Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCCAACCAGTACACGCTACTCAACCGTTAACTACTACCCGCTACCGCTACTTTTGACGAACAGGGCCTATGTCGTCTTGAGATACGAAAGTACGAAAACGCCCCTGAGAGGTTGAGGAGGATAGAATTCCTCAATTTATCAGTGCTCGGTGGAAGAACGTTGAGAGCAAAAGGGGTCTGTAAAAATGACATCTGTGGTAGCGATTACTCTTTCACTACCGCCGGCAAAATACTCGCCGGAAAATACATCGACGTTTACTTCTGCCAAATTCGGCGCTTCATCCTCATTCTCCCACCGCTGTTCCCCTTTCTACCCTCTCTCCTTCCGCCGCCTTGCCATTCAACACACTGACGCCGTCGTCCGCCGTCGCTCCTCTTCTTCCTTTCGCTGTTTCTCCGGTAAGTCTATTTCCGTCATAATCCTTTTCAATCGTTCTTCAATGAATTCGTTAATTTCTTGTAGTTTGCGTCGATTTTGCTTTTTTTGTAACTATTATTCTGATTTCATGCTGAAATCCTTTGCCTGTTCTGTGATTTCTTGACTTTTGGCCCTTTAATTTAGTGAAAATCGATATGGATTGACCAATTTGGATGCCTCGTCTATCTTACAGTATGGTAGAACTGTTGTCAATTATCATTACTGTTCTGTGTTTTAACGGCCTACTGTTTGGTGTTGATTAGCCTAAGGAGTAAGGACATGGTTAAAAGTTGGAAATTCGAATTAATATGCACAAATTTCAACATTTGATTCTATTTTTGCTGATTTCAAGCTATGTACTTCAAAACATTCTGGTAGTTGGGGTTTGGGAATGGGTTATTGCCTACTTGGTGATCCTAATCGCGAATAACTGAACTGTTTTTAGCTAAATTTCCTTGGGAAATCAGAATTAATTTGATCAATGGCTACCTAAATCATGTTCTCCATGTATTCATAATGTATATGTATATCTTTATAGAAGAAGATAATGGGTTATGAGCCAATAAATTGTACAGGAGAGTAGATGGAATCCCTATTCACATGGGAGAACAGATAGAGGATAATTCCGACCATGAACGATTTCCCCTTGATTCTTGTCAAAAGATTTAGAGGAAAATTACACAAATTAAACTCTATGACAGCATTACTAATTGCTTATTATCTCCATGAGAAAGATCTTTATCCTCGAGGGTAAAAATTATCTGAGGGATCCCTTGGAATGCGGTAAATGTTGAGAATTAGAAGTCTATTTTTGAAGGGATTGGTCCATGAACAAATCCCTAGTGATTCTACGGAAGTCGTGACAATACTCTTCTTTAGAATGTTATGGCTAAATTGTAGTGTATTCTACCATGAGATATTCCTGTCCTATACTATCAACTGTTGAGAAGGCTTCTGCAACAAGGATAAGATTATAGGATTAATGATAGTTGATTCTGTTGGGAATTAGTGATTGCTAACTTACCTCTCAATCTCACACTCTCTCACCTAAACCCTAAGTCTTTGAGATTACATTGAGGTTACATCTTTGCTCATTCTCTTACACATTTGCATAACCTTATTACAAGGTTTACATGAGTACATATAGTGTAAGATGACAAGATCTAAAGACAAAGAAACGATGAGGATTGAGCCACGTAGAAGTAGAAGCTCGAATTATAACTCCTCTCTTTATACCAATGTATAAAAAGGCTCAAGGCGCAACAAGGCGATTTGGAGTTCCCAGCACCTTAGGCGCGCCTCGTTGCGCCTCGGTGCGCCTCATTGAAGTGAGGCGCCCTAATAAAAAGTAAAAAAAAAAAGTGAAAAAATGGTCTGTGCCTTGGTAAGTGCGCCTTTTTGCGCCTCAAAGTGCGTCTTTTTGCGCCTTGGTGCGCCTTTTTGCGCCTTAGGTGCGCCTCATCGAAATCGCCTCGCCTAGACAATAAAAGGCGCTGGCTCCAATCGCCTTGCGCCTCAGAGCCTAGGCGCGCCTTTTTATACACTGCTTTATACTAGCGCTCTCAAGCTAAAGTAGGTGGATCGGTGGATCCCACTCGTTCAAAGTTGCCGAAGAAGCGAAGCTGAGGCAATAAAGTTTCGTCCGAACGTTGAGTCAGTACCAGGAGTTTTTCTTGCTCAGGTTTGTCCGAACCAATCCCGGTTTGTCCGAACCAATGCCTTAGTCCTCCACCTTAGTTTTCCTTGAACCCATTCTCTACACTTTTCAAAACCCAACAGTAAGCATCATGCATGTTCTTCTAGTCTTTCTGATTTCATCTTTTAAGCCCGTGTTAAACCAACTGATTGCATAAGATTAAAAAAATTCTGTTATAATTATTAGCCTATCGAATTCTTCATGAATTGTCTCAGTTTTGCTTAAGATTCTTCATTCTGCTACTGGACCATTGATGTATTTGGGATCAGCTACCACCACGAGCTGAGAATCGAACGGCTTTGATACCAACCTTTTGGAAAAATTAACTGCCAATTTATCATGTTTAAGAAAGGAACATGTGTCAGTGGATAAGGGGACAGATGTCAGAGTGTCAGTGTCGTTGAGTTGATTACTTGCATGATATGAAGAAAAGAAGTGAAAGATATCAAGGAGAGGAATTAATACATTTCTCATTCATACGGCTGCAATGAGCCTACAAGCTTACATATAGAAAGCTAACCCCCGTACTGAGTAGTTTTCTCCTTAATTACTGCAGAAAATAATAAAGAAAAATAACATAAAGCAGTCTCCCAATCATGTGCTCCTGTAATGATCTAGCAGTTTTGACTGAAGTATAAGCTAGTAATACCCTGCTGTGTAATTTATGCAGCTATCTCCCCCGAATTGAAAACTACAATCGACAAAGTTGTGAGTTCACACAAAGTGATTCTGTTTATGAAGGGAACCAGGGATTTTCCTCAATGTGGATTTTCCAATACTGTTGTACAGATATTGAAGTCTCTCAATGTGCCTTTTGAAACTATCAACATTCTTGAAAATGAGTTTCTGCGTCAAGGGTTGAAGGAGTACTCAAGTTGGCCGACCTTTCCGCAGCTTTATATTGATGGTGAATTCTTTGGTGGCTGTGACATCACGATCGGTGAGTTTTTTTCTGGAACTCTTTAGAATCAGTTGACTTGTCTTCATTTTGTTGCTTTTCTGAATTAGCTTCATTATGACATAATGGCTTCATGTGAGTTGAAGTTTTTCTGTGATCTTAGCTGTAGTAGAAACAAAGCTTCACCCAACTCTGCTTCTTGTTGGATGAAAAGTTATTAGCACAATTGGAAGCTTAATTAACTGAAACTGTTACTACAACTTGACTACATGTTAGAATACTATGTGAAGGATTGTCTATTTCCTATTAATAGAATACTTTTGCCCTCAACATAACTCTTTCAGCTTCTTTCACAAGAATTTATACTAAAAGGTAGACTGGGACTAACTACATTTTAAAGTTGCAAGTCTTGGTAATTTAATCTACTAAAGTTAGACTAGGACTACCTTTTGAAGTAGTCACTAACAAATCCTTAGTTTTTTAGATTAATATCACTCCCTATGTCCCGTTGTATTTGGCCAAACGGCCAACTTCCGTAATTTGAAATGTCCCAAATAAAAAGGTGCTCCACTTTGATTCATTATAAACTTAGCTTCTCACATCTCATATCAAAAGGTCTATTTTGGTTGTTCAATGTTAGTTCATCTTATCAACTTCTTCCACTTCGACTGAATAAGATGTATGTTGATCTGTTGGTTAAATATCGCTCGTCAATAATACTTTTTAGTATTTCTTGAGAAGCGCCTGAGACTTGGATTAGCTTAGCTTCTGCTTGAATAAAGGTTACATTTTCTTATTTTGTAAATACAAGTTAGGAAATATTGTTGTGTTTGCCTATAAATACCTCTAGGCTGTAAAATTTTTGACTTATGCTTTGGACATATCTTGAACTTTTAAGAATTCCCTCTGTCCCTATTTGTTTTTGCCCCATATTCTATTTTGGTCAGTCCCTTAAAATTGCCCCGTTTCCTTATATTGTAACATTTCCCCACCATTTTACCCCACTTGCATAGACTCATAAAGTTGTAAAAGACAAAGATGCCCCCTCTTCCTTACACATTTTGGCCAAAGTCTAAATAAAGCACATTTTGTCTATGGAGCAAACAATTAGGGACATAGGAAGTATAGGGTAGGTAGTTTTACTTTCCAGCTCTGTAATTTACATTAGTTAGTGCTACTTAAGGTTCACTGACCTAAAGTATTGTTTTTTTGTTACTGCTTCTTAAAGTTCACCGATAAAAGTAAATTCGAGTTATGTTGTTGCTTTGAGCTCGTTTCTAGGTAAAGAAAACGCGTAAAAAACATAATGAAACTTTTGGTGAAAACCCCAGAAAACTAGAATCATTGTTGCGTTATATTTGTTGTTGATTGAAAATCTTTTCTGAATCCATGTTTTCCTTTTACAGAAGCGCTCAAAAGTGGGGAGTTGCAAGAAACGGTGGAGAAGGCTATGTGCTCGTGATGCGAAATGAACGATTTGTAAAGCCTTTTTCGATACAAATTTATAATTTGGTTGACTGATACACGTTAATAATTATCATCTGTTACATTTTTAGTTTTGTATTAGAAGCAGTAAATGTTTATAGTATTTGCAAGGATTCTAATTACATTTATGGACAGTACCAATGGTTTGTTATATAGAAGCCGGCCCTTTATTGGCTAAGAAACCCTTTAACAGTTTAACTGATGCATTTGCTTGCTCTACTGCTCTACTAGTACTATCCACTTATCAAGGCAAAACTACTTTTGTTAGG TCCAACCAGTACACGCTACTCAACCGTTAACTACTACCCGCTACCGCTACTTTTGACGAACAGGGCCTATGTCGTCTTGAGATACGAAAGTACGAAAACGCCCCTGAGAGGTTGAGGAGGATAGAATTCCTCAATTTATCAGTGCTCGGTGGAAGAACGTTGAGAGCAAAAGGGGTCTGTAAAAATGACATCTGTGGTAGCGATTACTCTTTCACTACCGCCGGCAAAATACTCGCCGGAAAATACATCGACGTTTACTTCTGCCAAATTCGGCGCTTCATCCTCATTCTCCCACCGCTGTTCCCCTTTCTACCCTCTCTCCTTCCGCCGCCTTGCCATTCAACACACTGACGCCGTCGTCCGCCGTCGCTCCTCTTCTTCCTTTCGCTGTTTCTCCGCTATCTCCCCCGAATTGAAAACTACAATCGACAAAGTTGTGAGTTCACACAAAGTGATTCTGTTTATGAAGGGAACCAGGGATTTTCCTCAATGTGGATTTTCCAATACTGTTGTACAGATATTGAAGTCTCTCAATGTGCCTTTTGAAACTATCAACATTCTTGAAAATGAGTTTCTGCGTCAAGGGTTGAAGGAGTACTCAAGTTGGCCGACCTTTCCGCAGCTTTATATTGATGGTGAATTCTTTGGTGGCTGTGACATCACGATCGAAGCGCTCAAAAGTGGGGAGTTGCAAGAAACGGTGGAGAAGGCTATGTGCTCGTGATGCGAAATGAACGATTTGTAAAGCCTTTTTCGATACAAATTTATAATTTGGTTGACTGATACACGTTAATAATTATCATCTGTTACATTTTTAGTTTTGTATTAGAAGCAGTAAATGTTTATAGTATTTGCAAGGATTCTAATTACATTTATGGACAGTACCAATGGTTTGTTATATAGAAGCCGGCCCTTTATTGGCTAAGAAACCCTTTAACAGTTTAACTGATGCATTTGCTTGCTCTACTGCTCTACTAGTACTATCCACTTATCAAGGCAAAACTACTTTTGTTAGG ATGACATCTGTGGTAGCGATTACTCTTTCACTACCGCCGGCAAAATACTCGCCGGAAAATACATCGACGTTTACTTCTGCCAAATTCGGCGCTTCATCCTCATTCTCCCACCGCTGTTCCCCTTTCTACCCTCTCTCCTTCCGCCGCCTTGCCATTCAACACACTGACGCCGTCGTCCGCCGTCGCTCCTCTTCTTCCTTTCGCTGTTTCTCCGCTATCTCCCCCGAATTGAAAACTACAATCGACAAAGTTGTGAGTTCACACAAAGTGATTCTGTTTATGAAGGGAACCAGGGATTTTCCTCAATGTGGATTTTCCAATACTGTTGTACAGATATTGAAGTCTCTCAATGTGCCTTTTGAAACTATCAACATTCTTGAAAATGAGTTTCTGCGTCAAGGGTTGAAGGAGTACTCAAGTTGGCCGACCTTTCCGCAGCTTTATATTGATGGTGAATTCTTTGGTGGCTGTGACATCACGATCGAAGCGCTCAAAAGTGGGGAGTTGCAAGAAACGGTGGAGAAGGCTATGTGCTCGTGA MTSVVAITLSLPPAKYSPENTSTFTSAKFGASSSFSHRCSPFYPLSFRRLAIQHTDAVVRRRSSSSFRCFSAISPELKTTIDKVVSSHKVILFMKGTRDFPQCGFSNTVVQILKSLNVPFETINILENEFLRQGLKEYSSWPTFPQLYIDGEFFGGCDITIEALKSGELQETVEKAMCS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo21500.1 vs. NCBI nr
Match: gi|902235554|gb|KNA23970.1| (hypothetical protein SOVF_020410 [Spinacia oleracea]) HSP 1 Score: 358.2 bits (918), Expect = 8.200e-96 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1
BLAST of Spo21500.1 vs. NCBI nr
Match: gi|731342041|ref|XP_010682198.1| (PREDICTED: monothiol glutaredoxin-S14, chloroplastic [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 237.7 bits (605), Expect = 1.600e-59 Identity = 132/186 (70.97%), Postives = 149/186 (80.11%), Query Frame = 1
BLAST of Spo21500.1 vs. NCBI nr
Match: gi|388518093|gb|AFK47108.1| (unknown [Lotus japonicus]) HSP 1 Score: 219.5 bits (558), Expect = 4.600e-54 Identity = 111/172 (64.53%), Postives = 136/172 (79.07%), Query Frame = 1
BLAST of Spo21500.1 vs. NCBI nr
Match: gi|747101696|ref|XP_011098986.1| (PREDICTED: monothiol glutaredoxin-S7, chloroplastic [Sesamum indicum]) HSP 1 Score: 219.2 bits (557), Expect = 6.000e-54 Identity = 99/118 (83.90%), Postives = 114/118 (96.61%), Query Frame = 1
BLAST of Spo21500.1 vs. NCBI nr
Match: gi|848887708|ref|XP_012844077.1| (PREDICTED: monothiol glutaredoxin-S7, chloroplastic [Erythranthe guttata]) HSP 1 Score: 218.0 bits (554), Expect = 1.300e-53 Identity = 110/165 (66.67%), Postives = 129/165 (78.18%), Query Frame = 1
BLAST of Spo21500.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RWR0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_020410 PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 5.700e-96 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1
BLAST of Spo21500.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C6H1_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g146220 PE=4 SV=1) HSP 1 Score: 237.7 bits (605), Expect = 1.100e-59 Identity = 132/186 (70.97%), Postives = 149/186 (80.11%), Query Frame = 1
BLAST of Spo21500.1 vs. UniProtKB/TrEMBL
Match: I3T3L6_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 219.5 bits (558), Expect = 3.200e-54 Identity = 111/172 (64.53%), Postives = 136/172 (79.07%), Query Frame = 1
BLAST of Spo21500.1 vs. UniProtKB/TrEMBL
Match: A0A022QVE9_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a014731mg PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 9.300e-54 Identity = 110/165 (66.67%), Postives = 129/165 (78.18%), Query Frame = 1
BLAST of Spo21500.1 vs. UniProtKB/TrEMBL
Match: M0T754_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1) HSP 1 Score: 216.5 bits (550), Expect = 2.700e-53 Identity = 99/117 (84.62%), Postives = 111/117 (94.87%), Query Frame = 1
BLAST of Spo21500.1 vs. ExPASy Swiss-Prot
Match: GRS14_ARATH (Monothiol glutaredoxin-S14, chloroplastic OS=Arabidopsis thaliana GN=GRXS14 PE=1 SV=2) HSP 1 Score: 196.4 bits (498), Expect = 2.600e-49 Identity = 91/116 (78.45%), Postives = 105/116 (90.52%), Query Frame = 1
BLAST of Spo21500.1 vs. ExPASy Swiss-Prot
Match: GRXS7_ORYSJ (Monothiol glutaredoxin-S7, chloroplastic OS=Oryza sativa subsp. japonica GN=GRXS7 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 4.900e-48 Identity = 89/119 (74.79%), Postives = 106/119 (89.08%), Query Frame = 1
BLAST of Spo21500.1 vs. ExPASy Swiss-Prot
Match: YC64L_SYNY3 (Uncharacterized monothiol glutaredoxin ycf64-like OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1846 PE=3 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 2.200e-32 Identity = 61/107 (57.01%), Postives = 86/107 (80.37%), Query Frame = 1
BLAST of Spo21500.1 vs. ExPASy Swiss-Prot
Match: YCF64_PYRYE (Uncharacterized monothiol glutaredoxin ycf64 OS=Pyropia yezoensis GN=ycf64 PE=3 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 1.900e-28 Identity = 55/104 (52.88%), Postives = 76/104 (73.08%), Query Frame = 1
BLAST of Spo21500.1 vs. ExPASy Swiss-Prot
Match: YCF64_PORPU (Uncharacterized monothiol glutaredoxin ycf64 OS=Porphyra purpurea GN=ycf64 PE=3 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.600e-27 Identity = 54/104 (51.92%), Postives = 76/104 (73.08%), Query Frame = 1
BLAST of Spo21500.1 vs. TAIR (Arabidopsis)
Match: AT3G54900.1 (CAX interacting protein 1) HSP 1 Score: 196.4 bits (498), Expect = 1.500e-50 Identity = 91/116 (78.45%), Postives = 105/116 (90.52%), Query Frame = 1
BLAST of Spo21500.1 vs. TAIR (Arabidopsis)
Match: AT4G04950.1 (thioredoxin family protein) HSP 1 Score: 112.8 bits (281), Expect = 2.100e-25 Identity = 50/95 (52.63%), Postives = 71/95 (74.74%), Query Frame = 1
BLAST of Spo21500.1 vs. TAIR (Arabidopsis)
Match: AT2G38270.1 (CAX-interacting protein 2) HSP 1 Score: 108.2 bits (269), Expect = 5.200e-24 Identity = 48/96 (50.00%), Postives = 69/96 (71.88%), Query Frame = 1
BLAST of Spo21500.1 vs. TAIR (Arabidopsis)
Match: AT3G15660.1 (glutaredoxin 4) HSP 1 Score: 103.2 bits (256), Expect = 1.700e-22 Identity = 43/98 (43.88%), Postives = 67/98 (68.37%), Query Frame = 1
BLAST of Spo21500.1 vs. TAIR (Arabidopsis)
Match: AT5G63030.1 (Thioredoxin superfamily protein) HSP 1 Score: 53.5 bits (127), Expect = 1.500e-7 Identity = 30/107 (28.04%), Postives = 54/107 (50.47%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo21500.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo21500.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo21500.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo21500.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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