Spo09191 (gene) | SpinachBase

Overview


Name	Spo09191
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Unknown protein
Location	chr3 : 28844626 .. 28848623 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTTTCGTTTTCTGACTTAATATGGCGCCCCAATTTCGTGGGTTTCGGTTTGCTCTTGAATTTTCTACTTGAATAAATCAGAATTAATCCGAATTTCGAGCTCCAATGTGATTTTTGATTATCGGAACTTAGGGTTTATCTAATTCGGGGCCTTTTCCGATTTGAGTAATTTGAAGAAAGGGGAGGTGTATTGTACAATTAGAAGTGGTCTCAACAGATTCAAGGTAAGTAATTATATTCCTTGCTTTTTAAGTTGATTGAATTAATCATTTGCTTCAAGCTGAATGTTAATGACATTTTGGATTTTGCATTGAGTTTCGAAATTGAACCTGTTTTAGTAATTTGTACGTGCAATTTATGAACACCCTAACTGTGACCCTTTAGCTGCTTATATTTTGTGAAATTTCGGTATTTGATTGTATTTTTTTTAACGCGGTATTTGATTGTTACAGGACCTAATTTACATTGTTCTATGGGAATTGAATTTGGGAATTAATTAATTAATTAATATTGTGTTCAGTAAAATAAAGTGGGAAAACGATTTTATTTTAATTCGTAATCACCAATTATCAGTCCACCATTACGGAACCTAATTTGTGCGTGTAAGGACTCACACTTGAGGGGAATATTGTTAAGCGCAAGTGTGATTATTGTGTGTCTTGATAAATTAATAAAGACTATTTGAGAAGTGGTAGTCTTTTGTATTTCATTGGTTTCTCAACAATCACAATAAGATATTTAAACAATCTATTAGGAGATTAGTAACCTATGGCAATTAATGACAATAATACTAGTAACATAAAATTAAATGGCAATAGTACTAGCTAGTAACATAAGGAACTAAATGGCACTAATAACAATGCTAATACAATAGTTAATAATAGTAACCTCCTTCTAATATGTCTCGTGTTATGTCTCGTGTTGAAAGATAAAACAAAGAGTTTTTGGCTTATATCCAAGTGGAATACTCTTTCTATTACCAATTTTTTTAGAATGAACCTCACTTTGGGATCTTGTTTCTTCTCTATCCTTTATAACAAATTGGTCTACGAGTCTGTCAACTAGGGGTTTTGCAGTCTTTGCACCATCTAATTGACATCATCTGGTTGTGTGTCCTTAGAGCAAAGCTCTATTGGGTCTGTATGTGTTTCAGTTGAAGGAAGAGTGTATTGACTAGCACTTGATGAGGAGATTACCAAGTGGGCAAGTGCAAGTGTGAGTATTGTGTGTAGCACATTGAAAGATAAAACAAAATTTGGCTACTTGTTCTATTTAACAATTAGCTTTAGAAGGACCCTCACTTTGGGGTTTATTAGTGGGCTTCTCTCTGTGTTTCTCTTGCACCTGTTACAACAGTGAAAATAAATGCAATCATGCTAAGTATAAAGTGGACTCCAAGCACAAGAAACATGGGCCTCATAGTTGAAAACTGGAAGAAGCTCAATATGAAACTCAAAAAATTATTCAGAAACAGGGGGCGGGACGACTAATTCATTGTTTAGATAGTACAACATCCATTATGCCTATACATTGAATTCTGTAGCAAGTAAGGTTGCCATGCAAGGACGAACTTTGCACATGGCTTCCAATGGCTTAGCTTTAGGCATAGTAAGTCCAGTGGATTGTGACATATCGACCATTTCTTTACTAGCTCGCTCCATGTTGAAGCACTGAATCACTGTCCCTAACACTAAACATACTGATCTTTTACCCATAGCATAGCCAGGACAAGCTCTCCTTCCAAGCCCAAATGGCAAAAGCTTGTATAGAGATTCCCCTTCCTTCCCCTCGAATCTCTCTGGATTAAAATTTTCAGGCTCCATCCATATCTTTGGGTCTCTATGTATAGTCCATAGACTAACCATTAACATGGTTCCTCGGGGGACATCGTAACCACAAATAGTAGAGTCCTCTGATGACTCATGTGGGAGAAGAAGCGGAGTTGGTGGGTACAAGCGGAGGGTCTCGTTTATGACATTTTGGAGGTATGGTAGTTTTGATATATCCTCTTCGTTCAATAGGCGATCATGTCCTATTACATCATCTATTTCTTCTTGTGCTTTCTTCATAGCCTCTGGGTGGTTTAGGAGAAGTGACATTGCCCATTCTATAGTAGCTGCTGTGGTGTCTGCTCCAGCAAGTACTAGTACCTACACTCGTAAAACACATGTCTACTAATCAGAATTTCAGAAATAGTCAAAATTCAAAACATTATTTTTTTCCCCTCATTTGGTCTATGTCAAAATTCTAGTATAAAATATAAAAAGTATATCGTTTTGGCTAATTTGAGTTCTGTCCAAATCGAAAAAAATGATCAAATAATCAAATTGTAATATTGTTTGAATGGCTGCTGAATTGCTGATCAGTAGTAATCATTGGTTTGTTATGTTGCAGTGCCCAAAATAGATATTACTCCATACTAAAATAAGTTCCACATGCTAATTGATGGTCAAATTTTACAAAAGTTGACTCTAAAGTTTTATGAACAGCTGAGGATAAATATAGTCTTGTGAATTTTGTTGTATTAATCTCAATGTATGAATTTATAAAAACCAATATTAGATTTGAAGTAATATTTTTTCAATACTCAATTTAATATATTTATGTTGAAGTCGTGTCTTAAAATGATCGTACTTACCATAATCATACCCTTGATGACTTCGTTGGTAAAGAAGACTGGATCCTGTTTTTGTGCTGAAATAAGAACATCAATAATAGCCTTGGTACCATCCGTATTGACTTTGCTCTTTCGTTCGTCTAGGAGCTGTTGGTAGAAACTGTCCGTTTTGTCCATCCATGCCACCATTTGTCTCTCCAAACCTCGAAACAGAAACTTTAGTATAGGTAGAAAATCTCCTGGATTATCAGCTGCACTCAACACTGATCCCTCCCTTAGTAATTCGCTGAACTGCTTTGCTTGAGTTGCATCCTCAATATCCTTTCCGTAGTACCTGAAACAGAACAACCATACCAACGGGGTCATTATACATGAAGAGTATAGTCAAGCTAGCCAGTTTACTAATTTTCCACAACAAATTATAGCATTCTCATTAAAATAATAGAAGACGTTGGAAATTATTTTTACGCTCACAAAATTAACATCCGGTCCCTGTTACACAGTTATATTTGATACAAACTTTTAGGAAAGACGGCCTGACGATTAGACCACTTTTATGCACCGGAACCAATTAGTTATGCACTTTAACTAATTAGTTAACCACTGAAACCAATTAGTTAAATCTGAAATTCAATTAGTTATTATCCCTTTTATTTTTGGTTATTATTATACTAATTACTAGTTCTAGGTTTGTAAATTAAAGCTAAATTTGAGAATGTTAAGTGTCTAGTTATTGGTAAACAGGATTTGCAGACAACAGATTCACAGTTTTCATCTTCCTTAACAAACCAATCGAAACTTACTAGAACTTATTTGCCTTAATTTGAACATATTTTTCTTAAACCTTACTCCGTAGTTTTCTAAGACAAAGGAAAAGCCTAAGTATTATCATAGTTAACACAATAATCAAGTAATCCAGTATGAAGGTGGTGGTAAAATATTTGGTACAAACTCTTAAAGGTTTAAACTTTAAAGCATGTTACCTCTTGCCAGCAGTCATCATTGTCATAATATTGAGCGCCAAGTGATTAAACCCTTGATTTAAATTGACTTTTACAGGCTCATCAGAAGCAGCTTCTTGGAACAAATTCCGAATTAGGAAGTTGCATTCATCTTGGCGAATCCCAGAAAAAAGGGGGATCTTTGTAGATGAAAACACTTCTTGGGTCATGAGCCTTTTGAGAGTCCGGAAATGATCATTGTAGGGTGAAAAGGCAATTGATGTGTTGTTGTAATGCAGGAGCCTCCCAACAAGGGTATCTGGTCGATCAGCAAAGATAGTGTCGTTTTTTACCAGACATTCTTCCACTGCTGAGGGGGAGGAGATAAGGAGGACTTTACGCACCCCAAGCTTGAGGAGTAAGATTTCTCCGTAA

mRNA sequence

ATGGCACTTTCGTTTTCTGACTTAATATGGCGCCCCAATTTCGTGGGTTTCGCAAGTAAGGTTGCCATGCAAGGACGAACTTTGCACATGGCTTCCAATGGCTTAGCTTTAGGCATAGCTCATCAGAAGCAGCTTCTTGGAACAAATTCCGAATTAGGAAGTTGCATTCATCTTGGCGAATCCCAGAAAAAAGGGGGATCTTTGAGCCTCCCAACAAGGGTATCTGGTCGATCAGCAAAGATAGTGTCGTTTTTTACCAGACATTCTTCCACTGCTGAGGGGGAGGAGATAAGGAGGACTTTACGCACCCCAAGCTTGAGGAGTAAGATTTCTCCGTAA

Coding sequence (CDS)

ATGGCACTTTCGTTTTCTGACTTAATATGGCGCCCCAATTTCGTGGGTTTCGCAAGTAAGGTTGCCATGCAAGGACGAACTTTGCACATGGCTTCCAATGGCTTAGCTTTAGGCATAGCTCATCAGAAGCAGCTTCTTGGAACAAATTCCGAATTAGGAAGTTGCATTCATCTTGGCGAATCCCAGAAAAAAGGGGGATCTTTGAGCCTCCCAACAAGGGTATCTGGTCGATCAGCAAAGATAGTGTCGTTTTTTACCAGACATTCTTCCACTGCTGAGGGGGAGGAGATAAGGAGGACTTTACGCACCCCAAGCTTGAGGAGTAAGATTTCTCCGTAA

Protein sequence

MALSFSDLIWRPNFVGFASKVAMQGRTLHMASNGLALGIAHQKQLLGTNSELGSCIHLGESQKKGGSLSLPTRVSGRSAKIVSFFTRHSSTAEGEEIRRTLRTPSLRSKISP

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo09191.1	Spo09191.1	mRNA

Homology

The following BLAST results are available for this feature:

BLAST of Spo09191.1 vs. NCBI nr
BLAST of Spo09191.1 vs. UniProtKB/TrEMBL
BLAST of Spo09191.1 vs. ExPASy Swiss-Prot
BLAST of Spo09191.1 vs. TAIR (Arabidopsis)

BLAST of Spo09191.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo09191.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo09191.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

BLAST of Spo09191.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0020037	heme binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0004497	monooxygenase activity
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0016491	oxidoreductase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo09185	0.78	Barchart \| Table
Spo03777	0.76	Barchart \| Table
Spo25740	0.71	Barchart \| Table
Spo27151	0.71	Barchart \| Table
Spo16342	0.70	Barchart \| Table
Spo26380	0.67	Barchart \| Table