Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGGACAATGAGCGTCGACATTACCAAAAGCTTCCAACCTGCCTACGATCGCGTAAAAGAGCTCAAAGCATTCGACGATACAAAGTCGGGTGTAAAAGGAATAGTAGACTCAGGTGCACAAACTGTCCCGAGGATATTCATTCGTCCCACTGACGAGCTCTCAGAAGACCTGAATCATCCCTCAGTAAAACGCCAAGTCCCTGTAATAAGTTTCAATGGCATTGATGGTACGAAAGAGAGGTACGACGATATTGTCAAACAAGTGTTGTGTGCAGCTGAAACTTGGGGTTTCTTTCAAGTGGTTGATCATGGAATCCCAATTGAAGTTTTGGATAAGATGCTGCATGGAATTCGGATGTTTCATGAGCAGGATAATGAGGTTAAGAAGGAGTTCTATGGTCGTGTGTTGTCGAATCCAGTTGTGTTTATGAGCAACTATGATCTTTATAAGTCAAAGGCTGCTAATTGGAGGGATAGTTTGGTTATTAATAAGTCTGATTCTGGGCATCTTGATCCTCAGGGATTACCTGAAATATGCAGGTATATATGGTCATTTATCTTACACCTAGAGCGAGATGCATCCAATGATTCTTTTCCACTCATTTAATTTGATCAAATGAAGGAAAAAGATTGGGTGTAATTTTAGGTACACCTGGGTAGATGATTATCCTCTAAAATGGGTGGATCGGGTAAATTAATATGAAAACTGATTTTGGCACATCTGTAATTTCTTTAAACCCAAATCTACACAAGTAAAGCATAAAAATGTGTGCTCTATGTAATGCTGGTGCAAAAATCATTACTAAGGTTTCGTTCTATTGGACTTATTTTGACTGAACTCATATTATTTGAATTTATCTAAACTTAACTTAATTTATCTGAATAAAACTTATTTTGTCTGAAATAAACTTATTTGTGTGTGAAAACATCTGGAAAAAACTTATTTTTGCTGAACTTATATTATCTTAACTTAACTAAACTTATCTGAACTTATTTTGTCTGAAATAAACTTATTTGTGTGTGAAAACATCTGGAAAAAAACTTATTTTTGCTGAACTTATATTATCTTAACTTAACTAAACTTATCTGAACTTATTTTATCTGAAATAAGTCAAAATTAATCAAACAGACAGAGCCTTATACTACTTCGTACTTGGTATATATGAGTTATTATTGTTTTTTTTGTTTGTGTCTTTAATATCACGTATTCACGTATTATCATATACTCCCTCCGTCCCTTAATACTCGCACCGTTTTGACTAGACACGCTTGCCAATGCATAACTTTGACCACCAATATTTTTAACTACATATTATAAAAACTTATAAAAATATTAATATTTTGAAAATATATATTTAGATGAAGCCAACAATGTATTATATACTAACATTTATTTTCATATGCTATAAATCAAAGTGAATTATGTGAATAGTGTAAAAAGTCAAAACGGTGCGAGTATTAAGGGACAGAGGGAGTAATATTAATGTTTCATGTTAATAAATTCCATTGTTTTAGTGAAATTCCATTGATATAATTTGTTTATATACAGAATGCAAAGACTATAACATAGTCAAATTAACCAATTATATTTTCGTTATAATTCATAATTTAATTTAAGGTCGTAATTTTGAAGAATTGGCCTTGTAAATTGATATTTTGATTGATTTTTGTTGTAGGGACGTAATTCAAGAATACAGTAATCATGTAAAGAATTTAAGTGACGTTATATTGCGATTACTATCTGTAGCTCTTGGACTCAAACCAGAACATCTAAAAGAAACAGAATGTGGCGAAGGATGGACCTTAACAAACCATTACTACCCTGCTTGCCCTGCTCCAGAATTGACAATGGGGACGAGCAAACACTCTGATCCCTCATTCCTCACTATACTTTTACAAGACCAAATCGGTGGTCTCCAAGTTTTCAATGAAAATCAGTGGGTTGACATTCAGCCTATTCCTGGTGCCTTTGTCGTAAATATTGGAGATATGCTTCAGGTATACTTTTTTTTTTTTTTTTAATTTTTTATAAAGAAGAACAATATCATGATAAAATGGATCTGTGTACCACAGATGTATAGAAAATACATTACGGTTATGATCACAACAATTACTGTTATAACACAACTCGTACTCTACCGCTTCTAACTTGACGTGAATATTGATTTTTGATGTTTTCGTCTCTTTCCATGTAGAGTCATTCACAATTTGCGCACAAATTTTCCGATCGTCGAGTTGATGATAAACCTTCCCTATTATTGAAACCCTCAAAATAGAATTCTCATCCTACGAGTAGGGGTGTTCATCGGTCAAAACCCGGACCGGACCGGACCGACCCGGACCGGACCGAAGACCGAAATTTGATAATTTGAGACCCAAAGACCGGACCGATTATGCTTGGACCGAACCCGGACCGGACCGATAAAATCGGTCCAAAACCCGGACCGGACCGATTTGGACCGGTTGTAGACCTTTTTCTATTTATTTTTTTATTTTTCTAAAAATTATGGTAAAAAAGAAAAAATATATATAAAAAAATCAATTTTTTAAGGCCTTTTTTGAAAGCTAAAATAAAACATATCACAATATAATAATATTTACAACATATTAAAGGAGAGAATTAGCTTTTTAAGTATTTTTTATTATATTTTATTAAGAAAAAATCGGTCCGGTCCAAAATCGGGTTTTGGACCGGACCAGACCGGACCGGACCGAAGACCGGAAATTGATATTTCTCGACCGATGACCGGACCGATTGTCTTTGGTCCGGTCTGGTCCGGTCTGGTCCGGTCTGGGTCGGTCCGGTCCGGTCTGGTCCGGTCTGGGTCGGTCCGGTCCGGTCCAATTTTTGCACACCCCTACCTACGAGGGAGGGGGACATAACCTGAAGAGCAAACAATAGAAAGAACAATAAGAAATGTCAAAAATAGTCTAATTTACGAAGAAATCAGACTACTTCCAACATAAACAACCAAGAAAACTGAAAACCTAGAAGATGAGAGAGAATATAGTTATATGTTGAGAAATGATAATGTCTTCGTTACAATTAAAAATAAATATTAAACTTACAAATATATCTATAGTTCTATACTAATATTTTAAAGCACAATGTTTGCATAAAATGATGTCGATCACGTGTCGTCTCTTCTATATTATTTTATTTTGTTGTTAAATCACAATTATATTCATCCTTTTAACTTTTCCTCCTTAATTAGATATTCATTTTATTTCAAAATTAATTTTATTTGTTTCACATTCTAAGTTCAATTTCATTATACTCCCTTTGCTTCACATTTTATTATTTCGAAATTTTTGTATATATCCTACTTTATAGTATTACGTAAACGATGTAATTGGGTTTTTGAATTAAGAAACTCGTGCATCGCACGGGATAAAAACTAGTTGAATTCAATAGGAAATGATATGGCTTTCATTTTGGAGGTGTTTCAGGTATACTTAAGCTAGCAGGTTCAAGTGTACTCGATCGATAACAAGAAGATTTTGTTTTTTTTCCGTGAATAAGCTCATTGAAACTAGTTGTCTAATTTATAGTCTTTTTGATGCAGATCATATCCAACGATAAGCTTAAGAGTGTTAACCACAGAGTAATTGCTAATCTTGTCGGACCAAGGATTTCAGTAGGATTATTTCTCAGAGGCTAAACCTTGCCCCAAATGTCTGCAGACCATCTGCACAAGTTTTCTTTTTGCGGCCGGCATAGATCTCATGAGACCCGCCTGGGAATTGGTTTCGCCCGAAGCATCGTTTTTTCATCTCCAAAGTTGTACGAACCTATTGAAGAACTATTGTGTGATGAAAGTGCTCCGATTTATAAGAATTTCACTCTTAATGAATTTAAGGCGAACTTTTTCACTCGACCCCTTGATCAACCGGGATTTCAATTCTTCAAGCTAAAAAATCAAGGTGATGGAGAGTAGAGAGAACACCATTTCCTATGTTGATGCGTGCAACATCATGGTTATTCTTGAATTAATGTTTAAGAGTCATGTTTTTTTTAGCTAACACGTTGTTTTTAGTGGTTTTAGCTCATGCTTGTGTTAGGTATTTATTTTCATGTGATTCAATTCCTAACTTGTTTAGGATTTGTATTTTTTGATTTTCAATTCCTAACTTGTTGGTTTGGCTTGAAACGATCACGTAGAGATATTTGTCGCATATTCTTGTCTCTGTCAGTGAGCAACAACAAGACATATTTTTTGTTGGCGTTGTTGCACTAGATCTGTATGTACGTGATGTGTGCGTATGTGTTTTATAATAGTAAATAAAAAAGTTAAA ATGGGGACAATGAGCGTCGACATTACCAAAAGCTTCCAACCTGCCTACGATCGCGTAAAAGAGCTCAAAGCATTCGACGATACAAAGTCGGGTGTAAAAGGAATAGTAGACTCAGGTGCACAAACTGTCCCGAGGATATTCATTCGTCCCACTGACGAGCTCTCAGAAGACCTGAATCATCCCTCAGTAAAACGCCAAGTCCCTGTAATAAGTTTCAATGGCATTGATGGTACGAAAGAGAGGTACGACGATATTGTCAAACAAGTGTTGTGTGCAGCTGAAACTTGGGGTTTCTTTCAAGTGGTTGATCATGGAATCCCAATTGAAGTTTTGGATAAGATGCTGCATGGAATTCGGATGTTTCATGAGCAGGATAATGAGGTTAAGAAGGAGTTCTATGGTCGTGTGTTGTCGAATCCAGTTGTGTTTATGAGCAACTATGATCTTTATAAGTCAAAGGCTGCTAATTGGAGGGATAGTTTGGTTATTAATAAGTCTGATTCTGGGCATCTTGATCCTCAGGGATTACCTGAAATATGCAGGGACGTAATTCAAGAATACAGTAATCATGTAAAGAATTTAAGTGACGTTATATTGCGATTACTATCTGTAGCTCTTGGACTCAAACCAGAACATCTAAAAGAAACAGAATGTGGCGAAGGATGGACCTTAACAAACCATTACTACCCTGCTTGCCCTGCTCCAGAATTGACAATGGGGACGAGCAAACACTCTGATCCCTCATTCCTCACTATACTTTTACAAGACCAAATCGGTGGTCTCCAAGTTTTCAATGAAAATCAGTGGGTTGACATTCAGCCTATTCCTGGTGCCTTTGTCGTAAATATTGGAGATATGCTTCAGATCATATCCAACGATAAGCTTAAGAGTGTTAACCACAGAGTAATTGCTAATCTTGTCGGACCAAGGATTTCAGTAGGATTATTTCTCAGAGGCTAAACCTTGCCCCAAATGTCTGCAGACCATCTGCACAAGTTTTCTTTTTGCGGCCGGCATAGATCTCATGAGACCCGCCTGGGAATTGGTTTCGCCCGAAGCATCGTTTTTTCATCTCCAAAGTTGTACGAACCTATTGAAGAACTATTGTGTGATGAAAGTGCTCCGATTTATAAGAATTTCACTCTTAATGAATTTAAGGCGAACTTTTTCACTCGACCCCTTGATCAACCGGGATTTCAATTCTTCAAGCTAAAAAATCAAGGTGATGGAGAGTAGAGAGAACACCATTTCCTATGTTGATGCGTGCAACATCATGGTTATTCTTGAATTAATGTTTAAGAGTCATGTTTTTTTTAGCTAACACGTTGTTTTTAGTGGTTTTAGCTCATGCTTGTGTTAGGTATTTATTTTCATGTGATTCAATTCCTAACTTGTTTAGGATTTGTATTTTTTGATTTTCAATTCCTAACTTGTTGGTTTGGCTTGAAACGATCACGTAGAGATATTTGTCGCATATTCTTGTCTCTGTCAGTGAGCAACAACAAGACATATTTTTTGTTGGCGTTGTTGCACTAGATCTGTATGTACGTGATGTGTGCGTATGTGTTTTATAATAGTAAATAAAAAAGTTAAA ATGGGGACAATGAGCGTCGACATTACCAAAAGCTTCCAACCTGCCTACGATCGCGTAAAAGAGCTCAAAGCATTCGACGATACAAAGTCGGGTGTAAAAGGAATAGTAGACTCAGGTGCACAAACTGTCCCGAGGATATTCATTCGTCCCACTGACGAGCTCTCAGAAGACCTGAATCATCCCTCAGTAAAACGCCAAGTCCCTGTAATAAGTTTCAATGGCATTGATGGTACGAAAGAGAGGTACGACGATATTGTCAAACAAGTGTTGTGTGCAGCTGAAACTTGGGGTTTCTTTCAAGTGGTTGATCATGGAATCCCAATTGAAGTTTTGGATAAGATGCTGCATGGAATTCGGATGTTTCATGAGCAGGATAATGAGGTTAAGAAGGAGTTCTATGGTCGTGTGTTGTCGAATCCAGTTGTGTTTATGAGCAACTATGATCTTTATAAGTCAAAGGCTGCTAATTGGAGGGATAGTTTGGTTATTAATAAGTCTGATTCTGGGCATCTTGATCCTCAGGGATTACCTGAAATATGCAGGGACGTAATTCAAGAATACAGTAATCATGTAAAGAATTTAAGTGACGTTATATTGCGATTACTATCTGTAGCTCTTGGACTCAAACCAGAACATCTAAAAGAAACAGAATGTGGCGAAGGATGGACCTTAACAAACCATTACTACCCTGCTTGCCCTGCTCCAGAATTGACAATGGGGACGAGCAAACACTCTGATCCCTCATTCCTCACTATACTTTTACAAGACCAAATCGGTGGTCTCCAAGTTTTCAATGAAAATCAGTGGGTTGACATTCAGCCTATTCCTGGTGCCTTTGTCGTAAATATTGGAGATATGCTTCAGATCATATCCAACGATAAGCTTAAGAGTGTTAACCACAGAGTAATTGCTAATCTTGTCGGACCAAGGATTTCAGTAGGATTATTTCTCAGAGGCTAA MGTMSVDITKSFQPAYDRVKELKAFDDTKSGVKGIVDSGAQTVPRIFIRPTDELSEDLNHPSVKRQVPVISFNGIDGTKERYDDIVKQVLCAAETWGFFQVVDHGIPIEVLDKMLHGIRMFHEQDNEVKKEFYGRVLSNPVVFMSNYDLYKSKAANWRDSLVINKSDSGHLDPQGLPEICRDVIQEYSNHVKNLSDVILRLLSVALGLKPEHLKETECGEGWTLTNHYYPACPAPELTMGTSKHSDPSFLTILLQDQIGGLQVFNENQWVDIQPIPGAFVVNIGDMLQIISNDKLKSVNHRVIANLVGPRISVGLFLRG Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo19028.1 vs. NCBI nr
Match: gi|902193718|gb|KNA12366.1| (hypothetical protein SOVF_126630 [Spinacia oleracea]) HSP 1 Score: 506.5 bits (1303), Expect = 3.300e-140 Identity = 241/321 (75.08%), Postives = 276/321 (85.98%), Query Frame = 1
BLAST of Spo19028.1 vs. NCBI nr
Match: gi|731320911|ref|XP_010671064.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 460.3 bits (1183), Expect = 2.700e-126 Identity = 218/320 (68.12%), Postives = 265/320 (82.81%), Query Frame = 1
BLAST of Spo19028.1 vs. NCBI nr
Match: gi|731320909|ref|XP_010671062.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 457.6 bits (1176), Expect = 1.800e-125 Identity = 218/319 (68.34%), Postives = 263/319 (82.45%), Query Frame = 1
BLAST of Spo19028.1 vs. NCBI nr
Match: gi|870865602|gb|KMT16652.1| (hypothetical protein BVRB_3g049380 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 455.7 bits (1171), Expect = 6.800e-125 Identity = 214/309 (69.26%), Postives = 257/309 (83.17%), Query Frame = 1
BLAST of Spo19028.1 vs. NCBI nr
Match: gi|731320907|ref|XP_010671061.1| (PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 453.8 bits (1166), Expect = 2.600e-124 Identity = 217/320 (67.81%), Postives = 261/320 (81.56%), Query Frame = 1
BLAST of Spo19028.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R0P2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_126630 PE=3 SV=1) HSP 1 Score: 506.5 bits (1303), Expect = 2.300e-140 Identity = 241/321 (75.08%), Postives = 276/321 (85.98%), Query Frame = 1
BLAST of Spo19028.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FL62_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g049370 PE=3 SV=1) HSP 1 Score: 460.3 bits (1183), Expect = 1.900e-126 Identity = 218/320 (68.12%), Postives = 265/320 (82.81%), Query Frame = 1
BLAST of Spo19028.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CSR1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g049380 PE=3 SV=1) HSP 1 Score: 455.7 bits (1171), Expect = 4.700e-125 Identity = 214/309 (69.26%), Postives = 257/309 (83.17%), Query Frame = 1
BLAST of Spo19028.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CXI6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_3g049390 PE=3 SV=1) HSP 1 Score: 453.8 bits (1166), Expect = 1.800e-124 Identity = 217/320 (67.81%), Postives = 261/320 (81.56%), Query Frame = 1
BLAST of Spo19028.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYM3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_126620 PE=3 SV=1) HSP 1 Score: 449.5 bits (1155), Expect = 3.400e-123 Identity = 208/304 (68.42%), Postives = 257/304 (84.54%), Query Frame = 1
BLAST of Spo19028.1 vs. ExPASy Swiss-Prot
Match: DV4H_CATRO (Deacetoxyvindoline 4-hydroxylase OS=Catharanthus roseus GN=D4H PE=1 SV=2) HSP 1 Score: 339.7 bits (870), Expect = 3.400e-92 Identity = 163/305 (53.44%), Postives = 221/305 (72.46%), Query Frame = 1
BLAST of Spo19028.1 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 6.800e-85 Identity = 153/302 (50.66%), Postives = 200/302 (66.23%), Query Frame = 1
BLAST of Spo19028.1 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 3 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1) HSP 1 Score: 315.5 bits (807), Expect = 6.800e-85 Identity = 153/308 (49.68%), Postives = 205/308 (66.56%), Query Frame = 1
BLAST of Spo19028.1 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1) HSP 1 Score: 304.7 bits (779), Expect = 1.200e-81 Identity = 149/308 (48.38%), Postives = 201/308 (65.26%), Query Frame = 1
BLAST of Spo19028.1 vs. ExPASy Swiss-Prot
Match: ACH11_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 11 OS=Arabidopsis thaliana GN=At5g59530 PE=2 SV=1) HSP 1 Score: 299.7 bits (766), Expect = 3.900e-80 Identity = 149/304 (49.01%), Postives = 200/304 (65.79%), Query Frame = 1
BLAST of Spo19028.1 vs. TAIR (Arabidopsis)
Match: AT1G06650.2 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 315.5 bits (807), Expect = 3.800e-86 Identity = 153/308 (49.68%), Postives = 205/308 (66.56%), Query Frame = 1
BLAST of Spo19028.1 vs. TAIR (Arabidopsis)
Match: AT1G06620.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 315.5 bits (807), Expect = 3.800e-86 Identity = 153/302 (50.66%), Postives = 200/302 (66.23%), Query Frame = 1
BLAST of Spo19028.1 vs. TAIR (Arabidopsis)
Match: AT1G06640.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 304.7 bits (779), Expect = 6.800e-83 Identity = 149/308 (48.38%), Postives = 201/308 (65.26%), Query Frame = 1
BLAST of Spo19028.1 vs. TAIR (Arabidopsis)
Match: AT5G59530.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 299.7 bits (766), Expect = 2.200e-81 Identity = 149/304 (49.01%), Postives = 200/304 (65.79%), Query Frame = 1
BLAST of Spo19028.1 vs. TAIR (Arabidopsis)
Match: AT1G04350.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 298.9 bits (764), Expect = 3.700e-81 Identity = 148/304 (48.68%), Postives = 202/304 (66.45%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo19028.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo19028.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo19028.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo19028.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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