Spo16533 (gene)

Overview
NameSpo16533
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionTransmembrane protein, putative
Locationchr4 : 77826 .. 81102 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCGCCAAACTAAAAACTAGAGAGAGAAAGAAATTTTCATTTTGCGCCATCAAATAAATCACCCAAAATTTGAGTGCCATAACCAAATCAGTGAATTTGAGCCCTCATAACCCAAAAATTTCAAGAAAAATCAAAACCCTCCATCGTTTTCTCTTTCCTCCATCGTTCTCTCTCTTCAGAACCAGAACAAACTTCTCTGATTCAACATCAACAATGGAGGGTGAGAAAAACTTGAATTTCCGACAAGGTTTCCCTCTTTCTCTCTTTAGATTTTCGATTTTATGGTTTATGATGGAATGATGTTAATATGGCAATTTTAATTTAAGTTTAGTTGAGTATAGTGAAATTTGAGTAGAATCAATTTGCTGAAATCGATCGAATTTGGAGATGAATTTCCGTAATTTAGGGTTTGAGAGGAGAGAGAAAAAGGATTTCAATTTTGATGTGAGTTTTTTTAACCCATAGTTTTATGTTTCTGGGTTATATTTTAACGCCTATTTAAGAAACTAAAAATACCCAATTGCTTCAATTTTGATTTTTGGTTGTAGGTTTGCTGGTAGGAATCGTTGGTCTCAGATTGATTGTAGGAAGTGTTGCAGTGATCCTGGGCCTTTTCCATGTACATGTTGCTTGGACGTTTTACAATTGACAAATTCGACCAATTTTTATTGCTTTTGATTGTGGAATTTGCTGAAATTCAACACTACCAGGTTAGATACACCGCTTAAGGTAGCAATTTTGTTGACTTTGCCAGCTCTTGCTGCTATTTGGTTGGCTTTGAGCATACCAGGAAGTGTTATTGTGGGTGTGGATTATGAATTTTTCACTCCTTGGGTTTCAACTTACTTTTGCTTTATTTTTATTTATTTTATCTGGCATGTAGTAGTAATCACCAGTATATATGGTTAAATGGTTTGCATCCCATCTGCTGCTCTATGGAACCAAGTTGATTGCCTTGCGCACGTGTATTGGCTAAATGAATTCTTCTTAGAACAAATCATGCAGCTTTTTTAGTTGAATTTCTATTTTTAACTTGTTAATCTCAATTAAATATTTGTATGAGTTCACCAATATATCCATGGCTACTATTGCAAATAAATGAATAACAGTCCAACATTTTTTTATTTGGCCCCTCTATAAAGGTATTGGGAACACAATGTACTGAAGTCAAAACAAATTCTTTAAATAATATTTCAAATCTCTGTTTGAGACTTTGAATAATACTCCGTATTCACAATGTCTGAGATTGAGTTTTATCAAATTAGATTATAACGTCTTTAACATGACAAGCATTTATAATAATGCTAGAAAAATACGTGATACTTTTTAAGATCAACTAGAATGTTAATTTCACATAATAACTGAAATTCAACACTACCAGGTTAGATACACAGCTTAAGGTAACAATTTTGTTGGCTTTGCCAGCTCTTGCTGCTATTTGGTTGGCTCTGAGCATATCAGGAAGTGTTATTGTGGGTGTGGGTTATGAATTTTTCACTCCTTGGGTTTCAGCTTTTAAGCCCTTTAGACAAGAGAATGAATCCAATAAATTCTTACACTGCATTGTGATAATTTTCTGAAGTGGCATGTTTTTCTTTATATATTTTCCTTCCTTAGTTGATTTTGTTAAAACTGTTTTTCTCCAACAATTAGGATGGAACATGGGATACTGTCAAACGAAGTTGTGTTGTCCGGGATTTTGCAGATATTTGCATTCATTCATATCCAGTTTACTTAAAGGAGGTTCGTGAATCTACAAGCTCAAACGAGCTTCAGACTCTTAGGTGGGTATTACCGTATTACTTGTGATGATCAGAACCTAATCTGATTAACTTAAAATGAGGATAAACATCTAACTTCTTCAAATGTGTATTTAAGCCTTATTCTCTTCACCGCATTTGTTTTATTGTCCGTATAAAAGGACAGTTTGGAATTAGAAAGTAGTGGATTGCGTAGAGTTTTGTTGTGTAAAAGAAGACTAGAACCATGGTTCATTTGTGGTTGCTAAACAAGGGATTTCATATGCATGCTTTTGGTTTGTTAGATAGATATTCTAGCTAAGTTAACCTTGCTAATATGTTCTGGCTATCATGCAGATTTTTCCATGTACCAGCAATCATTGTTGTTGGTTTGATGGGCTTAATTGTTGACATTCCTTCTTTCACTGTCATTGCGATAAAAACAAGTCCTTTAATGTTACTAAAAGGATGGCAGCGACTAACACATGACCTTATTAGTCGCCAGGGCCCTTTTCTTGAAACAACTTGTATTCCAATTGTTGCTCGTCTCAAGCGCTCCGGCAAGGTTTTCCACTTTCTCTCTTTAATTGTCTTTTCGATTTCATGTTTTGTGATAATCTCTGTTGAGTTCTCATCTGTTTCAGTATAGATGATGACTCTAGTAAGAACTTCTAATTTGTTTATTAGACTGTTTGAGGTTTAGTGTAGTCTAAACTCTAAACAAACATTAAGCTTATCGTAATCTCCAGTCACGTAAAAACTTATCATAATCTCCAGCCGGGTAAAAATAATTAGTCCTAGATTAGTCCTAGAAGGATAATAATTAGAATTGGACTACAATTCTAATATTGGTATATTAGTCCTAGAGTGTAGGCTAGATTTGGATTCCTAAGTATTAGCAGTAGTATTAGATTACAATGCTACGTTATCCTAAGTCTAGAAGGAGTATAATTAGTCTTTAGCTTGTACTATATATATCTTGCTCATGATCATCAACATAATTCCAAGCTTTAAGCGTCAATAATGATCTTCTTAACTTACCAATGTCAATAATAATAAGCTTTAATGCAAAAAATTTTTAGGAAGCTTTATTTGCTTGTCCACTTTAGTAATTAACTTTGTTGAATCTATGGTTCCTTTCTGTTTCAATTCTGCATTTTTTTTTTAATATATGTTAATAAGAAATCTACCATGTCTGCTTGTAGCATGAAAAGGAATGGCAAACGAGAAAATCACATCAAGCGGCCAACGAGATCTTGGTGTTGAGGTGTAAGAATGTTGGTTTGCACTCAAATGCATCCGTCAATCGTTATTAGCTCTCAAAGTCTAATGAAAAACTAGTTTTAGAGTACCAAATTCATTTACTTTCTTGTAAAATGGTATTGAAAATTTAAAGTCGTGTACCAAATAACTTGATTTAGTTCATTTACCATCTTGTAAAATGGAATTGAAAATTTAGAGTCAATTACCAAATTTATTTACTATGTTGTAAAATGGTATTGGAAATGGTACTGAAAATTTACCGTCGAGTACCAAAT

mRNA sequence

AGCGCCAAACTAAAAACTAGAGAGAGAAAGAAATTTTCATTTTGCGCCATCAAATAAATCACCCAAAATTTGAGTGCCATAACCAAATCAGTGAATTTGAGCCCTCATAACCCAAAAATTTCAAGAAAAATCAAAACCCTCCATCGTTTTCTCTTTCCTCCATCGTTCTCTCTCTTCAGAACCAGAACAAACTTCTCTGATTCAACATCAACAATGGAGGGTGAGAAAAACTTGAATTTCCGACAAGGTTTGCTGGTAGGAATCGTTGGTCTCAGATTGATTGTAGGAAGTGTTGCAGTGATCCTGGGCCTTTTCCATGTACATGTTGCTTGGACGTTTTACAATTGACAAATTCGACCAATTTTTATTGCTTTTGATTGTGGAATTTGCTGAAATTCAACACTACCAGGATGGAACATGGGATACTGTCAAACGAAGTTGTGTTGTCCGGGATTTTGCAGATATTTGCATTCATTCATATCCAGTTTACTTAAAGGAGGTTCGTGAATCTACAAGCTCAAACGAGCTTCAGACTCTTAGATTTTTCCATGTACCAGCAATCATTGTTGTTGGTTTGATGGGCTTAATTGTTGACATTCCTTCTTTCACTGTCATTGCGATAAAAACAAGTCCTTTAATGTTACTAAAAGGATGGCAGCGACTAACACATGACCTTATTAGTCGCCAGGGCCCTTTTCTTGAAACAACTTGTATTCCAATTGTTGCTCGTCTCAAGCGCTCCGGCAAGCATGAAAAGGAATGGCAAACGAGAAAATCACATCAAGCGGCCAACGAGATCTTGGTGTTGAGGTGTAAGAATGTTGGTTTGCACTCAAATGCATCCGTCAATCGTTATTAGCTCTCAAAGTCTAATGAAAAACTAGTTTTAGAGTACCAAATTCATTTACTTTCTTGTAAAATGGTATTGAAAATTTAAAGTCGTGTACCAAATAACTTGATTTAGTTCATTTACCATCTTGTAAAATGGAATTGAAAATTTAGAGTCAATTACCAAATTTATTTACTATGTTGTAAAATGGTATTGGAAATGGTACTGAAAATTTACCGTCGAGTACCAAAT

Coding sequence (CDS)

ATGTACATGTTGCTTGGACGTTTTACAATTGACAAATTCGACCAATTTTTATTGCTTTTGATTGTGGAATTTGCTGAAATTCAACACTACCAGGATGGAACATGGGATACTGTCAAACGAAGTTGTGTTGTCCGGGATTTTGCAGATATTTGCATTCATTCATATCCAGTTTACTTAAAGGAGGTTCGTGAATCTACAAGCTCAAACGAGCTTCAGACTCTTAGATTTTTCCATGTACCAGCAATCATTGTTGTTGGTTTGATGGGCTTAATTGTTGACATTCCTTCTTTCACTGTCATTGCGATAAAAACAAGTCCTTTAATGTTACTAAAAGGATGGCAGCGACTAACACATGACCTTATTAGTCGCCAGGGCCCTTTTCTTGAAACAACTTGTATTCCAATTGTTGCTCGTCTCAAGCGCTCCGGCAAGCATGAAAAGGAATGGCAAACGAGAAAATCACATCAAGCGGCCAACGAGATCTTGGTGTTGAGGTGTAAGAATGTTGGTTTGCACTCAAATGCATCCGTCAATCGTTATTAG

Protein sequence

MYMLLGRFTIDKFDQFLLLLIVEFAEIQHYQDGTWDTVKRSCVVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGLIVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPIVARLKRSGKHEKEWQTRKSHQAANEILVLRCKNVGLHSNASVNRY
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo16533.1Spo16533.1mRNA


Homology
[Close]
BLAST of Spo16533.1 vs. NCBI nr
Match: gi|902114293|gb|KNA03843.1| (hypothetical protein SOVF_205270 isoform B, partial [Spinacia oleracea])

HSP 1 Score: 190.3 bits (482), Expect = 3.000e-45
Identity = 94/105 (89.52%), Postives = 97/105 (92.38%), Query Frame = 1 

		  

Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTWDT+K SC VVRDFADICIHSYPVYLKEVREST S+ELQTLRF HVPAIIVVGLMGL
Sbjct: 121 DGTWDTIKGSCTVVRDFADICIHSYPVYLKEVRESTGSDELQTLRFIHVPAIIVVGLMGL 180

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           IVD+PSFTVIAI  SPLMLLKGWQRLT DLISRQGPFLET CIPI
Sbjct: 181 IVDVPSFTVIAIIKSPLMLLKGWQRLTQDLISRQGPFLETACIPI 225
[Close]
BLAST of Spo16533.1 vs. NCBI nr
Match: gi|902114292|gb|KNA03842.1| (hypothetical protein SOVF_205270 isoform A, partial [Spinacia oleracea])

HSP 1 Score: 190.3 bits (482), Expect = 3.000e-45
Identity = 94/105 (89.52%), Postives = 97/105 (92.38%), Query Frame = 1 

		  

Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTWDT+K SC VVRDFADICIHSYPVYLKEVREST S+ELQTLRF HVPAIIVVGLMGL
Sbjct: 116 DGTWDTIKGSCTVVRDFADICIHSYPVYLKEVRESTGSDELQTLRFIHVPAIIVVGLMGL 175

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           IVD+PSFTVIAI  SPLMLLKGWQRLT DLISRQGPFLET CIPI
Sbjct: 176 IVDVPSFTVIAIIKSPLMLLKGWQRLTQDLISRQGPFLETACIPI 220
[Close]
BLAST of Spo16533.1 vs. NCBI nr
Match: gi|731373395|ref|XP_010666634.1| (PREDICTED: uncharacterized membrane protein At3g27390 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 184.9 bits (468), Expect = 1.300e-43
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 1 

		  

Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTWDTVK SC VVRDFADICIHSYPVYL E+RES++S+ELQTLRF H+PAII+VGLMGL
Sbjct: 137 DGTWDTVKGSCTVVRDFADICIHSYPVYLTEIRESSNSDELQTLRFIHIPAIIIVGLMGL 196

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           I+D+PSF  IAI  SPLMLLKGWQRLTHDLISRQGPFLET CIPI
Sbjct: 197 IIDVPSFIAIAIIKSPLMLLKGWQRLTHDLISRQGPFLETACIPI 241
[Close]
BLAST of Spo16533.1 vs. NCBI nr
Match: gi|747102011|ref|XP_011099151.1| (PREDICTED: uncharacterized membrane protein At3g27390 [Sesamum indicum])

HSP 1 Score: 165.6 bits (418), Expect = 7.900e-38
Identity = 77/105 (73.33%), Postives = 88/105 (83.81%), Query Frame = 1 

		  

Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTW T+K SC VVRDFAD+C HSYP+YLKE+RE+ SSNELQ LRF HVPA I+VGL+GL
Sbjct: 131 DGTWGTIKGSCTVVRDFADLCYHSYPIYLKELRENPSSNELQPLRFIHVPACIIVGLIGL 190

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           +V+IP +T IAI  SP ML KGW RL HDLISR+GPFLET CIPI
Sbjct: 191 VVEIPLYTAIAIVKSPFMLFKGWHRLLHDLISREGPFLETACIPI 235
[Close]
BLAST of Spo16533.1 vs. NCBI nr
Match: gi|703091492|ref|XP_010094373.1| (hypothetical protein L484_008261 [Morus notabilis])

HSP 1 Score: 164.5 bits (415), Expect = 1.800e-37
Identity = 79/105 (75.24%), Postives = 87/105 (82.86%), Query Frame = 1 

		  

Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTW T+K SC VVRDFAD+C HSYPVYLKE+RES  SNE+QTLR  HVPA I+VGLMGL
Sbjct: 133 DGTWGTIKGSCTVVRDFADLCHHSYPVYLKELRESPDSNEVQTLRLIHVPACIIVGLMGL 192

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           IV+IP +T IAI  SP ML KGW RL HDLISR+GPFLET CIPI
Sbjct: 193 IVEIPLYTTIAIVKSPYMLFKGWFRLVHDLISREGPFLETACIPI 237
[Close]
BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QAW9_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_205270 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.100e-45
Identity = 94/105 (89.52%), Postives = 97/105 (92.38%), Query Frame = 1 

		  

Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTWDT+K SC VVRDFADICIHSYPVYLKEVREST S+ELQTLRF HVPAIIVVGLMGL
Sbjct: 121 DGTWDTIKGSCTVVRDFADICIHSYPVYLKEVRESTGSDELQTLRFIHVPAIIVVGLMGL 180

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           IVD+PSFTVIAI  SPLMLLKGWQRLT DLISRQGPFLET CIPI
Sbjct: 181 IVDVPSFTVIAIIKSPLMLLKGWQRLTQDLISRQGPFLETACIPI 225
[Close]
BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q979_SPIOL (Uncharacterized protein (Fragment) OS=Spinacia oleracea GN=SOVF_205270 PE=4 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 2.100e-45
Identity = 94/105 (89.52%), Postives = 97/105 (92.38%), Query Frame = 1 

		  

Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTWDT+K SC VVRDFADICIHSYPVYLKEVREST S+ELQTLRF HVPAIIVVGLMGL
Sbjct: 116 DGTWDTIKGSCTVVRDFADICIHSYPVYLKEVRESTGSDELQTLRFIHVPAIIVVGLMGL 175

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           IVD+PSFTVIAI  SPLMLLKGWQRLT DLISRQGPFLET CIPI
Sbjct: 176 IVDVPSFTVIAIIKSPLMLLKGWQRLTQDLISRQGPFLETACIPI 220
[Close]
BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B4U3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_003450 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 8.700e-44
Identity = 88/105 (83.81%), Postives = 96/105 (91.43%), Query Frame = 1 

		  

Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTWDTVK SC VVRDFADICIHSYPVYL E+RES++S+ELQTLRF H+PAII+VGLMGL
Sbjct: 137 DGTWDTVKGSCTVVRDFADICIHSYPVYLTEIRESSNSDELQTLRFIHIPAIIIVGLMGL 196

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           I+D+PSF  IAI  SPLMLLKGWQRLTHDLISRQGPFLET CIPI
Sbjct: 197 IIDVPSFIAIAIIKSPLMLLKGWQRLTHDLISRQGPFLETACIPI 241
[Close]
BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
Match: W9QW47_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008261 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.200e-37
Identity = 79/105 (75.24%), Postives = 87/105 (82.86%), Query Frame = 1 

		  

Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTW T+K SC VVRDFAD+C HSYPVYLKE+RES  SNE+QTLR  HVPA I+VGLMGL
Sbjct: 133 DGTWGTIKGSCTVVRDFADLCHHSYPVYLKELRESPDSNEVQTLRLIHVPACIIVGLMGL 192

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           IV+IP +T IAI  SP ML KGW RL HDLISR+GPFLET CIPI
Sbjct: 193 IVEIPLYTTIAIVKSPYMLFKGWFRLVHDLISREGPFLETACIPI 237
[Close]
BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
Match: W1NMM4_AMBTC (Uncharacterized protein OS=Amborella trichopoda GN=AMTR_s00126p00089850 PE=4 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.600e-37
Identity = 76/115 (66.09%), Postives = 90/115 (78.26%), Query Frame = 1 

		  

Query: 23  EFAEIQH-YQDGTWDTVKRSCVV-RDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVP 82
           EF +  H   DGTWDT+K SCVV RDFADIC HSYP+YLKE  E T+S+E QT+R   VP
Sbjct: 127 EFTKFSHCVVDGTWDTIKGSCVVVRDFADICYHSYPLYLKETSERTTSDEPQTIRLMEVP 186

Query: 83  AIIVVGLMGLIVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
             I++GLMGLIV+IP FT+IA+  SP ML KGWQRL HDL+SR+GPFLET C+PI
Sbjct: 187 KCIIIGLMGLIVEIPLFTIIAVTKSPFMLFKGWQRLLHDLVSREGPFLETACVPI 241
[Close]
BLAST of Spo16533.1 vs. ExPASy Swiss-Prot
Match: Y3739_ARATH (Uncharacterized membrane protein At3g27390 OS=Arabidopsis thaliana GN=At3g27390 PE=1 SV=2)

HSP 1 Score: 116.3 bits (290), Expect = 3.400e-25
Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = 1 

		  

Query: 30  YQDGTWDTVKRS-CVVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLM 89
           + DGTW T++RS  VVRDF D+C HSY   + E+++S    +   +R   +P  +VV ++
Sbjct: 131 FYDGTWSTMQRSFTVVRDFKDVCFHSYFSLMDELKQSCPDRKYYEIRLLQLPGALVVSVL 190

Query: 90  GLIVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           G++VD P  +++AI  SP ML KGW RL HDLI R+GPFLET C+PI
Sbjct: 191 GILVDPPVISLVAICKSPYMLFKGWHRLFHDLIGREGPFLETMCVPI 237
[Close]
BLAST of Spo16533.1 vs. TAIR (Arabidopsis)
Match: AT4G37030.1 (unknown protein)

HSP 1 Score: 149.4 bits (376), Expect = 2.100e-36
Identity = 68/105 (64.76%), Postives = 82/105 (78.10%), Query Frame = 1 

		  

Query: 32  DGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLMGL 91
           DGTW T+K SC VV DFAD C HSYP+YLKE+RES  S+ELQTLR  HVP  I+VG++GL
Sbjct: 134 DGTWGTIKGSCIVVTDFADFCYHSYPLYLKELRESPVSDELQTLRLIHVPGCIIVGILGL 193

Query: 92  IVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           ++DIP FT IA+  SP +LLKGW RL  D I+R+GPFLE  CIP+
Sbjct: 194 VIDIPLFTAIAVIKSPYLLLKGWYRLAQDAINREGPFLEIACIPV 238
[Close]
BLAST of Spo16533.1 vs. TAIR (Arabidopsis)
Match: AT3G27390.1 (unknown protein)

HSP 1 Score: 116.3 bits (290), Expect = 1.900e-26
Identity = 52/107 (48.60%), Postives = 73/107 (68.22%), Query Frame = 1 

		  

Query: 30  YQDGTWDTVKRS-CVVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLM 89
           + DGTW T++RS  VVRDF D+C HSY   + E+++S    +   +R   +P  +VV ++
Sbjct: 131 FYDGTWSTMQRSFTVVRDFKDVCFHSYFSLMDELKQSCPDRKYYEIRLLQLPGALVVSVL 190

Query: 90  GLIVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           G++VD P  +++AI  SP ML KGW RL HDLI R+GPFLET C+PI
Sbjct: 191 GILVDPPVISLVAICKSPYMLFKGWHRLFHDLIGREGPFLETMCVPI 237
[Close]
BLAST of Spo16533.1 vs. TAIR (Arabidopsis)
Match: AT5G40640.1 (unknown protein)

HSP 1 Score: 115.9 bits (289), Expect = 2.500e-26
Identity = 50/107 (46.73%), Postives = 73/107 (68.22%), Query Frame = 1 

		  

Query: 30  YQDGTWDTVKRS-CVVRDFADICIHSYPVYLKEVRESTSSNELQTLRFFHVPAIIVVGLM 89
           + DGTW TV+ S  VV DF D+C HSY  ++ ++R ST++     +R   +P  ++V ++
Sbjct: 131 FYDGTWSTVQGSFTVVCDFKDVCFHSYFSFMDDLRTSTANRHYYEIRLLQIPGAVIVAVL 190

Query: 90  GLIVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIPI 136
           G++VD P  +++A+  SP ML KGW RL HDLI R+GPFLET C+PI
Sbjct: 191 GILVDFPVISLLALCKSPYMLFKGWHRLFHDLIGREGPFLETMCVPI 237
[Close]
BLAST of Spo16533.1 vs. TAIR (Arabidopsis)
Match: AT4G12680.1 (unknown protein)

HSP 1 Score: 104.8 bits (260), Expect = 5.800e-23
Identity = 48/107 (44.86%), Postives = 73/107 (68.22%), Query Frame = 1 

		  

Query: 30  YQDGTWDTVKRSC-VVRDFADICIHSYPVYLKEVRESTSSN-ELQTLRFFHVPAIIVVGL 89
           + DG++ T+K SC VV DF D C HSY  Y+ E+RE  S++ E   ++   +P+ ++  L
Sbjct: 131 FVDGSFSTIKGSCTVVTDFTDFCFHSYFSYMDELREMVSADVEPLEIKLSRLPSCLLASL 190

Query: 90  MGLIVDIPSFTVIAIKTSPLMLLKGWQRLTHDLISRQGPFLETTCIP 135
           +G++VD+   T +A+  SP MLLKGW+RL  DL+ R+GPFLE+ C+P
Sbjct: 191 IGVMVDVLLITAVAVYKSPYMLLKGWKRLLEDLVGREGPFLESVCVP 237
The following BLAST results are available for this feature:
BLAST of Spo16533.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902114293|gb|KNA03843.1|3.0e-4589.5hypothetical protein SOVF_2052... [more]
gi|902114292|gb|KNA03842.1|3.0e-4589.5hypothetical protein SOVF_2052... [more]
gi|731373395|ref|XP_010666634.1|1.3e-4383.8PREDICTED: uncharacterized mem... [more]
gi|747102011|ref|XP_011099151.1|7.9e-3873.3PREDICTED: uncharacterized mem... [more]
gi|703091492|ref|XP_010094373.1|1.8e-3775.2hypothetical protein L484_0082... [more]
back to top
BLAST of Spo16533.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QAW9_SPIOL2.1e-4589.5Uncharacterized protein (Fragm... [more]
A0A0K9Q979_SPIOL2.1e-4589.5Uncharacterized protein (Fragm... [more]
A0A0J8B4U3_BETVU8.7e-4483.8Uncharacterized protein OS=Bet... [more]
W9QW47_9ROSA1.2e-3775.2Uncharacterized protein OS=Mor... [more]
W1NMM4_AMBTC3.6e-3766.0Uncharacterized protein OS=Amb... [more]
back to top
BLAST of Spo16533.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y3739_ARATH3.4e-2548.6Uncharacterized membrane prote... [more]
back to top
BLAST of Spo16533.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 4
Match NameE-valueIdentityDescription
AT4G37030.12.1e-3664.7unknown protein[more]
AT3G27390.11.9e-2648.6unknown protein[more]
AT5G40640.12.5e-2646.7unknown protein[more]
AT4G12680.15.8e-2344.8unknown protein[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31133FAMILY NOT NAMEDcoord: 32..135
score: 2.5
NoneNo IPR availablePANTHERPTHR31133:SF4SUBFAMILY NOT NAMEDcoord: 32..135
score: 2.5

RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo171000.72Barchart | Table