Spo24875 (gene)

Overview
NameSpo24875
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionPentatricopeptide repeat-containing protein
Locationchr3 : 52903215 .. 52904465 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCATTTTCTCGCTCCATTCGTCTTGTTCGTCAACTCTCCACCACCTCCGCCACCACCATTTCCTCCACCACCACCACCACCACCACCGCCACCACACCTTCAATTTCAATCTCCAAAGCAAAATTCAAGCTAAGAACAGAGCACGACCCTGACAAAGCCTTACAAATCTACTCCTCTGTTTCCGATCATTACACTTCCCCTTCCTCCTCTCGCTACGCCCAGGAACTCACCGTCCAACGCCTCGCAAAAGCTCGTCGCTTCACCGACATAGAAACCCTCATCGAAGCCCACAAGAACAACCCCAAGATCACTCAAGAGCCTTTTCTCTGTACTTTGATCCGATGTTATGGCAAAGCAGGTATGTATGATCACGCCTTAAACACTTTTAATCAAATGGAGGAACTGGGTACTCCAAGAACAGCTCTTTCTTTCAATGCATTGCTTTCTGCTTGTAATCATTCTAAGTTGTTTGATAATGTACCCCAACTGTTCGACGAAATGCCTAAGAGACATGGATTTGCCCCTGATAAGGTTTCTTATGGGATTTTGATCAAGAGTTTCTGTGAGAAGGGGGATCCTGAATTAGCCTTAAAAACATTGGAAGAAATGGAGAAGAACAGTATTGAGGTTACTGCTGTGACTTACACAACTATTTTTGATGCATTGTATAAGAAAGGGAAACATGATGAAGCTGAATGTGTTTGGAATGAAATGGTGAAGAAGGGTTGTCCAATTGATGTTGCAGCTTATAATGTTAGGATTGGTCATGCACATGGTGGTGAACCAGAAGGGGTTAAGAAGTTGATTGAGGACATGGCTGCTGTAGGTTTGACACCAGATACAATTAGTTATAATTATTTGTTAACTAGCTATTGTAGAAATGAGAGGATTGATGAAGCTATGAAGCTTTACCAAGAGTTAGAGGCAAGTGGATTTAAGCCGAAAGCTGCAACATTTAGGACTTTGGTTCATTATCTGTGTAAGAATGGGGATTTTGGGACTGGTTATGATGTGTTCAAGAGGAGTGTTTTTCATAACAAGATTCCTGATTTTGCAACTTTGAAGGTTTTAGTGGAAGGGTTAGTGGAGAAGAAGAATAGGAAGGATGCAAAGGGGTTGATTCGAACTGTTAAGAAGAAGTTCCCAAGTAATGTTCTGAATGCTTGGAAGAAACTTGAGGTAGAACTTGGTTTGGCTTCTGAAGGACCTTCTCCTGTTGTGCCTGAAGTGGAAGAGGTTGCAAAATAG

mRNA sequence

ATGTCATTTTCTCGCTCCATTCGTCTTGTTCGTCAACTCTCCACCACCTCCGCCACCACCATTTCCTCCACCACCACCACCACCACCACCGCCACCACACCTTCAATTTCAATCTCCAAAGCAAAATTCAAGCTAAGAACAGAGCACGACCCTGACAAAGCCTTACAAATCTACTCCTCTGTTTCCGATCATTACACTTCCCCTTCCTCCTCTCGCTACGCCCAGGAACTCACCGTCCAACGCCTCGCAAAAGCTCGTCGCTTCACCGACATAGAAACCCTCATCGAAGCCCACAAGAACAACCCCAAGATCACTCAAGAGCCTTTTCTCTGTACTTTGATCCGATGTTATGGCAAAGCAGGTATGTATGATCACGCCTTAAACACTTTTAATCAAATGGAGGAACTGGGTACTCCAAGAACAGCTCTTTCTTTCAATGCATTGCTTTCTGCTTGTAATCATTCTAAGTTGTTTGATAATGTACCCCAACTGTTCGACGAAATGCCTAAGAGACATGGATTTGCCCCTGATAAGGTTTCTTATGGGATTTTGATCAAGAGTTTCTGTGAGAAGGGGGATCCTGAATTAGCCTTAAAAACATTGGAAGAAATGGAGAAGAACAGTATTGAGGTTACTGCTGTGACTTACACAACTATTTTTGATGCATTGTATAAGAAAGGGAAACATGATGAAGCTGAATGTGTTTGGAATGAAATGGTGAAGAAGGGTTGTCCAATTGATGTTGCAGCTTATAATGTTAGGATTGGTCATGCACATGGTGGTGAACCAGAAGGGGTTAAGAAGTTGATTGAGGACATGGCTGCTGTAGGTTTGACACCAGATACAATTAGTTATAATTATTTGTTAACTAGCTATTGTAGAAATGAGAGGATTGATGAAGCTATGAAGCTTTACCAAGAGTTAGAGGCAAGTGGATTTAAGCCGAAAGCTGCAACATTTAGGACTTTGGTTCATTATCTGTGTAAGAATGGGGATTTTGGGACTGGTTATGATGTGTTCAAGAGGAGTGTTTTTCATAACAAGATTCCTGATTTTGCAACTTTGAAGGTTTTAGTGGAAGGGTTAGTGGAGAAGAAGAATAGGAAGGATGCAAAGGGGTTGATTCGAACTGTTAAGAAGAAGTTCCCAAGTAATGTTCTGAATGCTTGGAAGAAACTTGAGGTAGAACTTGGTTTGGCTTCTGAAGGACCTTCTCCTGTTGTGCCTGAAGTGGAAGAGGTTGCAAAATAG

Coding sequence (CDS)

ATGTCATTTTCTCGCTCCATTCGTCTTGTTCGTCAACTCTCCACCACCTCCGCCACCACCATTTCCTCCACCACCACCACCACCACCACCGCCACCACACCTTCAATTTCAATCTCCAAAGCAAAATTCAAGCTAAGAACAGAGCACGACCCTGACAAAGCCTTACAAATCTACTCCTCTGTTTCCGATCATTACACTTCCCCTTCCTCCTCTCGCTACGCCCAGGAACTCACCGTCCAACGCCTCGCAAAAGCTCGTCGCTTCACCGACATAGAAACCCTCATCGAAGCCCACAAGAACAACCCCAAGATCACTCAAGAGCCTTTTCTCTGTACTTTGATCCGATGTTATGGCAAAGCAGGTATGTATGATCACGCCTTAAACACTTTTAATCAAATGGAGGAACTGGGTACTCCAAGAACAGCTCTTTCTTTCAATGCATTGCTTTCTGCTTGTAATCATTCTAAGTTGTTTGATAATGTACCCCAACTGTTCGACGAAATGCCTAAGAGACATGGATTTGCCCCTGATAAGGTTTCTTATGGGATTTTGATCAAGAGTTTCTGTGAGAAGGGGGATCCTGAATTAGCCTTAAAAACATTGGAAGAAATGGAGAAGAACAGTATTGAGGTTACTGCTGTGACTTACACAACTATTTTTGATGCATTGTATAAGAAAGGGAAACATGATGAAGCTGAATGTGTTTGGAATGAAATGGTGAAGAAGGGTTGTCCAATTGATGTTGCAGCTTATAATGTTAGGATTGGTCATGCACATGGTGGTGAACCAGAAGGGGTTAAGAAGTTGATTGAGGACATGGCTGCTGTAGGTTTGACACCAGATACAATTAGTTATAATTATTTGTTAACTAGCTATTGTAGAAATGAGAGGATTGATGAAGCTATGAAGCTTTACCAAGAGTTAGAGGCAAGTGGATTTAAGCCGAAAGCTGCAACATTTAGGACTTTGGTTCATTATCTGTGTAAGAATGGGGATTTTGGGACTGGTTATGATGTGTTCAAGAGGAGTGTTTTTCATAACAAGATTCCTGATTTTGCAACTTTGAAGGTTTTAGTGGAAGGGTTAGTGGAGAAGAAGAATAGGAAGGATGCAAAGGGGTTGATTCGAACTGTTAAGAAGAAGTTCCCAAGTAATGTTCTGAATGCTTGGAAGAAACTTGAGGTAGAACTTGGTTTGGCTTCTGAAGGACCTTCTCCTGTTGTGCCTGAAGTGGAAGAGGTTGCAAAATAG

Protein sequence

MSFSRSIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYSSVSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKAGMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVSYGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMVKKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDEAMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVEGLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEEVAK
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24875.1Spo24875.1mRNA


Homology
BLAST of Spo24875.1 vs. NCBI nr
Match: gi|902159979|gb|KNA06377.1| (hypothetical protein SOVF_181600 [Spinacia oleracea])

HSP 1 Score: 816.6 bits (2108), Expect = 2.000e-233
Identity = 414/416 (99.52%), Postives = 414/416 (99.52%), Query Frame = 1

		  

Query: 1   MSFSRSIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYSS 60
           MSFSRSIRLVRQLSTTSATTISSTT TTTTATTPSISISKAKFKLRTEHDPDKALQIYSS
Sbjct: 1   MSFSRSIRLVRQLSTTSATTISSTT-TTTTATTPSISISKAKFKLRTEHDPDKALQIYSS 60

Query: 61  VSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKA 120
           VSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKA
Sbjct: 61  VSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKA 120

Query: 121 GMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVS 180
           GMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVS
Sbjct: 121 GMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVS 180

Query: 181 YGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMV 240
           YGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMV
Sbjct: 181 YGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMV 240

Query: 241 KKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDE 300
           KKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGL PDTISYNYLLTSYCRNERIDE
Sbjct: 241 KKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLRPDTISYNYLLTSYCRNERIDE 300

Query: 301 AMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVE 360
           AMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVE
Sbjct: 301 AMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVE 360

Query: 361 GLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEEVAK 417
           GLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEEVAK
Sbjct: 361 GLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEEVAK 415

BLAST of Spo24875.1 vs. NCBI nr
Match: gi|731339389|ref|XP_010680824.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 680.6 bits (1755), Expect = 1.700e-192
Identity = 341/416 (81.97%), Postives = 368/416 (88.46%), Query Frame = 1

		  

Query: 1   MSFSRSIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYSS 60
           MSFSRSIR VRQLST+S++               SISISKAKFKLRTEHDPDKAL IYSS
Sbjct: 1   MSFSRSIRFVRQLSTSSSS---------------SISISKAKFKLRTEHDPDKALHIYSS 60

Query: 61  VSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKA 120
           VSDHYTSP SSRYAQELTVQRLAKA RF DIE+LIE+HK +PKITQEPFLC+LIRCYGKA
Sbjct: 61  VSDHYTSPVSSRYAQELTVQRLAKAHRFNDIESLIESHKKSPKITQEPFLCSLIRCYGKA 120

Query: 121 GMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVS 180
           GM+DHALNT+NQMEELGTPR+ LSFNALL+ACNHS+LFDNVPQLFDEMPKR+GF PDKVS
Sbjct: 121 GMFDHALNTYNQMEELGTPRSTLSFNALLTACNHSRLFDNVPQLFDEMPKRYGFVPDKVS 180

Query: 181 YGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMV 240
           YGILIKSFCEKGDPELALKTLE ME   +EVTAV+YTT+ D+ YKKGK DEAE VWNEM+
Sbjct: 181 YGILIKSFCEKGDPELALKTLEAMEGKGVEVTAVSYTTVLDSFYKKGKCDEAEDVWNEML 240

Query: 241 KKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDE 300
           KKGC IDVAAYNVRIGHA GGEPE VK+LIEDM AVGL PDTISYNYLLTSYCR+ R+DE
Sbjct: 241 KKGCVIDVAAYNVRIGHAQGGEPEDVKRLIEDMGAVGLRPDTISYNYLLTSYCRSGRMDE 300

Query: 301 AMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVE 360
           AMKLYQELE+SGFKPKAATFRTL+HYLCKN DFGTGYDVFKRSVFHNKIPDFATLKVLVE
Sbjct: 301 AMKLYQELESSGFKPKAATFRTLIHYLCKNEDFGTGYDVFKRSVFHNKIPDFATLKVLVE 360

Query: 361 GLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEEVAK 417
           GLV K  RKDAKGLIRTVKKKFP NVLNAWKK+E+ELGL+SE  SP   EVEE A+
Sbjct: 361 GLVAKNERKDAKGLIRTVKKKFPPNVLNAWKKVELELGLSSEESSPGTLEVEEAAR 401

BLAST of Spo24875.1 vs. NCBI nr
Match: gi|225430810|ref|XP_002271426.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial [Vitis vinifera])

HSP 1 Score: 535.8 bits (1379), Expect = 6.700e-149
Identity = 266/412 (64.56%), Postives = 331/412 (80.34%), Query Frame = 1

		  

Query: 2   SFSRSIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYSSV 61
           S +R +R VR LST +A   S   T   +A++ SIS+S+AK  LR+E DPD+AL+IYSSV
Sbjct: 4   SLARHLRHVRHLSTAAAAAAS---TAAASASSSSISVSRAKSILRSEFDPDRALEIYSSV 63

Query: 62  SDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKAG 121
           S HYTSP +SRYAQ+LTV+RLAK+RRF DIETLIE+HKN+PKITQEP+L TLIR YG AG
Sbjct: 64  SKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSYGIAG 123

Query: 122 MYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVSY 181
           M+ HAL TFNQMEELGTPR+++SFNALLSACN SKLFD VP+ F+E+P+R+G  PDK+SY
Sbjct: 124 MFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGVLPDKISY 183

Query: 182 GILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMVK 241
           GIL+KS+CE G  + A+  L+EME+  +E+TAVT+TTI DALYK+G+ D AE VW+EM K
Sbjct: 184 GILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAK 243

Query: 242 KGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDEA 301
           KGC +DV AYNV+I  AHGG+PE VK LI++M+  GL PDTISYNYL+TSYC++  +DEA
Sbjct: 244 KGC-LDVGAYNVKIMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMVDEA 303

Query: 302 MKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVEG 361
            K+Y ELE +G  P AATFRTL++YLC++GDF TGY VFK+S F  KIPDF TL+ LVEG
Sbjct: 304 KKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEG 363

Query: 362 LVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEE 414
           LV+KK  K+AKGLIRTVKK FP+N LN W+KLE +LGLA    SP   +V+E
Sbjct: 364 LVQKKKTKEAKGLIRTVKKNFPANFLNVWRKLEEDLGLAGVDSSPAADDVQE 411

BLAST of Spo24875.1 vs. NCBI nr
Match: gi|147840633|emb|CAN68320.1| (hypothetical protein VITISV_032192 [Vitis vinifera])

HSP 1 Score: 534.6 bits (1376), Expect = 1.500e-148
Identity = 265/412 (64.32%), Postives = 333/412 (80.83%), Query Frame = 1

		  

Query: 2   SFSRSIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYSSV 61
           S +R +R VR LST +A   ++ +T   +A++ SIS+S+AK  LR+E DPD+AL+IYSSV
Sbjct: 4   SLARHLRHVRHLSTAAAAA-AAASTAAASASSSSISVSRAKSILRSEFDPDRALEIYSSV 63

Query: 62  SDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKAG 121
           S HYTSP +SRYAQ+LTV+RLAK+RRF DIETLIE+HKN+PKITQEP+L TLIR YG AG
Sbjct: 64  SKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSYGIAG 123

Query: 122 MYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVSY 181
           M+ HAL TFNQMEELGTPR+++SFNALLSACN SKLFD VP+ F+E+P+R+G  PDK+SY
Sbjct: 124 MFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGIXPDKISY 183

Query: 182 GILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMVK 241
           GIL+KS+CE G  + A+  L+EME+  +E+TAVT+TTI DALYK+G+ D AE VW+EM K
Sbjct: 184 GILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAK 243

Query: 242 KGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDEA 301
           KGC +DV AYNV+I  AHGG+PE VK LI++M+  GL PDTISYNYL+TSYC++  +DEA
Sbjct: 244 KGC-LDVGAYNVKIMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMMDEA 303

Query: 302 MKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVEG 361
            K+Y ELE +G  P AATFRTL++YLC++GDF TGY VFK+S F  KIPDF TL+ LVEG
Sbjct: 304 KKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEG 363

Query: 362 LVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEE 414
           LV+KK  K+AKGLIRTVKK FP+N LN W+KLE +LGLA    SP   +V+E
Sbjct: 364 LVQKKKTKEAKGLIRTVKKNFPANFLNVWRKLEEDLGLAGVDSSPAADDVQE 413

BLAST of Spo24875.1 vs. NCBI nr
Match: gi|659107543|ref|XP_008453729.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial [Cucumis melo])

HSP 1 Score: 530.4 bits (1365), Expect = 2.800e-147
Identity = 262/404 (64.85%), Postives = 329/404 (81.44%), Query Frame = 1

		  

Query: 1   MSFSRSIRL-VRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYS 60
           MSFS S R  +R+LST +AT  ++  T  T  T+ S+SISKAK KLR E+DPDKAL+IYS
Sbjct: 1   MSFSISTRHHIRRLST-AATAAAAAATNATETTSSSLSISKAKSKLRNEYDPDKALEIYS 60

Query: 61  SVSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGK 120
           SVS HYTSP +SRYAQE+T++RLAK+RRF DIE+LIE+HKN+PKITQEPFL TLIR YG+
Sbjct: 61  SVSSHYTSPVTSRYAQEITIRRLAKSRRFKDIESLIESHKNDPKITQEPFLSTLIRSYGR 120

Query: 121 AGMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKV 180
            GM++HA+ T+NQM +LGTPR+ALSFNALLSACNHSK FD VPQLFDEMPKR+ F+P+K+
Sbjct: 121 VGMFEHAMRTYNQMGDLGTPRSALSFNALLSACNHSKQFDKVPQLFDEMPKRYNFSPNKI 180

Query: 181 SYGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEM 240
           SYGIL+KS+C+ G PE AL+ L EME+N +EVTAVT+TTI +ALYKKG+  EAE +W++M
Sbjct: 181 SYGILVKSYCDAGSPEKALQILREMEENDVEVTAVTFTTIINALYKKGESAEAEKIWDKM 240

Query: 241 VKKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERID 300
           + KGC +DV AYNVR+ H HGG+PE V+ +IE+MA  GL PD ISYNYL+T YC+N  ID
Sbjct: 241 MSKGCELDVGAYNVRLMHEHGGKPERVQAIIEEMANSGLKPDAISYNYLMTCYCKNGMID 300

Query: 301 EAMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLV 360
           EA K+Y ++E +G    AATFRT +++LC+NG++  GY VFK SV  NKIPDF TLK LV
Sbjct: 301 EAKKVYNDMEINGCNKNAATFRTFIYHLCRNGEYEKGYKVFKESVKMNKIPDFNTLKYLV 360

Query: 361 EGLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEG 404
           EGLVEKK  ++AKGLIRTV+KKFP + L AW+++E  +GLAS G
Sbjct: 361 EGLVEKKMMREAKGLIRTVRKKFPPDTLKAWREVEEGVGLASAG 403

BLAST of Spo24875.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QGJ5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_181600 PE=4 SV=1)

HSP 1 Score: 816.6 bits (2108), Expect = 1.400e-233
Identity = 414/416 (99.52%), Postives = 414/416 (99.52%), Query Frame = 1

		  

Query: 1   MSFSRSIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYSS 60
           MSFSRSIRLVRQLSTTSATTISSTT TTTTATTPSISISKAKFKLRTEHDPDKALQIYSS
Sbjct: 1   MSFSRSIRLVRQLSTTSATTISSTT-TTTTATTPSISISKAKFKLRTEHDPDKALQIYSS 60

Query: 61  VSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKA 120
           VSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKA
Sbjct: 61  VSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKA 120

Query: 121 GMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVS 180
           GMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVS
Sbjct: 121 GMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVS 180

Query: 181 YGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMV 240
           YGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMV
Sbjct: 181 YGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMV 240

Query: 241 KKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDE 300
           KKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGL PDTISYNYLLTSYCRNERIDE
Sbjct: 241 KKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLRPDTISYNYLLTSYCRNERIDE 300

Query: 301 AMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVE 360
           AMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVE
Sbjct: 301 AMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVE 360

Query: 361 GLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEEVAK 417
           GLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEEVAK
Sbjct: 361 GLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEEVAK 415

BLAST of Spo24875.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CAP0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g137640 PE=4 SV=1)

HSP 1 Score: 680.6 bits (1755), Expect = 1.200e-192
Identity = 341/416 (81.97%), Postives = 368/416 (88.46%), Query Frame = 1

		  

Query: 1   MSFSRSIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYSS 60
           MSFSRSIR VRQLST+S++               SISISKAKFKLRTEHDPDKAL IYSS
Sbjct: 1   MSFSRSIRFVRQLSTSSSS---------------SISISKAKFKLRTEHDPDKALHIYSS 60

Query: 61  VSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKA 120
           VSDHYTSP SSRYAQELTVQRLAKA RF DIE+LIE+HK +PKITQEPFLC+LIRCYGKA
Sbjct: 61  VSDHYTSPVSSRYAQELTVQRLAKAHRFNDIESLIESHKKSPKITQEPFLCSLIRCYGKA 120

Query: 121 GMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVS 180
           GM+DHALNT+NQMEELGTPR+ LSFNALL+ACNHS+LFDNVPQLFDEMPKR+GF PDKVS
Sbjct: 121 GMFDHALNTYNQMEELGTPRSTLSFNALLTACNHSRLFDNVPQLFDEMPKRYGFVPDKVS 180

Query: 181 YGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMV 240
           YGILIKSFCEKGDPELALKTLE ME   +EVTAV+YTT+ D+ YKKGK DEAE VWNEM+
Sbjct: 181 YGILIKSFCEKGDPELALKTLEAMEGKGVEVTAVSYTTVLDSFYKKGKCDEAEDVWNEML 240

Query: 241 KKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDE 300
           KKGC IDVAAYNVRIGHA GGEPE VK+LIEDM AVGL PDTISYNYLLTSYCR+ R+DE
Sbjct: 241 KKGCVIDVAAYNVRIGHAQGGEPEDVKRLIEDMGAVGLRPDTISYNYLLTSYCRSGRMDE 300

Query: 301 AMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVE 360
           AMKLYQELE+SGFKPKAATFRTL+HYLCKN DFGTGYDVFKRSVFHNKIPDFATLKVLVE
Sbjct: 301 AMKLYQELESSGFKPKAATFRTLIHYLCKNEDFGTGYDVFKRSVFHNKIPDFATLKVLVE 360

Query: 361 GLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEEVAK 417
           GLV K  RKDAKGLIRTVKKKFP NVLNAWKK+E+ELGL+SE  SP   EVEE A+
Sbjct: 361 GLVAKNERKDAKGLIRTVKKKFPPNVLNAWKKVELELGLSSEESSPGTLEVEEAAR 401

BLAST of Spo24875.1 vs. UniProtKB/TrEMBL
Match: F6GWY1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_04s0023g01460 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 4.700e-149
Identity = 266/412 (64.56%), Postives = 331/412 (80.34%), Query Frame = 1

		  

Query: 2   SFSRSIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYSSV 61
           S +R +R VR LST +A   S   T   +A++ SIS+S+AK  LR+E DPD+AL+IYSSV
Sbjct: 4   SLARHLRHVRHLSTAAAAAAS---TAAASASSSSISVSRAKSILRSEFDPDRALEIYSSV 63

Query: 62  SDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKAG 121
           S HYTSP +SRYAQ+LTV+RLAK+RRF DIETLIE+HKN+PKITQEP+L TLIR YG AG
Sbjct: 64  SKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSYGIAG 123

Query: 122 MYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVSY 181
           M+ HAL TFNQMEELGTPR+++SFNALLSACN SKLFD VP+ F+E+P+R+G  PDK+SY
Sbjct: 124 MFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGVLPDKISY 183

Query: 182 GILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMVK 241
           GIL+KS+CE G  + A+  L+EME+  +E+TAVT+TTI DALYK+G+ D AE VW+EM K
Sbjct: 184 GILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAK 243

Query: 242 KGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDEA 301
           KGC +DV AYNV+I  AHGG+PE VK LI++M+  GL PDTISYNYL+TSYC++  +DEA
Sbjct: 244 KGC-LDVGAYNVKIMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMVDEA 303

Query: 302 MKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVEG 361
            K+Y ELE +G  P AATFRTL++YLC++GDF TGY VFK+S F  KIPDF TL+ LVEG
Sbjct: 304 KKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEG 363

Query: 362 LVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEE 414
           LV+KK  K+AKGLIRTVKK FP+N LN W+KLE +LGLA    SP   +V+E
Sbjct: 364 LVQKKKTKEAKGLIRTVKKNFPANFLNVWRKLEEDLGLAGVDSSPAADDVQE 411

BLAST of Spo24875.1 vs. UniProtKB/TrEMBL
Match: A5BUJ7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_032192 PE=4 SV=1)

HSP 1 Score: 534.6 bits (1376), Expect = 1.000e-148
Identity = 265/412 (64.32%), Postives = 333/412 (80.83%), Query Frame = 1

		  

Query: 2   SFSRSIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYSSV 61
           S +R +R VR LST +A   ++ +T   +A++ SIS+S+AK  LR+E DPD+AL+IYSSV
Sbjct: 4   SLARHLRHVRHLSTAAAAA-AAASTAAASASSSSISVSRAKSILRSEFDPDRALEIYSSV 63

Query: 62  SDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKAG 121
           S HYTSP +SRYAQ+LTV+RLAK+RRF DIETLIE+HKN+PKITQEP+L TLIR YG AG
Sbjct: 64  SKHYTSPLASRYAQDLTVKRLAKSRRFADIETLIESHKNDPKITQEPYLSTLIRSYGIAG 123

Query: 122 MYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVSY 181
           M+ HAL TFNQMEELGTPR+++SFNALLSACN SKLFD VP+ F+E+P+R+G  PDK+SY
Sbjct: 124 MFQHALRTFNQMEELGTPRSSISFNALLSACNQSKLFDQVPKFFEEIPRRYGIXPDKISY 183

Query: 182 GILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMVK 241
           GIL+KS+CE G  + A+  L+EME+  +E+TAVT+TTI DALYK+G+ D AE VW+EM K
Sbjct: 184 GILVKSYCESGLSDKAISMLKEMEEKGVEITAVTFTTILDALYKQGQSDRAEKVWHEMAK 243

Query: 242 KGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDEA 301
           KGC +DV AYNV+I  AHGG+PE VK LI++M+  GL PDTISYNYL+TSYC++  +DEA
Sbjct: 244 KGC-LDVGAYNVKIMFAHGGDPENVKALIDEMSNAGLKPDTISYNYLMTSYCKSGMMDEA 303

Query: 302 MKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVEG 361
            K+Y ELE +G  P AATFRTL++YLC++GDF TGY VFK+S F  KIPDF TL+ LVEG
Sbjct: 304 KKVYAELEETGCHPNAATFRTLIYYLCRSGDFETGYKVFKQSAFRRKIPDFGTLRHLVEG 363

Query: 362 LVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVVPEVEE 414
           LV+KK  K+AKGLIRTVKK FP+N LN W+KLE +LGLA    SP   +V+E
Sbjct: 364 LVQKKKTKEAKGLIRTVKKNFPANFLNVWRKLEEDLGLAGVDSSPAADDVQE 413

BLAST of Spo24875.1 vs. UniProtKB/TrEMBL
Match: A0A061DFV5_THECC (Tetratricopeptide repeat (TPR)-like superfamily protein OS=Theobroma cacao GN=TCM_000426 PE=4 SV=1)

HSP 1 Score: 517.3 bits (1331), Expect = 1.700e-143
Identity = 265/402 (65.92%), Postives = 325/402 (80.85%), Query Frame = 1

		  

Query: 1   MSFSRSIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYSS 60
           MS S  +R +R LSTT       TTT  T +++ SISIS+AK KLRTE+DPDKAL+IYSS
Sbjct: 1   MSSSIPLRHLRHLSTT-------TTTAATASSSISISISQAKNKLRTEYDPDKALEIYSS 60

Query: 61  VSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKA 120
           VS HY+SPSSSRYAQ+LTV+RLAK+RRF+DIE+LIE+HK +PKITQEPFL TLIR YG A
Sbjct: 61  VSKHYSSPSSSRYAQDLTVRRLAKSRRFSDIESLIESHKTDPKITQEPFLSTLIRSYGIA 120

Query: 121 GMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHG-FAPDKV 180
           GM DHA+ TF+QM++ GTPR+ +SFN+LLSA NHS+ FD VPQLF+E+PK++G  +PDKV
Sbjct: 121 GMLDHAIKTFDQMDQFGTPRSTISFNSLLSAGNHSRQFDKVPQLFEEIPKKYGSVSPDKV 180

Query: 181 SYGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEM 240
           SYGILIKS+CE G P+  ++ L EME+ S+EVTAVT+TTI +ALYKKGK +EAE +W++M
Sbjct: 181 SYGILIKSYCEAGHPDKGIEVLREMERKSVEVTAVTFTTILNALYKKGKTEEAEKLWSDM 240

Query: 241 VKKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERID 300
           +K GC +DVA+YNVRI +  GG+PE VK+LI++M+ +GL PDTISYNYL+T YC+N  +D
Sbjct: 241 MKNGCELDVASYNVRIMNLQGGDPEKVKELIDEMSTMGLKPDTISYNYLMTCYCKNGMLD 300

Query: 301 EAMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLV 360
           EA K+Y+ LE +G  P AATFRTLV YLC NG    GY VFK SV  +KIPDF TLK LV
Sbjct: 301 EAKKVYEGLEGNGCNPNAATFRTLVFYLCLNGLHEQGYKVFKESVRLHKIPDFNTLKHLV 360

Query: 361 EGLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLAS 402
           EGLV+ K  K+AKGLIRTVKKKFP N LNAWKKLE ELGL S
Sbjct: 361 EGLVKNKKIKEAKGLIRTVKKKFPPNFLNAWKKLEEELGLVS 395

BLAST of Spo24875.1 vs. ExPASy Swiss-Prot
Match: PP352_ARATH (Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana GN=At4g36680 PE=2 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 1.000e-133
Identity = 245/404 (60.64%), Postives = 312/404 (77.23%), Query Frame = 1

		  

Query: 1   MSFSR-SIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYS 60
           M+ SR S+RLVR+ ++ +A        TTT  ++  IS+SKAK  LR EHDPDKAL+IY+
Sbjct: 1   MASSRISLRLVRRFASAAADG------TTTAPSSGKISVSKAKSTLRKEHDPDKALKIYA 60

Query: 61  SVSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGK 120
           +VSDH  SP SSRYAQELTV+RLAK RRF+DIETLIE+HKN+PKI +EPF  TLIR YG+
Sbjct: 61  NVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQ 120

Query: 121 AGMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHG-FAPDK 180
           A M++HA+ TF QM++ GTPR+A+SFNALL+AC HSK FD VPQLFDE+P+R+    PDK
Sbjct: 121 ASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDK 180

Query: 181 VSYGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNE 240
           +SYGILIKS+C+ G PE A++ + +M+   +EVT + +TTI  +LYKKG+ + A+ +WNE
Sbjct: 181 ISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNE 240

Query: 241 MVKKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERI 300
           MVKKGC +D AAYNVRI  A    PE VK+LIE+M+++GL PDTISYNYL+T+YC    +
Sbjct: 241 MVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGML 300

Query: 301 DEAMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVL 360
           DEA K+Y+ LE +   P AATFRTL+ +LC +  +  GY +FK+SV+ +KIPDF TLK L
Sbjct: 301 DEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHL 360

Query: 361 VEGLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASE 403
           V GLVE K R DAKGLIRTVKKKFP + LNAWKKLE ELGL S+
Sbjct: 361 VVGLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGLYSK 398

BLAST of Spo24875.1 vs. ExPASy Swiss-Prot
Match: PP162_ARATH (Pentatricopeptide repeat-containing protein At2g18520, mitochondrial OS=Arabidopsis thaliana GN=At2g18520 PE=2 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.900e-120
Identity = 226/403 (56.08%), Postives = 291/403 (72.21%), Query Frame = 1

		  

Query: 7   IRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYSSVSDHYT 66
           +R +R+ ST  AT I S TT    A   +I++SKAK KLR   DPDKAL IY SVS++ T
Sbjct: 8   LRFLRRFST--ATGIDSQTT----AYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNST 67

Query: 67  SPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKAGMYDHA 126
           SP SSRYA ELTVQRLAK++RF+DIE LIE+HKNNPKI  E FL TLIR YG+A M+DHA
Sbjct: 68  SPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHA 127

Query: 127 LNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRH-GFAPDKVSYGILI 186
           +  F +M++LGTPRT +SFNALL+AC HS LF+ VPQLFDE P+R+    PDK+SYG+LI
Sbjct: 128 MKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLI 187

Query: 187 KSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMVKKGCP 246
           KS+C+ G PE A++ + +ME   +EVT + +TTI  +LYK G  DEAE +W EMV KGC 
Sbjct: 188 KSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCD 247

Query: 247 IDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDEAMKLY 306
           +D   YNVR+ +A    PE VK+L+E+M++VGL PDT+SYNYL+T+YC    + EA K+Y
Sbjct: 248 LDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVY 307

Query: 307 QELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVEGLVEK 366
           + LE    +P AATFRTL+ +LC NG +  G  VFK+S   +KIPDF T K L EGLV+ 
Sbjct: 308 EGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKN 367

Query: 367 KNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVV 409
              +DA+G+ R VKKKFP  ++  WKKLE +LGL S+G +  V
Sbjct: 368 NRMEDARGVARIVKKKFPPRLVTEWKKLEEKLGLYSKGNAAAV 400

BLAST of Spo24875.1 vs. ExPASy Swiss-Prot
Match: PPR87_ARATH (Pentatricopeptide repeat-containing protein At1g61870, mitochondrial OS=Arabidopsis thaliana GN=PPR336 PE=2 SV=2)

HSP 1 Score: 209.5 bits (532), Expect = 6.900e-53
Identity = 126/383 (32.90%), Postives = 203/383 (53.00%), Query Frame = 1

		  

Query: 22  SSTTTTTTTATTPSISISKAKFKL---RTEHDPDKALQIYSSVSDHYTSPSS--SRYAQE 81
           S++T  +  + TP  S  K+K  L   ++E DPD+ L+I  + S    +P     R A  
Sbjct: 28  SASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAAS---LTPDCRIDRIAFS 87

Query: 82  LTVQRLAKARRFTDIETLIEAH-KNNPKITQEPFLCTLIRCYGKAGMYDHALNTFNQMEE 141
             V+ LA+ + F+ +  L++   +N P +  E F    I  Y +A M DH+L  F  +E+
Sbjct: 88  AAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEK 147

Query: 142 LGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVSYGILIKSFCEKGDPE 201
               RT  S NALL AC  +K +    +++ EMPK +G  PD  +Y  +IK FCE G   
Sbjct: 148 FEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSAS 207

Query: 202 LALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMVKKGCPIDVAAYNVRI 261
            +   + EME+  I+  + ++  +    Y + K DE   V   M  +G  I V+ YN+RI
Sbjct: 208 SSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRI 267

Query: 262 -GHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDEAMKLYQELEASGFK 321
                  + +  K L++ M + G+ P+T++Y++L+  +C  +  +EA KL++ +   G K
Sbjct: 268 QSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCK 327

Query: 322 PKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVEGLVEKKNRKDAKGL 381
           P +  + TL++YLCK GDF T   + K S+  N +P F+ +K LV GL +    ++AK L
Sbjct: 328 PDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKEL 387

Query: 382 IRTVKKKFPSNVLNAWKKLEVEL 398
           I  VK+KF  NV   W ++E  L
Sbjct: 388 IGQVKEKFTRNV-ELWNEVEAAL 406

BLAST of Spo24875.1 vs. ExPASy Swiss-Prot
Match: PP226_ARATH (Pentatricopeptide repeat-containing protein At3g13160, mitochondrial OS=Arabidopsis thaliana GN=At3g13160 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.100e-50
Identity = 101/305 (33.11%), Postives = 170/305 (55.74%), Query Frame = 1

		  

Query: 76  ELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKAGMYDHALNTFNQMEE 135
           E TV+RLA A++F  +E ++E     P +++E F+  +I  YG+ GM+++A   F++M E
Sbjct: 75  ERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPE 134

Query: 136 LGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVSYGILIKSFCEKGDPE 195
               RTALSFNALL+AC +SK FD V  +F E+P +    PD  SY  LIK  C KG   
Sbjct: 135 RNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFT 194

Query: 196 LALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMVKKGCPIDVAAYNVR- 255
            A+  ++E+E   ++   +T+  +    Y KGK +E E +W  MV+K    D+ +YN R 
Sbjct: 195 EAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARL 254

Query: 256 IGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDEAMKLYQELEASGFK 315
           +G A   + E +  L + +    L PD  ++  ++  +    ++DEA+  Y+E+E +G +
Sbjct: 255 LGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCR 314

Query: 316 PKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVEGLVEKKNRKDAKGL 375
           P    F +L+  +CK GD  + Y++ K       + D A L+ +V+ LV+   + +A+ +
Sbjct: 315 PLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374

Query: 376 IRTVK 380
           +   K
Sbjct: 375 VELAK 379

BLAST of Spo24875.1 vs. ExPASy Swiss-Prot
Match: PPR33_ARATH (Pentatricopeptide repeat-containing protein At1g11630, mitochondrial OS=Arabidopsis thaliana GN=At1g11630 PE=2 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.100e-50
Identity = 128/401 (31.92%), Postives = 208/401 (51.87%), Query Frame = 1

		  

Query: 5   RSIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKL-RTEHDPDKALQIYSSVS- 64
           R+   + Q +T      SS++  T  + T     S+    L ++E++PD+ L+I  S S 
Sbjct: 8   RTSEFILQKATQFRLKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILEICRSTSL 67

Query: 65  --DHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAH-KNNPKITQEPFLCTLIRCYGK 124
             D++      R    + V  LA+ + F  +  L++   +N P    E F    I  YG+
Sbjct: 68  SPDYHVD----RIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGR 127

Query: 125 AGMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKV 184
           A M D ++ TF  +E+   PRT  S NALL AC  +K +    +++ EMPK +G  PD  
Sbjct: 128 ANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLE 187

Query: 185 SYGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEM 244
           +Y  +I+  CE G    +   + EME+  I+ TA ++  + D  YK+ K DE   V   M
Sbjct: 188 TYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM 247

Query: 245 VKKGCPIDVAAYNVRIG-HAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERI 304
            + G  + VA YN+ I       +    K LI+ + +  + P++++Y+ L+  +C  E +
Sbjct: 248 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENL 307

Query: 305 DEAMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVL 364
           DEAM L++ +  +G+KP +  + TL+H LCK GDF T   + + S+  N +P F+ +K L
Sbjct: 308 DEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWL 367

Query: 365 VEGLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGL 400
           V GL  +    +AK LI  VK+KF  NV + W ++E  L L
Sbjct: 368 VNGLASRSKVDEAKELIAVVKEKFTRNV-DLWNEVEAALPL 403

BLAST of Spo24875.1 vs. TAIR (Arabidopsis)
Match: AT4G36680.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 478.0 bits (1229), Expect = 5.800e-135
Identity = 245/404 (60.64%), Postives = 312/404 (77.23%), Query Frame = 1

		  

Query: 1   MSFSR-SIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYS 60
           M+ SR S+RLVR+ ++ +A        TTT  ++  IS+SKAK  LR EHDPDKAL+IY+
Sbjct: 1   MASSRISLRLVRRFASAAADG------TTTAPSSGKISVSKAKSTLRKEHDPDKALKIYA 60

Query: 61  SVSDHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGK 120
           +VSDH  SP SSRYAQELTV+RLAK RRF+DIETLIE+HKN+PKI +EPF  TLIR YG+
Sbjct: 61  NVSDHSASPVSSRYAQELTVRRLAKCRRFSDIETLIESHKNDPKIKEEPFYSTLIRSYGQ 120

Query: 121 AGMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHG-FAPDK 180
           A M++HA+ TF QM++ GTPR+A+SFNALL+AC HSK FD VPQLFDE+P+R+    PDK
Sbjct: 121 ASMFNHAMRTFEQMDQYGTPRSAVSFNALLNACLHSKNFDKVPQLFDEIPQRYNKIIPDK 180

Query: 181 VSYGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNE 240
           +SYGILIKS+C+ G PE A++ + +M+   +EVT + +TTI  +LYKKG+ + A+ +WNE
Sbjct: 181 ISYGILIKSYCDSGTPEKAIEIMRQMQGKGMEVTTIAFTTILSSLYKKGELEVADNLWNE 240

Query: 241 MVKKGCPIDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERI 300
           MVKKGC +D AAYNVRI  A    PE VK+LIE+M+++GL PDTISYNYL+T+YC    +
Sbjct: 241 MVKKGCELDNAAYNVRIMSAQKESPERVKELIEEMSSMGLKPDTISYNYLMTAYCERGML 300

Query: 301 DEAMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVL 360
           DEA K+Y+ LE +   P AATFRTL+ +LC +  +  GY +FK+SV+ +KIPDF TLK L
Sbjct: 301 DEAKKVYEGLEGNNCAPNAATFRTLIFHLCYSRLYEQGYAIFKKSVYMHKIPDFNTLKHL 360

Query: 361 VEGLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASE 403
           V GLVE K R DAKGLIRTVKKKFP + LNAWKKLE ELGL S+
Sbjct: 361 VVGLVENKKRDDAKGLIRTVKKKFPPSFLNAWKKLEEELGLYSK 398

BLAST of Spo24875.1 vs. TAIR (Arabidopsis)
Match: AT2G18520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 433.3 bits (1113), Expect = 1.700e-121
Identity = 226/403 (56.08%), Postives = 291/403 (72.21%), Query Frame = 1

		  

Query: 7   IRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKLRTEHDPDKALQIYSSVSDHYT 66
           +R +R+ ST  AT I S TT    A   +I++SKAK KLR   DPDKAL IY SVS++ T
Sbjct: 8   LRFLRRFST--ATGIDSQTT----AYPGAITMSKAKSKLRKVQDPDKALAIYKSVSNNST 67

Query: 67  SPSSSRYAQELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKAGMYDHA 126
           SP SSRYA ELTVQRLAK++RF+DIE LIE+HKNNPKI  E FL TLIR YG+A M+DHA
Sbjct: 68  SPLSSRYAMELTVQRLAKSQRFSDIEALIESHKNNPKIKTETFLSTLIRSYGRASMFDHA 127

Query: 127 LNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRH-GFAPDKVSYGILI 186
           +  F +M++LGTPRT +SFNALL+AC HS LF+ VPQLFDE P+R+    PDK+SYG+LI
Sbjct: 128 MKMFEEMDKLGTPRTVVSFNALLAACLHSDLFERVPQLFDEFPQRYNNITPDKISYGMLI 187

Query: 187 KSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMVKKGCP 246
           KS+C+ G PE A++ + +ME   +EVT + +TTI  +LYK G  DEAE +W EMV KGC 
Sbjct: 188 KSYCDSGKPEKAMEIMRDMEVKGVEVTIIAFTTILGSLYKNGLVDEAESLWIEMVNKGCD 247

Query: 247 IDVAAYNVRIGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDEAMKLY 306
           +D   YNVR+ +A    PE VK+L+E+M++VGL PDT+SYNYL+T+YC    + EA K+Y
Sbjct: 248 LDNTVYNVRLMNAAKESPERVKELMEEMSSVGLKPDTVSYNYLMTAYCVKGMMSEAKKVY 307

Query: 307 QELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVEGLVEK 366
           + LE    +P AATFRTL+ +LC NG +  G  VFK+S   +KIPDF T K L EGLV+ 
Sbjct: 308 EGLE----QPNAATFRTLIFHLCINGLYDQGLTVFKKSAIVHKIPDFKTCKHLTEGLVKN 367

Query: 367 KNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGLASEGPSPVV 409
              +DA+G+ R VKKKFP  ++  WKKLE +LGL S+G +  V
Sbjct: 368 NRMEDARGVARIVKKKFPPRLVTEWKKLEEKLGLYSKGNAAAV 400

BLAST of Spo24875.1 vs. TAIR (Arabidopsis)
Match: AT1G61870.1 (pentatricopeptide repeat 336)

HSP 1 Score: 209.5 bits (532), Expect = 3.900e-54
Identity = 126/383 (32.90%), Postives = 203/383 (53.00%), Query Frame = 1

		  

Query: 22  SSTTTTTTTATTPSISISKAKFKL---RTEHDPDKALQIYSSVSDHYTSPSS--SRYAQE 81
           S++T  +  + TP  S  K+K  L   ++E DPD+ L+I  + S    +P     R A  
Sbjct: 28  SASTILSPDSKTPLTSKEKSKAALSLLKSEKDPDRILEICRAAS---LTPDCRIDRIAFS 87

Query: 82  LTVQRLAKARRFTDIETLIEAH-KNNPKITQEPFLCTLIRCYGKAGMYDHALNTFNQMEE 141
             V+ LA+ + F+ +  L++   +N P +  E F    I  Y +A M DH+L  F  +E+
Sbjct: 88  AAVENLAEKKHFSAVSNLLDGFIENRPDLKSERFAAHAIVLYAQANMLDHSLRVFRDLEK 147

Query: 142 LGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVSYGILIKSFCEKGDPE 201
               RT  S NALL AC  +K +    +++ EMPK +G  PD  +Y  +IK FCE G   
Sbjct: 148 FEISRTVKSLNALLFACLVAKDYKEAKRVYIEMPKMYGIEPDLETYNRMIKVFCESGSAS 207

Query: 202 LALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMVKKGCPIDVAAYNVRI 261
            +   + EME+  I+  + ++  +    Y + K DE   V   M  +G  I V+ YN+RI
Sbjct: 208 SSYSIVAEMERKGIKPNSSSFGLMISGFYAEDKSDEVGKVLAMMKDRGVNIGVSTYNIRI 267

Query: 262 -GHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDEAMKLYQELEASGFK 321
                  + +  K L++ M + G+ P+T++Y++L+  +C  +  +EA KL++ +   G K
Sbjct: 268 QSLCKRKKSKEAKALLDGMLSAGMKPNTVTYSHLIHGFCNEDDFEEAKKLFKIMVNRGCK 327

Query: 322 PKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVEGLVEKKNRKDAKGL 381
           P +  + TL++YLCK GDF T   + K S+  N +P F+ +K LV GL +    ++AK L
Sbjct: 328 PDSECYFTLIYYLCKGGDFETALSLCKESMEKNWVPSFSIMKSLVNGLAKDSKVEEAKEL 387

Query: 382 IRTVKKKFPSNVLNAWKKLEVEL 398
           I  VK+KF  NV   W ++E  L
Sbjct: 388 IGQVKEKFTRNV-ELWNEVEAAL 406

BLAST of Spo24875.1 vs. TAIR (Arabidopsis)
Match: AT3G13160.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 202.2 bits (513), Expect = 6.200e-52
Identity = 101/305 (33.11%), Postives = 170/305 (55.74%), Query Frame = 1

		  

Query: 76  ELTVQRLAKARRFTDIETLIEAHKNNPKITQEPFLCTLIRCYGKAGMYDHALNTFNQMEE 135
           E TV+RLA A++F  +E ++E     P +++E F+  +I  YG+ GM+++A   F++M E
Sbjct: 75  ERTVRRLAAAKKFEWVEEILEEQNKYPNMSKEGFVARIINLYGRVGMFENAQKVFDEMPE 134

Query: 136 LGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKVSYGILIKSFCEKGDPE 195
               RTALSFNALL+AC +SK FD V  +F E+P +    PD  SY  LIK  C KG   
Sbjct: 135 RNCKRTALSFNALLNACVNSKKFDLVEGIFKELPGKLSIEPDVASYNTLIKGLCGKGSFT 194

Query: 196 LALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEMVKKGCPIDVAAYNVR- 255
            A+  ++E+E   ++   +T+  +    Y KGK +E E +W  MV+K    D+ +YN R 
Sbjct: 195 EAVALIDEIENKGLKPDHITFNILLHESYTKGKFEEGEQIWARMVEKNVKRDIRSYNARL 254

Query: 256 IGHAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERIDEAMKLYQELEASGFK 315
           +G A   + E +  L + +    L PD  ++  ++  +    ++DEA+  Y+E+E +G +
Sbjct: 255 LGLAMENKSEEMVSLFDKLKGNELKPDVFTFTAMIKGFVSEGKLDEAITWYKEIEKNGCR 314

Query: 316 PKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVLVEGLVEKKNRKDAKGL 375
           P    F +L+  +CK GD  + Y++ K       + D A L+ +V+ LV+   + +A+ +
Sbjct: 315 PLKFVFNSLLPAICKAGDLESAYELCKEIFAKRLLVDEAVLQEVVDALVKGSKQDEAEEI 374

Query: 376 IRTVK 380
           +   K
Sbjct: 375 VELAK 379

BLAST of Spo24875.1 vs. TAIR (Arabidopsis)
Match: AT1G11630.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 202.2 bits (513), Expect = 6.200e-52
Identity = 128/401 (31.92%), Postives = 208/401 (51.87%), Query Frame = 1

		  

Query: 5   RSIRLVRQLSTTSATTISSTTTTTTTATTPSISISKAKFKL-RTEHDPDKALQIYSSVS- 64
           R+   + Q +T      SS++  T  + T     S+    L ++E++PD+ L+I  S S 
Sbjct: 8   RTSEFILQKATQFRLKSSSSSIFTLKSLTSKQKKSRDTLSLLKSENNPDRILEICRSTSL 67

Query: 65  --DHYTSPSSSRYAQELTVQRLAKARRFTDIETLIEAH-KNNPKITQEPFLCTLIRCYGK 124
             D++      R    + V  LA+ + F  +  L++   +N P    E F    I  YG+
Sbjct: 68  SPDYHVD----RIIFSVAVVTLAREKHFVAVSQLLDGFIQNQPDPKSESFAVRAIILYGR 127

Query: 125 AGMYDHALNTFNQMEELGTPRTALSFNALLSACNHSKLFDNVPQLFDEMPKRHGFAPDKV 184
           A M D ++ TF  +E+   PRT  S NALL AC  +K +    +++ EMPK +G  PD  
Sbjct: 128 ANMLDRSIQTFRNLEQYEIPRTVKSLNALLFACLMAKDYKEANRVYLEMPKMYGIEPDLE 187

Query: 185 SYGILIKSFCEKGDPELALKTLEEMEKNSIEVTAVTYTTIFDALYKKGKHDEAECVWNEM 244
           +Y  +I+  CE G    +   + EME+  I+ TA ++  + D  YK+ K DE   V   M
Sbjct: 188 TYNRMIRVLCESGSTSSSYSIVAEMERKWIKPTAASFGLMIDGFYKEEKFDEVRKVMRMM 247

Query: 245 VKKGCPIDVAAYNVRIG-HAHGGEPEGVKKLIEDMAAVGLTPDTISYNYLLTSYCRNERI 304
            + G  + VA YN+ I       +    K LI+ + +  + P++++Y+ L+  +C  E +
Sbjct: 248 DEFGVHVGVATYNIMIQCLCKRKKSAEAKALIDGVMSCRMRPNSVTYSLLIHGFCSEENL 307

Query: 305 DEAMKLYQELEASGFKPKAATFRTLVHYLCKNGDFGTGYDVFKRSVFHNKIPDFATLKVL 364
           DEAM L++ +  +G+KP +  + TL+H LCK GDF T   + + S+  N +P F+ +K L
Sbjct: 308 DEAMNLFEVMVCNGYKPDSECYFTLIHCLCKGGDFETALILCRESMEKNWVPSFSVMKWL 367

Query: 365 VEGLVEKKNRKDAKGLIRTVKKKFPSNVLNAWKKLEVELGL 400
           V GL  +    +AK LI  VK+KF  NV + W ++E  L L
Sbjct: 368 VNGLASRSKVDEAKELIAVVKEKFTRNV-DLWNEVEAALPL 403

The following BLAST results are available for this feature:
BLAST of Spo24875.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902159979|gb|KNA06377.1|2.0e-23399.5hypothetical protein SOVF_1816... [more]
gi|731339389|ref|XP_010680824.1|1.7e-19281.9PREDICTED: pentatricopeptide r... [more]
gi|225430810|ref|XP_002271426.1|6.7e-14964.5PREDICTED: pentatricopeptide r... [more]
gi|147840633|emb|CAN68320.1|1.5e-14864.3hypothetical protein VITISV_03... [more]
gi|659107543|ref|XP_008453729.1|2.8e-14764.8PREDICTED: pentatricopeptide r... [more]
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BLAST of Spo24875.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QGJ5_SPIOL1.4e-23399.5Uncharacterized protein OS=Spi... [more]
A0A0J8CAP0_BETVU1.2e-19281.9Uncharacterized protein OS=Bet... [more]
F6GWY1_VITVI4.7e-14964.5Putative uncharacterized prote... [more]
A5BUJ7_VITVI1.0e-14864.3Putative uncharacterized prote... [more]
A0A061DFV5_THECC1.7e-14365.9Tetratricopeptide repeat (TPR)... [more]
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BLAST of Spo24875.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
PP352_ARATH1.0e-13360.6Pentatricopeptide repeat-conta... [more]
PP162_ARATH2.9e-12056.0Pentatricopeptide repeat-conta... [more]
PPR87_ARATH6.9e-5332.9Pentatricopeptide repeat-conta... [more]
PP226_ARATH1.1e-5033.1Pentatricopeptide repeat-conta... [more]
PPR33_ARATH1.1e-5031.9Pentatricopeptide repeat-conta... [more]
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BLAST of Spo24875.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT4G36680.15.8e-13560.6Tetratricopeptide repeat (TPR)... [more]
AT2G18520.11.7e-12156.0Tetratricopeptide repeat (TPR)... [more]
AT1G61870.13.9e-5432.9pentatricopeptide repeat 336[more]
AT3G13160.16.2e-5233.1Tetratricopeptide repeat (TPR)... [more]
AT1G11630.16.2e-5231.9Tetratricopeptide repeat (TPR)... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 144..171
score: 0.013coord: 112..137
score: 1.
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 176..225
score: 1.2E-12coord: 280..329
score: 1.7
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 111..138
score: 9.6E-7coord: 283..315
score: 1.4E-8coord: 144..177
score: 1.3E-4coord: 214..248
score: 5.5E-9coord: 179..212
score: 4.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 212..246
score: 11.422coord: 177..211
score: 11.224coord: 316..350
score: 7.892coord: 351..381
score: 5.59coord: 281..315
score: 13.493coord: 141..176
score: 7.914coord: 106..140
score: 8
IPR011990Tetratricopeptide-like helical domainGENE3D1.25.40.10coord: 49..242
score: 1.9E-10coord: 279..343
score: 1.9
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 44..397
score: 1.2E
NoneNo IPR availablePANTHERPTHR24015:SF506SUBFAMILY NOT NAMEDcoord: 44..397
score: 1.2E

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0009308 amine metabolic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0016573 histone acetylation
biological_process GO:0006396 RNA processing
biological_process GO:0009658 chloroplast organization
biological_process GO:0006364 rRNA processing
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0048598 embryonic morphogenesis
biological_process GO:0048481 plant ovule development
biological_process GO:0045037 protein import into chloroplast stroma
biological_process GO:0006412 translation
cellular_component GO:0009536 plastid
cellular_component GO:0000123 histone acetyltransferase complex
cellular_component GO:0005840 ribosome
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0010006 Toc complex
cellular_component GO:0031359 integral component of chloroplast outer membrane
cellular_component GO:0005739 mitochondrion
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0004402 histone acetyltransferase activity
molecular_function GO:0016491 oxidoreductase activity
molecular_function GO:0003723 RNA binding
molecular_function GO:0005507 copper ion binding
molecular_function GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function GO:0016779 nucleotidyltransferase activity
molecular_function GO:0048038 quinone binding
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0019843 rRNA binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0005515 protein binding
RNA-Seq Expression