Homology
BLAST of Spo11977.1 vs. NCBI nr
Match:
gi|902234962|gb|KNA23664.1| (hypothetical protein SOVF_022900 [Spinacia oleracea])
HSP 1 Score: 440.7 bits (1132), Expect = 1.600e-120
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 1
Query: 1 MATRVISQIRKLPLVNALRQASQPSATPGSYSSRWIMPSTSVGPTLKKTSGLTPAMGSLF 60 MATRVISQIRKLPLVNALRQASQPSATPGSYSSRW MPSTSVGPTLKKTSGLTPAMGSLF Sbjct: 1 MATRVISQIRKLPLVNALRQASQPSATPGSYSSRWTMPSTSVGPTLKKTSGLTPAMGSLF 60 Query: 61 RNSGLGSVTAHPRSGFSASIPSMSVSVRYNSTSGIYANVRKRFTKERRNRGEIKGVSDNV 120 RNSGLGSVTAHPRSGFSASIPSMSVSVRYNSTSGIYANVRKRFTKERRNRGEIKGVSDNV Sbjct: 61 RNSGLGSVTAHPRSGFSASIPSMSVSVRYNSTSGIYANVRKRFTKERRNRGEIKGVSDNV 120 Query: 121 LSFGKYALQALEPAWITSKQITAGQLAIKRNMRGGKLFMRIFPHKPISLRPAETRMGRGK 180 LSFGKYALQALEPAWITSKQITAGQLAIKRNMRGGKLFMRIFPHKPISLRPAETRMGRGK Sbjct: 121 LSFGKYALQALEPAWITSKQITAGQLAIKRNMRGGKLFMRIFPHKPISLRPAETRMGRGK 180 Query: 181 GNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASKFPLRTRFVKC 228 GNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASKFPLRTRFVKC Sbjct: 181 GNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASKFPLRTRFVKC 227
BLAST of Spo11977.1 vs. NCBI nr
Match:
gi|870863527|gb|KMT14691.1| (hypothetical protein BVRB_4g074590 [Beta vulgaris subsp. vulgaris])
HSP 1 Score: 330.1 bits (845), Expect = 3.000e-87
Identity = 176/243 (72.43%), Postives = 199/243 (81.89%), Query Frame = 1
Query: 1 MATRVISQIRKLPLVNALRQASQPSATP-------------GSYSSRWIMPSTSVGPTLK 60 MATRV+S IR L+N LRQAS S + GSY S W M P+L+ Sbjct: 1 MATRVLSHIRNSRLINTLRQASLSSCSSNPVKNAQLSPTSMGSYISGWTMT-----PSLR 60 Query: 61 KTSGLTPAMGSLFRN----SGLGSVTAHPRSGFSASIPSMSVSVRYNSTSGIYANVRKRF 120 KTS ++PAMG +RN GLGSVTA PRSGFS S+P +S+SVRYNSTSG+YANVRKRF Sbjct: 61 KTSDISPAMGFPWRNLGCSPGLGSVTAKPRSGFSLSVPRLSISVRYNSTSGVYANVRKRF 120 Query: 121 TKERRNRGEIKGVSDNVLSFGKYALQALEPAWITSKQITAGQLAIKRNMRGGKLFMRIFP 180 +K+RR+RGE+KGVSDNVLSFGK+ALQALEPAWITS+QITAGQLAIKRNMRGGKLFMRIFP Sbjct: 121 SKQRRSRGEMKGVSDNVLSFGKFALQALEPAWITSRQITAGQLAIKRNMRGGKLFMRIFP 180 Query: 181 HKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASKFPLRTR 227 HKPI+LRPAETRMGRGKGNI+ WVAGV+ GR+IYEINGVPESVARKAITVAASKFPLRT+ Sbjct: 181 HKPITLRPAETRMGRGKGNISHWVAGVRAGRIIYEINGVPESVARKAITVAASKFPLRTK 238
BLAST of Spo11977.1 vs. NCBI nr
Match:
gi|153012176|ref|YP_001381692.1| (ribosomal protein L16 [Medicago truncatula])
HSP 1 Score: 164.9 bits (416), Expect = 1.700e-37
Identity = 78/131 (59.54%), Postives = 104/131 (79.39%), Query Frame = 1
Query: 96 YANVRKRFTKERRNRGEIKGVSDNVLSFGKYALQALEPAWITSKQITAGQLAIKRNMR-G 155 Y R RF K+ R R + K N +SFGKYALQALEPAWITS+QI AG+ A+ RN+R G Sbjct: 6 YNPKRTRFRKQHRGRMKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRG 65 Query: 156 GKLFMRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVA 215 GK+++RIFP KP+++RP ETRMG GKG+ +WVA VK G+++YE+ GVPE++ARKAI++A Sbjct: 66 GKIWVRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIA 125 Query: 216 ASKFPLRTRFV 226 ASK P+RT+F+ Sbjct: 126 ASKMPIRTQFI 136
BLAST of Spo11977.1 vs. NCBI nr
Match:
gi|827045307|ref|YP_009141646.1| (ribosomal protein L16 (chloroplast) [Medicago hybrida])
HSP 1 Score: 164.5 bits (415), Expect = 2.200e-37
Identity = 77/127 (60.63%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 100 RKRFTKERRNRGEIKGVSDNVLSFGKYALQALEPAWITSKQITAGQLAIKRNMR-GGKLF 159 R RF K+ R R + K N +SFGKYALQALEPAWITS+QI AG+ A+ RN+R GGK++ Sbjct: 6 RTRFRKQHRGRMKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIW 65 Query: 160 MRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASKF 219 +RIFP KP+++RP ETRMG GKG+ +WVA VK G+++YE+ GVPE++ARKAI++AASK Sbjct: 66 VRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKM 125 Query: 220 PLRTRFV 226 P+RT+F+ Sbjct: 126 PIRTQFI 132
BLAST of Spo11977.1 vs. NCBI nr
Match:
gi|937634520|gb|ALI90840.1| (Rpl16, partial (chloroplast) [Desmostachys planchoniana])
HSP 1 Score: 163.3 bits (412), Expect = 4.900e-37
Identity = 78/128 (60.94%), Postives = 106/128 (82.81%), Query Frame = 1
Query: 101 KRFTKERRNRGEIKGVS--DNVLSFGKYALQALEPAWITSKQITAGQLAIKRNMR-GGKL 160 KR +++RG +KG+S N + FGKYALQALEPAWITS+QI AG+ A+ RN R GGK+ Sbjct: 1 KRIRFRKQHRGRMKGISYRGNHICFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGKI 60 Query: 161 FMRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASK 220 ++RIFP KP+++RPAETRMG GKG+ +WVA VK GR++YE++GVPE++ARKAI++AASK Sbjct: 61 WVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEMSGVPENIARKAISIAASK 120 Query: 221 FPLRTRFV 226 P+RT+F+ Sbjct: 121 MPIRTQFI 128
BLAST of Spo11977.1 vs. UniProtKB/TrEMBL
Match:
A0A0K9RXM5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_022900 PE=3 SV=1)
HSP 1 Score: 440.7 bits (1132), Expect = 1.100e-120
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 1
Query: 1 MATRVISQIRKLPLVNALRQASQPSATPGSYSSRWIMPSTSVGPTLKKTSGLTPAMGSLF 60 MATRVISQIRKLPLVNALRQASQPSATPGSYSSRW MPSTSVGPTLKKTSGLTPAMGSLF Sbjct: 1 MATRVISQIRKLPLVNALRQASQPSATPGSYSSRWTMPSTSVGPTLKKTSGLTPAMGSLF 60 Query: 61 RNSGLGSVTAHPRSGFSASIPSMSVSVRYNSTSGIYANVRKRFTKERRNRGEIKGVSDNV 120 RNSGLGSVTAHPRSGFSASIPSMSVSVRYNSTSGIYANVRKRFTKERRNRGEIKGVSDNV Sbjct: 61 RNSGLGSVTAHPRSGFSASIPSMSVSVRYNSTSGIYANVRKRFTKERRNRGEIKGVSDNV 120 Query: 121 LSFGKYALQALEPAWITSKQITAGQLAIKRNMRGGKLFMRIFPHKPISLRPAETRMGRGK 180 LSFGKYALQALEPAWITSKQITAGQLAIKRNMRGGKLFMRIFPHKPISLRPAETRMGRGK Sbjct: 121 LSFGKYALQALEPAWITSKQITAGQLAIKRNMRGGKLFMRIFPHKPISLRPAETRMGRGK 180 Query: 181 GNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASKFPLRTRFVKC 228 GNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASKFPLRTRFVKC Sbjct: 181 GNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASKFPLRTRFVKC 227
BLAST of Spo11977.1 vs. UniProtKB/TrEMBL
Match:
A0A0J8FFT9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g074590 PE=3 SV=1)
HSP 1 Score: 330.1 bits (845), Expect = 2.100e-87
Identity = 176/243 (72.43%), Postives = 199/243 (81.89%), Query Frame = 1
Query: 1 MATRVISQIRKLPLVNALRQASQPSATP-------------GSYSSRWIMPSTSVGPTLK 60 MATRV+S IR L+N LRQAS S + GSY S W M P+L+ Sbjct: 1 MATRVLSHIRNSRLINTLRQASLSSCSSNPVKNAQLSPTSMGSYISGWTMT-----PSLR 60 Query: 61 KTSGLTPAMGSLFRN----SGLGSVTAHPRSGFSASIPSMSVSVRYNSTSGIYANVRKRF 120 KTS ++PAMG +RN GLGSVTA PRSGFS S+P +S+SVRYNSTSG+YANVRKRF Sbjct: 61 KTSDISPAMGFPWRNLGCSPGLGSVTAKPRSGFSLSVPRLSISVRYNSTSGVYANVRKRF 120 Query: 121 TKERRNRGEIKGVSDNVLSFGKYALQALEPAWITSKQITAGQLAIKRNMRGGKLFMRIFP 180 +K+RR+RGE+KGVSDNVLSFGK+ALQALEPAWITS+QITAGQLAIKRNMRGGKLFMRIFP Sbjct: 121 SKQRRSRGEMKGVSDNVLSFGKFALQALEPAWITSRQITAGQLAIKRNMRGGKLFMRIFP 180 Query: 181 HKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASKFPLRTR 227 HKPI+LRPAETRMGRGKGNI+ WVAGV+ GR+IYEINGVPESVARKAITVAASKFPLRT+ Sbjct: 181 HKPITLRPAETRMGRGKGNISHWVAGVRAGRIIYEINGVPESVARKAITVAASKFPLRTK 238
BLAST of Spo11977.1 vs. UniProtKB/TrEMBL
Match:
A0A0F6NLP2_9FABA (50S ribosomal protein L16, chloroplastic OS=Medicago hybrida GN=rpl16 PE=3 SV=1)
HSP 1 Score: 164.5 bits (415), Expect = 1.500e-37
Identity = 77/127 (60.63%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 100 RKRFTKERRNRGEIKGVSDNVLSFGKYALQALEPAWITSKQITAGQLAIKRNMR-GGKLF 159 R RF K+ R R + K N +SFGKYALQALEPAWITS+QI AG+ A+ RN+R GGK++ Sbjct: 6 RTRFRKQHRGRMKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIW 65 Query: 160 MRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASKF 219 +RIFP KP+++RP ETRMG GKG+ +WVA VK G+++YE+ GVPE++ARKAI++AASK Sbjct: 66 VRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKM 125 Query: 220 PLRTRFV 226 P+RT+F+ Sbjct: 126 PIRTQFI 132
BLAST of Spo11977.1 vs. UniProtKB/TrEMBL
Match:
A0A0F6NLX6_9FABA (50S ribosomal protein L16, chloroplastic OS=Medicago papillosa GN=rpl16 PE=3 SV=1)
HSP 1 Score: 164.5 bits (415), Expect = 1.500e-37
Identity = 77/127 (60.63%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 100 RKRFTKERRNRGEIKGVSDNVLSFGKYALQALEPAWITSKQITAGQLAIKRNMR-GGKLF 159 R RF K+ R R + K N +SFGKYALQALEPAWITS+QI AG+ A+ RN+R GGK++ Sbjct: 6 RTRFRKQHRGRMKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIW 65 Query: 160 MRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASKF 219 +RIFP KP+++RP ETRMG GKG+ +WVA VK G+++YE+ GVPE++ARKAI++AASK Sbjct: 66 VRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKM 125 Query: 220 PLRTRFV 226 P+RT+F+ Sbjct: 126 PIRTQFI 132
BLAST of Spo11977.1 vs. UniProtKB/TrEMBL
Match:
S4SZ13_MEDTR (Ribosomal protein L16 OS=Medicago truncatula GN=rpl16 PE=3 SV=1)
HSP 1 Score: 164.5 bits (415), Expect = 1.500e-37
Identity = 77/127 (60.63%), Postives = 103/127 (81.10%), Query Frame = 1
Query: 100 RKRFTKERRNRGEIKGVSDNVLSFGKYALQALEPAWITSKQITAGQLAIKRNMR-GGKLF 159 R RF K+ R R + K N +SFGKYALQALEPAWITS+QI AG+ A+ RN+R GGK++ Sbjct: 6 RTRFRKQHRGRMKGKAYRGNTISFGKYALQALEPAWITSRQIEAGRRAMSRNVRRGGKIW 65 Query: 160 MRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAASKF 219 +RIFP KP+++RP ETRMG GKG+ +WVA VK G+++YE+ GVPE++ARKAI++AASK Sbjct: 66 VRIFPDKPVTVRPTETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAASKM 125 Query: 220 PLRTRFV 226 P+RT+F+ Sbjct: 126 PIRTQFI 132
BLAST of Spo11977.1 vs. ExPASy Swiss-Prot
Match:
RK16_FAGEA (50S ribosomal protein L16, chloroplastic OS=Fagopyrum esculentum subsp. ancestrale GN=rpl16 PE=3 SV=1)
HSP 1 Score: 162.5 bits (410), Expect = 5.300e-39
Identity = 81/129 (62.79%), Postives = 106/129 (82.17%), Query Frame = 1
Query: 100 RKRFTKERRNRGEIKGVS--DNVLSFGKYALQALEPAWITSKQITAGQLAIKRNMR-GGK 159 R RF K+ +RG +KG+S N + FG+YALQALEPAWITS+QI AG+ A+ RN R GGK Sbjct: 6 RTRFRKQ--HRGRMKGISYRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRNARRGGK 65 Query: 160 LFMRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAAS 219 L++RIFP KP+++RPAETRMG GKG+ +WVA VK GR++YEI+GVPE +ARKAI++AAS Sbjct: 66 LWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGRILYEISGVPEKIARKAISIAAS 125 Query: 220 KFPLRTRFV 226 K P+RT+F+ Sbjct: 126 KMPIRTQFL 132
BLAST of Spo11977.1 vs. ExPASy Swiss-Prot
Match:
RK16_POPTR (50S ribosomal protein L16, chloroplastic OS=Populus trichocarpa GN=rpl16 PE=3 SV=1)
HSP 1 Score: 161.8 bits (408), Expect = 9.000e-39
Identity = 80/129 (62.02%), Postives = 106/129 (82.17%), Query Frame = 1
Query: 100 RKRFTKERRNRGEIKGVSD--NVLSFGKYALQALEPAWITSKQITAGQLAIKRNMR-GGK 159 R RF K+ +RG +KG+S N + FG+YALQALEPAWITS+QI AG+ A+ RN+R GGK Sbjct: 6 RTRFRKQ--HRGRMKGISSRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRNVRRGGK 65 Query: 160 LFMRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAAS 219 +++RIFP KP++LRP+ETRMG GKG+ +WVA VK GRMIYE+ GV E++ARKAI++AAS Sbjct: 66 IWVRIFPDKPVTLRPSETRMGSGKGSPEYWVAVVKPGRMIYEMGGVAENIARKAISIAAS 125 Query: 220 KFPLRTRFV 226 K P+RT+F+ Sbjct: 126 KMPIRTQFI 132
BLAST of Spo11977.1 vs. ExPASy Swiss-Prot
Match:
RK16_SOLBU (50S ribosomal protein L16, chloroplastic OS=Solanum bulbocastanum GN=rpl16 PE=3 SV=1)
HSP 1 Score: 161.0 bits (406), Expect = 1.500e-38
Identity = 80/129 (62.02%), Postives = 106/129 (82.17%), Query Frame = 1
Query: 100 RKRFTKERRNRGEIKGVSD--NVLSFGKYALQALEPAWITSKQITAGQLAIKRNMR-GGK 159 R RF K+ +RG +KG+S N +SFGKYALQALEPAWITS+QI AG+ A+ RN R GGK Sbjct: 6 RTRFRKQ--HRGRMKGISSRGNRISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGK 65 Query: 160 LFMRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAAS 219 +++RIFP KP++LRPAETRMG GKG+ +WVA VK GR++YE+ GV E++AR+AI++AAS Sbjct: 66 IWVRIFPDKPVTLRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISLAAS 125 Query: 220 KFPLRTRFV 226 K P+RT+F+ Sbjct: 126 KMPIRTQFI 132
BLAST of Spo11977.1 vs. ExPASy Swiss-Prot
Match:
RK16_SOLLC (50S ribosomal protein L16, chloroplastic OS=Solanum lycopersicum GN=rpl16 PE=3 SV=1)
HSP 1 Score: 160.6 bits (405), Expect = 2.000e-38
Identity = 80/129 (62.02%), Postives = 106/129 (82.17%), Query Frame = 1
Query: 100 RKRFTKERRNRGEIKGVS--DNVLSFGKYALQALEPAWITSKQITAGQLAIKRNMR-GGK 159 R RF K+ +RG +KG+S N +SFGKYALQALEPAWITS+QI AG+ A+ RN R GGK Sbjct: 6 RTRFRKQ--HRGRMKGISYRGNRISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGK 65 Query: 160 LFMRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAAS 219 +++RIFP KP++LRPAETRMG GKG+ +WVA VK GR++YE+ GV E++AR+AI++AAS Sbjct: 66 IWVRIFPDKPVTLRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISLAAS 125 Query: 220 KFPLRTRFV 226 K P+RT+F+ Sbjct: 126 KMPIRTQFI 132
BLAST of Spo11977.1 vs. ExPASy Swiss-Prot
Match:
RK16_ATRBE (50S ribosomal protein L16, chloroplastic OS=Atropa belladonna GN=rpl16 PE=3 SV=1)
HSP 1 Score: 160.6 bits (405), Expect = 2.000e-38
Identity = 80/129 (62.02%), Postives = 106/129 (82.17%), Query Frame = 1
Query: 100 RKRFTKERRNRGEIKGVS--DNVLSFGKYALQALEPAWITSKQITAGQLAIKRNMR-GGK 159 R RF K+ +RG +KG+S N +SFGKYALQALEPAWITS+QI AG+ A+ RN R GGK Sbjct: 6 RTRFRKQ--HRGRMKGISYRGNHISFGKYALQALEPAWITSRQIEAGRRAMTRNARRGGK 65 Query: 160 LFMRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAAS 219 +++RIFP KP++LRPAETRMG GKG+ +WVA VK GR++YE+ GV E++AR+AI++AAS Sbjct: 66 IWVRIFPDKPVTLRPAETRMGSGKGSPEYWVAVVKPGRILYEMGGVTENIARRAISLAAS 125 Query: 220 KFPLRTRFV 226 K P+RT+F+ Sbjct: 126 KMPIRTQFI 132
BLAST of Spo11977.1 vs. TAIR (Arabidopsis)
Match:
ATCG00790.1 (ribosomal protein L16)
HSP 1 Score: 159.1 bits (401), Expect = 3.300e-39
Identity = 76/129 (58.91%), Postives = 106/129 (82.17%), Query Frame = 1
Query: 100 RKRFTKERRNRGEIKGVSD--NVLSFGKYALQALEPAWITSKQITAGQLAIKRNMR-GGK 159 R RF K+ +RG +KG+S N + FG+YALQ LEPAWITS+QI AG+ A+ RN+R GGK Sbjct: 6 RTRFRKQ--HRGRLKGISSRGNRICFGRYALQTLEPAWITSRQIEAGRRAMTRNVRRGGK 65 Query: 160 LFMRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVAAS 219 +++RIFP KP+++RPAETRMG GKG+ +WVA VK G+++YE+ GVPE++ARKAI++AAS Sbjct: 66 IWVRIFPDKPVTVRPAETRMGSGKGSPEYWVAVVKPGKILYEMGGVPENIARKAISIAAS 125 Query: 220 KFPLRTRFV 226 K P++T+F+ Sbjct: 126 KMPIKTQFI 132
BLAST of Spo11977.1 vs. TAIR (Arabidopsis)
Match:
AT2G28830.1 (PLANT U-BOX 12)
HSP 1 Score: 135.6 bits (340), Expect = 3.900e-32
Identity = 70/131 (53.44%), Postives = 96/131 (73.28%), Query Frame = 1
Query: 97 ANVRKRFTKERRNRGEI-KGVSDNVLSFGKYALQALEPAWITSKQITAGQLAIKRNM-RG 156 +++ +R ++ +RG I KGVS +YALQ LEPAWITS+QI AG+ A+ RN+ RG Sbjct: 829 SDIPRRTKFQKHHRGRINKGVSSQGYICSRYALQTLEPAWITSRQIEAGRRAMTRNIGRG 888 Query: 157 GKLFMRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARKAITVA 216 + + IF KP+++RP ETRMGRGKG AFWVA VK G++IYE+ GV E VAR+AI++A Sbjct: 889 LTVRVHIFADKPVTVRPPETRMGRGKGAPAFWVAVVKPGKIIYEMGGVSEKVAREAISIA 948 Query: 217 ASKFPLRTRFV 226 ASK P +T+F+ Sbjct: 949 ASKLPAKTKFI 959
BLAST of Spo11977.1 vs. TAIR (Arabidopsis)
Match:
ATMG00080.1 (ribosomal protein L16)
HSP 1 Score: 79.7 bits (195), Expect = 2.500e-15
Identity = 48/137 (35.04%), Postives = 78/137 (56.93%), Query Frame = 1
Query: 100 RKRFTKERRNRGEIKGVSDNV-LSFGKYALQALEPAWITSKQITAGQLAIKRNM------ 159 R +++K R+ R D L FG+Y ++ + ++ + I A + AI + Sbjct: 41 RTKYSKYRKGRCSRGCKPDGTKLGFGRYGTKSCKAGRLSYRAIEAARRAIIGHFHRAMSG 100 Query: 160 ---RGGKLFMRIFPHKPISLRPAETRMGRGKGNIAFWVAGVKTGRMIYEINGVPESVARK 219 R GK+++R+F PI+ +P E RMGRGKGN W+A V TG++ +E++GV + AR+ Sbjct: 101 QFRRNGKIWVRVFADLPITGKPTEVRMGRGKGNPTGWIARVSTGQIPFEMDGVSLANARQ 160 Query: 220 AITVAASKFPLRTRFVK 227 A T+AA K T+FV+ Sbjct: 161 AATLAAHKPCSSTKFVQ 177
The following BLAST results are available for this feature:
BLAST of Spo11977.1 vs. NCBI nr
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. NCBI nr )
Total hits: 5
A T G G C T A C T A G A G T G A T C T C T C A A A T C A G A A A A C T T C C C C T T G T G A A T G C A C T G A G G C A G G C T A G C C A G C C A T C T G C T A C T C C T G G C T C A T A C A G C T C A A G A T G G A T C A T G C C A T C T A C T T C T G T G G G T C C C A C T T T G A A G A A A A C C A G T G G T C T T A C T C C T G C A A T G G G G T C T C T A T T T A G A A A T T C G G G C T T A G G A T C A G T T A C T G C A C A T C C A C G C T C T G G T T T T T C C G C G A G T A T T C C A A G T A T G T C A G T A T C T G T A C G C T A C A A T T C A A C A T C A G G G A T A T A C G C A A A T G T T A G G A A G A G G T T T A C T A A A G A A C G C A G A A A C A G A G G A G A A A T A A A G G G G G T T T C G G A T A A C G T T C T T T C T T T T G G T A A A T A T G C A C T T C A G G C A C T C G A A C C A G C T T G G A T C A C A T C T A A A C A A A T C A C A G C A G G A C A G C T G G C A A T C A A G A G G A A C A T G C G C G G T G G G A A G C T T T T C A T G C G T A T A T T T C C A C A C A A A C C G A T T T C T C T A A G G C C C G C T G A A A C C C G T A T G G G T C G A G G G A A A G G A A A C A T A G C A T T T T G G G T T G C T G G T G T T A A A A C T G G T A G A A T G A T T T A T G A A A T A A A C G G A G T T C C G G A A A G T G T A G C G C G T A A A G C A A T C A C A G T T G C A G C A T C G A A A T T T C C T C T G A G A A C C A G G T T T G T C A A A T G T T A G 100 200 300 400 500 600 Expect = 1.60e-120 / Id = 99.56 Expect = 3.00e-87 / Id = 72.43 Expect = 1.70e-37 / Id = 59.54 Expect = 2.20e-37 / Id = 60.63 Expect = 4.90e-37 / Id = 60.94 Sequence KNA23664.1 KMT14691.1 YP_001381692.1 YP_009141646.1 ALI90840.1
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BLAST of Spo11977.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL )
Total hits: 5
A T G G C T A C T A G A G T G A T C T C T C A A A T C A G A A A A C T T C C C C T T G T G A A T G C A C T G A G G C A G G C T A G C C A G C C A T C T G C T A C T C C T G G C T C A T A C A G C T C A A G A T G G A T C A T G C C A T C T A C T T C T G T G G G T C C C A C T T T G A A G A A A A C C A G T G G T C T T A C T C C T G C A A T G G G G T C T C T A T T T A G A A A T T C G G G C T T A G G A T C A G T T A C T G C A C A T C C A C G C T C T G G T T T T T C C G C G A G T A T T C C A A G T A T G T C A G T A T C T G T A C G C T A C A A T T C A A C A T C A G G G A T A T A C G C A A A T G T T A G G A A G A G G T T T A C T A A A G A A C G C A G A A A C A G A G G A G A A A T A A A G G G G G T T T C G G A T A A C G T T C T T T C T T T T G G T A A A T A T G C A C T T C A G G C A C T C G A A C C A G C T T G G A T C A C A T C T A A A C A A A T C A C A G C A G G A C A G C T G G C A A T C A A G A G G A A C A T G C G C G G T G G G A A G C T T T T C A T G C G T A T A T T T C C A C A C A A A C C G A T T T C T C T A A G G C C C G C T G A A A C C C G T A T G G G T C G A G G G A A A G G A A A C A T A G C A T T T T G G G T T G C T G G T G T T A A A A C T G G T A G A A T G A T T T A T G A A A T A A A C G G A G T T C C G G A A A G T G T A G C G C G T A A A G C A A T C A C A G T T G C A G C A T C G A A A T T T C C T C T G A G A A C C A G G T T T G T C A A A T G T T A G 100 200 300 400 500 600 Expect = 1.10e-120 / Id = 99.56 Expect = 2.10e-87 / Id = 72.43 Expect = 1.50e-37 / Id = 60.63 Expect = 1.50e-37 / Id = 60.63 Expect = 1.50e-37 / Id = 60.63 Sequence A0A0K9RXM5_SPIOL A0A0J8FFT9_BETVU A0A0F6NLP2_9FABA A0A0F6NLX6_9FABA S4SZ13_MEDTR
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BLAST of Spo11977.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. ExPASy SwissProt )
Total hits: 5
A T G G C T A C T A G A G T G A T C T C T C A A A T C A G A A A A C T T C C C C T T G T G A A T G C A C T G A G G C A G G C T A G C C A G C C A T C T G C T A C T C C T G G C T C A T A C A G C T C A A G A T G G A T C A T G C C A T C T A C T T C T G T G G G T C C C A C T T T G A A G A A A A C C A G T G G T C T T A C T C C T G C A A T G G G G T C T C T A T T T A G A A A T T C G G G C T T A G G A T C A G T T A C T G C A C A T C C A C G C T C T G G T T T T T C C G C G A G T A T T C C A A G T A T G T C A G T A T C T G T A C G C T A C A A T T C A A C A T C A G G G A T A T A C G C A A A T G T T A G G A A G A G G T T T A C T A A A G A A C G C A G A A A C A G A G G A G A A A T A A A G G G G G T T T C G G A T A A C G T T C T T T C T T T T G G T A A A T A T G C A C T T C A G G C A C T C G A A C C A G C T T G G A T C A C A T C T A A A C A A A T C A C A G C A G G A C A G C T G G C A A T C A A G A G G A A C A T G C G C G G T G G G A A G C T T T T C A T G C G T A T A T T T C C A C A C A A A C C G A T T T C T C T A A G G C C C G C T G A A A C C C G T A T G G G T C G A G G G A A A G G A A A C A T A G C A T T T T G G G T T G C T G G T G T T A A A A C T G G T A G A A T G A T T T A T G A A A T A A A C G G A G T T C C G G A A A G T G T A G C G C G T A A A G C A A T C A C A G T T G C A G C A T C G A A A T T T C C T C T G A G A A C C A G G T T T G T C A A A T G T T A G 100 200 300 400 500 600 Expect = 5.30e-39 / Id = 62.79 Expect = 9.00e-39 / Id = 62.02 Expect = 1.50e-38 / Id = 62.02 Expect = 2.00e-38 / Id = 62.02 Expect = 2.00e-38 / Id = 62.02 Sequence RK16_FAGEA RK16_POPTR RK16_SOLBU RK16_SOLLC RK16_ATRBE
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BLAST of Spo11977.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (
blastp Spinacia oleracea peptides vs. TAIR )
Total hits: 3
A T G G C T A C T A G A G T G A T C T C T C A A A T C A G A A A A C T T C C C C T T G T G A A T G C A C T G A G G C A G G C T A G C C A G C C A T C T G C T A C T C C T G G C T C A T A C A G C T C A A G A T G G A T C A T G C C A T C T A C T T C T G T G G G T C C C A C T T T G A A G A A A A C C A G T G G T C T T A C T C C T G C A A T G G G G T C T C T A T T T A G A A A T T C G G G C T T A G G A T C A G T T A C T G C A C A T C C A C G C T C T G G T T T T T C C G C G A G T A T T C C A A G T A T G T C A G T A T C T G T A C G C T A C A A T T C A A C A T C A G G G A T A T A C G C A A A T G T T A G G A A G A G G T T T A C T A A A G A A C G C A G A A A C A G A G G A G A A A T A A A G G G G G T T T C G G A T A A C G T T C T T T C T T T T G G T A A A T A T G C A C T T C A G G C A C T C G A A C C A G C T T G G A T C A C A T C T A A A C A A A T C A C A G C A G G A C A G C T G G C A A T C A A G A G G A A C A T G C G C G G T G G G A A G C T T T T C A T G C G T A T A T T T C C A C A C A A A C C G A T T T C T C T A A G G C C C G C T G A A A C C C G T A T G G G T C G A G G G A A A G G A A A C A T A G C A T T T T G G G T T G C T G G T G T T A A A A C T G G T A G A A T G A T T T A T G A A A T A A A C G G A G T T C C G G A A A G T G T A G C G C G T A A A G C A A T C A C A G T T G C A G C A T C G A A A T T T C C T C T G A G A A C C A G G T T T G T C A A A T G T T A G 100 200 300 400 500 600 Expect = 3.30e-39 / Id = 58.91 Expect = 3.90e-32 / Id = 53.44 Expect = 2.50e-15 / Id = 35.04 Sequence ATCG00790.1 AT2G28830.1 ATMG00080.1
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