Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGCATTAGTGAAAGAGAGAGGAAGATGAGGTAATTGAAAAACAGAAAAAAGAGAAGGGAGAAGATAAGCACAACACAAGTGCACAAGTAGAGAAATTCCACCCACCCAAACATACCCTCTTCCAAAACCTAGACCCACGAAAAATAATAATTAAAATAAGAAAGAAAAAAAAAAGCATTAGTCTTTAAAATTGATAACTACCTCTTCTTCGATTCATTAGTCATTTCTCTCCACCGTCTTGTAAGTTTCTTTCTACACTCTCCCCCATACCCCCCTTTTGCTTTGCTTCTCAATCGTCAGATCATTATCTACTACTTCTACATAACCCAATATTGGCCAATTTAAAGCCCTAAAATTCCATTTTCTACACCCAAAAAAATAAAAATAAAAATAAAAATACCCATTATAAGATAGAAACAGAGGTCAGAAAATAAAATGGGAATAATGGAGCAGAGATCAGAAATAAGGAGAATGATTGAGGTTGATGAACATGGTGATGAACTAGATGAGAAGATTAAGTGGCCTATTTGGTTGAAACCTCTTCTTAAAACTAGCTTCTTTGGCCAATGTAAGATTCATCCTGATGCTCACAAGAGTGAATGTAATATGTATTGCTTGGATTGTATGGACGGAGCACTCTGTTCCGTATGCTTATCGTCTCACAAGGATCACCACGCTATTCAGGTATTATTTTTAGTCGGTTTTTTTTTATTAATGTTCAAATTAATTAGTGACAAATTTTGACTAATGTTATTGAGTGGTGATGGTAGTTGTTGTTTTTGGAACCGATCAACAATGTTCAAATAAATAAGAGCCCAATTTGAGTATATTACTGAATGGTTGTGGTAATTTGTCTTTGAAATCAGTCAAAGCCAGTTTCAGGTTCATACATTTGGTAGTGGTAATTTGCTTTTAGACGTTTTTCGTTAATGTTCAAATCAATTAGAGCCGAATTTGAGTTGTCGAATGATATCGATAACTATTTTGAAACCGATCATAATGTTCAAATCAATTAGAGCCGAATTTGAGTATACTACTGAGCTAGTAGTGGTAATTTGCATTTGAAATCAATCGACAATGGTGGTGGTGGTAATTGTTTTTTTAATATAAGGCGGTCGTCGTCTCAATCATTTTGGGGTTCTATGCTGATTTTGATCGTAGGGCGGCCGAGTGGCGGCGGCGTAAATGAATAATTTGGTAATTAAATGGTAGTAGTGGTAATTGTTTCCGTAATTGTGGCGGCGTAACGGTAATTAAATGGTAGTGGATTAGTGGTAATAGTTTCCGTAAAAGGCGGTTGTCGTCTAAGCCATTTTTGGGGGTTCTGTGCTAATTTTGATTGTAGGGCGGCCGAAGTGGCGGCGTAAATGAGAAACGATAATAAAGTGGTGGTGGTAATTGTTTTCAGATAAGGCGGTCGTCGTACCACGACGTAATAAGAGTAACGGAGATACAGAAGTATGTGGACATAGCAGGGATACAGACATACATTATCAACAGTGCGCGCATCGTGTTCTTGAATCAGCGGCCGCAGCCTCGCCCTGGTAAAGGCGTCACCAACACCTGCCTTGTCTGCCACCGCAGCCTTCTTGATTCCTTCTCCTTTTGCTCTCTTTCTTGCAAGGTTCGTTTTTCTCTCTCTTTTTCTTTTCTTTTCTTTTTTATTCCCTTTTTTTAACAATGTTGTCAATTTTATGTTTCTTTGTTAAGAAATTAATTTGTTGATCATGTTTTGTTCTATATCTGGCAATTAAGCATAATTAGTACTCCGTACAAATATAACAAACATCCAACATAAATTCAATCTTGGATTGCGTTTAAGGAGAAGGTATAAATGTACACTATCTCATCCGTAATCAATGTGAACTCCTGGGAAAGATCTGGGGTCAAATCTCGTCCATATTACCGCCCAAATCAAAAAATAAAAAAGAAAAATGATGTTCTGATAAATTTTAGGTAACATCATAGAAATGCTGAAGAACTGGATTTTAGTTTATCCTTGGCATATACTGGATTCCATTTTTTTTTTTGGGATAAGGGGAATTTTGTGATCAATGGCCGATGATTCGAGATAAAATGTGCTTGTTGGAGACGCGAATGAAGATGATTGTCCTCTCTAATTAGGACATTTAGATAACCTACCTGAATTAGATCACTCGAATATATTAATTTAGTTGATTAGGTAACGGAGGGCGGCGGCAGTTGCACAATCTAGGCAATTTGATCATCCACAACCACAAGCGTCTTATTCAACTAAGGTCACCTCACTTTTTGCTAACTATACTACTATAGTAAAGGTTGCTTATACTATTAAGCTTTTGACTTTTCCTCTTCAACCAATCTTGTTGTGACAACTCCATCATCATCTTTGATCATGACCTTTCCCAACTACACTAATACTCTTCTTGTCAATGTTGTTGCCTCGTCATCCATGGATTCTTGCTCTTTGTATGAGCATGACGGAAGCTTTTACAATCACTACAATGTTGTTTGTTATTTGTTGTTGTCGCGATGATAAATCAACAGTGTTGAATAAAGTTGAGATTGACTAATACATTTTGATCAATGGAAACATTTTCCTAGAATAATTGATATGTATGAGTACTTGTAGTAGTAGGTTAAAACGTAAGACTGAGGGTCTGTCTGTAATAGGTTTCAGGTACGAATCCCCCCATTGCACATTTGTAATTTATTTGCCCTTGTGACGTATTCGCACCCAAAAAGCTTGTAGTAGTAGGTCATGTTCTTTTCACCTGATTTTCACTGAACTACCTGCAATCAACTTTTGTTGATTCACTAACTTTTTGTGGATCAAGATCTGATTTACATTCCTGGTAAGGAATGTTGAATCAGTCAAAATTGCTTGTTCTTTCAACTGATCTTTCTCTTCTGTTTCATTTTACAGATAAATGGGACATCGAAGAACTTCTGGACCGATAAGAAGAGGAGGATCGGAGAAACAGGACAAACGAATTCAGACTCAGAAGAATCCTTGAACAATTATTACAATGATCAAGGGACTGTTGCTTATAACTATAATTACAGTTACAATTATAAGAAGAAGTTACAGAGTTTTACACCATCAACACCACCAAGAACAACTTCTGCAGGCTCATCCGGGGCAAGTTACAGGTCTGCCAAACGCAGGAAGGGGATACCGCACAGAGCTCCACTCGGGGCACTTCTCATACAGTACTGAATCGAAAGGTCTGATGAAACTTTTTACCGCGCTGCAATATTAATTACTACTACATCGTTGCCTGTTTAACACGATGGGATATACATACACTAGCTCCGTCTGTAAATTACACGAAACTAATAGAAGCCGCAGGTACTCCCTCTCGAGTATTGTATATGTACATAACTACATATTATAGGTAACGTAGTTAGAAAAAGACTTATAGAATATGAATAGAAGCAACATGTATTAAAGTTTTTAAGAGTTTTTTTTGGTTCTTTTGGTATACATAACACAAAGGTATATGTTTGATGTAAATACCGATATATATGTGATGTAACGGTGTAGGTAATGACGCGTGTTCGAATACGGGGAGGTTCTTTTTTCCTACTAAAGAAGGAAAAATGGAATAAATACTTGATACTAATGATATAATGTGAAATATCTTAATTAACATTATGATATGTTCTATGTATGAAGTTTGTATATAGTTGGGGATAATGAAAGTAACTTTGTTGTCATGTTTGACAAAAACAATATAATTGAAATGTGATTTGTGATTGAAAAGTATGTTATTGGTGGGAGGTGCAAGAAAAAGGAAGCACGCAAACTAGAAAGAAGGGGATAGAAGCAATTGAATTATATGGTGGTGTTATTTCATTGTTTTCTCTATTCTTTATCTAATTTACTCGGAGTTTTTGTACAATTGTACTTCAATGTGGAAAGATTATTTCATGTAGTCTGAGTTTTCTTTCCTTGACAAAATAATAATGAATAATAATGACAATAATGTGACCGTAGGTGATCAAAATTTCTCGTGAGAGTTGTTGGCTTGTATAGCTAAGACCATGTGCATCCTTG AGCATTAGTGAAAGAGAGAGGAAGATGAGGTAATTGAAAAACAGAAAAAAGAGAAGGGAGAAGATAAGCACAACACAAGTGCACAAGTAGAGAAATTCCACCCACCCAAACATACCCTCTTCCAAAACCTAGACCCACGAAAAATAATAATTAAAATAAGAAAGAAAAAAAAAAGCATTAGTCTTTAAAATTGATAACTACCTCTTCTTCGATTCATTAGTCATTTCTCTCCACCGTCTTGTAAGTTTCTTTCTACACTCTCCCCCATACCCCCCTTTTGCTTTGCTTCTCAATCGTCAGATCATTATCTACTACTTCTACATAACCCAATATTGGCCAATTTAAAGCCCTAAAATTCCATTTTCTACACCCAAAAAAATAAAAATAAAAATAAAAATACCCATTATAAGATAGAAACAGAGGTCAGAAAATAAAATGGGAATAATGGAGCAGAGATCAGAAATAAGGAGAATGATTGAGGTTGATGAACATGGTGATGAACTAGATGAGAAGATTAAGTGGCCTATTTGGTTGAAACCTCTTCTTAAAACTAGCTTCTTTGGCCAATGTAAGATTCATCCTGATGCTCACAAGAGTGAATGTAATATGTATTGCTTGGATTGTATGGACGGAGCACTCTGTTCCGTATGCTTATCGTCTCACAAGGATCACCACGCTATTCAGATAAGGCGGTCGTCGTACCACGACGTAATAAGAGTAACGGAGATACAGAAGTATGTGGACATAGCAGGGATACAGACATACATTATCAACAGTGCGCGCATCGTGTTCTTGAATCAGCGGCCGCAGCCTCGCCCTGGTAAAGGCGTCACCAACACCTGCCTTGTCTGCCACCGCAGCCTTCTTGATTCCTTCTCCTTTTGCTCTCTTTCTTGCAAGATAAATGGGACATCGAAGAACTTCTGGACCGATAAGAAGAGGAGGATCGGAGAAACAGGACAAACGAATTCAGACTCAGAAGAATCCTTGAACAATTATTACAATGATCAAGGGACTGTTGCTTATAACTATAATTACAGTTACAATTATAAGAAGAAGTTACAGAGTTTTACACCATCAACACCACCAAGAACAACTTCTGCAGGCTCATCCGGGGCAAGTTACAGGTCTGCCAAACGCAGGAAGGGGATACCGCACAGAGCTCCACTCGGGGCACTTCTCATACAGTACTGAATCGAAAGGTCTGATGAAACTTTTTACCGCGCTGCAATATTAATTACTACTACATCGTTGCCTGTTTAACACGATGGGATATACATACACTAGCTCCGTCTGTAAATTACACGAAACTAATAGAAGCCGCAGGTAATGACGCGTGTTCGAATACGGGGAGGTTCTTTTTTCCTACTAAAGAAGGAAAAATGGAATAAATACTTGATACTAATGATATAATGTGAAATATCTTAATTAACATTATGATATGTTCTATGTATGAAGTTTGTATATAGTTGGGGATAATGAAAGTAACTTTGTTGTCATGTTTGACAAAAACAATATAATTGAAATGTGATTTGTGATTGAAAAGTATGTTATTGGTGGGAGGTGCAAGAAAAAGGAAGCACGCAAACTAGAAAGAAGGGGATAGAAGCAATTGAATTATATGGTGGTGTTATTTCATTGTTTTCTCTATTCTTTATCTAATTTACTCGGAGTTTTTGTACAATTGTACTTCAATGTGGAAAGATTATTTCATGTAGTCTGAGTTTTCTTTCCTTGACAAAATAATAATGAATAATAATGACAATAATGTGACCGTAGGTGATCAAAATTTCTCGTGAGAGTTGTTGGCTTGTATAGCTAAGACCATGTGCATCCTTG ATGGGAATAATGGAGCAGAGATCAGAAATAAGGAGAATGATTGAGGTTGATGAACATGGTGATGAACTAGATGAGAAGATTAAGTGGCCTATTTGGTTGAAACCTCTTCTTAAAACTAGCTTCTTTGGCCAATGTAAGATTCATCCTGATGCTCACAAGAGTGAATGTAATATGTATTGCTTGGATTGTATGGACGGAGCACTCTGTTCCGTATGCTTATCGTCTCACAAGGATCACCACGCTATTCAGATAAGGCGGTCGTCGTACCACGACGTAATAAGAGTAACGGAGATACAGAAGTATGTGGACATAGCAGGGATACAGACATACATTATCAACAGTGCGCGCATCGTGTTCTTGAATCAGCGGCCGCAGCCTCGCCCTGGTAAAGGCGTCACCAACACCTGCCTTGTCTGCCACCGCAGCCTTCTTGATTCCTTCTCCTTTTGCTCTCTTTCTTGCAAGATAAATGGGACATCGAAGAACTTCTGGACCGATAAGAAGAGGAGGATCGGAGAAACAGGACAAACGAATTCAGACTCAGAAGAATCCTTGAACAATTATTACAATGATCAAGGGACTGTTGCTTATAACTATAATTACAGTTACAATTATAAGAAGAAGTTACAGAGTTTTACACCATCAACACCACCAAGAACAACTTCTGCAGGCTCATCCGGGGCAAGTTACAGGTCTGCCAAACGCAGGAAGGGGATACCGCACAGAGCTCCACTCGGGGCACTTCTCATACAGTACTGA MGIMEQRSEIRRMIEVDEHGDELDEKIKWPIWLKPLLKTSFFGQCKIHPDAHKSECNMYCLDCMDGALCSVCLSSHKDHHAIQIRRSSYHDVIRVTEIQKYVDIAGIQTYIINSARIVFLNQRPQPRPGKGVTNTCLVCHRSLLDSFSFCSLSCKINGTSKNFWTDKKRRIGETGQTNSDSEESLNNYYNDQGTVAYNYNYSYNYKKKLQSFTPSTPPRTTSAGSSGASYRSAKRRKGIPHRAPLGALLIQY Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo05128.1 vs. NCBI nr
Match: gi|902202850|gb|KNA14386.1| (hypothetical protein SOVF_107950 [Spinacia oleracea]) HSP 1 Score: 520.0 bits (1338), Expect = 2.300e-144 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1
BLAST of Spo05128.1 vs. NCBI nr
Match: gi|731320945|ref|XP_010671082.1| (PREDICTED: uncharacterized protein LOC104887983 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 435.6 bits (1119), Expect = 5.700e-119 Identity = 216/256 (84.38%), Postives = 229/256 (89.45%), Query Frame = 1
BLAST of Spo05128.1 vs. NCBI nr
Match: gi|255558091|ref|XP_002520074.1| (PREDICTED: uncharacterized protein LOC8280509 isoform X1 [Ricinus communis]) HSP 1 Score: 310.8 bits (795), Expect = 2.100e-81 Identity = 156/234 (66.67%), Postives = 180/234 (76.92%), Query Frame = 1
BLAST of Spo05128.1 vs. NCBI nr
Match: gi|571486692|ref|XP_006590432.1| (PREDICTED: uncharacterized protein LOC100792668 isoform X1 [Glycine max]) HSP 1 Score: 309.3 bits (791), Expect = 6.200e-81 Identity = 155/244 (63.52%), Postives = 190/244 (77.87%), Query Frame = 1
BLAST of Spo05128.1 vs. NCBI nr
Match: gi|356538425|ref|XP_003537704.1| (PREDICTED: uncharacterized protein LOC100792668 isoform X2 [Glycine max]) HSP 1 Score: 309.3 bits (791), Expect = 6.200e-81 Identity = 155/244 (63.52%), Postives = 190/244 (77.87%), Query Frame = 1
BLAST of Spo05128.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4F7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_107950 PE=4 SV=1) HSP 1 Score: 520.0 bits (1338), Expect = 1.600e-144 Identity = 252/252 (100.00%), Postives = 252/252 (100.00%), Query Frame = 1
BLAST of Spo05128.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSC6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g049560 PE=4 SV=1) HSP 1 Score: 435.6 bits (1119), Expect = 4.000e-119 Identity = 216/256 (84.38%), Postives = 229/256 (89.45%), Query Frame = 1
BLAST of Spo05128.1 vs. UniProtKB/TrEMBL
Match: B9S255_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1327780 PE=4 SV=1) HSP 1 Score: 310.8 bits (795), Expect = 1.500e-81 Identity = 156/234 (66.67%), Postives = 180/234 (76.92%), Query Frame = 1
BLAST of Spo05128.1 vs. UniProtKB/TrEMBL
Match: A0A0B2RSB9_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_004920 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 4.300e-81 Identity = 155/244 (63.52%), Postives = 190/244 (77.87%), Query Frame = 1
BLAST of Spo05128.1 vs. UniProtKB/TrEMBL
Match: I1LFX0_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_11G008900 PE=4 SV=1) HSP 1 Score: 309.3 bits (791), Expect = 4.300e-81 Identity = 155/244 (63.52%), Postives = 190/244 (77.87%), Query Frame = 1
BLAST of Spo05128.1 vs. TAIR (Arabidopsis)
Match: AT1G32700.1 (PLATZ transcription factor family protein) HSP 1 Score: 268.5 bits (685), Expect = 4.300e-72 Identity = 141/233 (60.52%), Postives = 169/233 (72.53%), Query Frame = 1
BLAST of Spo05128.1 vs. TAIR (Arabidopsis)
Match: AT4G17900.1 (PLATZ transcription factor family protein) HSP 1 Score: 266.5 bits (680), Expect = 1.600e-71 Identity = 140/251 (55.78%), Postives = 172/251 (68.53%), Query Frame = 1
BLAST of Spo05128.1 vs. TAIR (Arabidopsis)
Match: AT1G21000.1 (PLATZ transcription factor family protein) HSP 1 Score: 208.4 bits (529), Expect = 5.200e-54 Identity = 110/244 (45.08%), Postives = 149/244 (61.07%), Query Frame = 1
BLAST of Spo05128.1 vs. TAIR (Arabidopsis)
Match: AT5G46710.1 (PLATZ transcription factor family protein) HSP 1 Score: 203.8 bits (517), Expect = 1.300e-52 Identity = 108/221 (48.87%), Postives = 142/221 (64.25%), Query Frame = 1
BLAST of Spo05128.1 vs. TAIR (Arabidopsis)
Match: AT1G76590.1 (PLATZ transcription factor family protein) HSP 1 Score: 200.3 bits (508), Expect = 1.400e-51 Identity = 108/243 (44.44%), Postives = 148/243 (60.91%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo05128.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo05128.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo05128.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo05128.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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