (73.81%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESIN 60
           M+D YWRY + RQPP + SL  KRPRS+YD P G DL SY+SRED+R   R++RD++SI 
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 61  ESYDRYLRNGQIYP-GADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDPRMS 120
            SYDRYLRN Q+   G DSGR  + GI+SH                        +DPR+ 
Sbjct: 61  ASYDRYLRNAQMPSYGGDSGRPLSGGITSHPV----------------------DDPRVV 120

Query: 121 GDPRMGRGSNLGS-------GRSEVPLPPDASSTLYVEGLPANCTRREVAHIFRPFVGYK 180
           G   + +G+ + S       GR E+PLPPDASSTL+VEGLPANCTRREV+HIFRPFVGYK
Sbjct: 121 GVRGVDQGATVKSQSLGFSGGRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYK 180

Query: 181 EVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFDESDRDTAILRLQFARYP 240
           EVRLV+KE+RHSGGDP+VLCFVDF+SPAHAATA+DALQGYKFDE DRD+  LRLQFARYP
Sbjct: 181 EVRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYP 230

Query: 241 GARSGGGHRGKR 245
           GARSGGGHRGKR
Sbjct: 241 GARSGGGHRGKR 230
[Close]
BLAST of Spo02525.1 vs. NCBI nr
Match: gi|645258032|ref|XP_008234694.1| (PREDICTED: U1 small nuclear ribonucleoprotein A-like [Prunus mume])

HSP 1 Score: 299.3 bits (765), Expect = 6.200e-78
Identity = 159/248 (64.11%), Postives = 183/248 (73.79%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPP--AVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTES 60
           M+D YWRY+D+RQPP  A++S+  KRPRS+YD   G DL SYYS EDDR + R +RDT+S
Sbjct: 1   MADAYWRYSDARQPPQSAMNSVVGKRPRSDYDAHGGHDLPSYYSHEDDRGSLRGIRDTDS 60

Query: 61  INESYDRYLRNGQI--YPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDP 120
           IN SYDRYLR+ Q+  Y G  S R  + G+      R  +DPRM           MG   
Sbjct: 61  INASYDRYLRSAQMPSYSGGQSARTLSGGLPG----RSVDDPRM-----------MGMGG 120

Query: 121 RMSGDPRMGRGSNLGSGRSEVPLPPDASSTLYVEGLPANCTRREVAHIFRPFVGYKEVRL 180
              G P   R   +GSGR E PLPP A+STL+VEGLP NCTRREVAHIFRPFVGYKEVRL
Sbjct: 121 VEPGAPVKDRVLGMGSGRPEAPLPPGATSTLFVEGLPPNCTRREVAHIFRPFVGYKEVRL 180

Query: 181 VTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFDESDRDTAILRLQFARYPGARS 240
           V+KE+RH GGDP+VLCFVDF+SPAHAATA+DALQGYKFDE DRD+  LRLQFARYPGARS
Sbjct: 181 VSKESRHPGGDPLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYPGARS 233

Query: 241 GGGHRGKR 245
           GGGHRGKR
Sbjct: 241 GGGHRGKR 233
[Close]
BLAST of Spo02525.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RJL1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_058860 PE=4 SV=1)

HSP 1 Score: 482.6 bits (1241), Expect = 2.700e-133
Identity = 244/269 (90.71%), Postives = 244/269 (90.71%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESIN 60
           MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESIN
Sbjct: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESIN 60

Query: 61  ESYDRYLRNGQIYPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDPRMSG 120
           ESYDRYLRNGQIYPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDPRMSG
Sbjct: 61  ESYDRYLRNGQIYPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDPRMSG 120

Query: 121 DPRM-------------------------GRGSNLGSGRSEVPLPPDASSTLYVEGLPAN 180
           DPRM                         GRGSNLGSGRSEVPLPPDASSTLYVEGLPAN
Sbjct: 121 DPRMVSDPRMSSDPRMASIGIMDPGMSVKGRGSNLGSGRSEVPLPPDASSTLYVEGLPAN 180

Query: 181 CTRREVAHIFRPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFD 240
           CTRREVAHIFRPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFD
Sbjct: 181 CTRREVAHIFRPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFD 240

Query: 241 ESDRDTAILRLQFARYPGARSGGGHRGKR 245
           ESDRDTAILRLQFARYPGARSGGGHRGKR
Sbjct: 241 ESDRDTAILRLQFARYPGARSGGGHRGKR 269
[Close]
BLAST of Spo02525.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQU1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g051310 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 1.200e-112
Identity = 211/271 (77.86%), Postives = 227/271 (83.76%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESIN 60
           MSD YWRY+DSRQPP VSSL  KRPR +YD P G+DLA YYSR+D+R+T RAVRDTESIN
Sbjct: 1   MSDAYWRYSDSRQPPNVSSLVGKRPRPDYDVPPGQDLAGYYSRDDERLTHRAVRDTESIN 60

Query: 61  ESYDRYLRNGQIYPGADSGRLPASGISSHA--DPRMGNDPRMGNDPRMGNDPRMGNDPRM 120
           +SYDRYLR+GQ+ PGADSGRLP  G+SSHA  DPRMG+DPRMG+DPRMGNDPRMG+DPRM
Sbjct: 61  QSYDRYLRSGQLNPGADSGRLPGYGMSSHAVDDPRMGSDPRMGSDPRMGNDPRMGSDPRM 120

Query: 121 SGDPRM-------------------------GRGSNLGSGRSEVPLPPDASSTLYVEGLP 180
             DPRM                         GRGSNLGSGRSEV LPPDASSTL+VEGLP
Sbjct: 121 GSDPRMVSDPRISNDPRMTGIGIMDPGVSVKGRGSNLGSGRSEVSLPPDASSTLFVEGLP 180

Query: 181 ANCTRREVAHIFRPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYK 240
           ANCTRREVAHIFRPFVGYKEVRLVTKEARHSGGD IVLCFVDFLSPAHAATA+DALQGYK
Sbjct: 181 ANCTRREVAHIFRPFVGYKEVRLVTKEARHSGGDAIVLCFVDFLSPAHAATAMDALQGYK 240

Query: 241 FDESDRDTAILRLQFARYPGARSGGGHRGKR 245
           FDE+DRDTA LRLQFARYPGARSGGGHRGKR
Sbjct: 241 FDENDRDTAALRLQFARYPGARSGGGHRGKR 271
[Close]
BLAST of Spo02525.1 vs. UniProtKB/TrEMBL
Match: E0CV86_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0098g01370 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 4.600e-80
Identity = 158/252 (62.70%), Postives = 186/252 (73.81%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESIN 60
           M+D YWRY + RQPP + SL  KRPRS+YD P G DL SY+SRED+R   R++RD++SI 
Sbjct: 1   MADPYWRYGEVRQPPPIPSLSAKRPRSDYDVPGGHDLPSYFSREDERAAHRSIRDSDSIG 60

Query: 61  ESYDRYLRNGQIYP-GADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDPRMS 120
            SYDRYLRN Q+   G DSGR  + GI+SH                        +DPR+ 
Sbjct: 61  ASYDRYLRNAQMPSYGGDSGRPLSGGITSHPV----------------------DDPRVV 120

Query: 121 GDPRMGRGSNLGS-------GRSEVPLPPDASSTLYVEGLPANCTRREVAHIFRPFVGYK 180
           G   + +G+ + S       GR E+PLPPDASSTL+VEGLPANCTRREV+HIFRPFVGYK
Sbjct: 121 GVRGVDQGATVKSQSLGFSGGRPELPLPPDASSTLFVEGLPANCTRREVSHIFRPFVGYK 180

Query: 181 EVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFDESDRDTAILRLQFARYP 240
           EVRLV+KE+RHSGGDP+VLCFVDF+SPAHAATA+DALQGYKFDE DRD+  LRLQFARYP
Sbjct: 181 EVRLVSKESRHSGGDPLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYP 230

Query: 241 GARSGGGHRGKR 245
           GARSGGGHRGKR
Sbjct: 241 GARSGGGHRGKR 230
[Close]
BLAST of Spo02525.1 vs. UniProtKB/TrEMBL
Match: M5X0S7_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010843mg PE=4 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 5.600e-78
Identity = 162/248 (65.32%), Postives = 186/248 (75.00%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPP--AVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTES 60
           M+D YWRY+D+RQPP  A++S+  KRPRS+YD   G DL SYYS EDDR + R +RDT+S
Sbjct: 1   MADAYWRYSDARQPPPSAMNSVVGKRPRSDYDAHGGHDLPSYYSHEDDRGSLRGIRDTDS 60

Query: 61  INESYDRYLRNGQI--YPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDP 120
           IN SYDRYLR+ Q+  Y G  S R  + G+      R  +DPRM     MG     G DP
Sbjct: 61  INASYDRYLRSAQMPSYSGGQSARTLSGGLPG----RSVDDPRMMG---MG-----GVDP 120

Query: 121 RMSGDPRMGRGSNLGSGRSEVPLPPDASSTLYVEGLPANCTRREVAHIFRPFVGYKEVRL 180
              G P   R   +GSGR E PLPP A+STL+VEGLP NCTRREVAHIFRPFVGYKEVRL
Sbjct: 121 ---GAPVKDRVLGMGSGRPEAPLPPGATSTLFVEGLPPNCTRREVAHIFRPFVGYKEVRL 180

Query: 181 VTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFDESDRDTAILRLQFARYPGARS 240
           V+KE+RH GGDP+VLCFVDF+SPAHAATA+DALQGYKFDE DRD+  LRLQFARYPGARS
Sbjct: 181 VSKESRHPGGDPLVLCFVDFVSPAHAATAMDALQGYKFDEHDRDSVNLRLQFARYPGARS 233

Query: 241 GGGHRGKR 245
           GGGHRGKR
Sbjct: 241 GGGHRGKR 233
[Close]
BLAST of Spo02525.1 vs. UniProtKB/TrEMBL
Match: V4TRQ4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022008mg PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 8.100e-77
Identity = 158/247 (63.97%), Postives = 189/247 (76.52%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPP-AVSSLPVKRPRSEYDDPSGRDLASYYSREDDRVTQRAVRDTESI 60
           M+D YWRY+D+RQP  A+ SL  KRPR++YD PSG +L+SYY+R+DDR   R +RDT+S+
Sbjct: 1   MADGYWRYSDARQPQSALPSLVSKRPRTDYDVPSGHELSSYYTRDDDRGALRGMRDTDSL 60

Query: 61  NESYDRYLRNGQI--YPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGNDPR 120
             SYDRYLR+ QI  Y G  S R  + G+ S    R  +DPR+     +G     G DP 
Sbjct: 61  GASYDRYLRSAQISSYSGGQSARHMSGGMPS----RPVDDPRIVG---IG-----GMDP- 120

Query: 121 MSGDPRMGRGSNLGSGRSEVPLPPDASSTLYVEGLPANCTRREVAHIFRPFVGYKEVRLV 180
             G     R   LG GRSEVPLPPDASSTL+VEGLP++C+RREVAHIFRPFVGYKEVRLV
Sbjct: 121 --GPSAKDRALGLGGGRSEVPLPPDASSTLFVEGLPSDCSRREVAHIFRPFVGYKEVRLV 180

Query: 181 TKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFDESDRDTAILRLQFARYPGARSG 240
           +KE+RH GGDP++LCFVDF+SPAHAATA+DALQGY+FDE DRD+  LRLQFARYPGARSG
Sbjct: 181 SKESRHPGGDPLILCFVDFVSPAHAATAMDALQGYRFDEHDRDSVKLRLQFARYPGARSG 232

Query: 241 GGHRGKR 245
           GGHRGKR
Sbjct: 241 GGHRGKR 232
[Close]
BLAST of Spo02525.1 vs. ExPASy Swiss-Prot
Match: RBP1_MEDTR (RNA-binding protein 1 OS=Medicago truncatula GN=RBP1 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 7.400e-47
Identity = 122/256 (47.66%), Postives = 154/256 (60.16%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDP-----SGRDLASYYSREDDRVTQRAVRD 60
           M+D YW    S  P +      KRPR +Y+ P     SG ++  Y SRE+DR     V+D
Sbjct: 1   MADGYWNRQQSLLPHSGLH---KRPRPDYEMPASGLPSGNEM-HYLSREEDRSGHPMVKD 60

Query: 61  TESINESYDRYLRNGQIYPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMGND 120
           +++I  +YDRYL+ GQ+ P   SG     G         G      +DP        G  
Sbjct: 61  SKTIGSAYDRYLQ-GQV-PSFTSGEASTVGALGLQRGIGGLPNHSLSDPSAMIGRHGGGG 120

Query: 121 PRMSGDPRMGRGSNLG----------SGRSEVPLPPDASSTLYVEGLPANCTRREVAHIF 180
           P ++ +   GRG N G           G     LPPDAS TLY+EGLP++CTRREVAHIF
Sbjct: 121 PDLAPN---GRGMNYGFQPPMDPVSRHGPEPALLPPDASPTLYIEGLPSDCTRREVAHIF 180

Query: 181 RPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFDESDRDTAILR 240
           RPFVGY+EVRLV+KEA+H  GDP++LCFVDF +PA AATAL ALQGYK DE + +++ LR
Sbjct: 181 RPFVGYREVRLVSKEAKHR-GDPLILCFVDFANPACAATALSALQGYKVDEINPESSHLR 240

Query: 241 LQFARYPGARSGGGHR 242
           LQF+RYPG RSGGG R
Sbjct: 241 LQFSRYPGPRSGGGPR 246
[Close]
BLAST of Spo02525.1 vs. ExPASy Swiss-Prot
Match: RBP2_MEDTR (RNA-binding protein 2 OS=Medicago truncatula GN=RBP2 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.600e-46
Identity = 115/262 (43.89%), Postives = 159/262 (60.69%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDP-----SGRDLASYYSREDDRVTQRAVRD 60
           M+D +W       PP    L  KRPR+EYD       SG ++ +Y ++ +     + + D
Sbjct: 1   MADGFWNRQQQHLPPPGGML--KRPRTEYDTAPSGVTSGNEVHNYIAQNNGH---QMLND 60

Query: 61  TESINESYDRYLRNGQI--YPGADSGRLPASGISSHADPRMGNDPRMGNDPRMGNDPRMG 120
           T+ +  +YDR+L++  +  +   ++  +   G +       G+   +G+   MG+   +G
Sbjct: 61  TKILGSAYDRFLQSAGLTSFNSGEASVIGGVGFARGVGELPGHS--LGDPSAMGHLSGVG 120

Query: 121 NDPRMSGDPRMGRGSNLGS----------GRSEVPLPPDASSTLYVEGLPANCTRREVAH 180
             P +S   R GR  N G           G   +PLP DASSTLYVEGLP++ T+REVAH
Sbjct: 121 GGPDLS---RNGRDVNFGGQLPIDAVSRPGPETIPLPRDASSTLYVEGLPSDSTKREVAH 180

Query: 181 IFRPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFDESDRDTAI 240
           IFRPFVGY+EVRLV KE++H GGDP++LCFVDF +PA AATAL ALQGYK DE + +++ 
Sbjct: 181 IFRPFVGYREVRLVAKESKHRGGDPLILCFVDFANPACAATALSALQGYKVDEINPESSY 240

Query: 241 LRLQFARYPGARSGG-GHRGKR 245
           LRLQF+R PG RSGG G RGKR
Sbjct: 241 LRLQFSRSPGRRSGGPGPRGKR 252
[Close]
BLAST of Spo02525.1 vs. ExPASy Swiss-Prot
Match: NSRB_ARATH (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana GN=NSRB PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.100e-45
Identity = 109/216 (50.46%), Postives = 142/216 (65.74%), Query Frame = 1 

		  

Query: 32  PSGRDLASYYSREDDRVTQRAVRDTESINESYDRYLRNGQIY--PGADSGRLPASGISSH 91
           PSG D+ SY S+++DR    +V+DT SI  +YDRYL++ Q +  P  ++G     G+   
Sbjct: 208 PSG-DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQ 267

Query: 92  ADPRMGNDPRMGNDPRMGNDPRMGNDPRMSG-DPRMGRGSNLGS-GRSEVPLPPDASSTL 151
               M   P MG +   G    + +D R +G D   G+  ++G  GR   PLPPD S+TL
Sbjct: 268 GGSNMMPGPSMG-ELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTL 327

Query: 152 YVEGLPANCTRREVAHIFRPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALD 211
           YVEGLP+NC+RREV+HIFRPFVGY+EVRLVT++++H  GDP VLCFVDF + A AATAL 
Sbjct: 328 YVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALS 387

Query: 212 ALQGYKFDESDRDTAILRLQFARYPGARSG--GGHR 242
           ALQ Y+ DE + D+ ILRLQF R PG R G  GG R
Sbjct: 388 ALQDYRMDEDEPDSKILRLQFFRNPGPRPGQRGGRR 421
[Close]
BLAST of Spo02525.1 vs. ExPASy Swiss-Prot
Match: NSRA_ARATH (Nuclear speckle RNA-binding protein A OS=Arabidopsis thaliana GN=NSRA PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.800e-44
Identity = 119/255 (46.67%), Postives = 154/255 (60.39%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDL----ASYYSREDDRVTQRAVRDT 60
           M+D YW  N  RQ       P+KRPRS+++ PS          YY R++D      V DT
Sbjct: 1   MADGYW--NQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGGGYYPRDEDL----DVPDT 60

Query: 61  ESINESYDRYLRNGQIYPGAD--SGRLPASGISSHADPRMGND--PRMGNDPRMGNDPR- 120
            +I  +YDRYL++ Q   G     GR    G     + +  +D   R G    + + P  
Sbjct: 61  RTIGSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGPNG 120

Query: 121 --MGNDPRMSGDPRMGRGSNLGSGRSEVPLPPDASSTLYVEGLPANCTRREVAHIFRPFV 180
             +G DP    +P +GR +          LP DAS+TLYVEGLP+NC+RREVAHIFRPFV
Sbjct: 121 HTIGFDPP---EP-VGRRN----------LPSDASNTLYVEGLPSNCSRREVAHIFRPFV 180

Query: 181 GYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFDESDRDTAILRLQFA 240
           GY+EVRLVTK+++H  GDPIVLCFVDF +PA AATAL ALQGY+ DE++ D+  LRLQF+
Sbjct: 181 GYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRLQFS 233

Query: 241 RYPGARSGGGHRGKR 245
           R PG+R   G RG+R
Sbjct: 241 RKPGSRP--GQRGRR 233
[Close]
BLAST of Spo02525.1 vs. ExPASy Swiss-Prot
Match: MEG5_MAIZE (Protein MATERNALLY EXPRESSED GENE 5 OS=Zea mays GN=MEG5 PE=2 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 6.700e-32
Identity = 71/101 (70.30%), Postives = 80/101 (79.21%), Query Frame = 1 

		  

Query: 117 RMSGDPRM-GRGSNLGSGRSEVPLPPDASSTLYVEGLPANCTRREVAHIFRPFVGYKEVR 176
           RM G   M  RG   G GR E PLPPDASSTLY+EGLPANCTRREV+HIFRPFVG++EVR
Sbjct: 10  RMMGVVGMDSRGMGYG-GRPEPPLPPDASSTLYIEGLPANCTRREVSHIFRPFVGFREVR 69

Query: 177 LVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFDE 217
           LV KE+RH GGDP VLCFVDF +PA A  AL+ALQG+  D+
Sbjct: 70  LVNKESRHPGGDPHVLCFVDFDNPAQATIALEALQGHVTDD 109
[Close]
BLAST of Spo02525.1 vs. TAIR (Arabidopsis)
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding)

HSP 1 Score: 183.3 bits (464), Expect = 1.700e-46
Identity = 109/216 (50.46%), Postives = 142/216 (65.74%), Query Frame = 1 

		  

Query: 32  PSGRDLASYYSREDDRVTQRAVRDTESINESYDRYLRNGQIY--PGADSGRLPASGISSH 91
           PSG D+ SY S+++DR    +V+DT SI  +YDRYL++ Q +  P  ++G     G+   
Sbjct: 208 PSG-DMHSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVGMVRQ 267

Query: 92  ADPRMGNDPRMGNDPRMGNDPRMGNDPRMSG-DPRMGRGSNLGS-GRSEVPLPPDASSTL 151
               M   P MG +   G    + +D R +G D   G+  ++G  GR   PLPPD S+TL
Sbjct: 268 GGSNMMPGPSMG-ELMAGCGGSLPSDFRPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTL 327

Query: 152 YVEGLPANCTRREVAHIFRPFVGYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALD 211
           YVEGLP+NC+RREV+HIFRPFVGY+EVRLVT++++H  GDP VLCFVDF + A AATAL 
Sbjct: 328 YVEGLPSNCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALS 387

Query: 212 ALQGYKFDESDRDTAILRLQFARYPGARSG--GGHR 242
           ALQ Y+ DE + D+ ILRLQF R PG R G  GG R
Sbjct: 388 ALQDYRMDEDEPDSKILRLQFFRNPGPRPGQRGGRR 421
[Close]
BLAST of Spo02525.1 vs. TAIR (Arabidopsis)
Match: AT1G76940.1 (RNA-binding (RRM/RBD/RNP motifs) family protein)

HSP 1 Score: 179.1 bits (453), Expect = 3.300e-45
Identity = 119/255 (46.67%), Postives = 154/255 (60.39%), Query Frame = 1 

		  

Query: 1   MSDQYWRYNDSRQPPAVSSLPVKRPRSEYDDPSGRDL----ASYYSREDDRVTQRAVRDT 60
           M+D YW  N  RQ       P+KRPRS+++ PS          YY R++D      V DT
Sbjct: 1   MADGYW--NQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGGGYYPRDEDL----DVPDT 60

Query: 61  ESINESYDRYLRNGQIYPGAD--SGRLPASGISSHADPRMGND--PRMGNDPRMGNDPR- 120
            +I  +YDRYL++ Q   G     GR    G     + +  +D   R G    + + P  
Sbjct: 61  RTIGSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGPNG 120

Query: 121 --MGNDPRMSGDPRMGRGSNLGSGRSEVPLPPDASSTLYVEGLPANCTRREVAHIFRPFV 180
             +G DP    +P +GR +          LP DAS+TLYVEGLP+NC+RREVAHIFRPFV
Sbjct: 121 HTIGFDPP---EP-VGRRN----------LPSDASNTLYVEGLPSNCSRREVAHIFRPFV 180

Query: 181 GYKEVRLVTKEARHSGGDPIVLCFVDFLSPAHAATALDALQGYKFDESDRDTAILRLQFA 240
           GY+EVRLVTK+++H  GDPIVLCFVDF +PA AATAL ALQGY+ DE++ D+  LRLQF+
Sbjct: 181 GYREVRLVTKDSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRLQFS 233

Query: 241 RYPGARSGGGHRGKR 245
           R PG+R   G RG+R
Sbjct: 241 RKPGSRP--GQRGRR 233
The following BLAST results are available for this feature:
BLAST of Spo02525.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902224181|gb|KNA19701.1|3.9e-13390.7hypothetical protein SOVF_0588... [more]
gi|731321484|ref|XP_010671379.1|1.7e-11277.8PREDICTED: uncharacterized pro... [more]
gi|359490723|ref|XP_002275189.2|3.9e-8062.5PREDICTED: uncharacterized pro... [more]
gi|731424490|ref|XP_010662904.1|6.6e-8062.7PREDICTED: uncharacterized pro... [more]
gi|645258032|ref|XP_008234694.1|6.2e-7864.1PREDICTED: U1 small nuclear ri... [more]
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BLAST of Spo02525.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RJL1_SPIOL2.7e-13390.7Uncharacterized protein OS=Spi... [more]
A0A0J8CQU1_BETVU1.2e-11277.8Uncharacterized protein OS=Bet... [more]
E0CV86_VITVI4.6e-8062.7Putative uncharacterized prote... [more]
M5X0S7_PRUPE5.6e-7865.3Uncharacterized protein OS=Pru... [more]
V4TRQ4_9ROSI8.1e-7763.9Uncharacterized protein OS=Cit... [more]
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BLAST of Spo02525.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RBP1_MEDTR7.4e-4747.6RNA-binding protein 1 OS=Medic... [more]
RBP2_MEDTR1.6e-4643.8RNA-binding protein 2 OS=Medic... [more]
NSRB_ARATH3.1e-4550.4Nuclear speckle RNA-binding pr... [more]
NSRA_ARATH5.8e-4446.6Nuclear speckle RNA-binding pr... [more]
MEG5_MAIZE6.7e-3270.3Protein MATERNALLY EXPRESSED G... [more]
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BLAST of Spo02525.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT1G21320.11.7e-4650.4nucleotide binding;nucleic aci... [more]
AT1G76940.13.3e-4546.6RNA-binding (RRM/RBD/RNP motif... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 147..216
score: 1.4
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 146..227
score: 8.
IPR000504RNA recognition motif domainPROFILEPS50102RRMcoord: 145..231
score: 1
IPR012677Nucleotide-binding alpha-beta plait domainGENE3D3.30.70.330coord: 138..230
score: 2.8
IPR012677Nucleotide-binding alpha-beta plait domainunknownSSF54928RNA-binding domain, RBDcoord: 102..216
score: 1.25
IPR024888U1 small nuclear ribonucleoprotein A/U2 small nuclear ribonucleoprotein B''PANTHERPTHR10501U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN Bcoord: 26..244
score: 5.0E
NoneNo IPR availablePANTHERPTHR10501:SF24SUBFAMILY NOT NAMEDcoord: 26..244
score: 5.0E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009651 response to salt stress
biological_process GO:0008152 metabolic process
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0009407 toxin catabolic process
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0051788 response to misfolded protein
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0017069 snRNA binding
molecular_function GO:0005515 protein binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004386 helicase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004298 threonine-type endopeptidase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo148490.84Barchart | Table
Spo056010.79Barchart | Table
Spo148710.79Barchart | Table
Spo131790.76Barchart | Table
Spo089050.75Barchart | Table
Spo209250.74Barchart | Table
Spo197220.74Barchart | Table
Spo085400.74Barchart | Table
Spo182440.74Barchart | Table
Spo098190.74Barchart | Table
Spo059080.73Barchart | Table
Spo134400.73Barchart | Table
Spo182690.72Barchart | Table
Spo092340.72Barchart | Table
Spo176970.72Barchart | Table
Spo185250.72Barchart | Table
Spo135160.72Barchart | Table
Spo087710.71Barchart | Table
Spo123940.71Barchart | Table
Spo157620.71Barchart | Table
Spo156030.71Barchart | Table
Spo224370.71Barchart | Table
Spo148560.71Barchart | Table
Spo058460.71Barchart | Table
Spo063430.70Barchart | Table
Spo010970.70Barchart | Table
Spo058740.70Barchart | Table
Spo066810.70Barchart | Table
Spo191240.70Barchart | Table
Spo056630.70Barchart | Table
Spo270440.69Barchart | Table
Spo188420.69Barchart | Table
Spo199150.69Barchart | Table
Spo042190.69Barchart | Table
Spo261720.69Barchart | Table
Spo263580.69Barchart | Table
Spo082720.69Barchart | Table
Spo241050.68Barchart | Table
Spo215950.68Barchart | Table
Spo236790.68Barchart | Table
Spo058490.68Barchart | Table
Spo071410.68Barchart | Table
Spo093510.68Barchart | Table
Spo097540.68Barchart | Table
Spo019140.68Barchart | Table
Spo110350.68Barchart | Table
Spo037160.68Barchart | Table
Spo139320.68Barchart | Table
Spo152700.68Barchart | Table
Spo189770.68Barchart | Table
Spo144470.67Barchart | Table
Spo158190.67Barchart | Table
Spo021190.67Barchart | Table
Spo168420.67Barchart | Table
Spo122550.67Barchart | Table
Spo112220.67Barchart | Table
Spo027310.67Barchart | Table
Spo181940.67Barchart | Table
Spo264820.67Barchart | Table
Spo057880.67Barchart | Table
Spo258560.67Barchart | Table
Spo241060.67Barchart | Table
Spo225380.67Barchart | Table
Spo196350.67Barchart | Table
Spo254970.67Barchart | Table
Spo153670.67Barchart | Table
Spo300230.66Barchart | Table
Spo019900.66Barchart | Table
Spo035090.66Barchart | Table
Spo051270.66Barchart | Table
Spo088120.66Barchart | Table
Spo098330.66Barchart | Table
Spo121520.66Barchart | Table
Spo138080.66Barchart | Table
Spo160730.66Barchart | Table
Spo181030.66Barchart | Table
Spo233450.66Barchart | Table
Spo249980.66Barchart | Table
Spo251040.66Barchart | Table
Spo252920.66Barchart | Table
Spo254450.66Barchart | Table
Spo267380.66Barchart | Table
Spo060300.65Barchart | Table
Spo189860.65Barchart | Table
Spo184510.65Barchart | Table
Spo174400.65Barchart | Table
Spo231920.65Barchart | Table
Spo192680.65Barchart | Table
Spo121950.65Barchart | Table
Spo084340.65Barchart | Table
Spo057530.65Barchart | Table