Spo21827 (gene) | SpinachBase

Overview


Name	Spo21827
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	30S ribosomal protein S9, chloroplastic
Location	chr3 : 38164820 .. 38171823 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TATCCATACGACAGCCAAATCCTTGAAATTGCTACAAACATTATCCGCTCTCGGAAACAGAGGATTTCCTCTCCTCCATTGTTGAAAACCTCCAACTTTCCCCACTGTAAAACACACTAAAAAATGGCGGTCTCAATTTCGTCACTCACATCATCCTTCGCTTCACTGTCATTCACCTCCAACCTCACTCCCAAACCCCAAACCTTACCCATGGCGCGCACCAAACCCTTCTCATTATCCAACCCAGCGGTCGTCAAACCACTTGTCATCACCGCAACATCCGCCACCGCACCGGTGGAAGTAGCTGAGACTGCCGACCTTGAGAAGTTTGTCAAGTCGCGTCTTCCGGGCGGGTTCGCAGCACAGACAGTAATTGGCACCGGAAGGCGAAAATGCGCCATTGCTAGGGTTGTTCTTCAAGAAGGAACTGGAAAATTTATTATTAATTACCGTGATGCTAAGGTTTCTCTCTCCTCTTTCGAAATTTTTACTTGAATTTTATGTTAAGCTGCATTTTGATGTTTTATTTGTGCTTCTAATTTCTATCTTCTTCGAGTTTTTTTGGTAGGTCTGAATTTGAATTGCTATTATAATTCACCAAGTGCTTACACTTAACATAAGTCGTATCGAATTTGAAAGTCCGGTTATAGACTTATAGTAGAGAGTAGAGACTTTGTTCTTGTTGGTTCACATAAAACCGCAATTTAGAAGGTGGACCATGGTGCACATAGAGCATGGTGCACCTTAAGAACATTAGTATATAATTAAAAGAACATCTGGTTACGTAAAAAGAACATGGACATATATTTTTTTATATTTTTAATAAATTGTGATTTTTTATAACAAAAAAGTAAAATATTATATTGCATGTTCTTTTGTCGTAGTGTCATGTTCTTTTGTTTATGCACATGTGTTCTTTTGGTGCACATGGTGCACCATGCTCTATGTGCACCATGGTCCATAGTCCATGGATTGACATAAAACTGCATAGAATGTATTGAGTAGGATTCCTTAGGAAGTGGAATCTAGGAGTTATTTGGTTGACAAAATCAGTTTATCAAATGTTCGACTTCCCATAAAATGGGGTAAGTGGTTATCATATGTGACCCGGGTGCACAATGCTCTGTGCAAATACAAAGAACATATTGTTTAGAGCCAAAGAAGTGAAAAAGAACATATAGTAAATGAACATATATTAAAATATTTCACTTCTACGCGTGCGTTGAAATCATTTTCCATGTTTATTAGGTGCTCAGTGAGTGTTCATCACTGTGCACTCGTGTTTATAATCCAAATTGTGGTTCTCCTCGTAAGTGGAATTTCTTGTGGCCAAATAGTTTTGTTCACTTCCGATGTTAGAAAAAGTTGCGACGTTGTAAGGTTATTCAACCAATGACCACATAGAATAGGCCAAATATCCCTTGTTGGTATCATACTGAGCATGGGGCGTCCGGGGATGCCATGGAGTGCTTTGATTAGAAGAAAGCTCAAAAGGTGTTGGTAGATGTTGGGAAATCTTGTCGAGTGGCATTGGAATTTTAAAAGATAATTTGTTGGATCAGAATCTAACAGATAAGTCTGACAAAATGATAAAGAGAACTTTCGATGATAGAATGGATCACTGTTAATGGCGATCATGATAATTTTAAATTTCTTGGCAGAAATGAAGGCTTCTTTGAAGAGCCTACACAACCAAGTGACCATATAGTTTCAGCACTAGTTAAGATCCCAAATAAGTTGGTAAGAAGTGTCTGCTGGAAATGAAAAGTTGTATTTACAGAGTAATTTGGATTGTTTAAAATATGATGAATATGAAATGATATTATTTTAGTTAGAAAAACCCTCATCGGATTTAGGAGTAATGAATGTTTAGAACTATAAAGTTTTATATCTAAGTTCCACAAAAAAAATCTTACAAATTAAGTTCTTATATAAGTTTGACAATCACCAAAGAAGCGGAACATTGAGAAGAGACGAAAGAAGGCATTTGAAGACATACAATACGAGGGTAACAACTCTGATAAATACAGAGAGAAAGTTTGAGAATGCATAGCTACTCATCATATTGTAGCCCTTTTAGCAATCATCTTTTGGGCGATGTTAGCAAAATAGGTTGAAGAACATTGCATGGGGTTATAAGTCTGAAGTTCAAAGATCAAAATTCAATAATGACTTTTGAGAAAAGGAAACGACTCAAGGAATTGTAGTTTATCTTGTATGTAAAGTAAACCAAAAAAGAACAGAATTATGCAAGATAGAAGCCAAGTAGCCAACCCATTTTCTGATATATTATTGGGTTGTGATTCATAAAACGTTACTCCGTACTATCATAATTTCCTAAATACTTTTGAGGATTGGTTCCTTTTCCTTCTTACGAACAAAATCTGAATTTGTTATTTACATGGAAATGGGTTAGGTTTGCTTATCACTATTGGAAAAGAAAAATATGAACTGTTGGGAGTTGGTAATAGTTGTTAGGGTATTTCAATTACAAGCACAACAAGCAAGGGACGGTTAATGGAAATCTATGAAGTATTTTGAGGCGTTATTATTTATATCAGGCATAAAAGAAAATGTACTTTGAGTTGAAAGCAATGCAAAAGGGAACCACAAATTACAGAACTTTTCAGTTTGAACTGAAGAATTAAGCACTGTAAGTAACAGATCTTTACATCAATTAACACCTGATTTATTGTGATAAGTCGTGGTTATGTTCAACTAACCTGATTTATTGTGATAAGTCGTGGTTATGTTCAACTAACAAGTCCGAAGTGTGTTAGTGCTTATGATTTTGTGAAACTCACTATCTTTATGTACTCTCCCTAAGCTAAATCGAAGTTTATTCTCACCAGAGTTCCACTGCCCAAAGTCGTGACTCTTATGTGGCTGTTGTTCACTTGTCCCTGCTGCTGCAATGTTTGAGTTCCCCCATAATTGGTTCAAAGGTTCCTGCATATCCATTTATAACCCTCGCCGATGGCATACCACTATGCTTTGTAGATTTGGTTCAAAATATCACTGAACAGCAAGCTAATGGTGTTGTTCTGCCATCATAGCTGCTGCTGTCGCTTTTGTTTTATAAACTGAATTGATGTGGTCATAAGCTTTGTAAACGAGGCCATGTGATCATTAATTGACGCTACCGCTCAATTGACGCTAAAGTTGTCGGAGCTGGATATTTCAGAAGAGCATCCTTGAATGTTCTGTGGGCAGATCAGATTAGTTGCTTCAAGCTCTTCTACTCAATCCTCAGTATCTTTGAATTGAAGTTTTCTCTCTAATTATGGTGGTGTTGCCTGATCCTTTTTTCTACGAACCAAAATTTTCCGATAGAAAACCAACAGGGAACATGAAGATTGTGAATGATAAGCTTTGGAATTGCAGAAATTAAGATAGATTATCAAGCTTTCCAGATGCTTGGTTCTCTCTCGTAACTAAAAGTAACTAACATTTGCTCTCAATAATATTCTTATAATTTCTCTTTCTCTAATATCCTCCACTTTTAGACAATCTGATTCCCTTTTCCTTCTTTCTCCTCAAACTTTCTTGCCTTACTACTCAAGCTACTACTACCTGAATAAAAATACCAATACCTATAGTGCCCCTCACCTGTTGCCGGTTCATTGGACTTTCTTGATAATCCTTGTTTGGATACAGTGATGGACGAACAAGGGTGGTAATGATAATGGGTTCCGAGTCAATTGAACTGTTAAAAATTAGCTGAACTGCTAGACTCCCTTGATTCTTCTATCAGCTTTTCCTAGCTTGAGCTTGTGCCTAGATGTTACTCCCTCCGTCCCAAATTAAGTGCAATGTTTGACTTTGCGCGGTCTACAAGACACATATTTAACATAAATTTTATTTTTTTAACTATTAATACTGATTCTATAATTGTAAATTGTTGAATTGGGACGGAGGGAGTACTAGTTAATAGAACACTTTTGTGCCCAACTGTCCTTAGTTTTTTTCCCACTATTTTCTCCAATTTCTCCAAGCATACGCTTTACATTTCAAAAGTTATTTTGATGTCTTTTAGTGCATTAAAGATGTATAAGCAAGTCTACAACAAAGCTTAAATGAAAATATTTTCAAAATCACCTTAAATGTACTGCTGAGGGATGAACCTAGAATAACTGAAAGAAAAGCCTTTCCTATGCAACCAGGGTTGACGTGTAAAGCACTAGAGGAAATCGCTTAATTAGGCCTGGCGAAACGTTTTGGAAGAAGCGCGCCGAAGCGAAGCGTGCTTTTTTGCGCTTCATTAAAATTCCTTTTTTTAAATTTTTTATTTTTTTTTTACGTTGGATGCTTCTTTTTTTATTTTACGTTAAAAGCTTCTTTTTTTATGTTGTTATTGTGTTTTGGACCACGCGCTATTAATCTTTAACAATAGAAAGTGTGCCAAGAGTCCAAAAGAAAAGAAGACAGCAAGCACAACAGTCGGCCCTAACTTCTTGATATATATTATGTTACATGCTTTATTTTTGTTAAAACAAAGAGTAGTATATTTTTGGAAGCAAATTTGATGTTTATATAGTGATTTTTTTAGTAAGGTATATATTCATAATAGTAAAGAAACTGTTAATTCTTAAATATTGCGCTTCACTTCGATGAAGAGCGCACCTTGCGCATAGGCTCTAGGACTCATATAGCTTTAGTGCGCTTTGCGCTTTTTTATACACTAAACCAGGGTAAGGTTATTTACTTTTTAATGAAGCATGCTTCAATGTTACATGATTCAAAACTTACAGAACACTAATACTTCCGCCGTTTCACTAAAATTGCAACATGTTTGAAAAGAAAATTCAACACTTCCCTTTTGGGTAACTTTTGCAACTTAAGTAATTTTATTGTATATTCACATGGTTACAGCCCACTTGCATTCTCTTTCCTCTTGCATAAAATATTTGCAAAATGCAAGGGTTGAAATTTTATTGAACGGATAAAGCAGTTGATATCTATTACCTTTGCAAACAGTTTGATAGAGAAGAAAATGGGTGGCGCCAGCACAATTTTGCCTCTTTTGCATGTACCTATCCTTGAAACCTTGTATCATGTGAAATATGATTTTTTTTTTTTGTTTTTTTTTTTTAATAAATAGTCTGGACCAGTGCAGAGGTAGAGAGAGTGAGATATGACTTAAATTGCATCTCTGTGCAGGAATATCTTCAAGGAAACCCACTGTGGCTGCAATATGTGAAAACCCCCTTGGCTACTTTGGGTTATGAAACGAACTATGACGTCTTTGTTAAAGCACATGGTGGTGGGCTTTCTGGTCAAGCACAAGCAATATCTCTTGGTGTTGCCAGGGCATTGTTGAAGGTCAGTGCAAGTCATAGAGCACCTCTCAAACAAGAGGGTCTTCTGACTAGAGATTCCAGGATAGTGGAGAGGAAGAAACCTGGTCTCAAGAAAGCTCGCAAAGCTCCTCAATTTTCAAAACGTTAAGGTAGAAATTGTTATTTTATCCACACTTTCCGCAATATAACCTTCTGAACTATTAAACTTTCACGGGGTCTTGTGCAGTTCCTATGTAATGGGTGGTAAAATTGTTGAATCTGTGCATTTAGACATTATCAGCAATCCAGTTGTGTTCAGACCAAGAATATCCAATTATCTTTGTGGAACCTTCTGCACAATTAAACTTTCTTAGTAGTCTTGTTTGATTATGATCTGTGAACCTTCACTTTATTGATAGACTTTGACACTCTTAGATTTTGAGTCCAACGTATACTGGCACTCTGGATTCTTCTCTTAATATTTCTACACTGTAGTATGCTTACATGGAAGAGTACAGATAATCAACTTGTTTTTTGCTATCTATATCAGTTGTTTCAGTGAGCCATTGAGGAACTGTGAGACTAATTTGTTGAGACCTTTAATGCTCATCTTATCAGTGCGTGGTATATCTGCTGAAGTTAATCAATCCTACTTTCAATTTCCGTTGTTGTCGATATTGATTATCATAACAAACCATGGAGAATATCGACACGTGTCTATGTCAAATTTTTAAACTCTGATGTAATCACAGGATATTTACTAGCAGAGCCAAGTCAACAGAAGAAAGTCCAGGGAAGGCAAGTGAAGCTATGCTCAAGTGGATTAAGTTTCCTAAAGCTAACTCTGATATATTCGGAAACATTTTTTTGGTACTTTCACATTCTGTTATATGTAACTGGCACTTCCCTTTTTTGCCTTTGATATCATGAGTGGGAATAGATGCTTACTGTATATGTTTATCGAAGGGTGTAATCTTATACGTACCATCGTATGGTGAGTGAAAAATGTCCTCCTAATGCTCAATTTCTTGTTGCAGTCTTTCCGTTTTCTTCAAGTGAATAGCTCGATCATCTCTGATAATGCCTTCCTTCAATCTGAGTGTTAATCAAATTGGTCAAATTGGTTAGCACTGAAAGAGTTCTATCAAAACAGTCATATTAGATCAAAATCCTTAAGCTCAGTGGTATATATCCCTAACCCTAAAAAGATAGGAAAATACCTCATTTTCCCTTATAGGTTGTTAAACAAGATTGAGCTACGCTAACCAAACTGCGCTAAACGTCGTTTTACCTCCACCTTAAAATTCAGTTACACTGCTTGACCTCTAAAACAAATTCGCGTCAAGGGGTGAGACTAATAATGCTCCGACACCGCATCCTAATTGTGGAGATGCTTTAAAAAGGGGTTTCGCACCATTGTCCTCCGACCTATTTAACTTTCGCATGCTACAACTGTCACTTCGAGGAGACAATGAATGGAATGAACCAGACAATTATCAGAGAAGCTAATCTTGCTTTCGACAACTCAAAGACAGAGGAAAGGGGATCAAATTGATTGTCACAAGTCAATGAAAAACACTGTTCATGTTGCTTTTGAATTTGATTTTGGTGTGACATGGGGGTCGAATCCTTTTGGCAGCAACATTGTATGTTTTCGCTTTCTTTACAATTTTAATTCTTCTCTTCTTTTAACTGTCTTTGTTGTTCCTTCTTTGTACCCTTCCT

mRNA sequence

TATCCATACGACAGCCAAATCCTTGAAATTGCTACAAACATTATCCGCTCTCGGAAACAGAGGATTTCCTCTCCTCCATTGTTGAAAACCTCCAACTTTCCCCACTGTAAAACACACTAAAAAATGGCGGTCTCAATTTCGTCACTCACATCATCCTTCGCTTCACTGTCATTCACCTCCAACCTCACTCCCAAACCCCAAACCTTACCCATGGCGCGCACCAAACCCTTCTCATTATCCAACCCAGCGGTCGTCAAACCACTTGTCATCACCGCAACATCCGCCACCGCACCGGTGGAAGTAGCTGAGACTGCCGACCTTGAGAAGTTTGTCAAGTCGCGTCTTCCGGGCGGGTTCGCAGCACAGACAGTAATTGGCACCGGAAGGCGAAAATGCGCCATTGCTAGGGTTGTTCTTCAAGAAGGAACTGGAAAATTTATTATTAATTACCGTGATGCTAAGGAATATCTTCAAGGAAACCCACTGTGGCTGCAATATGTGAAAACCCCCTTGGCTACTTTGGGTTATGAAACGAACTATGACGTCTTTGTTAAAGCACATGGTGGTGGGCTTTCTGGTCAAGCACAAGCAATATCTCTTGGTGTTGCCAGGGCATTGTTGAAGGTCAGTGCAAGTCATAGAGCACCTCTCAAACAAGAGGGTCTTCTGACTAGAGATTCCAGGATAGTGGAGAGGAAGAAACCTGGTCTCAAGAAAGCTCGCAAAGCTCCTCAATTTTCAAAACGTTAAGGTAGAAATTGTTATTTTATCCACACTTTCCGCAATATAACCTTCTGAACTATTAAACTTTCACGGGGTCTTGTGCAGTTCCTATGTAATGGGTGGTAAAATTGTTGAATCTGTGCATTTAGACATTATCAGCAATCCAGTTGTGTTCAGACCAAGAATATCCAATTATCTTTGTGGAACCTTCTGCACAATTAAACTTTCTTAGTAGTCTTGTTTGATTATGATCTGTGAACCTTCACTTTATTGATAGACTTTGACACTCTTAGATTTTGAGTCCAACGTATACTGGCACTCTGGATTCTTCTCTTAATATTTCTACACTGTAGTATGCTTACATGGAAGAGTACAGATAATCAACTTGTTTTTTGCTATCTATATCAGTTGTTTCAGTGAGCCATTGAGGAACTGTGAGACTAATTTGTTGAGACCTTTAATGCTCATCTTATCAGTGCGTGGTATATCTGCTGAAGTTAATCAATCCTACTTTCAATTTCCGTTGTTGTCGATATTGATTATCATAACAAACCATGGAGAATATCGACACGTGTCTATGTCAAATTTTTAAACTCTGATGTAATCACAGGATATTTACTAGCAGAGCCAAGTCAACAGAAGAAAGTCCAGGGAAGGCAAGTGAAGCTATGCTCAAGTGGATTAAGTTTCCTAAAGCTAACTCTGATATATTCGGAAACATTTTTTTGGTACTTTCACATTCTGTTATATGTAACTGGCACTTCCCTTTTTTGCCTTTGATATCATGAGTGGGAATAGATGCTTACTGTATATGTTTATCGAAGGGTGTAATCTTATACGTACCATCGTATGGTGAGTGAAAAATGTCCTCCTAATGCTCAATTTCTTGTTGCAGTCTTTCCGTTTTCTTCAAGTGAATAGCTCGATCATCTCTGATAATGCCTTCCTTCAATCTGAGTGTTAATCAAATTGGTCAAATTGGTTAGCACTGAAAGAGTTCTATCAAAACAGTCATATTAGATCAAAATCCTTAAGCTCAGTGGTATATATCCCTAACCCTAAAAAGATAGGAAAATACCTCATTTTCCCTTATAGGTTGTTAAACAAGATTGAGCTACGCTAACCAAACTGCGCTAAACGTCGTTTTACCTCCACCTTAAAATTCAGTTACACTGCTTGACCTCTAAAACAAATTCGCGTCAAGGGGTGAGACTAATAATGCTCCGACACCGCATCCTAATTGTGGAGATGCTTTAAAAAGGGGTTTCGCACCATTGTCCTCCGACCTATTTAACTTTCGCATGCTACAACTGTCACTTCGAGGAGACAATGAATGGAATGAACCAGACAATTATCAGAGAAGCTAATCTTGCTTTCGACAACTCAAAGACAGAGGAAAGGGGATCAAATTGATTGTCACAAGTCAATGAAAAACACTGTTCATGTTGCTTTTGAATTTGATTTTGGTGTGACATGGGGGTCGAATCCTTTTGGCAGCAACATTGTATGTTTTCGCTTTCTTTACAATTTTAATTCTTCTCTTCTTTTAACTGTCTTTGTTGTTCCTTCTTTGTACCCTTCCT

Coding sequence (CDS)

ATGGCGGTCTCAATTTCGTCACTCACATCATCCTTCGCTTCACTGTCATTCACCTCCAACCTCACTCCCAAACCCCAAACCTTACCCATGGCGCGCACCAAACCCTTCTCATTATCCAACCCAGCGGTCGTCAAACCACTTGTCATCACCGCAACATCCGCCACCGCACCGGTGGAAGTAGCTGAGACTGCCGACCTTGAGAAGTTTGTCAAGTCGCGTCTTCCGGGCGGGTTCGCAGCACAGACAGTAATTGGCACCGGAAGGCGAAAATGCGCCATTGCTAGGGTTGTTCTTCAAGAAGGAACTGGAAAATTTATTATTAATTACCGTGATGCTAAGGAATATCTTCAAGGAAACCCACTGTGGCTGCAATATGTGAAAACCCCCTTGGCTACTTTGGGTTATGAAACGAACTATGACGTCTTTGTTAAAGCACATGGTGGTGGGCTTTCTGGTCAAGCACAAGCAATATCTCTTGGTGTTGCCAGGGCATTGTTGAAGGTCAGTGCAAGTCATAGAGCACCTCTCAAACAAGAGGGTCTTCTGACTAGAGATTCCAGGATAGTGGAGAGGAAGAAACCTGGTCTCAAGAAAGCTCGCAAAGCTCCTCAATTTTCAAAACGTTAA

Protein sequence

MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEVAETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVERKKPGLKKARKAPQFSKR

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo21827.1	Spo21827.1	mRNA

Homology

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BLAST of Spo21827.1 vs. NCBI nr
Match: gi|902236357|gb|KNA24353.1| (hypothetical protein SOVF_016530 [Spinacia oleracea])

HSP 1 Score: 390.6 bits (1002), Expect = 1.700e-105
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 1

		  
Query: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60
           MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV
Sbjct: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60

Query: 61  AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP 120
           AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP
Sbjct: 61  AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP 120

Query: 121 LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG 180
           LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG
Sbjct: 121 LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG 180

Query: 181 LLTRDSRIVERKKPGLKKARKAPQFSKR 209
           LLTRDSRIVERKKPGLKKARKAPQFSKR
Sbjct: 181 LLTRDSRIVERKKPGLKKARKAPQFSKR 208

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BLAST of Spo21827.1 vs. NCBI nr
Match: gi|48428519|sp|P82278.1|RR9_SPIOL (RecName: Full=30S ribosomal protein S9, chloroplastic; Flags: Precursor)

HSP 1 Score: 375.6 bits (963), Expect = 5.800e-101
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1

		  
Query: 12  FASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEVAETADLEKFVK 71
           FASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEVAETADLEKFVK
Sbjct: 1   FASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEVAETADLEKFVK 60

Query: 72  SRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLA 131
           SRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLA
Sbjct: 61  SRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLA 120

Query: 132 TLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVER 191
           TLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVER
Sbjct: 121 TLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVER 180

Query: 192 KKPGLKKARKAPQFSKR 209
           KKPGLKKARKAPQFSKR
Sbjct: 181 KKPGLKKARKAPQFSKR 197

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BLAST of Spo21827.1 vs. NCBI nr
Match: gi|731314272|ref|XP_010684853.1| (PREDICTED: 30S ribosomal protein S9, chloroplastic [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 335.1 bits (858), Expect = 8.700e-89
Identity = 179/209 (85.65%), Postives = 194/209 (92.82%), Query Frame = 1

		  
Query: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITA-TSATAPVE 60
           MAVSISS+TSSF+SLSF+SNLT K Q LP+ARTK F LS+  VVKPL ITA +S+T P+E
Sbjct: 1   MAVSISSVTSSFSSLSFSSNLTSKSQILPVARTKSFPLSHSVVVKPLFITASSSSTTPLE 60

Query: 61  VAETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGN 120
             E+ DL+KFVKSRLPGGFAAQT+IGTGRRKCAIARVVLQEGTG+FIINYRDAK+YLQGN
Sbjct: 61  APESLDLQKFVKSRLPGGFAAQTIIGTGRRKCAIARVVLQEGTGQFIINYRDAKDYLQGN 120

Query: 121 PLWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQE 180
           PLWLQYVKTPLATLGYE NYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQE
Sbjct: 121 PLWLQYVKTPLATLGYEANYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQE 180

Query: 181 GLLTRDSRIVERKKPGLKKARKAPQFSKR 209
           GLLTRD+R+VERKK GLKKARKAPQFSKR
Sbjct: 181 GLLTRDARVVERKKVGLKKARKAPQFSKR 209

[Close]

BLAST of Spo21827.1 vs. NCBI nr
Match: gi|702238292|ref|XP_010024952.1| (PREDICTED: 30S ribosomal protein S9, chloroplastic [Eucalyptus grandis])

HSP 1 Score: 299.7 bits (766), Expect = 4.000e-78
Identity = 156/211 (73.93%), Postives = 179/211 (84.83%), Query Frame = 1

		  
Query: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60
           MA+S+SSL SS +SLSF+S ++PKP  L + R KP S+S P+   PL ++A++A AP   
Sbjct: 1   MALSVSSLASSLSSLSFSSQVSPKPNALALPRPKPLSVSLPSRASPLAVSASAAAAPAAA 60

Query: 61  A---ETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQ 120
               E ADL K+VKSRLPGGFAAQ++ GTGRRKCAIARVVLQEGTGK +INYRDAKEYLQ
Sbjct: 61  PSEPEAADLRKYVKSRLPGGFAAQSIFGTGRRKCAIARVVLQEGTGKVVINYRDAKEYLQ 120

Query: 121 GNPLWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLK 180
           GNPLWLQYVK PL TLGYE +YDVFVKAHGGGLSGQAQAISLG+ARALLKVS  HR+PL+
Sbjct: 121 GNPLWLQYVKVPLVTLGYENSYDVFVKAHGGGLSGQAQAISLGIARALLKVSEDHRSPLR 180

Query: 181 QEGLLTRDSRIVERKKPGLKKARKAPQFSKR 209
           +EGLLTRDSR+VERKK GLKKARKAPQFSKR
Sbjct: 181 EEGLLTRDSRVVERKKVGLKKARKAPQFSKR 211

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BLAST of Spo21827.1 vs. NCBI nr
Match: gi|1012335658|gb|KYP46981.1| (hypothetical protein KK1_031404 [Cajanus cajan])

HSP 1 Score: 299.7 bits (766), Expect = 4.000e-78
Identity = 159/208 (76.44%), Postives = 181/208 (87.02%), Query Frame = 1

		  
Query: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60
           MAVS+S+LT+S +SLSF+SN++ +P TL  ART+ FSLS  A    L+++AT+   P   
Sbjct: 1   MAVSLSALTTSLSSLSFSSNVSQRPNTLSFARTQSFSLSRFAKAPSLLVSATALAEP--- 60

Query: 61  AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP 120
            ETADL K+VKSRLPGGFAAQT+IGTGRRK AIARVVLQEGTGKFIINYRDAKEYLQGNP
Sbjct: 61  -ETADLRKYVKSRLPGGFAAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNP 120

Query: 121 LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG 180
           LWLQY+K PL TLGYE+NYDVFVKA GGGLSGQAQAISLG+ARALLKVS  HR+PL+QEG
Sbjct: 121 LWLQYIKVPLVTLGYESNYDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRSPLRQEG 180

Query: 181 LLTRDSRIVERKKPGLKKARKAPQFSKR 209
           LLTRDSR+VERKK GLKKARKAPQ+SKR
Sbjct: 181 LLTRDSRVVERKKVGLKKARKAPQYSKR 204

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BLAST of Spo21827.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RY17_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_016530 PE=3 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 1.200e-105
Identity = 208/208 (100.00%), Postives = 208/208 (100.00%), Query Frame = 1

		  
Query: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60
           MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV
Sbjct: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60

Query: 61  AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP 120
           AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP
Sbjct: 61  AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP 120

Query: 121 LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG 180
           LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG
Sbjct: 121 LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG 180

Query: 181 LLTRDSRIVERKKPGLKKARKAPQFSKR 209
           LLTRDSRIVERKKPGLKKARKAPQFSKR
Sbjct: 181 LLTRDSRIVERKKPGLKKARKAPQFSKR 208

[Close]

BLAST of Spo21827.1 vs. UniProtKB/TrEMBL
Match: A0A0J8FUL4_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_1g013870 PE=3 SV=1)

HSP 1 Score: 335.1 bits (858), Expect = 6.000e-89
Identity = 179/209 (85.65%), Postives = 194/209 (92.82%), Query Frame = 1

		  
Query: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITA-TSATAPVE 60
           MAVSISS+TSSF+SLSF+SNLT K Q LP+ARTK F LS+  VVKPL ITA +S+T P+E
Sbjct: 1   MAVSISSVTSSFSSLSFSSNLTSKSQILPVARTKSFPLSHSVVVKPLFITASSSSTTPLE 60

Query: 61  VAETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGN 120
             E+ DL+KFVKSRLPGGFAAQT+IGTGRRKCAIARVVLQEGTG+FIINYRDAK+YLQGN
Sbjct: 61  APESLDLQKFVKSRLPGGFAAQTIIGTGRRKCAIARVVLQEGTGQFIINYRDAKDYLQGN 120

Query: 121 PLWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQE 180
           PLWLQYVKTPLATLGYE NYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQE
Sbjct: 121 PLWLQYVKTPLATLGYEANYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQE 180

Query: 181 GLLTRDSRIVERKKPGLKKARKAPQFSKR 209
           GLLTRD+R+VERKK GLKKARKAPQFSKR
Sbjct: 181 GLLTRDARVVERKKVGLKKARKAPQFSKR 209

[Close]

BLAST of Spo21827.1 vs. UniProtKB/TrEMBL
Match: A0A151RWQ2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_031404 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.800e-78
Identity = 159/208 (76.44%), Postives = 181/208 (87.02%), Query Frame = 1

		  
Query: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60
           MAVS+S+LT+S +SLSF+SN++ +P TL  ART+ FSLS  A    L+++AT+   P   
Sbjct: 1   MAVSLSALTTSLSSLSFSSNVSQRPNTLSFARTQSFSLSRFAKAPSLLVSATALAEP--- 60

Query: 61  AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP 120
            ETADL K+VKSRLPGGFAAQT+IGTGRRK AIARVVLQEGTGKFIINYRDAKEYLQGNP
Sbjct: 61  -ETADLRKYVKSRLPGGFAAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNP 120

Query: 121 LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG 180
           LWLQY+K PL TLGYE+NYDVFVKA GGGLSGQAQAISLG+ARALLKVS  HR+PL+QEG
Sbjct: 121 LWLQYIKVPLVTLGYESNYDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRSPLRQEG 180

Query: 181 LLTRDSRIVERKKPGLKKARKAPQFSKR 209
           LLTRDSR+VERKK GLKKARKAPQ+SKR
Sbjct: 181 LLTRDSRVVERKKVGLKKARKAPQYSKR 204

[Close]

BLAST of Spo21827.1 vs. UniProtKB/TrEMBL
Match: A0A059DCD8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A00474 PE=3 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.800e-78
Identity = 156/211 (73.93%), Postives = 179/211 (84.83%), Query Frame = 1

		  
Query: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60
           MA+S+SSL SS +SLSF+S ++PKP  L + R KP S+S P+   PL ++A++A AP   
Sbjct: 1   MALSVSSLASSLSSLSFSSQVSPKPNALALPRPKPLSVSLPSRASPLAVSASAAAAPAAA 60

Query: 61  A---ETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQ 120
               E ADL K+VKSRLPGGFAAQ++ GTGRRKCAIARVVLQEGTGK +INYRDAKEYLQ
Sbjct: 61  PSEPEAADLRKYVKSRLPGGFAAQSIFGTGRRKCAIARVVLQEGTGKVVINYRDAKEYLQ 120

Query: 121 GNPLWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLK 180
           GNPLWLQYVK PL TLGYE +YDVFVKAHGGGLSGQAQAISLG+ARALLKVS  HR+PL+
Sbjct: 121 GNPLWLQYVKVPLVTLGYENSYDVFVKAHGGGLSGQAQAISLGIARALLKVSEDHRSPLR 180

Query: 181 QEGLLTRDSRIVERKKPGLKKARKAPQFSKR 209
           +EGLLTRDSR+VERKK GLKKARKAPQFSKR
Sbjct: 181 EEGLLTRDSRVVERKKVGLKKARKAPQFSKR 211

[Close]

BLAST of Spo21827.1 vs. UniProtKB/TrEMBL
Match: A0A0B2QI75_GLYSO (30S ribosomal protein S9, chloroplastic OS=Glycine soja GN=glysoja_009318 PE=3 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 1.200e-76
Identity = 158/208 (75.96%), Postives = 179/208 (86.06%), Query Frame = 1

		  
Query: 1   MAVSISSLTSSFASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEV 60
           MAVS+S+LT+S +SLSF+S+++ +P TL  ART+  SLS       LV+TAT+   P   
Sbjct: 1   MAVSLSALTTSLSSLSFSSHISQRPCTLSFARTESLSLSVSPSPSSLVVTATALAEP--- 60

Query: 61  AETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNP 120
            ET DL+K+VKSRLPGGFAAQT+IGTGRRK AIARVVLQEGTGKFIINYRDAKEYLQGNP
Sbjct: 61  -ETEDLKKYVKSRLPGGFAAQTIIGTGRRKSAIARVVLQEGTGKFIINYRDAKEYLQGNP 120

Query: 121 LWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEG 180
           LWLQY+K PL TLGYE+NYDVFVKA GGGLSGQAQAISLG+ARALLKVS  HRAPL+QEG
Sbjct: 121 LWLQYIKVPLITLGYESNYDVFVKAEGGGLSGQAQAISLGIARALLKVSEDHRAPLRQEG 180

Query: 181 LLTRDSRIVERKKPGLKKARKAPQFSKR 209
           LLTRDSR+VERKK GLKKARKAPQ+SKR
Sbjct: 181 LLTRDSRVVERKKVGLKKARKAPQYSKR 204

[Close]

BLAST of Spo21827.1 vs. ExPASy Swiss-Prot
Match: RR9_SPIOL (30S ribosomal protein S9, chloroplastic (Fragment) OS=Spinacia oleracea GN=PRPS9 PE=1 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 3.600e-103
Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 1

		  
Query: 12  FASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEVAETADLEKFVK 71
           FASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEVAETADLEKFVK
Sbjct: 1   FASLSFTSNLTPKPQTLPMARTKPFSLSNPAVVKPLVITATSATAPVEVAETADLEKFVK 60

Query: 72  SRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLA 131
           SRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLA
Sbjct: 61  SRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLA 120

Query: 132 TLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVER 191
           TLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVER
Sbjct: 121 TLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVER 180

Query: 192 KKPGLKKARKAPQFSKR 209
           KKPGLKKARKAPQFSKR
Sbjct: 181 KKPGLKKARKAPQFSKR 197

[Close]

BLAST of Spo21827.1 vs. ExPASy Swiss-Prot
Match: RR9_ARATH (30S ribosomal protein S9, chloroplastic OS=Arabidopsis thaliana GN=RPS9 PE=2 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 1.500e-72
Identity = 145/206 (70.39%), Postives = 170/206 (82.52%), Query Frame = 1

		  
Query: 4   SISSLTSSFASLSFTSNLTPKPQTLPMARTKP-FSLSNPAVVKPLVITATSATAPVEVAE 63
           SI++L SS +SLSF+S ++ +P T+   R    F+L   +  +  +    + +AP E  E
Sbjct: 3   SITNLASSLSSLSFSSQVSQRPNTISFPRANSVFALPAKSARRASLSITATVSAPPEEEE 62

Query: 64  TADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLW 123
             +L+K+VKSRLPGGFAAQ +IGTGRRKCAIARVVLQEGTGK IINYRDAKEYLQGNPLW
Sbjct: 63  IVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 122

Query: 124 LQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLL 183
           LQYVK PL TLGYE +YD+FVKAHGGGLSGQAQAI+LGVARALLKVSA HR+PLK+EGLL
Sbjct: 123 LQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLL 182

Query: 184 TRDSRIVERKKPGLKKARKAPQFSKR 209
           TRD+R+VERKK GLKKARKAPQFSKR
Sbjct: 183 TRDARVVERKKAGLKKARKAPQFSKR 208

[Close]

BLAST of Spo21827.1 vs. ExPASy Swiss-Prot
Match: RR9_MESVI (30S ribosomal protein S9, chloroplastic OS=Mesostigma viride GN=rps9 PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.500e-35
Identity = 81/125 (64.80%), Postives = 94/125 (75.20%), Query Frame = 1

		  
Query: 84  IGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLATLGYETNYDVFV 143
           +GTGRRK A+ARV L  G G+ IIN      YLQ N  +L  V++PL TLG E NYD+ V
Sbjct: 13  LGTGRRKSAVARVRLVPGNGEVIINGLPGTNYLQFNGSYLSAVRSPLETLGLEDNYDIIV 72

Query: 144 KAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVERKKPGLKKARKAP 203
           KA GGGL+GQA+AI LGVARAL  +  S+R PLK+EG LTRDSR+ ERKK GLKKARKAP
Sbjct: 73  KAVGGGLTGQAEAIRLGVARALCTIDTSNRHPLKKEGFLTRDSRVKERKKYGLKKARKAP 132

Query: 204 QFSKR 209
           QFSKR
Sbjct: 133 QFSKR 137

[Close]

BLAST of Spo21827.1 vs. ExPASy Swiss-Prot
Match: RS9_THEEB (30S ribosomal protein S9 OS=Thermosynechococcus elongatus (strain BP-1) GN=rpsI PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.700e-34
Identity = 75/125 (60.00%), Postives = 94/125 (75.20%), Query Frame = 1

		  
Query: 84  IGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLATLGYETNYDVFV 143
           +GTGRRK A+ARV L  G+G+  IN R+  +YLQ NP++L  VK PL TLG E +YD++V
Sbjct: 13  LGTGRRKSAVARVRLIPGSGQLWINGRNGADYLQNNPIYLNLVKAPLETLGLENSYDIYV 72

Query: 144 KAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVERKKPGLKKARKAP 203
            A GGGL+GQA AI LG+ARAL ++   +R PLK EG LTRD R  ER+K GL+KARKAP
Sbjct: 73  NATGGGLTGQADAIRLGIARALCQLDIENRKPLKTEGYLTRDPRAKERRKYGLRKARKAP 132

Query: 204 QFSKR 209
           Q+SKR
Sbjct: 133 QYSKR 137

[Close]

BLAST of Spo21827.1 vs. ExPASy Swiss-Prot
Match: RS9_SYNJA (30S ribosomal protein S9 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpsI PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.400e-33
Identity = 78/124 (62.90%), Postives = 89/124 (71.77%), Query Frame = 1

		  
Query: 85  GTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLWLQYVKTPLATLGYETNYDVFVK 144
           GTGRRK A+ARV L  GTGK IIN R   +YLQ     L  VK PL  LG E +YD+ V+
Sbjct: 14  GTGRRKTAVARVRLVPGTGKLIINDRPGDQYLQYQEALLASVKAPLELLGLENSYDILVR 73

Query: 145 AHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLLTRDSRIVERKKPGLKKARKAPQ 204
           AHGGG+ GQA AI LGVARAL +V  ++R PLK EG L RD R VERKK GL+KARKAPQ
Sbjct: 74  AHGGGVHGQADAIKLGVARALCEVDPANRGPLKTEGYLKRDPRAVERKKYGLRKARKAPQ 133

Query: 205 FSKR 209
           +SKR
Sbjct: 134 YSKR 137

[Close]

BLAST of Spo21827.1 vs. TAIR (Arabidopsis)
Match: AT1G74970.1 (ribosomal protein S9)

HSP 1 Score: 273.9 bits (699), Expect = 8.400e-74
Identity = 145/206 (70.39%), Postives = 170/206 (82.52%), Query Frame = 1

		  
Query: 4   SISSLTSSFASLSFTSNLTPKPQTLPMARTKP-FSLSNPAVVKPLVITATSATAPVEVAE 63
           SI++L SS +SLSF+S ++ +P T+   R    F+L   +  +  +    + +AP E  E
Sbjct: 3   SITNLASSLSSLSFSSQVSQRPNTISFPRANSVFALPAKSARRASLSITATVSAPPEEEE 62

Query: 64  TADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDAKEYLQGNPLW 123
             +L+K+VKSRLPGGFAAQ +IGTGRRKCAIARVVLQEGTGK IINYRDAKEYLQGNPLW
Sbjct: 63  IVELKKYVKSRLPGGFAAQKIIGTGRRKCAIARVVLQEGTGKVIINYRDAKEYLQGNPLW 122

Query: 124 LQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASHRAPLKQEGLL 183
           LQYVK PL TLGYE +YD+FVKAHGGGLSGQAQAI+LGVARALLKVSA HR+PLK+EGLL
Sbjct: 123 LQYVKVPLVTLGYENSYDIFVKAHGGGLSGQAQAITLGVARALLKVSADHRSPLKKEGLL 182

Query: 184 TRDSRIVERKKPGLKKARKAPQFSKR 209
           TRD+R+VERKK GLKKARKAPQFSKR
Sbjct: 183 TRDARVVERKKAGLKKARKAPQFSKR 208

[Close]

BLAST of Spo21827.1 vs. TAIR (Arabidopsis)
Match: AT3G49080.1 (Ribosomal protein S5 domain 2-like superfamily protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.600e-19
Identity = 63/156 (40.38%), Postives = 85/156 (54.49%), Query Frame = 1

		  
Query: 53  SATAPVEVAETADLEKFVKSRLPGGFAAQTVIGTGRRKCAIARVVLQEGTGKFIINYRDA 112
           S+ A +E+    D+    K+R+          GTGRRKC+IARV +Q G GKF +N ++ 
Sbjct: 279 SSRAEIELQMQEDI---AKARVRQVDETGRAYGTGRRKCSIARVWIQPGEGKFQVNEKEF 338

Query: 113 KEYLQGNPLWLQYVKTPLATLGYETNYDVFVKAHGGGLSGQAQAISLGVARALLKVSASH 172
             Y          ++ PLA       +D+     GGG +GQ  AI LG++RAL       
Sbjct: 339 DVYFPMLDHRAALLR-PLAETKTLGRWDIKCTVKGGGTTGQVGAIQLGISRALQNWEPDM 398

Query: 173 RAPLKQEGLLTRDSRIVERKKPGLKKARKAPQFSKR 209
           R  L+  G LTRDSR+VERKKPG  KARK+ Q+ KR
Sbjct: 399 RTSLRAAGFLTRDSRVVERKKPGKAKARKSFQWVKR 430

The following BLAST results are available for this feature:

BLAST of Spo21827.1 vs. NCBI nr
BLAST of Spo21827.1 vs. UniProtKB/TrEMBL
BLAST of Spo21827.1 vs. ExPASy Swiss-Prot
BLAST of Spo21827.1 vs. TAIR (Arabidopsis)

BLAST of Spo21827.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902236357\|gb\|KNA24353.1\|	1.7e-105	100.	hypothetical protein SOVF_0165...	[more]
gi\|48428519\|sp\|P82278.1\|RR9_SPIOL	5.8e-101	100.	RecName: Full=30S ribosomal pr...	[more]
gi\|731314272\|ref\|XP_010684853.1\|	8.7e-89	85.6	PREDICTED: 30S ribosomal prote...	[more]
gi\|702238292\|ref\|XP_010024952.1\|	4.0e-78	73.9	PREDICTED: 30S ribosomal prote...	[more]
gi\|1012335658\|gb\|KYP46981.1\|	4.0e-78	76.4	hypothetical protein KK1_03140...	[more]

BLAST of Spo21827.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9RY17_SPIOL	1.2e-105	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8FUL4_BETVU	6.0e-89	85.6	Uncharacterized protein OS=Bet...	[more]
A0A151RWQ2_CAJCA	2.8e-78	76.4	Uncharacterized protein OS=Caj...	[more]
A0A059DCD8_EUCGR	2.8e-78	73.9	Uncharacterized protein OS=Euc...	[more]
A0A0B2QI75_GLYSO	1.2e-76	75.9	30S ribosomal protein S9, chlo...	[more]

BLAST of Spo21827.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
RR9_SPIOL	3.6e-103	100.	30S ribosomal protein S9, chlo...	[more]
RR9_ARATH	1.5e-72	70.3	30S ribosomal protein S9, chlo...	[more]
RR9_MESVI	2.5e-35	64.8	30S ribosomal protein S9, chlo...	[more]
RS9_THEEB	2.7e-34	60.0	30S ribosomal protein S9 OS=Th...	[more]
RS9_SYNJA	1.4e-33	62.9	30S ribosomal protein S9 OS=Sy...	[more]

BLAST of Spo21827.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

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x 1


Match Name	E-value	Identity	Description
AT1G74970.1	8.4e-74	70.3	ribosomal protein S9	[more]
AT3G49080.1	2.6e-19	40.3	Ribosomal protein S5 domain 2-...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000754	Ribosomal protein S9	PANTHER	PTHR21569	RIBOSOMAL PROTEIN S9	coord: 1..208 score: 1.7E
IPR000754	Ribosomal protein S9	PFAM	PF00380	Ribosomal_S9	coord: 87..208 score: 5.5
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 81..208 score: 4.5
IPR020568	Ribosomal protein S5 domain 2-type fold	unknown	SSF54211	Ribosomal protein S5 domain 2-like	coord: 82..208 score: 5.31
IPR020574	Ribosomal protein S9, conserved site	PROSITE	PS00360	RIBOSOMAL_S9	coord: 147..165 scor
IPR023035	Ribosomal protein S9, bacterial/plastid	HAMAP	MF_00532_B	Ribosomal_S9_B	coord: 78..208 score: 31
None	No IPR available	PANTHER	PTHR21569:SF2	30S RIBOSOMAL PROTEIN S9, CHLOROPLASTIC	coord: 1..208 score: 1.7E

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0006285	base-excision repair, AP site formation
biological_process	GO:0008361	regulation of cell size
biological_process	GO:0010075	regulation of meristem growth
biological_process	GO:0006412	translation
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009073	aromatic amino acid family biosynthetic process
biological_process	GO:0016226	iron-sulfur cluster assembly
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0000737	DNA catabolic process, endonucleolytic
biological_process	GO:0009832	plant-type cell wall biogenesis
biological_process	GO:0006306	DNA methylation
biological_process	GO:0006289	nucleotide-excision repair
biological_process	GO:0006749	glutathione metabolic process
biological_process	GO:0019852	L-ascorbic acid metabolic process
biological_process	GO:0010731	protein glutathionylation
biological_process	GO:0010583	response to cyclopentenone
biological_process	GO:0009636	response to toxic substance
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0009407	toxin catabolic process
biological_process	GO:0009664	plant-type cell wall organization
biological_process	GO:0010015	root morphogenesis
biological_process	GO:0007389	pattern specification process
biological_process	GO:0009926	auxin polar transport
biological_process	GO:0048653	anther development
biological_process	GO:0009231	riboflavin biosynthetic process
biological_process	GO:0009867	jasmonic acid mediated signaling pathway
biological_process	GO:0006007	glucose catabolic process
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0016020	membrane
cellular_component	GO:0000312	plastid small ribosomal subunit
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009579	thylakoid
cellular_component	GO:0009571	proplastid stroma
cellular_component	GO:0009349	riboflavin synthase complex
molecular_function	GO:0031177	phosphopantetheine binding
molecular_function	GO:0004364	glutathione transferase activity
molecular_function	GO:0045174	glutathione dehydrogenase (ascorbate) activity
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0000906	6,7-dimethyl-8-ribityllumazine synthase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0008534	oxidized purine nucleobase lesion DNA N-glycosylase activity
molecular_function	GO:0003684	damaged DNA binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0005515	protein binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo19407	0.80	Barchart \| Table
Spo01967	0.78	Barchart \| Table
Spo16436	0.75	Barchart \| Table
Spo23921	0.74	Barchart \| Table
Spo05231	0.74	Barchart \| Table
Spo19827	0.72	Barchart \| Table
Spo00538	0.71	Barchart \| Table
Spo25655	0.71	Barchart \| Table
Spo24771	0.70	Barchart \| Table
Spo25503	0.70	Barchart \| Table
Spo13836	0.69	Barchart \| Table
Spo09460	0.69	Barchart \| Table
Spo09210	0.67	Barchart \| Table
Spo19305	0.67	Barchart \| Table
Spo10817	0.66	Barchart \| Table
Spo05708	0.66	Barchart \| Table
Spo02751	0.66	Barchart \| Table