Spo14354 (gene)

Overview
NameSpo14354
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr3 : 12165769 .. 12167746 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGATCATTGATTTGGGGGGAGGCCGTCTACAGCCATATAGTATATGGGATACAGTACCCAATATAGAGGATAATTTAGACAATTCACATTTGCTGACTGGGATATGCACTAAACTCTGGGTGACTGGGACTGGATGATTGGCAGTGTTTGGTGACTAGGAATGATTGTATACGTATATTATACACTTTCGAATACGTATACCCTTTCAAAAAACAACAGAAGGGTCTGAACTCTGAAGAGGAAGAGAGAGAAAACGACTGTCCTCTGTAAAGAGAGAAAAAACTCCAGATTAACTTGCAACTCCACTGCCATTCTCGCCGTTGTTCTGCCACCGGAATCGAGCTCCGAGAACGTCGTCACATTAGCAGTGCTGATTTCTGAGGAGAGAAAACCCTTGAAAAAGAAGATCGCTGGAAATTTTTTAAAGCTCGAAGGTAATTGGAATTGAGTTATTTTTGAGAAATTCTAGGGTTAATTAGGATTCAACATTATAGTAGCTCGTGTGATTTTAGAGAAAATCTTGTTTTTTTTTCCTGCATATAGCTGGTAAATCTGATTTTTTAAGCATAATATTAGGGTTTCGCATATTTTCATTGTTGTTTATCGATTGGAATTTTCTGAATCATTTTTGTTTTTCTTAGTGTAATTTGAAATTTTGAATGTTTTATAGTCTTGATACTGTGATTATGGTGATAGTTGTGATGATTTTTGGTTGATTGGTGATGGAAAATTGCACAAATTGCGTTTTTGGAAGGGTTAGGAGTAACTTGTTTTTAGAGTGGGATTGAAGAGTGGATTGGAGGTATCCTAACCCTTGATTAATTTCATTCATTTTGCATTTTTGGTTTGCAATTGTGCGCAGATTACTAAGGAATCAAGTATCCTCTATCAAATATTTTGAGATATCTGCTGCAATATTTTGAGATATCTCAAGTTGCATATCTTTATCCAATAAAGACCTTGATTGGTGCAACTCAAGAGCTTGAACTTGATTCATTTCCGGGTGGGAGCAGACTATGTACTGTTTCTTTGGTATCCCAGTAGAATATTTGATTATTCGAGTGCTTAAAGAAAAATTGTGTGTGTGTTGCAACTCTCTGGCTAAGAAATGTAGCTGCAACTCTCCAGCTACTACAAAATGTTTTAAATTTCTATTACTATTGGACGTGTGTGTGTTTTAGAGGTGGGGGGGTTGATGATTTAAGGAAGATACTTGAGTTCCAATGTTTTCTTTAATCGGGAATTTGGTTTGGCGCCATAAAGAAGGGGGTGGAGTAAGTTCTCTTATATAACTTTTATTGGTACCAATTCAGCAAATTAGCTTTTGCTTAATTCTACCCTTGCATTCTGATATCCTTCTTGTAGTTGGATACTATCTTGTTAGTATCTTAAATCTGCAATATGAAACTTTTTTGTTCCTCATTTTCTGCGCATTTTGCAGATTTTTTTACCCTATGTTTAATTGTTGTTAATATGCAGGGACTTCCAACCGCCTCCAATAAGATCTTCGATACCAGAAAATTAGGGTTGATGTTCTTCCCCAATTTATGCCTCGAAAATCCAAATCAGAATTAAGCCCATTTTGAAGTTATTTCATTGATTGTCGGAATCATAATAGAGAATCGGTTGATGGAGCGCGGGAACTTGAGCTGGGTACGAAGGTTTTGGAACAATGGAGTTTTTTTGAGATTGAAGAACACGGTGAAGAACTGAAGAAAAGGAGGGAGATTGGAGAAAGGAAGGGGAAAATCACGTCGTATTGATGTTGTATTCCTTTTGTATTCCTAATGATATACGTATTCTATTTGCCATATCTTGCATAGCCAACTCACTCTTTCTCTTACCTAGTCATATACTATTGCCTAGTAAGAAACTAATTTATTTTTATTTTTTAATAAAATATTATTATTATATGCTATATTGGGTACTGTAGCCCCATATATTATGGGCTAATACTTCCTCATTTGTGGGTGG

mRNA sequence

ATGATGATCATTGATTTGGGGGGAGGCCGTCTACAGCCATATAGTATATGGGATACAGTACCCAATATAGAGGATAATTTAGACAATTCACATTTGCTGACTGGGATATGCACTAAACTCTGGAGGAAGAGAGAGAAAACGACTGTCCTCTGTAAAGAGAGAAAAAACTCCAGATTAACTTGCAACTCCACTGCCATTCTCGCCGTTGTTCTGCCACCGGAATCGAGCTCCGAGAACGTCGTCACATTAGCAGTGCTGATTTCTGAGGAGAGAAAACCCTTGAAAAAGAAGATCGCTGGAAATTTTTTAAAGCTCGAAGGGACTTCCAACCGCCTCCAATAAGATCTTCGATACCAGAAAATTAGGGTTGATGTTCTTCCCCAATTTATGCCTCGAAAATCCAAATCAGAATTAAGCCCATTTTGAAGTTATTTCATTGATTGTCGGAATCATAATAGAGAATCGGTTGATGGAGCGCGGGAACTTGAGCTGGGTACGAAGGTTTTGGAACAATGGAGTTTTTTTGAGATTGAAGAACACGGTGAAGAACTGAAGAAAAGGAGGGAGATTGGAGAAAGGAAGGGGAAAATCACGTCGTATTGATGTTGTATTCCTTTTGTATTCCTAATGATATACGTATTCTATTTGCCATATCTTGCATAGCCAACTCACTCTTTCTCTTACCTAGTCATATACTATTGCCTAGTAAGAAACTAATTTATTTTTATTTTTTAATAAAATATTATTATTATATGCTATATTGGGTACTGTAGCCCCATATATTATGGGCTAATACTTCCTCATTTGTGGGTGG

Coding sequence (CDS)

ATGATGATCATTGATTTGGGGGGAGGCCGTCTACAGCCATATAGTATATGGGATACAGTACCCAATATAGAGGATAATTTAGACAATTCACATTTGCTGACTGGGATATGCACTAAACTCTGGAGGAAGAGAGAGAAAACGACTGTCCTCTGTAAAGAGAGAAAAAACTCCAGATTAACTTGCAACTCCACTGCCATTCTCGCCGTTGTTCTGCCACCGGAATCGAGCTCCGAGAACGTCGTCACATTAGCAGTGCTGATTTCTGAGGAGAGAAAACCCTTGAAAAAGAAGATCGCTGGAAATTTTTTAAAGCTCGAAGGGACTTCCAACCGCCTCCAATAA

Protein sequence

MMIIDLGGGRLQPYSIWDTVPNIEDNLDNSHLLTGICTKLWRKREKTTVLCKERKNSRLTCNSTAILAVVLPPESSSENVVTLAVLISEERKPLKKKIAGNFLKLEGTSNRLQ
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo14354.1Spo14354.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo14354.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14354.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14354.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo14354.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0000226 microtubule cytoskeleton organization
biological_process GO:0006979 response to oxidative stress
biological_process GO:0030091 protein repair
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006464 cellular protein modification process
biological_process GO:0007020 microtubule nucleation
biological_process GO:0051090 regulation of DNA-binding transcription factor activity
biological_process GO:0006508 proteolysis
biological_process GO:0009698 phenylpropanoid metabolic process
biological_process GO:0006768 biotin metabolic process
biological_process GO:0007165 signal transduction
biological_process GO:0009651 response to salt stress
biological_process GO:0042908 xenobiotic transport
biological_process GO:0006888 ER to Golgi vesicle-mediated transport
biological_process GO:0043090 amino acid import
biological_process GO:0071554 cell wall organization or biogenesis
biological_process GO:0009658 chloroplast organization
biological_process GO:0006457 protein folding
biological_process GO:0006855 drug transmembrane transport
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0000911 cytokinesis by cell plate formation
biological_process GO:0030007 cellular potassium ion homeostasis
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0000325 plant-type vacuole
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0000785 chromatin
cellular_component GO:0005634 nucleus
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0003682 chromatin binding
molecular_function GO:0004077 biotin-[acetyl-CoA-carboxylase] ligase activity
molecular_function GO:0008281 sulfonylurea receptor activity
molecular_function GO:0008113 peptide-methionine (S)-S-oxide reductase activity
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008559 xenobiotic transmembrane transporting ATPase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0043621 protein self-association
molecular_function GO:0003756 protein disulfide isomerase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003677 DNA binding
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo168010.72Barchart | Table
Spo005260.72Barchart | Table
Spo155240.72Barchart | Table
Spo233320.71Barchart | Table
Spo084070.70Barchart | Table
Spo153170.70Barchart | Table
Spo243310.70Barchart | Table
Spo026650.70Barchart | Table
Spo233820.70Barchart | Table
Spo192170.69Barchart | Table
Spo211580.69Barchart | Table
Spo109650.69Barchart | Table
Spo126090.69Barchart | Table
Spo011870.68Barchart | Table
Spo259850.68Barchart | Table
Spo144520.68Barchart | Table
Spo108350.68Barchart | Table
Spo241330.68Barchart | Table
Spo129540.68Barchart | Table
Spo250080.68Barchart | Table
Spo016280.68Barchart | Table
Spo123320.68Barchart | Table
Spo201060.68Barchart | Table
Spo209120.68Barchart | Table
Spo094340.67Barchart | Table
Spo012520.67Barchart | Table
Spo019250.67Barchart | Table
Spo051350.67Barchart | Table
Spo076850.67Barchart | Table
Spo094270.67Barchart | Table
Spo002050.67Barchart | Table
Spo097690.67Barchart | Table
Spo112850.67Barchart | Table
Spo116880.67Barchart | Table
Spo142400.67Barchart | Table
Spo152220.67Barchart | Table
Spo161860.67Barchart | Table
Spo191230.67Barchart | Table
Spo177260.66Barchart | Table
Spo182230.66Barchart | Table
Spo259870.66Barchart | Table
Spo169960.66Barchart | Table
Spo237450.66Barchart | Table
Spo238530.66Barchart | Table
Spo108640.66Barchart | Table
Spo090080.66Barchart | Table
Spo021060.66Barchart | Table
Spo146670.66Barchart | Table
Spo146300.66Barchart | Table
Spo209300.66Barchart | Table
Spo143500.66Barchart | Table
Spo216360.66Barchart | Table
Spo218330.66Barchart | Table
Spo222550.66Barchart | Table
Spo224360.66Barchart | Table
Spo134990.66Barchart | Table
Spo199380.65Barchart | Table
Spo228110.65Barchart | Table
Spo137830.65Barchart | Table
Spo173370.65Barchart | Table
Spo039010.65Barchart | Table