Spo25054 (gene) | SpinachBase

Overview


Name	Spo25054
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	(Germin-like protein) (Precursor)
Location	chr3 : 14251576 .. 14252202 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATAACATTGTAGCTTTCTTCGCCTTTACTCTTTTCGTTTCTCTTTGTCAAGCTATTGAGCTCGACTTTTGTGTAGGAGATACTACTCTTCCTAGGGGACCTGAAGGATTCGCTTGCAAAGATCCTGCTAACGTCACCACAGATGATTTTGTTTTCACTGGTTTCCGTCATGAAAGTTTCACCGCAAATCTATTTAGAAGTAATGTCACTTTAGGATTCGTAGATAATTTCCCAGCTTTGAATGGTCTAGGTATTTCCATGGCAAGGTTAGACTTTGCAGTAGGTGGAGTTATACCAGTACACTCCCACCGAACATCTGAAGTAATAATCGTGACAAGAGGATCCATAATTGCAGGATTCATTGACGCAAGCAATAATGCATTCTACAGAAGACTCGAGGTTGGAGACGTTATGATCTTCCCACAGGCCATGCTTCATTTTCAAATCAACGTTGGCAGAACTCCAGCTACTGCAATTGTTAGCTTAAACGGTGCGAATCCGGCTGTCCAATTCACTACCACCTCCTTATTCGCCGGAAATTTACCTGCCGATATTGCTCAACAAATCACTCTTCTAAGTCAAGGCGAGGTGATGAGGATGAAAAGGTTATTTAGCACTGCTTAA

mRNA sequence

ATGAATAACATTGTAGCTTTCTTCGCCTTTACTCTTTTCGTTTCTCTTTGTCAAGCTATTGAGCTCGACTTTTGTGTAGGAGATACTACTCTTCCTAGGGGACCTGAAGGATTCGCTTGCAAAGATCCTGCTAACGTCACCACAGATGATTTTGTTTTCACTGGTTTCCGTCATGAAAGTTTCACCGCAAATCTATTTAGAAGTAATGTCACTTTAGGATTCGTAGATAATTTCCCAGCTTTGAATGGTCTAGGTATTTCCATGGCAAGGTTAGACTTTGCAGTAGGTGGAGTTATACCAGTACACTCCCACCGAACATCTGAAGTAATAATCGTGACAAGAGGATCCATAATTGCAGGATTCATTGACGCAAGCAATAATGCATTCTACAGAAGACTCGAGGTTGGAGACGTTATGATCTTCCCACAGGCCATGCTTCATTTTCAAATCAACGTTGGCAGAACTCCAGCTACTGCAATTGTTAGCTTAAACGGTGCGAATCCGGCTGTCCAATTCACTACCACCTCCTTATTCGCCGGAAATTTACCTGCCGATATTGCTCAACAAATCACTCTTCTAAGTCAAGGCGAGGTGATGAGGATGAAAAGGTTATTTAGCACTGCTTAA

Coding sequence (CDS)

ATGAATAACATTGTAGCTTTCTTCGCCTTTACTCTTTTCGTTTCTCTTTGTCAAGCTATTGAGCTCGACTTTTGTGTAGGAGATACTACTCTTCCTAGGGGACCTGAAGGATTCGCTTGCAAAGATCCTGCTAACGTCACCACAGATGATTTTGTTTTCACTGGTTTCCGTCATGAAAGTTTCACCGCAAATCTATTTAGAAGTAATGTCACTTTAGGATTCGTAGATAATTTCCCAGCTTTGAATGGTCTAGGTATTTCCATGGCAAGGTTAGACTTTGCAGTAGGTGGAGTTATACCAGTACACTCCCACCGAACATCTGAAGTAATAATCGTGACAAGAGGATCCATAATTGCAGGATTCATTGACGCAAGCAATAATGCATTCTACAGAAGACTCGAGGTTGGAGACGTTATGATCTTCCCACAGGCCATGCTTCATTTTCAAATCAACGTTGGCAGAACTCCAGCTACTGCAATTGTTAGCTTAAACGGTGCGAATCCGGCTGTCCAATTCACTACCACCTCCTTATTCGCCGGAAATTTACCTGCCGATATTGCTCAACAAATCACTCTTCTAAGTCAAGGCGAGGTGATGAGGATGAAAAGGTTATTTAGCACTGCTTAA

Protein sequence

MNNIVAFFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAGFIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPADIAQQITLLSQGEVMRMKRLFSTA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo25054.1	Spo25054.1	mRNA

Homology

[Close]

BLAST of Spo25054.1 vs. NCBI nr
Match: gi|902210708|gb|KNA16511.1| (hypothetical protein SOVF_088480 [Spinacia oleracea])

HSP 1 Score: 401.0 bits (1029), Expect = 1.300e-108
Identity = 202/208 (97.12%), Postives = 203/208 (97.60%), Query Frame = 1


		  
Query: 1   MNNIVAFFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           M N+VAFFAFTL VSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES
Sbjct: 1   MKNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLSQGEVMRMKRLFSTA 209
           NLPADIAQQITLLS  EVMRMKRLF TA
Sbjct: 181 NLPADIAQQITLLSHDEVMRMKRLFGTA 208

[Close]

BLAST of Spo25054.1 vs. NCBI nr
Match: gi|594553152|gb|AHM10392.1| (GLP [Spinacia oleracea])

HSP 1 Score: 401.0 bits (1029), Expect = 1.300e-108
Identity = 202/208 (97.12%), Postives = 204/208 (98.08%), Query Frame = 1


		  
Query: 1   MNNIVAFFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           M N+VAFFAFTL VSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES
Sbjct: 1   MKNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVD+FPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDSFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLSQGEVMRMKRLFSTA 209
           NLPADIAQQITLLSQ EVMRMKRLF TA
Sbjct: 181 NLPADIAQQITLLSQDEVMRMKRLFGTA 208

[Close]

BLAST of Spo25054.1 vs. NCBI nr
Match: gi|902168695|gb|KNA07543.1| (hypothetical protein SOVF_170820 [Spinacia oleracea])

HSP 1 Score: 388.3 bits (996), Expect = 8.600e-105
Identity = 198/209 (94.74%), Postives = 201/209 (96.17%), Query Frame = 1


		  
Query: 1   MNNIVAFFAFTLFVSLC-QAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHE 60
           MNN+VAFF FTL VSL  QAIELDFCVGDTTLPRGP+GFACKDPANVTTDDFVFTGFRHE
Sbjct: 1   MNNLVAFFTFTLLVSLSDQAIELDFCVGDTTLPRGPKGFACKDPANVTTDDFVFTGFRHE 60

Query: 61  SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA 120
           SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA
Sbjct: 61  SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA 120

Query: 121 GFIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA 180
           GFIDA+NNAFYRRLEVGDVMIFPQ MLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA
Sbjct: 121 GFIDATNNAFYRRLEVGDVMIFPQTMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA 180

Query: 181 GNLPADIAQQITLLSQGEVMRMKRLFSTA 209
           GNLPA IAQQITLLSQ EVMRMKRLF TA
Sbjct: 181 GNLPAHIAQQITLLSQDEVMRMKRLFGTA 209

[Close]

BLAST of Spo25054.1 vs. NCBI nr
Match: gi|902168694|gb|KNA07542.1| (hypothetical protein SOVF_170810 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 380.9 bits (977), Expect = 1.400e-102
Identity = 191/197 (96.95%), Postives = 193/197 (97.97%), Query Frame = 1


		  
Query: 1   MNNIVAFFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           MNN+VAFF FTL VSLCQAIELDFCVGDTTLPRGPEGFACKD ANVTTDDFVFTGFRHES
Sbjct: 1   MNNLVAFFTFTLMVSLCQAIELDFCVGDTTLPRGPEGFACKDSANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQ+MLHFQINVGRT ATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQSMLHFQINVGRTSATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLSQGE 198
           NLPADIAQQITLLSQGE
Sbjct: 181 NLPADIAQQITLLSQGE 197

[Close]

BLAST of Spo25054.1 vs. NCBI nr
Match: gi|902176656|gb|KNA08808.1| (hypothetical protein SOVF_159240 [Spinacia oleracea])

HSP 1 Score: 337.4 bits (864), Expect = 1.700e-89
Identity = 169/208 (81.25%), Postives = 182/208 (87.50%), Query Frame = 1


		  
Query: 1   MNNIVAFFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           MNN+V FFA +L V +  AIELDFCVGDTTLPRGP+G+ACKDPANVTTDDFVFTGFR E 
Sbjct: 1   MNNLVVFFALSLLVYVSHAIELDFCVGDTTLPRGPQGYACKDPANVTTDDFVFTGFRGER 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
            T N+FR NVTL FV+ FPALNGLGISMARLDF VGGVIPVHSHRTSE+I V RGSIIAG
Sbjct: 61  TTTNMFRYNVTLAFVNQFPALNGLGISMARLDFGVGGVIPVHSHRTSEIITVIRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASN A+YRRLEVGDVMIFPQ+MLHFQINVG TPATAIVSLNGANPAVQFT  SLFAG
Sbjct: 121 FIDASNTAYYRRLEVGDVMIFPQSMLHFQINVGTTPATAIVSLNGANPAVQFTMDSLFAG 180

Query: 181 NLPADIAQQITLLSQGEVMRMKRLFSTA 209
           NLPA+IA+QITLLS  EV RM+R F  A
Sbjct: 181 NLPANIAEQITLLSNEEVTRMRRSFDNA 208

[Close]

BLAST of Spo25054.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RAI3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_088480 PE=3 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 9.000e-109
Identity = 202/208 (97.12%), Postives = 203/208 (97.60%), Query Frame = 1


		  
Query: 1   MNNIVAFFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           M N+VAFFAFTL VSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES
Sbjct: 1   MKNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLSQGEVMRMKRLFSTA 209
           NLPADIAQQITLLS  EVMRMKRLF TA
Sbjct: 181 NLPADIAQQITLLSHDEVMRMKRLFGTA 208

[Close]

BLAST of Spo25054.1 vs. UniProtKB/TrEMBL
Match: W8S9T6_SPIOL (GLP OS=Spinacia oleracea PE=2 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 9.000e-109
Identity = 202/208 (97.12%), Postives = 204/208 (98.08%), Query Frame = 1


		  
Query: 1   MNNIVAFFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           M N+VAFFAFTL VSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES
Sbjct: 1   MKNLVAFFAFTLLVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVD+FPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDSFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLSQGEVMRMKRLFSTA 209
           NLPADIAQQITLLSQ EVMRMKRLF TA
Sbjct: 181 NLPADIAQQITLLSQDEVMRMKRLFGTA 208

[Close]

BLAST of Spo25054.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLH3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_170820 PE=3 SV=1)

HSP 1 Score: 388.3 bits (996), Expect = 6.000e-105
Identity = 198/209 (94.74%), Postives = 201/209 (96.17%), Query Frame = 1


		  
Query: 1   MNNIVAFFAFTLFVSLC-QAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHE 60
           MNN+VAFF FTL VSL  QAIELDFCVGDTTLPRGP+GFACKDPANVTTDDFVFTGFRHE
Sbjct: 1   MNNLVAFFTFTLLVSLSDQAIELDFCVGDTTLPRGPKGFACKDPANVTTDDFVFTGFRHE 60

Query: 61  SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA 120
           SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA
Sbjct: 61  SFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIA 120

Query: 121 GFIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA 180
           GFIDA+NNAFYRRLEVGDVMIFPQ MLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA
Sbjct: 121 GFIDATNNAFYRRLEVGDVMIFPQTMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFA 180

Query: 181 GNLPADIAQQITLLSQGEVMRMKRLFSTA 209
           GNLPA IAQQITLLSQ EVMRMKRLF TA
Sbjct: 181 GNLPAHIAQQITLLSQDEVMRMKRLFGTA 209

[Close]

BLAST of Spo25054.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QJX0_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_170810 PE=3 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 9.600e-103
Identity = 191/197 (96.95%), Postives = 193/197 (97.97%), Query Frame = 1


		  
Query: 1   MNNIVAFFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           MNN+VAFF FTL VSLCQAIELDFCVGDTTLPRGPEGFACKD ANVTTDDFVFTGFRHES
Sbjct: 1   MNNLVAFFTFTLMVSLCQAIELDFCVGDTTLPRGPEGFACKDSANVTTDDFVFTGFRHES 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
           FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG
Sbjct: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASNNAFYRRLEVGDVMIFPQ+MLHFQINVGRT ATAIVSLNGANPAVQFTTTSLFAG
Sbjct: 121 FIDASNNAFYRRLEVGDVMIFPQSMLHFQINVGRTSATAIVSLNGANPAVQFTTTSLFAG 180

Query: 181 NLPADIAQQITLLSQGE 198
           NLPADIAQQITLLSQGE
Sbjct: 181 NLPADIAQQITLLSQGE 197

[Close]

BLAST of Spo25054.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QQ38_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_159240 PE=3 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.200e-89
Identity = 169/208 (81.25%), Postives = 182/208 (87.50%), Query Frame = 1


		  
Query: 1   MNNIVAFFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHES 60
           MNN+V FFA +L V +  AIELDFCVGDTTLPRGP+G+ACKDPANVTTDDFVFTGFR E 
Sbjct: 1   MNNLVVFFALSLLVYVSHAIELDFCVGDTTLPRGPQGYACKDPANVTTDDFVFTGFRGER 60

Query: 61  FTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHRTSEVIIVTRGSIIAG 120
            T N+FR NVTL FV+ FPALNGLGISMARLDF VGGVIPVHSHRTSE+I V RGSIIAG
Sbjct: 61  TTTNMFRYNVTLAFVNQFPALNGLGISMARLDFGVGGVIPVHSHRTSEIITVIRGSIIAG 120

Query: 121 FIDASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAG 180
           FIDASN A+YRRLEVGDVMIFPQ+MLHFQINVG TPATAIVSLNGANPAVQFT  SLFAG
Sbjct: 121 FIDASNTAYYRRLEVGDVMIFPQSMLHFQINVGTTPATAIVSLNGANPAVQFTMDSLFAG 180

Query: 181 NLPADIAQQITLLSQGEVMRMKRLFSTA 209
           NLPA+IA+QITLLS  EV RM+R F  A
Sbjct: 181 NLPANIAEQITLLSNEEVTRMRRSFDNA 208

[Close]

BLAST of Spo25054.1 vs. ExPASy Swiss-Prot
Match: ABP20_PRUPE (Auxin-binding protein ABP20 OS=Prunus persica GN=ABP20 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 6.300e-47
Identity = 91/196 (46.43%), Postives = 125/196 (63.78%), Query Frame = 1


		  
Query: 8   FAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANLFR 67
           F F L +S   A   DFCV D   P GP GF+CK PA+V  +DFVF+G      T+N+ +
Sbjct: 12  FTFFLLLSSSNAAVQDFCVADLAAPEGPAGFSCKKPASVKVNDFVFSGLGIAGNTSNIIK 71

Query: 68  SNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDASN 127
           + VT  FV  FP +NGLGIS+ARLD AVGGV+P H+H   SEV+IV +G+I AGF+ + N
Sbjct: 72  AAVTPAFVAQFPGVNGLGISIARLDLAVGGVVPFHTHPGASEVLIVAQGTICAGFVASDN 131

Query: 128 NAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPADI 187
             + + LE GD+M+FPQ +LHFQ+N G  PA A  S   A+P +Q    +LF  +LP ++
Sbjct: 132 TPYLQTLEKGDIMVFPQGLLHFQVNGGEAPALAFASFGSASPGLQILDFALFKNDLPTEV 191

Query: 188 AQQITLLSQGEVMRMK 203
             Q T L   ++ ++K
Sbjct: 192 IAQTTFLDAAQIKKLK 207

[Close]

BLAST of Spo25054.1 vs. ExPASy Swiss-Prot
Match: AB19A_PRUPE (Auxin-binding protein ABP19a OS=Prunus persica GN=ABP19A PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.000e-44
Identity = 88/197 (44.67%), Postives = 124/197 (62.94%), Query Frame = 1


		  
Query: 7   FFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANLF 66
           FF F L +S   A   DFCV D   P GP G++CK PA VT +DFV++G      T N+ 
Sbjct: 6   FFTFFLLLSSSHASVQDFCVADYKAPDGPAGYSCKKPAKVTINDFVYSGLGIAGNTTNII 65

Query: 67  RSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS 126
           ++ VT  F   FP +NGLGIS+ARLD   GGVIP H+H   SEV++V +G+IIAGF+ + 
Sbjct: 66  KAAVTPAFAAQFPGVNGLGISLARLDLGPGGVIPFHTHPGASEVLLVVQGTIIAGFVASD 125

Query: 127 NNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           N  + + L+ GD+M+FPQ +LHFQ+N G TPA A  S +  +P +Q    +LF  +LP +
Sbjct: 126 NTPYLKTLKKGDIMVFPQGLLHFQVNGGGTPALAFPSFSSPSPGLQILDFALFKNDLPTE 185

Query: 187 IAQQITLLSQGEVMRMK 203
           +  Q T L   ++ ++K
Sbjct: 186 LIAQTTFLDAAQIKKLK 202

[Close]

BLAST of Spo25054.1 vs. ExPASy Swiss-Prot
Match: AB19B_PRUPE (Auxin-binding protein ABP19b OS=Prunus persica GN=ABP19B PE=3 SV=1)

HSP 1 Score: 179.5 bits (454), Expect = 3.800e-44
Identity = 87/197 (44.16%), Postives = 125/197 (63.45%), Query Frame = 1


		  
Query: 7   FFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANLF 66
           FF F L +S   A   DFCV D   P GP G++CK PA VT +DFV++G      T N+F
Sbjct: 6   FFTFFLLLSTSHASVQDFCVADYKAPDGPAGYSCKKPAIVTVNDFVYSGLGIAGNTTNIF 65

Query: 67  RSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS 126
           ++ VT  F   FP +NGLGIS+ARLD   GGV+P H+H   SEV++V +G+IIAGF+ + 
Sbjct: 66  KAAVTPAFAAQFPGVNGLGISLARLDLGPGGVVPFHTHPGASEVLLVVQGTIIAGFVASD 125

Query: 127 NNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           N  + + L+ GD+++FPQ +LHFQ+N G TPA A  S +  +P +Q    +LF  +L  +
Sbjct: 126 NTPYLKTLKKGDIIVFPQGLLHFQVNGGDTPAIAFPSFSSPSPGLQIVDFALFKNDLATE 185

Query: 187 IAQQITLLSQGEVMRMK 203
           +  Q TLL   ++ ++K
Sbjct: 186 LIAQTTLLDAPQIKKLK 202

[Close]

BLAST of Spo25054.1 vs. ExPASy Swiss-Prot
Match: GLP1_SINAL (Germin-like protein 1 OS=Sinapis alba GN=GLP1 PE=2 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 1.900e-43
Identity = 88/200 (44.00%), Postives = 128/200 (64.00%), Query Frame = 1


		  
Query: 4   IVAFFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTA 63
           I  FF  +LF S+  A   DFCV D   P+ P G++CK+P  VT +DF F+G      T+
Sbjct: 5   IQIFFILSLFSSISFASVQDFCVADPKGPQNPSGYSCKNPDQVTENDFAFSGLGKAGNTS 64

Query: 64  NLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFI 123
           N+ ++ VT  F   F  LNGL +S+ARLD A GGVIP+H+H   SEV++V +G+I AGFI
Sbjct: 65  NVIKAAVTPAFAPAFAGLNGLDVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFI 124

Query: 124 DASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNL 183
            ++N  + + L  GD M+FPQ +LHFQ+N G+ PA A V+   ++P +Q    +LFA +L
Sbjct: 125 SSANKVYLKTLSRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDL 184

Query: 184 PADIAQQITLLSQGEVMRMK 203
           P+++ +  T LS  EV ++K
Sbjct: 185 PSELVEATTFLSDEEVKKLK 204

[Close]

BLAST of Spo25054.1 vs. ExPASy Swiss-Prot
Match: GL33_ARATH (Germin-like protein subfamily 3 member 3 OS=Arabidopsis thaliana GN=GER3 PE=1 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.500e-43
Identity = 86/200 (43.00%), Postives = 128/200 (64.00%), Query Frame = 1


		  
Query: 4   IVAFFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTA 63
           I  FF  +L  ++  A   DFCV D   P+ P G++CK+P  VT +DF FTG      T+
Sbjct: 5   IQIFFIISLISTISFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTS 64

Query: 64  NLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFI 123
           N+ ++ VT  F   +  +NGLG+S+ARLD A GGVIP+H+H   SEV++V +G+I AGFI
Sbjct: 65  NIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFI 124

Query: 124 DASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNL 183
            ++N  + + L  GD M+FPQ +LHFQ+N G+ PA A V+   ++P +Q    +LFA +L
Sbjct: 125 SSANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDL 184

Query: 184 PADIAQQITLLSQGEVMRMK 203
           P+++ +  T LS  EV ++K
Sbjct: 185 PSELVEATTFLSDAEVKKLK 204

[Close]

BLAST of Spo25054.1 vs. TAIR (Arabidopsis)
Match: AT5G20630.1 (germin 3)

HSP 1 Score: 176.8 bits (447), Expect = 1.400e-44
Identity = 86/200 (43.00%), Postives = 128/200 (64.00%), Query Frame = 1


		  
Query: 4   IVAFFAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTA 63
           I  FF  +L  ++  A   DFCV D   P+ P G++CK+P  VT +DF FTG      T+
Sbjct: 5   IQIFFIISLISTISFASVQDFCVADPKGPQSPSGYSCKNPDQVTENDFAFTGLGTAGNTS 64

Query: 64  NLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFI 123
           N+ ++ VT  F   +  +NGLG+S+ARLD A GGVIP+H+H   SEV++V +G+I AGFI
Sbjct: 65  NIIKAAVTPAFAPAYAGINGLGVSLARLDLAGGGVIPLHTHPGASEVLVVIQGTICAGFI 124

Query: 124 DASNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNL 183
            ++N  + + L  GD M+FPQ +LHFQ+N G+ PA A V+   ++P +Q    +LFA +L
Sbjct: 125 SSANKVYLKTLNRGDSMVFPQGLLHFQLNSGKGPALAFVAFGSSSPGLQILPFALFANDL 184

Query: 184 PADIAQQITLLSQGEVMRMK 203
           P+++ +  T LS  EV ++K
Sbjct: 185 PSELVEATTFLSDAEVKKLK 204

[Close]

BLAST of Spo25054.1 vs. TAIR (Arabidopsis)
Match: AT1G72610.1 (germin-like protein 1)

HSP 1 Score: 162.5 bits (410), Expect = 2.700e-40
Identity = 84/196 (42.86%), Postives = 116/196 (59.18%), Query Frame = 1


		  
Query: 8   FAFTLFVSLCQAIELDFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANLFR 67
           F  +L  +L  A   DFCV +      P G+ C  P +V   DFVF+G      T N+  
Sbjct: 6   FLLSLLFALSNASVQDFCVANLKRAETPAGYPCIRPIHVKATDFVFSGLGTPGNTTNIIN 65

Query: 68  SNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSHR-TSEVIIVTRGSIIAGFIDASN 127
           + VT  F   FP LNGLG+S ARLD A  GVIP+H+H   SEV+ V  GSI AGF+ ++N
Sbjct: 66  AAVTPAFAAQFPGLNGLGLSTARLDLAPKGVIPMHTHPGASEVLFVLTGSITAGFVSSAN 125

Query: 128 NAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPADI 187
             + + L+ G VM+FPQ +LHFQIN G++ A+A+V+ N ANP +Q    +LFA +LP ++
Sbjct: 126 AVYVQTLKPGQVMVFPQGLLHFQINAGKSSASAVVTFNSANPGLQILDFALFANSLPTEL 185

Query: 188 AQQITLLSQGEVMRMK 203
               T L    V ++K
Sbjct: 186 VVGTTFLDATTVKKLK 201

[Close]

BLAST of Spo25054.1 vs. TAIR (Arabidopsis)
Match: AT3G05930.1 (germin-like protein 8)

HSP 1 Score: 126.7 bits (317), Expect = 1.700e-29
Identity = 70/187 (37.43%), Postives = 101/187 (54.01%), Query Frame = 1


		  
Query: 23  DFCVGDTTLPRGPEGFACKDPANVTTDDFVFTGFRHESFTANL-FRSNVTLGFVDNFPAL 82
           DFCV D +      G+ CKDPA VT +DF F G    + TAN    S VT   V+  P L
Sbjct: 29  DFCVADLSNGLKVNGYPCKDPAKVTPEDFYFIGLATAAATANSSMGSAVTGANVEKVPGL 88

Query: 83  NGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDASNNAFYRRLEVGDVMI 142
           N LG+S++R+D+A GG+ P H H R SE I V  G +  GF+  +     + +  GDV +
Sbjct: 89  NTLGVSISRIDYAPGGLNPPHLHPRASEAIFVLEGRLFVGFLTTTGKLISKHVNKGDVFV 148

Query: 143 FPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGN--LPADIAQQITLLSQGEV 202
           FP+A+LHFQ N  + PA+ + + +   P  Q    SLF  N  +P D+  +    +  E+
Sbjct: 149 FPKALLHFQQNPNKAPASVLAAFDSQLPGTQVVGPSLFGSNPPIPDDLLAKAFGAAAPEI 208

Query: 203 MRMKRLF 206
            ++K  F
Sbjct: 209 QKIKGKF 215

[Close]

BLAST of Spo25054.1 vs. TAIR (Arabidopsis)
Match: AT5G38910.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 126.7 bits (317), Expect = 1.700e-29
Identity = 75/169 (44.38%), Postives = 97/169 (57.40%), Query Frame = 1


		  
Query: 23  DFCVGDTTLPRGP--EGFACKDPANVTTDDFVFTGFRHESFTAN-LFRSNVTLGFVDNFP 82
           DFCVG  T   G    G  CKDP  VT +DF FTG  HE+   N    SNVT   V+N P
Sbjct: 30  DFCVGVNTPADGVFVNGKFCKDPKLVTVEDFFFTGL-HEARPPNPKTGSNVTAVNVNNLP 89

Query: 83  ALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSIIAGFIDAS--NNAFYRRLEVG 142
            LN LGIS+ R+D+ V G  P H+H R SEV+ V  G++  GF+ ++  N  F + L  G
Sbjct: 90  GLNTLGISLVRIDYGVYGQNPPHTHPRASEVLYVAVGTLFVGFVTSNPENRLFSKTLYEG 149

Query: 143 DVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTTTSLFAGNLPAD 186
           DV +FPQ ++HFQ+NVG+ PA A   L+  NP V     ++F  N   D
Sbjct: 150 DVFVFPQGLIHFQVNVGKYPAVAFAGLSSQNPGVITIADTVFGSNPQID 197

[Close]

BLAST of Spo25054.1 vs. TAIR (Arabidopsis)
Match: AT3G04200.1 (RmlC-like cupins superfamily protein)

HSP 1 Score: 126.3 bits (316), Expect = 2.200e-29
Identity = 73/187 (39.04%), Postives = 102/187 (54.55%), Query Frame = 1


		  
Query: 1   MNNIVAFFAFTLFVSLCQAIEL-DFCVGDTTLPRG-PEGFACKDPANVTTDDFVFTGFRH 60
           +  ++     T FVS      L DFCV  +   R    G  CKDP +VT +DF ++G   
Sbjct: 10  VTQVILLALATSFVSCYDPNPLQDFCVAASETNRVFVNGKFCKDPKSVTANDFSYSGLNI 69

Query: 61  ESFTANLFRSNVTLGFVDNFPALNGLGISMARLDFAVGGVIPVHSH-RTSEVIIVTRGSI 120
              T N   SNVT   V+  P LN LG+S+ARLDFA GG  P H H R +E+++VT+G +
Sbjct: 70  ARNTTNFLGSNVTTVDVNKIPGLNTLGVSLARLDFAQGGQNPPHIHPRATEILVVTKGKL 129

Query: 121 IAGFIDA---SNNAFYRRLEVGDVMIFPQAMLHFQINVGRTPATAIVSLNGANPAVQFTT 180
           + GF+ +   +N  FY+ L+ GDV +FP  ++HFQ+NV RT A A       NP      
Sbjct: 130 LVGFVSSNQDNNRLFYKVLKRGDVFVFPIGLIHFQMNVRRTRAVAFAGFGSQNPGTIRIA 189

Query: 181 TSLFAGN 182
            ++F  N
Sbjct: 190 DAVFGSN 196

The following BLAST results are available for this feature:

BLAST of Spo25054.1 vs. NCBI nr
BLAST of Spo25054.1 vs. UniProtKB/TrEMBL
BLAST of Spo25054.1 vs. ExPASy Swiss-Prot
BLAST of Spo25054.1 vs. TAIR (Arabidopsis)

BLAST of Spo25054.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902210708\|gb\|KNA16511.1\|	1.3e-108	97.1	hypothetical protein SOVF_0884...	[more]
gi\|594553152\|gb\|AHM10392.1\|	1.3e-108	97.1	GLP [Spinacia oleracea]	[more]
gi\|902168695\|gb\|KNA07543.1\|	8.6e-105	94.7	hypothetical protein SOVF_1708...	[more]
gi\|902168694\|gb\|KNA07542.1\|	1.4e-102	96.9	hypothetical protein SOVF_1708...	[more]
gi\|902176656\|gb\|KNA08808.1\|	1.7e-89	81.2	hypothetical protein SOVF_1592...	[more]

BLAST of Spo25054.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9RAI3_SPIOL	9.0e-109	97.1	Uncharacterized protein OS=Spi...	[more]
W8S9T6_SPIOL	9.0e-109	97.1	GLP OS=Spinacia oleracea PE=2 ...	[more]
A0A0K9QLH3_SPIOL	6.0e-105	94.7	Uncharacterized protein OS=Spi...	[more]
A0A0K9QJX0_SPIOL	9.6e-103	96.9	Uncharacterized protein (Fragm...	[more]
A0A0K9QQ38_SPIOL	1.2e-89	81.2	Uncharacterized protein OS=Spi...	[more]

BLAST of Spo25054.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5


Match Name	E-value	Identity	Description
ABP20_PRUPE	6.3e-47	46.4	Auxin-binding protein ABP20 OS...	[more]
AB19A_PRUPE	1.0e-44	44.6	Auxin-binding protein ABP19a O...	[more]
AB19B_PRUPE	3.8e-44	44.1	Auxin-binding protein ABP19b O...	[more]
GLP1_SINAL	1.9e-43	44.0	Germin-like protein 1 OS=Sinap...	[more]
GL33_ARATH	2.5e-43	43.0	Germin-like protein subfamily ...	[more]

BLAST of Spo25054.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5


Match Name	E-value	Identity	Description
AT5G20630.1	1.4e-44	43.0	germin 3	[more]
AT1G72610.1	2.7e-40	42.8	germin-like protein 1	[more]
AT3G05930.1	1.7e-29	37.4	germin-like protein 8	[more]
AT5G38910.1	1.7e-29	44.3	RmlC-like cupins superfamily p...	[more]
AT3G04200.1	2.2e-29	39.0	RmlC-like cupins superfamily p...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001929	Germin	PRINTS	PR00325	GERMIN	coord: 131..151 score: 2.3E-13coord: 164..179 score: 2.3E-13coord: 101..121 score: 2.3
IPR006045	Cupin 1	PFAM	PF00190	Cupin_1	coord: 68..194 score: 7.4
IPR006045	Cupin 1	SMART	SM00835	Cupin_1_3	coord: 63..199 score: 1.6
IPR011051	RmlC-like cupin domain	unknown	SSF51182	RmlC-like cupins	coord: 21..202 score: 1.34
IPR014710	RmlC-like jelly roll fold	GENE3D	2.60.120.10		coord: 22..203 score: 1.1
None	No IPR available	PANTHER	PTHR31238	FAMILY NOT NAMED	coord: 3..205 score: 5.5
None	No IPR available	PANTHER	PTHR31238:SF21	GERMIN-LIKE PROTEIN SUBFAMILY 3 MEMBER 3	coord: 3..205 score: 5.5

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005576	extracellular region
molecular_function	GO:0030145	manganese ion binding
molecular_function	GO:0045735	nutrient reservoir activity
molecular_function	GO:0016491	oxidoreductase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo25057	1.00	Barchart \| Table
Spo25055	0.81	Barchart \| Table
Spo27024	0.79	Barchart \| Table
Spo25897	0.72	Barchart \| Table
Spo26380	0.72	Barchart \| Table
Spo03777	0.71	Barchart \| Table
Spo20067	0.69	Barchart \| Table
Spo25740	0.69	Barchart \| Table
Spo20080	0.68	Barchart \| Table