Spo02452 (gene)

Overview
NameSpo02452
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionProbable gamma-secretase subunit PEN-2
Locationchr3 : 64786210 .. 64789185 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTCACAAATACTCGCAACTTTGGTATTGGAAAAAAGAAAAAAAAAATGGAGAGATCAGGGGAAGAGGGTTCTTCTTCATCATCACCTTCAACCTCAACCCTTCTCCCTCTACAAAATCCCAATATCTCCGCTAACACATCGGCAATTAGGAGACCTCGTTGGCCGACGATCGACGGACCACTTGGACTTTCAGAGGAAGACTCGGTTACATATGCTCGCCGCTTTTACAAGTTTGGATTTTTGCTTCTTCCTTGGCTTTGGGCTGTCAATTGCTTCTACTTTTGGCCTGTCCTTCGTCACTCTCACTCCTTCCCTTCAATCCGACGCTGTATGTATTCCATTTTTCTCTCTCTCCTCGATTTTTCCCATTTCCCCTGGAATTTCCTGAATTGGGTGTGTTTAAGTTTGATGGATTTTTCCATTTATGATTGAGAAATTAGGTGCCCTTTTCAAAATTTGATGATTTTATGAACTGGGTTTGCTTTTGGTTTCAGCTTTGTGCAGTGAATTGTTTCATTTTGGTTAAGAGTTCTTGGAACTCATTTTAGGTCCGAAGATAATACGATTTGGTATGCTTTTCATTTTAGCTTTGTGTAGTGATTTGTTGTTCCATTTACGATTATGGATTTTAGGTACCCATTTCAGTTCTGAAGATTGTATGAGCTGGTTTTGCTTTTGATTTTGTAGTGGAATATCTCCTTCACCCTCTTTCTCCTAGTTTCAAATGGTTCTTGAACGGTGGCATGAATTAGTCATTGTAACTGAGGATTAAGCATTACCCTTGCTTATTGGGATGGTTTTGTCACTTTATGGATTGGGTTCCCTTTAGTTTAAAGCTTTGTTTGGATATGTATGTTCTCTTCAAGGATTAAGTATATCAGTTCTAATTTGGATGTCATTTTCACTTTAGTTTTCAGACCTGTGTTTCTCTTGGGTTATGCTTATGTCATCTGAGACAGTTGAAGTGATGTGTACTAGGGTCGATAAGCTGTGAAATCTTTGTGTTTGTGGTTTATGATACTGTGATATTGTGGCTAAATATGAGAGCATGTCTAAACCATCCCTTGCCTTTTCTAGTTGAAGGGCATGAAAGTATGCGGTATGCCGCTGCCAACATTGATGTAACTTATAAGTGTAAGCCAGCCTAGGTTGCTTGAGAAGCTTGGCATGGTTACAACTGAGAATTTGTGTATAGCTGAGCTCGTGTGTTGTTGGGTTTGTAGCATTGAAGGGATTCAAACAATTTTATTCAAGGGACCTGAGAGCTGAGGTTTGTTGTGGGAAGGTGAGAGTTGAGGCAGCAATGTCCTGTTGACCTGTTCCAACCTGGTAATAATAATGGTGACTGGGCTGTTATTTAGACTCTTTTCAGCCATTATGCTTGTTCATCAGTTGGTTTCAGTGTATAGAGATGTCGATTTCAAATTTGACCTAGCAGATAACTAGATAGGTAGCTTTTGCTGTTACTTCCAGCGCATAGTCTTCGTTGCTGTTTTCATGGATCAAGACATATTGTGATAGCTTTTTCAAATTTGACCTAGAAGATAACTAGATTGGTAGCTTTTTCTGTTACTTTTAGCGCGTAGTCTTTGTAGCTCATTTTGTGGTCAAGCAATCTAAAGATATCATATTGATGGAGATTGGAGCGTTGTGTATATCGTAGTTGTTGAGAGGAAACTGAAATCAGGATTTTGTTGCTGTATGGGCTTAAGGCTGGCACTAGATGATAAAGTATGGTTACATAGTGATTGGATTAGAAGACATTTTTGGTGCAAGTACGTATTGTAGCATGAAAGAGGGAGTTGAGTTTGATGAGCAGTTGTCTTCTAGGTTTTCAATGTATCGCGATAGGGATTTGGTATCAGGCAGACCAGCGTGTTCCAGCTTTATTTCAACAAGTTATTGTATTCCAGCAATAGACTCGTGTAGTTCTCCCTATGAAATTTCTTTTTCCCTTGTTATGTTTGTCATGCATCCGGTCACTGATTTCCTTTGAATGTGCATGCTTTGTTCTTATGGTGAGCCAAATGTTGTCGTGAACTAGATTCTAGAACGCATCCAACAAATCATCTGCTAATTATTTAGGGTACTAACATTATAGAGATCTAGTCGCATACCATATTTGTTCTTCTAGGACCCAGAAGTTGTTGGGTTTAGGATATACACAACAATATCCAGAGGTCCCAAATTGTAACAAGGGGAAGACACCAGGTGACAGGGAGGGTTGTAATTTCTGACAATTAAATACAGCTTCAATAAAACGAATCTTGCAGTTGGATTTTTGATCCTCTAGAGTTCTAAAATAACTCTACAAGGTAGAGTTTGAGCATATCAACCATTGAATGAAAAATCAATGGTTCATATATTATCTTTCCAAAATTCTCTCTATTTTTTCTCATCAATATGAGCCATTGATTTTAAAATGTATGGTTTAGATACAACTCTACCTTGTAGAGTTTTATTAAAATTCTAGAGGATCCGGACTCGCCCAAATGCCCAGCTTCAAAGCATCATATTTGCCTCTCAGTGATGCTGACTTTTGCAGTATCACTATCCATGATAAGTAAACTTTATTCCTACTCATTCAATCACTTATTTTCTAGAAACGACATAATTGATCTTCTTCACGCTTCCTGTGGGGTGAAGAATAACAAAGCTCTGCCCTGTAATCTTTTATGAATTGTCTCTTTTCTATTTAAGAATTAACGCTAACTATTGGTCTTTCAAAACAGCCTTCTATATTCCCGAGTAAACAATGTTGCTTTTTTTTCTCCAGCCTCATTTGCATAATGTAACAATTCTCTTTCCTGCAGATGTTGTTGGATCAGCTATAGGGTGCTCTATTGCCACTATCCTGCTGTCTTCATGGGCATTAACATTTTCTATTGGAGGGGAGCGCTTTTTTGGCCCGGTTTGGAACAAGCTTGTTATGTACAATGTTGCTGATCAGTTAGGTCTAACAGGTTGGATGTAG

mRNA sequence

ACTTCACAAATACTCGCAACTTTGGTATTGGAAAAAAGAAAAAAAAAATGGAGAGATCAGGGGAAGAGGGTTCTTCTTCATCATCACCTTCAACCTCAACCCTTCTCCCTCTACAAAATCCCAATATCTCCGCTAACACATCGGCAATTAGGAGACCTCGTTGGCCGACGATCGACGGACCACTTGGACTTTCAGAGGAAGACTCGGTTACATATGCTCGCCGCTTTTACAAGTTTGGATTTTTGCTTCTTCCTTGGCTTTGGGCTGTCAATTGCTTCTACTTTTGGCCTGTCCTTCGTCACTCTCACTCCTTCCCTTCAATCCGACGCTATGTTGTTGGATCAGCTATAGGGTGCTCTATTGCCACTATCCTGCTGTCTTCATGGGCATTAACATTTTCTATTGGAGGGGAGCGCTTTTTTGGCCCGGTTTGGAACAAGCTTGTTATGTACAATGTTGCTGATCAGTTAGGTCTAACAGGTTGGATGTAG

Coding sequence (CDS)

ATGGAGAGATCAGGGGAAGAGGGTTCTTCTTCATCATCACCTTCAACCTCAACCCTTCTCCCTCTACAAAATCCCAATATCTCCGCTAACACATCGGCAATTAGGAGACCTCGTTGGCCGACGATCGACGGACCACTTGGACTTTCAGAGGAAGACTCGGTTACATATGCTCGCCGCTTTTACAAGTTTGGATTTTTGCTTCTTCCTTGGCTTTGGGCTGTCAATTGCTTCTACTTTTGGCCTGTCCTTCGTCACTCTCACTCCTTCCCTTCAATCCGACGCTATGTTGTTGGATCAGCTATAGGGTGCTCTATTGCCACTATCCTGCTGTCTTCATGGGCATTAACATTTTCTATTGGAGGGGAGCGCTTTTTTGGCCCGGTTTGGAACAAGCTTGTTATGTACAATGTTGCTGATCAGTTAGGTCTAACAGGTTGGATGTAG

Protein sequence

MERSGEEGSSSSSPSTSTLLPLQNPNISANTSAIRRPRWPTIDGPLGLSEEDSVTYARRFYKFGFLLLPWLWAVNCFYFWPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIGGERFFGPVWNKLVMYNVADQLGLTGWM
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02452.1Spo02452.1mRNA


Homology
[Close]
BLAST of Spo02452.1 vs. NCBI nr
Match: gi|902156529|gb|KNA06022.1| (hypothetical protein SOVF_184910 [Spinacia oleracea])

HSP 1 Score: 303.5 bits (776), Expect = 2.000e-79
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 1 

		  

Query: 1   MERSGEEGSSSSSPSTSTLLPLQNPNISANTSAIRRPRWPTIDGPLGLSEEDSVTYARRF 60
           MERSGEEGSSSSSPSTSTLLPLQNPNISANTSAIRRPRWPTIDGPLGLSEEDSVTYARRF
Sbjct: 1   MERSGEEGSSSSSPSTSTLLPLQNPNISANTSAIRRPRWPTIDGPLGLSEEDSVTYARRF 60

Query: 61  YKFGFLLLPWLWAVNCFYFWPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIG 120
           YKFGFLLLPWLWAVNCFYFWPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIG
Sbjct: 61  YKFGFLLLPWLWAVNCFYFWPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIG 120

Query: 121 GERFFGPVWNKLVMYNVADQLGLTGWM 148
           GER FGPVWNKLVMYNVADQLGLTGWM
Sbjct: 121 GERLFGPVWNKLVMYNVADQLGLTGWM 147
[Close]
BLAST of Spo02452.1 vs. NCBI nr
Match: gi|731338208|ref|XP_010680204.1| (PREDICTED: probable gamma-secretase subunit PEN-2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 245.4 bits (625), Expect = 6.400e-62
Identity = 122/147 (82.99%), Postives = 128/147 (87.07%), Query Frame = 1 

		  

Query: 1   MERSGEEGSSSSSPSTSTLLPLQNPNISANTSAIRRPRWPTIDGPLGLSEEDSVTYARRF 60
           MERS  EG SSSS   ST LPLQNPNIS+N+     PRWPTIDG LGLSEE+SV YARRF
Sbjct: 1   MERS-REGVSSSSTGESTFLPLQNPNISSNS-----PRWPTIDGALGLSEEESVIYARRF 60

Query: 61  YKFGFLLLPWLWAVNCFYFWPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIG 120
           YKFGFLLLPWLWA+NCFYFWPVLRHS SFPS RRYVVGSA+G SIATILLSSWALTFSIG
Sbjct: 61  YKFGFLLLPWLWALNCFYFWPVLRHSSSFPSFRRYVVGSAVGFSIATILLSSWALTFSIG 120

Query: 121 GERFFGPVWNKLVMYNVADQLGLTGWM 148
           GER FGPVWN+LVMYNVADQLGL GWM
Sbjct: 121 GERLFGPVWNQLVMYNVADQLGLAGWM 141
[Close]
BLAST of Spo02452.1 vs. NCBI nr
Match: gi|357464679|ref|XP_003602621.1| (GDP-mannose transporter, putative [Medicago truncatula])

HSP 1 Score: 205.3 bits (521), Expect = 7.300e-50
Identity = 93/123 (75.61%), Postives = 104/123 (84.55%), Query Frame = 1 

		  

Query: 24  NPNISANTSAIRRPRWPTIDGPLGLSEEDSVTYARRFYKFGFLLLPWLWAVNCFYFWPVL 83
           NPN + N  A+  P WPTIDGPLGLSEE+SV YARRFYKFGF LLP LWAVNCFYFWPV+
Sbjct: 10  NPNPNPNPLALSVPVWPTIDGPLGLSEEESVKYARRFYKFGFALLPLLWAVNCFYFWPVI 69

Query: 84  RHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIGGERFFGPVWNKLVMYNVADQLGL 143
           RHSHSFP IR YVVGSA+G ++   LL SWALTFSIGGER FGPVW++LVMYN+AD+ GL
Sbjct: 70  RHSHSFPRIRPYVVGSAVGFTVFATLLCSWALTFSIGGERLFGPVWDQLVMYNLADRFGL 129

Query: 144 TGW 147
           TGW
Sbjct: 130 TGW 132
[Close]
BLAST of Spo02452.1 vs. NCBI nr
Match: gi|955324463|ref|XP_014631956.1| (PREDICTED: probable gamma-secretase subunit PEN-2 [Glycine max])

HSP 1 Score: 204.5 bits (519), Expect = 1.200e-49
Identity = 97/127 (76.38%), Postives = 106/127 (83.46%), Query Frame = 1 

		  

Query: 21  PLQNPNISANTS-AIRRPRWPTIDGPLGLSEEDSVTYARRFYKFGFLLLPWLWAVNCFYF 80
           P  NPN + N S A   P WPTIDGPLGLSEE+SV YARRFYKFGF LLP LWAVNCFYF
Sbjct: 9   PNPNPNPNRNNSVASSVPVWPTIDGPLGLSEEESVGYARRFYKFGFALLPLLWAVNCFYF 68

Query: 81  WPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIGGERFFGPVWNKLVMYNVAD 140
           WP LRHSHSFP IR YVVGSAIG ++   LLSSWALTF+IGGER FGPVW++LVMYN+AD
Sbjct: 69  WPALRHSHSFPRIRPYVVGSAIGFAVFATLLSSWALTFAIGGERLFGPVWDQLVMYNLAD 128

Query: 141 QLGLTGW 147
           +LGLTGW
Sbjct: 129 RLGLTGW 135
[Close]
BLAST of Spo02452.1 vs. NCBI nr
Match: gi|955317357|ref|XP_014630358.1| (PREDICTED: probable gamma-secretase subunit PEN-2 isoform X2 [Glycine max])

HSP 1 Score: 203.8 bits (517), Expect = 2.100e-49
Identity = 96/127 (75.59%), Postives = 105/127 (82.68%), Query Frame = 1 

		  

Query: 21  PLQNPNISANTS-AIRRPRWPTIDGPLGLSEEDSVTYARRFYKFGFLLLPWLWAVNCFYF 80
           P  NPN   N S A   P WPTIDGPLGLSEE+SV YARRFY FGF LLP LWAVNCFYF
Sbjct: 10  PNPNPNPHRNNSVASSMPLWPTIDGPLGLSEEESVGYARRFYTFGFALLPLLWAVNCFYF 69

Query: 81  WPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIGGERFFGPVWNKLVMYNVAD 140
           WPVLRHSHSFP IR YVVGSAIG ++   LLSSW+LTF+IGGER FGPVW++LVMYN+AD
Sbjct: 70  WPVLRHSHSFPRIRPYVVGSAIGFAVCATLLSSWSLTFAIGGERLFGPVWDQLVMYNLAD 129

Query: 141 QLGLTGW 147
           +LGLTGW
Sbjct: 130 RLGLTGW 136
[Close]
BLAST of Spo02452.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QFI0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_184910 PE=4 SV=1)

HSP 1 Score: 303.5 bits (776), Expect = 1.400e-79
Identity = 146/147 (99.32%), Postives = 146/147 (99.32%), Query Frame = 1 

		  

Query: 1   MERSGEEGSSSSSPSTSTLLPLQNPNISANTSAIRRPRWPTIDGPLGLSEEDSVTYARRF 60
           MERSGEEGSSSSSPSTSTLLPLQNPNISANTSAIRRPRWPTIDGPLGLSEEDSVTYARRF
Sbjct: 1   MERSGEEGSSSSSPSTSTLLPLQNPNISANTSAIRRPRWPTIDGPLGLSEEDSVTYARRF 60

Query: 61  YKFGFLLLPWLWAVNCFYFWPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIG 120
           YKFGFLLLPWLWAVNCFYFWPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIG
Sbjct: 61  YKFGFLLLPWLWAVNCFYFWPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIG 120

Query: 121 GERFFGPVWNKLVMYNVADQLGLTGWM 148
           GER FGPVWNKLVMYNVADQLGLTGWM
Sbjct: 121 GERLFGPVWNKLVMYNVADQLGLTGWM 147
[Close]
BLAST of Spo02452.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CAW3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g132590 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.500e-62
Identity = 122/147 (82.99%), Postives = 128/147 (87.07%), Query Frame = 1 

		  

Query: 1   MERSGEEGSSSSSPSTSTLLPLQNPNISANTSAIRRPRWPTIDGPLGLSEEDSVTYARRF 60
           MERS  EG SSSS   ST LPLQNPNIS+N+     PRWPTIDG LGLSEE+SV YARRF
Sbjct: 1   MERS-REGVSSSSTGESTFLPLQNPNISSNS-----PRWPTIDGALGLSEEESVIYARRF 60

Query: 61  YKFGFLLLPWLWAVNCFYFWPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIG 120
           YKFGFLLLPWLWA+NCFYFWPVLRHS SFPS RRYVVGSA+G SIATILLSSWALTFSIG
Sbjct: 61  YKFGFLLLPWLWALNCFYFWPVLRHSSSFPSFRRYVVGSAVGFSIATILLSSWALTFSIG 120

Query: 121 GERFFGPVWNKLVMYNVADQLGLTGWM 148
           GER FGPVWN+LVMYNVADQLGL GWM
Sbjct: 121 GERLFGPVWNQLVMYNVADQLGLAGWM 141
[Close]
BLAST of Spo02452.1 vs. UniProtKB/TrEMBL
Match: G7JBL2_MEDTR (GDP-mannose transporter, putative OS=Medicago truncatula GN=MTR_3g096320 PE=2 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 5.100e-50
Identity = 93/123 (75.61%), Postives = 104/123 (84.55%), Query Frame = 1 

		  

Query: 24  NPNISANTSAIRRPRWPTIDGPLGLSEEDSVTYARRFYKFGFLLLPWLWAVNCFYFWPVL 83
           NPN + N  A+  P WPTIDGPLGLSEE+SV YARRFYKFGF LLP LWAVNCFYFWPV+
Sbjct: 10  NPNPNPNPLALSVPVWPTIDGPLGLSEEESVKYARRFYKFGFALLPLLWAVNCFYFWPVI 69

Query: 84  RHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIGGERFFGPVWNKLVMYNVADQLGL 143
           RHSHSFP IR YVVGSA+G ++   LL SWALTFSIGGER FGPVW++LVMYN+AD+ GL
Sbjct: 70  RHSHSFPRIRPYVVGSAVGFTVFATLLCSWALTFSIGGERLFGPVWDQLVMYNLADRFGL 129

Query: 144 TGW 147
           TGW
Sbjct: 130 TGW 132
[Close]
BLAST of Spo02452.1 vs. UniProtKB/TrEMBL
Match: A0A0B2PPM2_GLYSO (Putative gamma-secretase subunit PEN-2 OS=Glycine soja GN=glysoja_011887 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 8.700e-50
Identity = 97/127 (76.38%), Postives = 106/127 (83.46%), Query Frame = 1 

		  

Query: 21  PLQNPNISANTS-AIRRPRWPTIDGPLGLSEEDSVTYARRFYKFGFLLLPWLWAVNCFYF 80
           P  NPN + N S A   P WPTIDGPLGLSEE+SV YARRFYKFGF LLP LWAVNCFYF
Sbjct: 9   PNPNPNPNRNNSVASSVPVWPTIDGPLGLSEEESVGYARRFYKFGFALLPLLWAVNCFYF 68

Query: 81  WPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIGGERFFGPVWNKLVMYNVAD 140
           WP LRHSHSFP IR YVVGSAIG ++   LLSSWALTF+IGGER FGPVW++LVMYN+AD
Sbjct: 69  WPALRHSHSFPRIRPYVVGSAIGFAVFATLLSSWALTFAIGGERLFGPVWDQLVMYNLAD 128

Query: 141 QLGLTGW 147
           +LGLTGW
Sbjct: 129 RLGLTGW 135
[Close]
BLAST of Spo02452.1 vs. UniProtKB/TrEMBL
Match: I1KBJ6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_06G153700 PE=4 SV=1)

HSP 1 Score: 204.5 bits (519), Expect = 8.700e-50
Identity = 97/127 (76.38%), Postives = 106/127 (83.46%), Query Frame = 1 

		  

Query: 21  PLQNPNISANTS-AIRRPRWPTIDGPLGLSEEDSVTYARRFYKFGFLLLPWLWAVNCFYF 80
           P  NPN + N S A   P WPTIDGPLGLSEE+SV YARRFYKFGF LLP LWAVNCFYF
Sbjct: 9   PNPNPNPNRNNSVASSVPVWPTIDGPLGLSEEESVGYARRFYKFGFALLPLLWAVNCFYF 68

Query: 81  WPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIGGERFFGPVWNKLVMYNVAD 140
           WP LRHSHSFP IR YVVGSAIG ++   LLSSWALTF+IGGER FGPVW++LVMYN+AD
Sbjct: 69  WPALRHSHSFPRIRPYVVGSAIGFAVFATLLSSWALTFAIGGERLFGPVWDQLVMYNLAD 128

Query: 141 QLGLTGW 147
           +LGLTGW
Sbjct: 129 RLGLTGW 135
[Close]
BLAST of Spo02452.1 vs. ExPASy Swiss-Prot
Match: PEN2_ARATH (Probable gamma-secretase subunit PEN-2 OS=Arabidopsis thaliana GN=At5g09310 PE=2 SV=1)

HSP 1 Score: 188.7 bits (478), Expect = 4.400e-47
Identity = 94/143 (65.73%), Postives = 111/143 (77.62%), Query Frame = 1 

		  

Query: 7   EGSSSSSPSTSTLL---PLQNPNISANTSAIRRPR-WPTIDGPLGLSEEDSVTYARRFYK 66
           E + S  PS + +    P  NPN +  ++ I   + WPTIDGPLGL+EE SV YARRFYK
Sbjct: 2   EATRSDDPSLNPIRNRNPNPNPNPNPLSTIISSAQVWPTIDGPLGLTEEASVDYARRFYK 61

Query: 67  FGFLLLPWLWAVNCFYFWPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIGGE 126
           FGF LLPWLW VNCFYFWPVLRHS +FP IR YVV SAIG S+ T LLS+WALTFSIGGE
Sbjct: 62  FGFALLPWLWFVNCFYFWPVLRHSRAFPQIRNYVVRSAIGFSVFTALLSAWALTFSIGGE 121

Query: 127 RFFGPVWNKLVMYNVADQLGLTG 146
           + FGP+++KLVMYNVAD+LGL+G
Sbjct: 122 QLFGPLYDKLVMYNVADRLGLSG 144
[Close]
BLAST of Spo02452.1 vs. TAIR (Arabidopsis)
Match: AT5G09310.1 (Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379))

HSP 1 Score: 188.7 bits (478), Expect = 2.500e-48
Identity = 94/143 (65.73%), Postives = 111/143 (77.62%), Query Frame = 1 

		  

Query: 7   EGSSSSSPSTSTLL---PLQNPNISANTSAIRRPR-WPTIDGPLGLSEEDSVTYARRFYK 66
           E + S  PS + +    P  NPN +  ++ I   + WPTIDGPLGL+EE SV YARRFYK
Sbjct: 2   EATRSDDPSLNPIRNRNPNPNPNPNPLSTIISSAQVWPTIDGPLGLTEEASVDYARRFYK 61

Query: 67  FGFLLLPWLWAVNCFYFWPVLRHSHSFPSIRRYVVGSAIGCSIATILLSSWALTFSIGGE 126
           FGF LLPWLW VNCFYFWPVLRHS +FP IR YVV SAIG S+ T LLS+WALTFSIGGE
Sbjct: 62  FGFALLPWLWFVNCFYFWPVLRHSRAFPQIRNYVVRSAIGFSVFTALLSAWALTFSIGGE 121

Query: 127 RFFGPVWNKLVMYNVADQLGLTG 146
           + FGP+++KLVMYNVAD+LGL+G
Sbjct: 122 QLFGPLYDKLVMYNVADRLGLSG 144
The following BLAST results are available for this feature:
BLAST of Spo02452.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902156529|gb|KNA06022.1|2.0e-7999.3hypothetical protein SOVF_1849... [more]
gi|731338208|ref|XP_010680204.1|6.4e-6282.9PREDICTED: probable gamma-secr... [more]
gi|357464679|ref|XP_003602621.1|7.3e-5075.6GDP-mannose transporter, putat... [more]
gi|955324463|ref|XP_014631956.1|1.2e-4976.3PREDICTED: probable gamma-secr... [more]
gi|955317357|ref|XP_014630358.1|2.1e-4975.5PREDICTED: probable gamma-secr... [more]
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BLAST of Spo02452.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QFI0_SPIOL1.4e-7999.3Uncharacterized protein OS=Spi... [more]
A0A0J8CAW3_BETVU4.5e-6282.9Uncharacterized protein OS=Bet... [more]
G7JBL2_MEDTR5.1e-5075.6GDP-mannose transporter, putat... [more]
A0A0B2PPM2_GLYSO8.7e-5076.3Putative gamma-secretase subun... [more]
I1KBJ6_SOYBN8.7e-5076.3Uncharacterized protein OS=Gly... [more]
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BLAST of Spo02452.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PEN2_ARATH4.4e-4765.7Probable gamma-secretase subun... [more]
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BLAST of Spo02452.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT5G09310.12.5e-4865.7Gamma-secretase aspartyl prote... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019379Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunitPFAMPF10251PEN-2coord: 50..137
score: 2.1
NoneNo IPR availablePANTHERPTHR16318GAMMA-SECRETASE SUBUNIT PEN-2coord: 14..146
score: 4.4
NoneNo IPR availablePANTHERPTHR16318:SF0GAMMA-SECRETASE SUBUNIT PEN-2coord: 14..146
score: 4.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007219 Notch signaling pathway
biological_process GO:0009407 toxin catabolic process
biological_process GO:0006857 oligopeptide transport
biological_process GO:0006096 glycolytic process
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0051788 response to misfolded protein
biological_process GO:0006412 translation
biological_process GO:0001510 RNA methylation
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0009651 response to salt stress
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0080167 response to karrikin
biological_process GO:0006508 proteolysis
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0042545 cell wall modification
biological_process GO:0006909 phagocytosis
biological_process GO:0008152 metabolic process
biological_process GO:0055085 transmembrane transport
biological_process GO:0008643 carbohydrate transport
cellular_component GO:0005829 cytosol
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0005634 nucleus
cellular_component GO:0009506 plasmodesma
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005618 cell wall
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0016020 membrane
cellular_component GO:0005576 extracellular region
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009706 chloroplast inner membrane
molecular_function GO:0005215 transporter activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0046872 metal ion binding
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0005351 carbohydrate:proton symporter activity
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0016787 hydrolase activity
RNA-Seq Expression