Spo08712 (gene) | SpinachBase

Overview


Name	Spo08712
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	AT5g16110/T21H19_30
Location	chr3 : 83429468 .. 83431970 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTTCTGTGGGATCCAGCAAAACGGTGTAGCATCTCGTGAAGAGATGATGAGCTTCGTTTCCTTTTCTGGTGGTCGTAATATAGATCGAAAAGACTCGGTGGTTTGCCCCAAACCTCGCCGTGTCGGCGCCCTTAACACCACCTTCAACGACTCTTCTAGGCCTCCTATCCGTTGGCACTTTGGGTAATTTCATTATTATTTTAAATTAATTAGAATTTCTCATTTCTGATCTTTCGCCCCGGCTCCCCCTTTTTTGGGTCTGATAATTTTCTTTTTATATTTGTATGTTCTAACTTGATTTAATCTGGTTGAATTTAACAGGCATCATTCAGAAATATCTGATTCCAGAGCTGGGTCTGAGCTGTTAGACATAATCCTTAGTAAGGTATAAATATTTACAATTTCTTATAATTTGTTTGAATTTGATAAAAGTCCCAACACTTTCCTTTTTCGTTTATCCCCAATTCGTGGGGTTGTGTTTAGTGAAATTAATGGGATGTTAATGATTTTTTTTTATGGAAATCGATCTGATTTTTATGTTTGTTCCAGTGTTATCCTTGATTTGGGTGCTTTTTAGTAGACGTGAATTGAATTTGGTAATAGACGAAGCGCTTTTCGTTTCTGTCCGTCCCAAATTAGAGGTATTTTTTTCTTTTATAAAATTACGAAGAAATTAGTGAAAAATTACAAGGGAAATGATTAGTTTTGTAGTTTTGTTATTCTTGATTTGGGTGCTTAAATTTAGGATAAAGTCCTTGATTGAATGATTTGTTATGTGTGGTTGATAAATTGATATGGTGGGTGGAGAAAATGCCATAATTATAAAAGGGGAAGAGAGATCTGATCTGAGCTTGTGGTGTTTTGTGTTGTAAAGCAAATTTTTAATGAGCGAAAGGGCAATCTGTGTATGGCCAACTAACTTGTCTTTGTCAGTGCAACTTGTAGATTAAAGTTTCCAATTTCAAATTTAAATGTGTATAAGACAAGTTGAAGGGTGCTTTCTTGGTAATTATAGTATACTAATTTTATGTGATTACGTATGTTGTAAAATGCTTTCTTTATTCTGTTTGTGTCCAAATTTGTGATTAATTCTTTATTTAATTTGATTTGTCTTTGACTAATCTTTCTTAACTTTTGGCATGATATATTGTCCATTTATCGAGTATTCCGTATAACTTACAGCAAAGTATTATGAAAGTGATATACTGATATGGTCTGTTGTCGTGATTGAACTGTAAATGTATAATTAAATAAAAAGTTCCGTATTAACTTACAGCAAAGTGTTATGAAAGTGATATTGGTCTGTTGTCGTGATTGAACTGTAAATGTATAATTAATAAAAAGTGGAATATGTTGTACTCCGTATTAGGTTAAATTACATATGGGATCTAACAGAATGAAGTATGTTTGACACAGGGTGTTCATGGTGCTGAAAGGCCAAGCATGCCAGTAGCTTCATCGCCCCCATTTTTCTGCGGGTCGCCACCAAGTAGAGTCTCTAACCCATTAATTCAGGACGCTCGATTCAGGGAGGAAAAACAGCTAATTCCTCCATTTTCACCATTACCATCACCATCGCTGATACAGATTACTGCTCCAGGATCTATGTCCTCTCCCAACTCCTCCTCCACAAGGAAAGGGGGATGTAACAGGGCGAATTTTGGTAACAATCCTTCAGTTAGAGTTGAAGGGTTTGATTGCCTTGACAGGGACAGCAGGAACTGCAGCATCCCTGCTTTGGCTTAGTAATCCAATCCCATCATCTTAAAAAAAAAGTACATATAGTGAACATCAAAACAGAAAAAAAGCCTTTAAAGGCGAAAGTATAACATTTTAGCGAGGGGAAAAGATAGCAGCAGCATGAGAAGAATTTTGATAATTTCTCAGAGCAAAGAGATTGAAGAGTTTTGATTTTGCAGTGTAAATATGGAGTTTGTTTAGAAGGGGTTCCTTTTTTGTAAGTAAATAAATCCCATGTAAGTAGTTTTGACTTAAAATAAGGTTGGGAAGAGTTAGAGTCTGGTGGTAGTTTTCTAAGTGAGAAATTTGGTTGTTTTATTTTCTGTTTTTCTTCTCTTTTTGAGTCAATGTGAATACGAGGGAGGGAATTCATTCTGGTATTTGTGGTTTATGTGGGAAGAAAAGAAGTTTGTATAAAAGCTGTTTTTGTTAAGGATGTCTTTTTACTAAACTAGTAGTAATAGGTCAGTGTAAATATGAAGCCCTTTGAGGGTCTTTTTACTAGTAAGTACGGAGTATGGTATTGTTATTTATGTTACTCCGTATTGTGGTTTAATTCAACAAGTTTCTTGTACTGTTTATTAGGCGCAAAACATTTAACGTGTTGGTTTTTGCACTATACCAAGTATTTCACATGCTTTGGACTAGTGTATGGCTGAATGATGACAGCATTAAATGCGGATTATTCTTGCTTGTACTTGATCCACAATAGTATTAGTGTGGATTTTAAATCAATACTCCGTAGTTTTCTTTAGCAC

mRNA sequence

ATGAATTTCTGTGGGATCCAGCAAAACGGTGTAGCATCTCGTGAAGAGATGATGAGCTTCGTTTCCTTTTCTGGTGGTCGTAATATAGATCGAAAAGACTCGGTGGTTTGCCCCAAACCTCGCCGTGTCGGCGCCCTTAACACCACCTTCAACGACTCTTCTAGGCCTCCTATCCGTTGGCACTTTGGGCATCATTCAGAAATATCTGATTCCAGAGCTGGGTCTGAGCTGTTAGACATAATCCTTAGTAAGGGTGTTCATGGTGCTGAAAGGCCAAGCATGCCAGTAGCTTCATCGCCCCCATTTTTCTGCGGGTCGCCACCAAGTAGAGTCTCTAACCCATTAATTCAGGACGCTCGATTCAGGGAGGAAAAACAGCTAATTCCTCCATTTTCACCATTACCATCACCATCGCTGATACAGATTACTGCTCCAGGATCTATGTCCTCTCCCAACTCCTCCTCCACAAGGAAAGGGGGATGTAACAGGGCGAATTTTGGTAACAATCCTTCAGTTAGAGTTGAAGGGTTTGATTGCCTTGACAGGGACAGCAGGAACTGCAGCATCCCTGCTTTGGCTTAGTAATCCAATCCCATCATCTTAAAAAAAAAGTACATATAGTGAACATCAAAACAGAAAAAAAGCCTTTAAAGGCGAAAGTATAACATTTTAGCGAGGGGAAAAGATAGCAGCAGCATGAGAAGAATTTTGATAATTTCTCAGAGCAAAGAGATTGAAGAGTTTTGATTTTGCAGTGTAAATATGGAGTTTGTTTAGAAGGGGTTCCTTTTTTGTAAGTAAATAAATCCCATGTAAGTAGTTTTGACTTAAAATAAGGTTGGGAAGAGTTAGAGTCTGGTGGTAGTTTTCTAAGTGAGAAATTTGGTTGTTTTATTTTCTGTTTTTCTTCTCTTTTTGAGTCAATGTGAATACGAGGGAGGGAATTCATTCTGGTATTTGTGGTTTATGTGGGAAGAAAAGAAGTTTGTATAAAAGCTGTTTTTGTTAAGGATGTCTTTTTACTAAACTAGTAGTAATAGGTCAGTGTAAATATGAAGCCCTTTGAGGGTCTTTTTACTAGTAAGTACGGAGTATGGTATTGTTATTTATGTTACTCCGTATTGTGGTTTAATTCAACAAGTTTCTTGTACTGTTTATTAGGCGCAAAACATTTAACGTGTTGGTTTTTGCACTATACCAAGTATTTCACATGCTTTGGACTAGTGTATGGCTGAATGATGACAGCATTAAATGCGGATTATTCTTGCTTGTACTTGATCCACAATAGTATTAGTGTGGATTTTAAATCAATACTCCGTAGTTTTCTTTAGCAC

Coding sequence (CDS)

ATGAATTTCTGTGGGATCCAGCAAAACGGTGTAGCATCTCGTGAAGAGATGATGAGCTTCGTTTCCTTTTCTGGTGGTCGTAATATAGATCGAAAAGACTCGGTGGTTTGCCCCAAACCTCGCCGTGTCGGCGCCCTTAACACCACCTTCAACGACTCTTCTAGGCCTCCTATCCGTTGGCACTTTGGGCATCATTCAGAAATATCTGATTCCAGAGCTGGGTCTGAGCTGTTAGACATAATCCTTAGTAAGGGTGTTCATGGTGCTGAAAGGCCAAGCATGCCAGTAGCTTCATCGCCCCCATTTTTCTGCGGGTCGCCACCAAGTAGAGTCTCTAACCCATTAATTCAGGACGCTCGATTCAGGGAGGAAAAACAGCTAATTCCTCCATTTTCACCATTACCATCACCATCGCTGATACAGATTACTGCTCCAGGATCTATGTCCTCTCCCAACTCCTCCTCCACAAGGAAAGGGGGATGTAACAGGGCGAATTTTGGTAACAATCCTTCAGTTAGAGTTGAAGGGTTTGATTGCCTTGACAGGGACAGCAGGAACTGCAGCATCCCTGCTTTGGCTTAG

Protein sequence

MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRWHFGHHSEISDSRAGSELLDIILSKGVHGAERPSMPVASSPPFFCGSPPSRVSNPLIQDARFREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDCLDRDSRNCSIPALA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo08712.1	Spo08712.1	mRNA

Homology

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BLAST of Spo08712.1 vs. NCBI nr
Match: gi|902116345|gb|KNA03895.1| (hypothetical protein SOVF_204780 [Spinacia oleracea])

HSP 1 Score: 394.8 bits (1013), Expect = 8.600e-107
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW
Sbjct: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60

Query: 61  HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMPVASSPPFFCGSPPSRVSNPLIQDAR 120
           HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMPVASSPPFFCGSPPSRVSNPLIQDAR
Sbjct: 61  HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMPVASSPPFFCGSPPSRVSNPLIQDAR 120

Query: 121 FREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDCL 180
           FREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDCL
Sbjct: 121 FREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDCL 180

Query: 181 DRDSRNCSIPALA 194
           DRDSRNCSIPALA
Sbjct: 181 DRDSRNCSIPALA 193

[Close]

BLAST of Spo08712.1 vs. NCBI nr
Match: gi|731340686|ref|XP_010681533.1| (PREDICTED: uncharacterized protein LOC104896483 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 274.6 bits (701), Expect = 1.300e-70
Identity = 149/193 (77.20%), Postives = 158/193 (81.87%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MN+CGIQQNGV S EE  SFVS SGGR    K SVVCPKPRRV       ND+SR P+RW
Sbjct: 1   MNYCGIQQNGVVSCEETRSFVSVSGGR----KGSVVCPKPRRVAPT----NDASR-PMRW 60

Query: 61  HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMPVASSPPFFCGSPPSRVSNPLIQDAR 120
           HFGHHS+ISDSRAGSELLDIILSKGVHGAER +  VASSPPFFCGSPPSRVSNPLIQD R
Sbjct: 61  HFGHHSDISDSRAGSELLDIILSKGVHGAERTNTQVASSPPFFCGSPPSRVSNPLIQDVR 120

Query: 121 FREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDCL 180
           FREEKQLI PFS  PS S IQ  A GS SSPNSS+ RK GC RANFG+NP++RVEGFDCL
Sbjct: 121 FREEKQLISPFSSKPS-SPIQAAASGSASSPNSSA-RKVGCVRANFGSNPAMRVEGFDCL 180

Query: 181 DRDSRNCSIPALA 194
           DRD RNCSIPALA
Sbjct: 181 DRDRRNCSIPALA 182

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BLAST of Spo08712.1 vs. NCBI nr
Match: gi|747042113|ref|XP_011076753.1| (PREDICTED: uncharacterized protein LOC105160920 [Sesamum indicum])

HSP 1 Score: 226.5 bits (576), Expect = 4.000e-56
Identity = 118/193 (61.14%), Postives = 145/193 (75.13%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MN C IQQN  A+ EE+ +  + + GR++D+K++VVCPKPRR+G ++TT + S   P RW
Sbjct: 1   MNHCAIQQNSFAACEEIWASAA-AAGRSVDKKEAVVCPKPRRLGLIHTTLDPSYARPFRW 60

Query: 61  HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMPVASSPPFFCGSPPSRVSNPLIQDAR 120
           H  H  E  D++AG+ELLDIIL+KG  G+++    VASSPPFFCGSPPSRVSNPLIQDAR
Sbjct: 61  HMSHQQEDCDAKAGNELLDIILAKGGSGSDQSVAQVASSPPFFCGSPPSRVSNPLIQDAR 120

Query: 121 FREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDCL 180
           F +EK     F+P+ SP  I I    S  +P+ SSTRKGGC RANFGNNP+VRVEGFDCL
Sbjct: 121 FGDEK-----FTPV-SPRAIPIP---SGPAPSPSSTRKGGCVRANFGNNPAVRVEGFDCL 180

Query: 181 DRDSRNCSIPALA 194
           DRD RNCSIPALA
Sbjct: 181 DRDRRNCSIPALA 183

[Close]

BLAST of Spo08712.1 vs. NCBI nr
Match: gi|565354472|ref|XP_006344134.1| (PREDICTED: uncharacterized protein LOC102605157 [Solanum tuberosum])

HSP 1 Score: 221.9 bits (564), Expect = 9.900e-55
Identity = 121/194 (62.37%), Postives = 140/194 (72.16%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MN C IQQ   A+ E+M S VS       D+KD+VVCPKPRR+G LN T  +  RP +RW
Sbjct: 1   MNHCAIQQGAFAACEDMWSSVSSIS----DKKDAVVCPKPRRLGLLNATITEPLRP-LRW 60

Query: 61  HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMP-VASSPPFFCGSPPSRVSNPLIQDA 120
           H  H  E+ DSRAG++LLDIIL+KG  GA++ S   VASSPPFFCGSPPSRVSNPLIQDA
Sbjct: 61  HVSHQQELCDSRAGADLLDIILAKGGGGADQSSAAQVASSPPFFCGSPPSRVSNPLIQDA 120

Query: 121 RFREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDC 180
           RF +EK  + P SP   P       P  ++S  S+STRKGGC RANFGNNP+VRVEGFDC
Sbjct: 121 RFGDEK--VTPVSPRAIP------IPSGLASSPSTSTRKGGCVRANFGNNPAVRVEGFDC 180

Query: 181 LDRDSRNCSIPALA 194
           LDRD RNCSIPALA
Sbjct: 181 LDRDRRNCSIPALA 181

[Close]

BLAST of Spo08712.1 vs. NCBI nr
Match: gi|460386488|ref|XP_004238930.1| (PREDICTED: uncharacterized protein LOC101254996 [Solanum lycopersicum])

HSP 1 Score: 220.3 bits (560), Expect = 2.900e-54
Identity = 120/194 (61.86%), Postives = 139/194 (71.65%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MN C IQQ   A+ E+M S VS       D+KD+VVCPKPRR+G LN T  +  RP +RW
Sbjct: 1   MNHCAIQQGAFAACEDMWSSVSSIS----DKKDAVVCPKPRRLGLLNATITEPIRP-LRW 60

Query: 61  HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMP-VASSPPFFCGSPPSRVSNPLIQDA 120
           H  H  E+ DSRAG++LLDIIL+KG  GA++ S   VASSPPFFCGSPPSRVSNPLIQDA
Sbjct: 61  HVSHQQELCDSRAGADLLDIILAKGGGGADQSSAAQVASSPPFFCGSPPSRVSNPLIQDA 120

Query: 121 RFREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDC 180
           RF +EK  + P SP   P       P  ++S  S+STRKGGC RANFGNNP+VRVEGFDC
Sbjct: 121 RFGDEK--VTPVSPRAIP------IPSGLASSPSTSTRKGGCVRANFGNNPAVRVEGFDC 180

Query: 181 LDRDSRNCSIPALA 194
           LDRD RNCSIP LA
Sbjct: 181 LDRDRRNCSIPTLA 181

[Close]

BLAST of Spo08712.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q9D2_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_204780 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 6.000e-107
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW
Sbjct: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60

Query: 61  HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMPVASSPPFFCGSPPSRVSNPLIQDAR 120
           HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMPVASSPPFFCGSPPSRVSNPLIQDAR
Sbjct: 61  HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMPVASSPPFFCGSPPSRVSNPLIQDAR 120

Query: 121 FREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDCL 180
           FREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDCL
Sbjct: 121 FREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDCL 180

Query: 181 DRDSRNCSIPALA 194
           DRDSRNCSIPALA
Sbjct: 181 DRDSRNCSIPALA 193

[Close]

BLAST of Spo08712.1 vs. UniProtKB/TrEMBL
Match: A0A0J8C3E3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_6g141770 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 9.000e-71
Identity = 149/193 (77.20%), Postives = 158/193 (81.87%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MN+CGIQQNGV S EE  SFVS SGGR    K SVVCPKPRRV       ND+SR P+RW
Sbjct: 1   MNYCGIQQNGVVSCEETRSFVSVSGGR----KGSVVCPKPRRVAPT----NDASR-PMRW 60

Query: 61  HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMPVASSPPFFCGSPPSRVSNPLIQDAR 120
           HFGHHS+ISDSRAGSELLDIILSKGVHGAER +  VASSPPFFCGSPPSRVSNPLIQD R
Sbjct: 61  HFGHHSDISDSRAGSELLDIILSKGVHGAERTNTQVASSPPFFCGSPPSRVSNPLIQDVR 120

Query: 121 FREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDCL 180
           FREEKQLI PFS  PS S IQ  A GS SSPNSS+ RK GC RANFG+NP++RVEGFDCL
Sbjct: 121 FREEKQLISPFSSKPS-SPIQAAASGSASSPNSSA-RKVGCVRANFGSNPAMRVEGFDCL 180

Query: 181 DRDSRNCSIPALA 194
           DRD RNCSIPALA
Sbjct: 181 DRDRRNCSIPALA 182

[Close]

BLAST of Spo08712.1 vs. UniProtKB/TrEMBL
Match: M1B5R3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400014545 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.900e-55
Identity = 121/194 (62.37%), Postives = 140/194 (72.16%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MN C IQQ   A+ E+M S VS       D+KD+VVCPKPRR+G LN T  +  RP +RW
Sbjct: 1   MNHCAIQQGAFAACEDMWSSVSSIS----DKKDAVVCPKPRRLGLLNATITEPLRP-LRW 60

Query: 61  HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMP-VASSPPFFCGSPPSRVSNPLIQDA 120
           H  H  E+ DSRAG++LLDIIL+KG  GA++ S   VASSPPFFCGSPPSRVSNPLIQDA
Sbjct: 61  HVSHQQELCDSRAGADLLDIILAKGGGGADQSSAAQVASSPPFFCGSPPSRVSNPLIQDA 120

Query: 121 RFREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDC 180
           RF +EK  + P SP   P       P  ++S  S+STRKGGC RANFGNNP+VRVEGFDC
Sbjct: 121 RFGDEK--VTPVSPRAIP------IPSGLASSPSTSTRKGGCVRANFGNNPAVRVEGFDC 180

Query: 181 LDRDSRNCSIPALA 194
           LDRD RNCSIPALA
Sbjct: 181 LDRDRRNCSIPALA 181

[Close]

BLAST of Spo08712.1 vs. UniProtKB/TrEMBL
Match: A0A0V0I186_SOLCH (Putative translocase subunit seca-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.000e-54
Identity = 121/194 (62.37%), Postives = 140/194 (72.16%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MN C IQQ   A+ E+M S VS       D+KD+VVCPKPRR+G LN T  +  RP +RW
Sbjct: 1   MNHCAIQQGAFAACEDMWSSVSSIS----DKKDAVVCPKPRRLGLLNATITEPIRP-LRW 60

Query: 61  HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMP-VASSPPFFCGSPPSRVSNPLIQDA 120
           H  +  E+ DSRAG+ELLDIIL+KG  GA++ S   VASSPPFFCGSPPSRVSNPLIQDA
Sbjct: 61  HVSNQQELCDSRAGAELLDIILAKGGGGADQSSAAQVASSPPFFCGSPPSRVSNPLIQDA 120

Query: 121 RFREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDC 180
           RF +EK  + P SP   P       P  ++S  S+STRKGGC RANFGNNP+VRVEGFDC
Sbjct: 121 RFGDEK--VTPVSPRAIP------IPSGLASSPSTSTRKGGCVRANFGNNPAVRVEGFDC 180

Query: 181 LDRDSRNCSIPALA 194
           LDRD RNCSIPALA
Sbjct: 181 LDRDRRNCSIPALA 181

[Close]

BLAST of Spo08712.1 vs. UniProtKB/TrEMBL
Match: K4BXB0_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 2.000e-54
Identity = 120/194 (61.86%), Postives = 139/194 (71.65%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MN C IQQ   A+ E+M S VS       D+KD+VVCPKPRR+G LN T  +  RP +RW
Sbjct: 1   MNHCAIQQGAFAACEDMWSSVSSIS----DKKDAVVCPKPRRLGLLNATITEPIRP-LRW 60

Query: 61  HFGHHSEISDSRAGSELLDIILSKGVHGAERPSMP-VASSPPFFCGSPPSRVSNPLIQDA 120
           H  H  E+ DSRAG++LLDIIL+KG  GA++ S   VASSPPFFCGSPPSRVSNPLIQDA
Sbjct: 61  HVSHQQELCDSRAGADLLDIILAKGGGGADQSSAAQVASSPPFFCGSPPSRVSNPLIQDA 120

Query: 121 RFREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNPSVRVEGFDC 180
           RF +EK  + P SP   P       P  ++S  S+STRKGGC RANFGNNP+VRVEGFDC
Sbjct: 121 RFGDEK--VTPVSPRAIP------IPSGLASSPSTSTRKGGCVRANFGNNPAVRVEGFDC 180

Query: 181 LDRDSRNCSIPALA 194
           LDRD RNCSIP LA
Sbjct: 181 LDRDRRNCSIPTLA 181

[Close]

BLAST of Spo08712.1 vs. TAIR (Arabidopsis)
Match: AT1G68490.1 (unknown protein)

HSP 1 Score: 166.4 bits (420), Expect = 1.700e-41
Identity = 103/200 (51.50%), Postives = 130/200 (65.00%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDR-KDSVVCPKPRRVGALNTTFNDSSRPPIR 60
           MN   +Q N  A+  ++ S    S    ++R + +VVCPKPRR+G  N   + S    +R
Sbjct: 1   MNHFAVQPNAFAAGGDLRS----SSVSVVERDQTTVVCPKPRRIGLRNNHHHPSRS--LR 60

Query: 61  WHFGHHSEISDSRAGSELLDIILSKGVHGAERPSMPVASSP-PFFCGSPPSRVSNPLIQD 120
            +F H  E+ +S+A +++LDIIL+K  +GAE+ +  V  SP PF CGSPPSRV+NPL QD
Sbjct: 61  CYFSHQLELCESKAETDILDIILTKDGYGAEQVNKQVIDSPSPFLCGSPPSRVANPLTQD 120

Query: 121 ARFREE----KQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCN-RANFGNNPSVR 180
           ARFR+E      +IPP   LP PS          SSP+SSS RKGGC  R NFGN+P VR
Sbjct: 121 ARFRDEIVSVSSVIPPQLGLP-PS----------SSPSSSSGRKGGCVVRGNFGNSPKVR 180

Query: 181 VEGFDCLDRDSRNCSIPALA 194
           VEGFDCLDRDSRNCSIPALA
Sbjct: 181 VEGFDCLDRDSRNCSIPALA 183

[Close]

BLAST of Spo08712.1 vs. TAIR (Arabidopsis)
Match: AT5G16110.1 (unknown protein)

HSP 1 Score: 156.8 bits (395), Expect = 1.400e-38
Identity = 103/196 (52.55%), Postives = 127/196 (64.80%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MN C +QQN   SREEMM F         DRKD VVCPKPRRVG L    N+  RP +R 
Sbjct: 67  MNHCNLQQNAFMSREEMMGF---------DRKDLVVCPKPRRVGLLA---NNVIRP-LRL 126

Query: 61  HFGHHS-EISDSRAGSELLDIILSKGVHGAERPSMPVASSPPFFCGSPPSRVSNPLIQDA 120
           H    + ++ DS+AG+ELL+II  K  +G       ++SSPP+F GSPPSR +NPL QDA
Sbjct: 127 HMSQAAADLCDSKAGAELLEIIRRKEDNGTI--GQLLSSSPPYFPGSPPSRAANPLAQDA 186

Query: 121 RFREEKQLIPPFSPLPSPSLIQITAPGSMS-SPNSSSTRKGGCNRANFG-NNPSVRVEGF 180
           RFR+EK  + P SP  SP L   +A G  S S +SSS+   GC R  FG N+P+VRVEGF
Sbjct: 187 RFRDEK--LNPISP-NSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGF 244

Query: 181 DCLDRDSRNCSIPALA 194
           DCL+RD +N SIPA+A
Sbjct: 247 DCLNRDRQNSSIPAMA 244

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BLAST of Spo08712.1 vs. TAIR (Arabidopsis)
Match: AT1G13390.1 (unknown protein)

HSP 1 Score: 146.4 bits (368), Expect = 1.900e-35
Identity = 99/197 (50.25%), Postives = 118/197 (59.90%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MN CGIQQN     EEM    + S     DR+D+V+CPKPRRVGALN   + SSR  +RW
Sbjct: 2   MNSCGIQQNAF---EEMRRNAAVS-----DRRDAVICPKPRRVGALN---HHSSRS-LRW 61

Query: 61  HFGHHSEISDSRAGSELLDIILSKGVHGA-ERPSMPVASSPP-FFCGSPPSRVSNPLIQD 120
              H  E+ +S +GSE+LD IL+KG  G  E+       +PP FF GSPPSRVSNPL +D
Sbjct: 62  QLNHQMELCESNSGSEILDFILTKGGGGGGEQDQTRTVMTPPLFFTGSPPSRVSNPLTKD 121

Query: 121 ARFREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRA--NFGNNPSVRVEG 180
           + FREE  ++      PSPS  + T P   SSP     R G C  A  +FGNNP VRV G
Sbjct: 122 SLFREELLMVAS----PSPSTPRATKPQPPSSP-----RNGSCVMAATSFGNNPVVRVVG 176

Query: 181 FDCLDRDSRNCSIPALA 194
           FDC DR S N SI  LA
Sbjct: 182 FDC-DRRSSNRSISTLA 176

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BLAST of Spo08712.1 vs. TAIR (Arabidopsis)
Match: AT3G02555.1 (unknown protein)

HSP 1 Score: 124.8 bits (312), Expect = 5.800e-29
Identity = 89/196 (45.41%), Postives = 103/196 (52.55%), Query Frame = 1

		  
Query: 1   MNFCGIQQNGVASREEMMSFVSFSGGRNIDRKDSVVCPKPRRVGALNTTFNDSSRPPIRW 60
           MN C +QQN   SREE   FV           DSVVCPKPRR        N+  RP  R 
Sbjct: 1   MNHCSLQQNAFLSREESRGFVPIYS----HPVDSVVCPKPRRA-------NNVIRP-FRL 60

Query: 61  HFGHHS--EISDSRAGSELLDIILSKGVHGAERPSMPVASSPPFFCGSPPSRVSNPLIQD 120
           HF      ++ DS+AG +LLDI          R     + SPPFF GSPPSR +NPL QD
Sbjct: 61  HFSLSGADDVCDSKAGEDLLDIF--------RRKESVSSRSPPFFLGSPPSRAANPLAQD 120

Query: 121 ARFREEKQLIPPFSPLPSPSLIQITAPGSMSSPNSSSTRKGGCNRANFGNNP-SVRVEGF 180
           ARF +EK  +   SP  SP L             S+S  K GC R  FG  P +VRVEGF
Sbjct: 121 ARFGDEK--LNTVSPSLSPLL------------PSASRVKSGCGRMKFGVKPATVRVEGF 162

Query: 181 DCLDRDSRNCSIPALA 194
           DCL+RD  N SIPA+A
Sbjct: 181 DCLNRDRPNSSIPAMA 162

The following BLAST results are available for this feature:

BLAST of Spo08712.1 vs. NCBI nr
BLAST of Spo08712.1 vs. UniProtKB/TrEMBL
BLAST of Spo08712.1 vs. ExPASy Swiss-Prot
BLAST of Spo08712.1 vs. TAIR (Arabidopsis)

BLAST of Spo08712.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902116345\|gb\|KNA03895.1\|	8.6e-107	100.	hypothetical protein SOVF_2047...	[more]
gi\|731340686\|ref\|XP_010681533.1\|	1.3e-70	77.2	PREDICTED: uncharacterized pro...	[more]
gi\|747042113\|ref\|XP_011076753.1\|	4.0e-56	61.1	PREDICTED: uncharacterized pro...	[more]
gi\|565354472\|ref\|XP_006344134.1\|	9.9e-55	62.3	PREDICTED: uncharacterized pro...	[more]
gi\|460386488\|ref\|XP_004238930.1\|	2.9e-54	61.8	PREDICTED: uncharacterized pro...	[more]

BLAST of Spo08712.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9Q9D2_SPIOL	6.0e-107	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8C3E3_BETVU	9.0e-71	77.2	Uncharacterized protein OS=Bet...	[more]
M1B5R3_SOLTU	6.9e-55	62.3	Uncharacterized protein OS=Sol...	[more]
A0A0V0I186_SOLCH	2.0e-54	62.3	Putative translocase subunit s...	[more]
K4BXB0_SOLLC	2.0e-54	61.8	Uncharacterized protein OS=Sol...	[more]

BLAST of Spo08712.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0

Position :

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Match Name	E-value	Identity	Description

BLAST of Spo08712.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4

Position :

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Match Name	E-value	Identity	Description
AT1G68490.1	1.7e-41	51.5	unknown protein	[more]
AT5G16110.1	1.4e-38	52.5	unknown protein	[more]
AT1G13390.1	1.9e-35	50.2	unknown protein	[more]
AT3G02555.1	5.8e-29	45.4	unknown protein	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33384	FAMILY NOT NAMED	coord: 1..193 score: 3.9
None	No IPR available	PANTHER	PTHR33384:SF2	SUBFAMILY NOT NAMED	coord: 1..193 score: 3.9

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0019243	methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009534	chloroplast thylakoid
cellular_component	GO:0009840	chloroplastic endopeptidase Clp complex
molecular_function	GO:0050897	cobalt ion binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0004252	serine-type endopeptidase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016491	oxidoreductase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo26313	0.73	Barchart \| Table
Spo10817	0.71	Barchart \| Table
Spo10300	0.71	Barchart \| Table
Spo15882	0.71	Barchart \| Table
Spo23067	0.68	Barchart \| Table
Spo00064	0.67	Barchart \| Table
Spo00538	0.67	Barchart \| Table
Spo04387	0.66	Barchart \| Table
Spo10820	0.66	Barchart \| Table
Spo14378	0.66	Barchart \| Table
Spo04037	0.66	Barchart \| Table
Spo17884	0.66	Barchart \| Table
Spo03213	0.66	Barchart \| Table
Spo26206	0.66	Barchart \| Table
Spo01183	0.65	Barchart \| Table
Spo26205	0.65	Barchart \| Table