Spo24558 (gene)

Overview
NameSpo24558
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBlue copper protein
Locationchr3 : 58434928 .. 58435917 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATTTAATTAACTGGATAAGCATCATATTAGTCAACAAAACCATGTTAACTTTCAAGTTGTAGCTGTCAATTATTGACTTGTTTCCTATATAATGTTGCATCATGGCCCCTTTGATTTAAGCTAAGCGTACATTCTCTATCTACTTGTTTTCAGCATCTTTAGTTTGAGAGATATCAGAGAGATATGGCATTGGCAGCAGCATTTCTTCTATTCCTCCTGGCCGCGCCGTCGGTCTTTGCCACCAATTACCCGGTTGTTTGGGATCTAACCACCAACTACTCGTCTTGGGCCACCAGACCGCTGATTGCTGGTGATACGCTTAGTAAGTCTTCTTTGCTTTGCTATGTGGCTTTAACCTTTACACATAACTGTACATTCCATGAATATCATGCATAAGTTGAAACACTATTAAAAAAAATTGCTTAATAATTGGTTGGGTGTTGACAAATACCAGCATTCAGCTACAGTAGCGGCAGTCACAATGTGGAAGTTGTAAACAAAAATGCCTACGATAGTTGTTCTTCTAGCAATGCCCTACAGACACACACTGGTGGAACAAACATTATTACCTTAGCCGAGGGTCCAACGTACTTCATCTGTGGCTTCCCTACCCACTGTACTAATGGCATGAAGCTACAAATAACTGCCAGAGCTTCAAGTTCCACACCTTCATCAACGAACACCACCGGCTCAACTCCTGCTGCGGGTAGCACCGGAGCCGCTGGACTTTCAAGCGTGACTCCTTTGATGTTTGGTTTTCCACTTGTTTTGTTTGCTTTAACGAGCTAGAGAAGAGGCAGTGCAGATGATATAAGGAGTTTGTTGTGGATTTAATTTCAAAAGAGATGTATATCGTATTTAACTAGTGTCGTTTTTAAAATTTCATCTCATTTTGTAATTCTTTGTTAGTATGCACTCTGTAATTTTTTATGATCTAATATGATGCATTCAGCTATTACTAGCTTTTGAATTATTTCATAACAATAGCAC

mRNA sequence

ATTTAATTAACTGGATAAGCATCATATTAGTCAACAAAACCATGTTAACTTTCAAGTTGTAGCTGTCAATTATTGACTTGTTTCCTATATAATGTTGCATCATGGCCCCTTTGATTTAAGCTAAGCGTACATTCTCTATCTACTTGTTTTCAGCATCTTTAGTTTGAGAGATATCAGAGAGATATGGCATTGGCAGCAGCATTTCTTCTATTCCTCCTGGCCGCGCCGTCGGTCTTTGCCACCAATTACCCGGTTGTTTGGGATCTAACCACCAACTACTCGTCTTGGGCCACCAGACCGCTGATTGCTGGTGATACGCTTACATTCAGCTACAGTAGCGGCAGTCACAATGTGGAAGTTGTAAACAAAAATGCCTACGATAGTTGTTCTTCTAGCAATGCCCTACAGACACACACTGGTGGAACAAACATTATTACCTTAGCCGAGGGTCCAACGTACTTCATCTGTGGCTTCCCTACCCACTGTACTAATGGCATGAAGCTACAAATAACTGCCAGAGCTTCAAGTTCCACACCTTCATCAACGAACACCACCGGCTCAACTCCTGCTGCGGGTAGCACCGGAGCCGCTGGACTTTCAAGCGTGACTCCTTTGATGTTTGGTTTTCCACTTGTTTTGTTTGCTTTAACGAGCTAGAGAAGAGGCAGTGCAGATGATATAAGGAGTTTGTTGTGGATTTAATTTCAAAAGAGATGTATATCGTATTTAACTAGTGTCGTTTTTAAAATTTCATCTCATTTTGTAATTCTTTGTTAGTATGCACTCTGTAATTTTTTATGATCTAATATGATGCATTCAGCTATTACTAGCTTTTGAATTATTTCATAACAATAGCAC

Coding sequence (CDS)

ATGGCATTGGCAGCAGCATTTCTTCTATTCCTCCTGGCCGCGCCGTCGGTCTTTGCCACCAATTACCCGGTTGTTTGGGATCTAACCACCAACTACTCGTCTTGGGCCACCAGACCGCTGATTGCTGGTGATACGCTTACATTCAGCTACAGTAGCGGCAGTCACAATGTGGAAGTTGTAAACAAAAATGCCTACGATAGTTGTTCTTCTAGCAATGCCCTACAGACACACACTGGTGGAACAAACATTATTACCTTAGCCGAGGGTCCAACGTACTTCATCTGTGGCTTCCCTACCCACTGTACTAATGGCATGAAGCTACAAATAACTGCCAGAGCTTCAAGTTCCACACCTTCATCAACGAACACCACCGGCTCAACTCCTGCTGCGGGTAGCACCGGAGCCGCTGGACTTTCAAGCGTGACTCCTTTGATGTTTGGTTTTCCACTTGTTTTGTTTGCTTTAACGAGCTAG

Protein sequence

MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVVNKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSSTNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo24558.1Spo24558.1mRNA


Homology
[Close]
BLAST of Spo24558.1 vs. NCBI nr
Match: gi|902217262|gb|KNA17649.1| (hypothetical protein SOVF_078030 [Spinacia oleracea])

HSP 1 Score: 299.7 bits (766), Expect = 3.000e-78
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1 

		  

Query: 1   MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV 60
           MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV
Sbjct: 1   MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV 60

Query: 61  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSS 120
           NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSS
Sbjct: 61  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSS 120

Query: 121 TNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS 158
           TNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS
Sbjct: 121 TNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS 157
[Close]
BLAST of Spo24558.1 vs. NCBI nr
Match: gi|731341567|ref|XP_010681961.1| (PREDICTED: uclacyanin-2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 149.8 bits (377), Expect = 3.900e-33
Identity = 87/157 (55.41%), Postives = 104/157 (66.24%), Query Frame = 1 

		  

Query: 1   MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV 60
           M    A L+ LLAAPSVFA  YPVVW+L  +YSSWA RPL A DTL F+YS+ +HN+ VV
Sbjct: 1   MKFVTAILVILLAAPSVFALEYPVVWNLGNDYSSWADRPLTANDTLLFTYSN-AHNLLVV 60

Query: 61  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSS---T 120
           N+  YD+C  SNA+ +HT G  +I L  GP YFICG   HCT GM+LQ+    S+S   T
Sbjct: 61  NRGDYDNCVPSNAITSHTDGRTVIPLTPGPMYFICGIGNHCTQGMRLQVNVSTSASGGTT 120

Query: 121 PSSTNTT--GSTPAAGSTGAAGLSSVTPLMFGFPLVL 153
           PSST  T   S+  AGS GA GLS  T +MFG PL L
Sbjct: 121 PSSTAGTPPSSSTPAGSNGATGLSMATHVMFGLPLAL 156
[Close]
BLAST of Spo24558.1 vs. NCBI nr
Match: gi|645253256|ref|XP_008232494.1| (PREDICTED: uclacyanin-2-like [Prunus mume])

HSP 1 Score: 102.8 bits (255), Expect = 5.500e-19
Identity = 61/135 (45.19%), Postives = 87/135 (64.44%), Query Frame = 1 

		  

Query: 1   MALAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWA-TRPLIAGDTLTFSYSSGSH 60
           MA+A A ++ LLAAP+V+   + V     W+   +Y +WA ++    GDTL F+Y + SH
Sbjct: 1   MAIATALVILLLAAPAVYGVQHTVGDTDGWESNVDYVTWAASKTFTVGDTLLFTYGA-SH 60

Query: 61  NVEVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARAS 120
           +V+ VN+  Y SCSSSNA+ TH+ G   I L++ GP YFIC  P HC +GMKL +T  A+
Sbjct: 61  SVDQVNQAGYSSCSSSNAIGTHSDGNTSIPLSQAGPVYFICPTPGHCASGMKLTVTVVAA 120

Query: 121 SSTPSSTNTTGSTPA 130
            S P+++ TT S PA
Sbjct: 121 GSPPTTSPTTPSPPA 134
[Close]
BLAST of Spo24558.1 vs. NCBI nr
Match: gi|694395807|ref|XP_009373210.1| (PREDICTED: uclacyanin-3 [Pyrus x bretschneideri])

HSP 1 Score: 102.4 bits (254), Expect = 7.100e-19
Identity = 78/176 (44.32%), Postives = 102/176 (57.95%), Query Frame = 1 

		  

Query: 1   MALAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWA-TRPLIAGDTLTFSYSSGSH 60
           MA+A A L+ LLAAP+V+   + V     W  + +Y SWA +     GDTL F+Y S SH
Sbjct: 1   MAIATALLILLLAAPTVYGVQHIVGDASGWSTSVDYDSWAASNSFTVGDTLVFNYGS-SH 60

Query: 61  NVEVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARAS 120
            V++VN+  Y SCSSSN+L+T+  G   ITL++ GP YFIC    HC NGMKL +   A+
Sbjct: 61  KVDIVNQADYASCSSSNSLKTYDDGATTITLSQPGPAYFICPSAGHCANGMKLSVNVVAA 120

Query: 121 -------SSTPSSTNTT-GSTPA-----AGSTGAAGLSSVTPLMFGFPLVLFALTS 158
                  S+TP ST TT GS P+         GAA  +S+   M GFPLVL  L +
Sbjct: 121 GTPSGTPSTTPPSTPTTPGSNPSPPPPPPPPKGAA--NSLDMNMLGFPLVLATLVA 173
[Close]
BLAST of Spo24558.1 vs. NCBI nr
Match: gi|697127476|ref|XP_009617784.1| (PREDICTED: uclacyanin-3-like [Nicotiana tomentosiformis])

HSP 1 Score: 100.5 bits (249), Expect = 2.700e-18
Identity = 64/137 (46.72%), Postives = 89/137 (64.96%), Query Frame = 1 

		  

Query: 4   AAAFLLFLL-AAPSVFATNYPVV----WDLTTNYSSWATRPLI-AGDTLTFSYSSGSHNV 63
           A A LLFLL A+P  FA N+ V     W  T +YS+WA       GDTL F+Y  GSH+V
Sbjct: 5   AVATLLFLLVASPVAFAANHVVGGSGGWSQTGDYSTWAAGETFNVGDTLEFNYG-GSHSV 64

Query: 64  EVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARASSS 123
           +V++K+ Y++C++ NAL++H+ G   I L++ GP YF C    HC +GMKL +  + SSS
Sbjct: 65  DVISKDDYENCNTGNALESHSDGKTTIKLSKAGPMYFTCSAFGHCQSGMKLAVDVKDSSS 124

Query: 124 TPSSTNTTGSTPAAGST 134
           TPS+ +TT STP+  ST
Sbjct: 125 TPSTPSTTPSTPSTPST 140
[Close]
BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RFB0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_078030 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 2.100e-78
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 1 

		  

Query: 1   MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV 60
           MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV
Sbjct: 1   MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV 60

Query: 61  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSS 120
           NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSS
Sbjct: 61  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSSTPSS 120

Query: 121 TNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS 158
           TNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS
Sbjct: 121 TNTTGSTPAAGSTGAAGLSSVTPLMFGFPLVLFALTS 157
[Close]
BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C2K0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g144730 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.700e-33
Identity = 87/157 (55.41%), Postives = 104/157 (66.24%), Query Frame = 1 

		  

Query: 1   MALAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWATRPLIAGDTLTFSYSSGSHNVEVV 60
           M    A L+ LLAAPSVFA  YPVVW+L  +YSSWA RPL A DTL F+YS+ +HN+ VV
Sbjct: 1   MKFVTAILVILLAAPSVFALEYPVVWNLGNDYSSWADRPLTANDTLLFTYSN-AHNLLVV 60

Query: 61  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSS---T 120
           N+  YD+C  SNA+ +HT G  +I L  GP YFICG   HCT GM+LQ+    S+S   T
Sbjct: 61  NRGDYDNCVPSNAITSHTDGRTVIPLTPGPMYFICGIGNHCTQGMRLQVNVSTSASGGTT 120

Query: 121 PSSTNTT--GSTPAAGSTGAAGLSSVTPLMFGFPLVL 153
           PSST  T   S+  AGS GA GLS  T +MFG PL L
Sbjct: 121 PSSTAGTPPSSSTPAGSNGATGLSMATHVMFGLPLAL 156
[Close]
BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
Match: M5X4F6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa016927mg PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 7.200e-18
Identity = 63/149 (42.28%), Postives = 93/149 (62.42%), Query Frame = 1 

		  

Query: 1   MALAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWA-TRPLIAGDTLTFSYSSGSH 60
           MA+A A ++ LLAAP+V+   + V     W+   +Y +WA ++    GDTL F+Y + SH
Sbjct: 1   MAIATALVILLLAAPAVYGVQHTVGDTAGWESNVDYVTWAASKTFTVGDTLLFTYGA-SH 60

Query: 61  NVEVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARAS 120
           +V+ VN+  Y SCSSSNA+ TH+ G   I L++ GP YFIC  P HC +GMK+ +T  A+
Sbjct: 61  SVDQVNQAGYSSCSSSNAIGTHSDGNTSIPLSQAGPVYFICPTPGHCASGMKVTVTVVAA 120

Query: 121 SSTPSSTNTTGSTPAAGSTGAAGLSSVTP 144
            S P+++ TT S P   ST +   S+ +P
Sbjct: 121 GSPPTTSPTTPSPPT--STPSPPTSTPSP 146
[Close]
BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
Match: A0A0B0MZW4_GOSAR (Blue copper OS=Gossypium arboreum GN=F383_32300 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.200e-17
Identity = 65/146 (44.52%), Postives = 85/146 (58.22%), Query Frame = 1 

		  

Query: 1   MALAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWAT-RPLIAGDTLTFSYSSGSH 60
           M LAAA L  LLAAP+ FA  Y V     W  T +Y SW   +    GDTL F+Y  GSH
Sbjct: 1   MGLAAALLFLLLAAPAAFAEQYTVGDSSGWTTTGDYQSWVQGKTFTVGDTLLFTYG-GSH 60

Query: 61  NVEVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARAS 120
           +VE V+K+ YD+C++ NA+++++ G  +ITL+  G  YFIC    HC  GMKL I   A+
Sbjct: 61  SVEEVSKSDYDNCNTGNAIKSYSDGNTVITLSNPGAMYFICPTIGHCAGGMKLAINVVAA 120

Query: 121 S-------STPSSTNTTGSTPAAGST 134
           S       STPS + T   TP +G T
Sbjct: 121 SGNSPSTPSTPSGSTTPSGTPPSGGT 145
[Close]
BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
Match: F4YAW2_GOSHI (Copper binding protein 3 OS=Gossypium hirsutum GN=BCP3 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.200e-17
Identity = 65/146 (44.52%), Postives = 85/146 (58.22%), Query Frame = 1 

		  

Query: 1   MALAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWAT-RPLIAGDTLTFSYSSGSH 60
           M LAAA L  LLAAP+ FA  Y V     W  T +Y SW   +    GDTL F+Y  GSH
Sbjct: 1   MGLAAALLFLLLAAPAAFAEQYTVGDSSGWTTTGDYQSWVQGKTFTVGDTLLFTYG-GSH 60

Query: 61  NVEVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARAS 120
           +VE V+K+ YD+C++ NA+++++ G  +ITL+  G  YFIC    HC  GMKL I   A+
Sbjct: 61  SVEEVSKSDYDNCNTGNAIKSYSDGNTVITLSNPGAMYFICPTIGHCAGGMKLAINVVAA 120

Query: 121 S-------STPSSTNTTGSTPAAGST 134
           S       STPS + T   TP +G T
Sbjct: 121 SGNSPSTPSTPSGSTTPSGTPPSGGT 145
[Close]
BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.400e-14
Identity = 62/155 (40.00%), Postives = 89/155 (57.42%), Query Frame = 1 

		  

Query: 2   ALAAAFLLFLL--AAPSVFATNYPVV----WDLTTNYSSWATRPLIA-GDTLTFSYSSGS 61
           AL   FLL ++  A PS+ AT Y V     W +  +YS+WA+    A GD+L F+Y +G+
Sbjct: 6   ALVLCFLLAIINMALPSL-ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGA 65

Query: 62  HNVEVVNKNAYDSCSSSNALQTH-TGGTNIITLAEGPTYFICGFPTHCTNGMKLQITARA 121
           H V+ V ++ Y SC+S N++ T  TG T I     G  YFICG P H T GMKL I  +A
Sbjct: 66  HTVDEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKA 125

Query: 122 SSSTPSSTNTTGS-----TPAAGSTGAAGLSSVTP 144
           SS + ++ + T S     +P++  T AA  ++ TP
Sbjct: 126 SSGSSAAPSATPSSSGKGSPSSDDTPAATTTTTTP 159
[Close]
BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
Match: BCB3_ARATH (Uclacyanin-3 OS=Arabidopsis thaliana GN=UCC3 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.800e-14
Identity = 60/137 (43.80%), Postives = 75/137 (54.74%), Query Frame = 1 

		  

Query: 3   LAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWAT-RPLIAGDTLTFSYSSGSHNV 62
           +AAA LLFL A P+VFA  + V     W    +Y+ W T +    GDTL F Y   SH+V
Sbjct: 5   VAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGL-SHSV 64

Query: 63  EVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQI---TARA 122
            VV+K  YD+C SS A Q    G   I L   G  +F+C    HC NGMKL +    A  
Sbjct: 65  SVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAP 124

Query: 123 SSSTPSSTNTTGSTPAA 131
           S STPSS  +T STP++
Sbjct: 125 SPSTPSSPPSTPSTPSS 140
[Close]
BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
Match: BCB1_ARATH (Blue copper protein OS=Arabidopsis thaliana GN=BCB PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 1.400e-11
Identity = 51/140 (36.43%), Postives = 73/140 (52.14%), Query Frame = 1 

		  

Query: 7   FLLFLLAAPSVFATNYPVVWDLTTN-------YSSWAT-RPLIAGDTLTFSYSSGSHNVE 66
           FL+ + AA  VFA +Y V  D           Y++WAT +    GD L F +++G H+V 
Sbjct: 10  FLVLVFAAVVVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVA 69

Query: 67  VVNKNAYDSCSSSNALQTHT-GGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSST 126
           VV++ A+++C     +   T     I+    GP YFIC    HC  G KL IT  A+ +T
Sbjct: 70  VVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGAT 129

Query: 127 PSSTNTTGSTPAAGSTGAAG 138
             +T   G+TPA GST + G
Sbjct: 130 GGATPGAGATPAPGSTPSTG 149
[Close]
BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
Match: BABL_ARATH (Basic blue protein OS=Arabidopsis thaliana GN=ARPN PE=2 SV=2)

HSP 1 Score: 68.6 bits (166), Expect = 7.200e-11
Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 1 

		  

Query: 6   AFLLFLLAAPSVFATNYPV----VWDLTTNYSSWAT-RPLIAGDTLTFSYSSGSHNVEVV 65
           A  + LL A  V A  Y V    +W  T N   W   +   AGD L F+Y+   HNV  V
Sbjct: 20  AVSVLLLQADYVQAATYTVGDSGIW--TFNAVGWPKGKHFRAGDVLVFNYNPRMHNVVKV 79

Query: 66  NKNAYDSCSSSNALQTHTGGTNIITLAEGPTYFICGFPTHCTNGMKLQITA 112
           +  +Y++C +    + +T G + ITL++G  +FIC FP HC + MK+ +TA
Sbjct: 80  DSGSYNNCKTPTGAKPYTSGKDRITLSKGQNFFICNFPNHCESDMKIAVTA 128
[Close]
BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
Match: BABL_LILLO (Chemocyanin OS=Lilium longiflorum PE=1 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.000e-9
Identity = 34/84 (40.48%), Postives = 44/84 (52.38%), Query Frame = 1 

		  

Query: 29  TTNYSSW-ATRPLIAGDTLTFSYSSGSHNVEVVNKNAYDSCSSSNALQTHTGGTNIITLA 88
           T   S W A +   AGD L F Y+   HNV  V    Y SC++S   +    G + ITL+
Sbjct: 42  TFGTSGWPAGKTFRAGDVLVFKYNPAVHNVVSVPAGGYKSCTASPGSRVFKSGDDRITLS 101

Query: 89  EGPTYFICGFPTHCTNGMKLQITA 112
            G  YFIC  P HC  G+K+ +TA
Sbjct: 102 RGTNYFICSVPGHCQGGLKIAVTA 125
[Close]
BLAST of Spo24558.1 vs. TAIR (Arabidopsis)
Match: AT1G72230.1 (Cupredoxin superfamily protein)

HSP 1 Score: 82.4 bits (202), Expect = 2.700e-16
Identity = 56/142 (39.44%), Postives = 77/142 (54.23%), Query Frame = 1 

		  

Query: 8   LLFLLAAPSVFATNYPVVWDLTTNYSSWAT-RPLIAGDTLTFSYSSGSHNVEVVNKNAYD 67
           + F + AP+  A+ +PV W L  +YSS AT +    GDT+ F+Y +G H V+ V+++ Y 
Sbjct: 14  IFFNVFAPASSAS-HPVEWSLGKDYSSLATGKSFAVGDTIVFNYGAG-HTVDEVSESDYK 73

Query: 68  SCSSSNALQTHTGGTNIITL-AEGPTYFICGFPTHCTNGMKLQITARASSSTPSSTNTTG 127
           SC+  NA+ + + GT  I L   GP YFICG P HCT GMKL +   A+SS         
Sbjct: 74  SCTLGNAISSDSSGTTSIALKTPGPHYFICGIPGHCTGGMKLSVIVPAASS--------- 133

Query: 128 STPAAGSTGAAGLSSVTPLMFG 148
                GSTG       TP+  G
Sbjct: 134 ----GGSTGDGTTDKNTPVQDG 140
[Close]
BLAST of Spo24558.1 vs. TAIR (Arabidopsis)
Match: AT3G60280.1 (uclacyanin 3)

HSP 1 Score: 80.5 bits (197), Expect = 1.000e-15
Identity = 60/137 (43.80%), Postives = 75/137 (54.74%), Query Frame = 1 

		  

Query: 3   LAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWAT-RPLIAGDTLTFSYSSGSHNV 62
           +AAA LLFL A P+VFA  + V     W    +Y+ W T +    GDTL F Y   SH+V
Sbjct: 5   VAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGL-SHSV 64

Query: 63  EVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQI---TARA 122
            VV+K  YD+C SS A Q    G   I L   G  +F+C    HC NGMKL +    A  
Sbjct: 65  SVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAP 124

Query: 123 SSSTPSSTNTTGSTPAA 131
           S STPSS  +T STP++
Sbjct: 125 SPSTPSSPPSTPSTPSS 140
[Close]
BLAST of Spo24558.1 vs. TAIR (Arabidopsis)
Match: AT1G22480.1 (Cupredoxin superfamily protein)

HSP 1 Score: 77.8 bits (190), Expect = 6.600e-15
Identity = 52/134 (38.81%), Postives = 74/134 (55.22%), Query Frame = 1 

		  

Query: 3   LAAAFLLFLLAAPSVFATNYPVVWDLTTNYSSWAT-RPLIAGDTLTFSYSSGSHNVEVVN 62
           L    L+F + A +  A+   V W L T+Y+   T +    GDT+ F+Y +G H V+ V+
Sbjct: 5   LGCLVLIFSMVAQASSAS-LTVNWSLGTDYTPLTTGKTFSVGDTIVFNYGAG-HTVDEVS 64

Query: 63  KNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKLQITARASSSTPSS 122
           +N Y SC+  N++ + + GT  I L   GP YFICG P HC  GMKL +T  ++SS   +
Sbjct: 65  ENDYKSCTLGNSITSDSSGTTTIALTTTGPRYFICGIPGHCAAGMKLAVTVASNSSNGVA 124

Query: 123 TNTTGSTPAAGSTG 135
             TT  TP  G  G
Sbjct: 125 GGTTTPTPFTGGGG 136
[Close]
BLAST of Spo24558.1 vs. TAIR (Arabidopsis)
Match: AT3G60270.1 (Cupredoxin superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 4.800e-13
Identity = 54/139 (38.85%), Postives = 72/139 (51.80%), Query Frame = 1 

		  

Query: 2   ALAAAFLLFLLAAPSVFATNYPVV----WDLTTNYSSWATRPLI-AGDTLTFSYSSGSHN 61
           A A   LL L+A P+VFA  + V     W +   Y+SW +      GDTL F Y   SH+
Sbjct: 6   ATALLLLLLLVAVPAVFAVTFQVGDNDGWTIGVEYTSWVSEKTFRVGDTLEFKYGP-SHS 65

Query: 62  VEVVNKNAYDSCSSSNALQTHTGGTNIITLAE-GPTYFICGFPTHCTNGMKL--QITARA 121
           V VVNK  YD C +S   Q+ + G   I L + G  +F+C  P HC+ GMKL  Q+ A  
Sbjct: 66  VAVVNKADYDGCETSRPTQSFSDGDTKIDLTKVGAIHFLCLTPGHCSLGMKLAVQVLAAV 125

Query: 122 SSSTPSSTNTTGSTPAAGS 133
           S   P S +    +P+A S
Sbjct: 126 SLEPPPSPSAPSPSPSAPS 143
[Close]
BLAST of Spo24558.1 vs. TAIR (Arabidopsis)
Match: AT5G20230.1 (blue-copper-binding protein)

HSP 1 Score: 70.9 bits (172), Expect = 8.100e-13
Identity = 51/140 (36.43%), Postives = 73/140 (52.14%), Query Frame = 1 

		  

Query: 7   FLLFLLAAPSVFATNYPVVWDLTTN-------YSSWAT-RPLIAGDTLTFSYSSGSHNVE 66
           FL+ + AA  VFA +Y V  D           Y++WAT +    GD L F +++G H+V 
Sbjct: 10  FLVLVFAAVVVFAEDYDVGDDTEWTRPMDPEFYTTWATGKTFRVGDELEFDFAAGRHDVA 69

Query: 67  VVNKNAYDSCSSSNALQTHT-GGTNIITLAEGPTYFICGFPTHCTNGMKLQITARASSST 126
           VV++ A+++C     +   T     I+    GP YFIC    HC  G KL IT  A+ +T
Sbjct: 70  VVSEAAFENCEKEKPISHMTVPPVKIMLNTTGPQYFICTVGDHCRFGQKLSITVVAAGAT 129

Query: 127 PSSTNTTGSTPAAGSTGAAG 138
             +T   G+TPA GST + G
Sbjct: 130 GGATPGAGATPAPGSTPSTG 149
The following BLAST results are available for this feature:
BLAST of Spo24558.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902217262|gb|KNA17649.1|3.0e-78100.hypothetical protein SOVF_0780... [more]
gi|731341567|ref|XP_010681961.1|3.9e-3355.4PREDICTED: uclacyanin-2-like [... [more]
gi|645253256|ref|XP_008232494.1|5.5e-1945.1PREDICTED: uclacyanin-2-like [... [more]
gi|694395807|ref|XP_009373210.1|7.1e-1944.3PREDICTED: uclacyanin-3 [Pyrus... [more]
gi|697127476|ref|XP_009617784.1|2.7e-1846.7PREDICTED: uclacyanin-3-like [... [more]
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BLAST of Spo24558.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RFB0_SPIOL2.1e-78100.Uncharacterized protein OS=Spi... [more]
A0A0J8C2K0_BETVU2.7e-3355.4Uncharacterized protein OS=Bet... [more]
M5X4F6_PRUPE7.2e-1842.2Uncharacterized protein OS=Pru... [more]
A0A0B0MZW4_GOSAR1.2e-1744.5Blue copper OS=Gossypium arbor... [more]
F4YAW2_GOSHI1.2e-1744.5Copper binding protein 3 OS=Go... [more]
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BLAST of Spo24558.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
BCP_PEA1.4e-1440.0Blue copper protein OS=Pisum s... [more]
BCB3_ARATH1.8e-1443.8Uclacyanin-3 OS=Arabidopsis th... [more]
BCB1_ARATH1.4e-1136.4Blue copper protein OS=Arabido... [more]
BABL_ARATH7.2e-1136.9Basic blue protein OS=Arabidop... [more]
BABL_LILLO1.0e-940.4Chemocyanin OS=Lilium longiflo... [more]
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BLAST of Spo24558.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT1G72230.12.7e-1639.4Cupredoxin superfamily protein[more]
AT3G60280.11.0e-1543.8uclacyanin 3[more]
AT1G22480.16.6e-1538.8Cupredoxin superfamily protein[more]
AT3G60270.14.8e-1338.8Cupredoxin superfamily protein[more]
AT5G20230.18.1e-1336.4blue-copper-binding protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003245Phytocyanin domainPRODOMPD003122coord: 48..109
score: 7.0
IPR003245Phytocyanin domainPFAMPF02298Cu_bind_likecoord: 27..105
score: 5.0
IPR003245Phytocyanin domainPROFILEPS51485PHYTOCYANINcoord: 20..113
score: 26
IPR008972CupredoxinGENE3D2.60.40.420coord: 26..117
score: 1.4
IPR008972CupredoxinunknownSSF49503Cupredoxinscoord: 26..111
score: 1.37
NoneNo IPR availablePANTHERPTHR33021FAMILY NOT NAMEDcoord: 1..143
score: 3.9

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015748 organophosphate ester transport
biological_process GO:0033358 UDP-L-arabinose biosynthetic process
biological_process GO:0010214 seed coat development
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0045489 pectin biosynthetic process
biological_process GO:0009620 response to fungus
biological_process GO:0009753 response to jasmonic acid
biological_process GO:0009611 response to wounding
biological_process GO:0005982 starch metabolic process
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0008219 cell death
biological_process GO:0008152 metabolic process
biological_process GO:0015716 organic phosphonate transport
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0016310 phosphorylation
biological_process GO:0006073 cellular glucan metabolic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0009987 cellular process
biological_process GO:0006979 response to oxidative stress
biological_process GO:0006012 galactose metabolic process
biological_process GO:0071555 cell wall organization
biological_process GO:0045227 capsule polysaccharide biosynthetic process
biological_process GO:0046685 response to arsenic-containing substance
biological_process GO:0042128 nitrate assimilation
biological_process GO:0006633 fatty acid biosynthetic process
biological_process GO:0005992 trehalose biosynthetic process
biological_process GO:0016311 dephosphorylation
biological_process GO:0006508 proteolysis
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0009738 abscisic acid-activated signaling pathway
biological_process GO:0016114 terpenoid biosynthetic process
biological_process GO:0045727 positive regulation of translation
biological_process GO:0006468 protein phosphorylation
biological_process GO:0051726 regulation of cell cycle
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006694 steroid biosynthetic process
biological_process GO:1900994 (-)-secologanin biosynthetic process
biological_process GO:0006810 transport
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0006027 glycosaminoglycan catabolic process
biological_process GO:0009308 amine metabolic process
biological_process GO:0031347 regulation of defense response
biological_process GO:0009853 photorespiration
biological_process GO:0000165 MAPK cascade
biological_process GO:0006687 glycosphingolipid metabolic process
biological_process GO:0044242 cellular lipid catabolic process
biological_process GO:0042744 hydrogen peroxide catabolic process
biological_process GO:0015947 methane metabolic process
biological_process GO:0009648 photoperiodism
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006013 mannose metabolic process
biological_process GO:0006000 fructose metabolic process
cellular_component GO:0005618 cell wall
cellular_component GO:0010319 stromule
cellular_component GO:0048046 apoplast
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005773 vacuole
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0005777 peroxisome
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0044424 intracellular part
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005622 intracellular
cellular_component GO:0005829 cytosol
cellular_component GO:0031966 mitochondrial membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009341 beta-galactosidase complex
cellular_component GO:0022626 cytosolic ribosome
cellular_component GO:0009514 glyoxysome
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0031012 extracellular matrix
cellular_component GO:0016020 membrane
molecular_function GO:0004672 protein kinase activity
molecular_function GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
molecular_function GO:0016887 ATPase activity
molecular_function GO:0004805 trehalose-phosphatase activity
molecular_function GO:0003825 alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity
molecular_function GO:0016762 xyloglucan:xyloglucosyl transferase activity
molecular_function GO:0004565 beta-galactosidase activity
molecular_function GO:0004096 catalase activity
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0035251 UDP-glucosyltransferase activity
molecular_function GO:0050660 flavin adenine dinucleotide binding
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0046556 alpha-L-arabinofuranosidase activity
molecular_function GO:0008422 beta-glucosidase activity
molecular_function GO:0003978 UDP-glucose 4-epimerase activity
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0038023 signaling receptor activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0004693 cyclin-dependent protein serine/threonine kinase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005215 transporter activity
molecular_function GO:0003939 L-iditol 2-dehydrogenase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005057 obsolete signal transducer activity, downstream of receptor
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity
molecular_function GO:0050373 UDP-arabinose 4-epimerase activity
molecular_function GO:0015416 ATPase-coupled organic phosphonate transmembrane transporter activity
molecular_function GO:0016301 kinase activity
molecular_function GO:0016773 phosphotransferase activity, alcohol group as acceptor
molecular_function GO:0020037 heme binding
molecular_function GO:0004601 peroxidase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0008131 primary amine oxidase activity
molecular_function GO:0048038 quinone binding
molecular_function GO:0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor
molecular_function GO:0050662 coenzyme binding
molecular_function GO:0004506 squalene monooxygenase activity
RNA-Seq Expression