Spo25816 (gene) | SpinachBase

Overview


Name	Spo25816
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Acyl carrier protein
Location	chr4 : 11630118 .. 11634142 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAGCTATCTCAAACACCCTTCCTTTGGTTAGCCTAACTCGAAGAGTGAGTAATATACACCGAACCTAGAAGAAGAAGAAGTCTCTTCACTCTTCAGCCACAAAAACCCTCCGCAAACCCCCCATTTCCCTCCCTCCTCGTTGCAGCACGACAGTCGACACCATCTCTTTCTCTCTCCTCCTTCAACAATGGCGGCTGTTCGCTCTGCAATTCTGAAATACATGAGGGTGCCAGTAGCCCAAAACACTTACTCTCCATCTTCGATTTCATCTTCCATCAACTCCTTCTTCTCTCGCCGCAACTTTTCCGATGAGGTCCGAGGTTCCTTCCTCGACAAGTCCGAGGTTTCTGATCGCGTCATTACCGTTGTCAAGAACTTCCAGAAAGTTGACCCTTCCAAGGTTTGAGGCTTTGATCTCCATTTTTTCCGATTATTTGATTTTGAAATGTCGATAAATTGCGTATTTAGTTTCGTAAATTGGTAGAAGTTTCTTGCTACGAGTCGACATTTTAGGGTTCTTTTGTCTGATTTCCTTACAAGCGTTAATTGTTGATTCATTGAATTTAGAATAATTAACTTAGGGTTTTTAAATAACTGCTATGCCGGAGGGGCACCTCCGATTTGTTGTTGATTTTGGAGAAGATTGAGTTAGAGATCTTATCCAAATGTATCCATCTTAAGGGATTGATGAGGTGATTTTGTTGGTGGATACTGAAATGGGATTTTCGTTGTCCAATTATAATAATAAGAATCGGGATCAGTTTCGATTATCGGTATGAAATTGAACAGGTGTTACAGACTTACAGGTCTATATATATTTTGATGCTTGTTCGTTTGAATTCAAGGGGGATTTGAAGAAGAAGGATTGTTCTGTAGGATGTTTTTATTGTAAGTGGAATAGGAGGGCAAAACATTAGCTTACTTGACTTATTTTGTGTTCTTTAAGGGAAGTACAGCCCTGGGAATAATAATGGACATAAATGTATGAGTCCGAAATTTTCTGCTAGCTAGTGACTGGTTGTGTATGTTTGCATTCATAAGTTGTGTGATATAAAGTCTTTCCCGCTCTGCAAGTCAACAGGGTAGTGTGAGAAATTGGATTTGGGATGTACATATTTTTTTCTGTGATTTTTAAACATGATTCCTGATGTCTTACTCTTTGCATAGGACCAGCATCCGTAGATTCGGCTTCTTTCCTTGTATTTACTGCTGTTTGGAACTGCTTTGTTTATTTTCTGTATTTTGGCTTAGGAGTGTATTTTATCATTATCTTTCAATAAATGTATTCAAAGTATATGTCCTCAAACGATAGTAGAAGTTGGCCCTGAACTGTTTTGTTGGTAAGTATGCTTCATGGATGGCATATTGCTTTCTTTTTTAACGTTTTTTTATGCTTAACCAAACCTTGGAGACCAGAGTAGCTATTTGTGTATTGTGGATGCATGTGTTTTGTACCTGGTGATATTTGGTGGCCCTTTATCCAAATGATCATGAGAAGTTCAGTTTTAGTCTACAACTAACATGAATATTTCTTATTCTGTCCCACAATGACTGCCCTATTTCACTCTTCACCAATGGTAGAGAATATAATTTATAAGCGGAGTTGAATGATATGGAATAGTGTTTTAGCACTGTAGGAACTAGGAAAAATGATAGGAGGAATAGAGACTTCAAAGGTGAAGGTAAGCAGGGAAACTCTACTTACAGTTGTCCGAAATTAAGGCTCTTCATGAATGAATTTCATGTCTTGTGATTTTACTCTTGTCATTACTAGTAAAATGGGAGAGGTCTTTCTTCTGTTTGGGAAGGAGGTGCAATTTGTGGCCGTTTTGGGATGAAGTGAAAAGTGCTTATGATTACGCCTGACAGCTAAACAGATTAGTGAAATGGGATAAACCTAAGATAGAAACGGGAATGTCATTTTGGGCCGAAGGATGTGGTTATTTTATATTTAATCCTTTTTTTCTTCCCTGTTTTTAACGGGATATGGGATTGAATTTAAGTTCTTGTATAGAAACTTTTACATGCTCCCTTTGTGACGCAAATCAACCAACTTGTCAAGCTAGTTTGGCATGTTGTGAAAGTCTAGCGCACTTGTAGTAGCAGATACTCACCAAGAAACATCCATCTGGGTCTAGAAAATATTTGCTTTCACTCTTCTTCTCTTTGTTCTTTGCGCCTTCAGCATGTTTATCTGATTCGTATAGAAATATGGGAAAGCATATAGGGGGACTTGATCATACAGGTGGGAAATGCTTTTGATTATTCTTAGTGAGAAAGAGAATATATCTTAGGCGTCGGAGATTTGTGTAAGTAAATATGCTTCACACATCATTTATGCTATCTCCCTTTTTCATCAATTACTCTCTACCTTTGACAGCAACGGATTCCCTACCTATCCTCCTTAGTTTGCGTCTTCATTCTCTCTCCTTTTAGTCCCCCTCTCCCAAATAGCTACCCTTGACAACAAACATCGATAATACTTGCGTACTGTTGTGAAGCTTCCTCCTTCGTATGCTGGTGCCTCCATCTGAAAATCTCAGGCTCAATAAGTCATCCAACTGAAGCGAGAGGAAATGCTTCATGCCCTGCTGCCAGGTGTTTTCGCCTAGAGTGCCACCACTTCCCTTGTGCAGCGAGTACGGGTATGTGTATGTGTTGTGAGTTATGTCTGCTAGTGTTGCTGAGTGCCTGGTCTGTGGGTCGGCGGGCCTCAAAAATCAGAGAGCATATTAGAAAGTTGGGGGGGGGGGGATCAGTAAAAGTCCCAAACTTTGAAATGAGAGATTTAAAACAACAGTTAGAACTAAAATGCGAGTGTCCATGTAAAAATGTGCCCACACTCTTTTTTTCTTTAAAGAAACAAATAATGTTCTTTATCCATTTCTTTGTGTATCCGACATTTGAATACTTGTGTCAGCCATAAAACGGCACCGACATGCTGTTTTTACACAAAAGAAACAATGCTTGTCTGTAGATAGTATTTACTCGAGAAGAAGTGAATTTGTGCACGTTTTGGAACACCAAAAGAATTTTAGAGTACATTGAAACTGCATAAGATCTTTACTGGATTCGGTGAGAGGTGAGGAGATCGGCAGTTAGGAGTATTAAACGCGAACAACTAAGTATTGAATGAATCACATGCTCAATCTTTTAGATGCACATGTTGCTCTAGAAAGGAGCAAATAATTCCTCACTTATCTGCTTCTTCCTTTTATTTCCGCATGTTCAATCTTTTAGTTGGCTATACTTGCAATTTATCCTGCAATAATGAAATGCCTTCTTGTTACGTTCTATTTTACTTTAATACTTACAGTCTCTGTGTCCATAACTGTGTTTCTGAGGTTCCGTGTATTTTATTGCTTATACTTATTTATATCCGCAGGTTACTCCCAATGCACACTTCCAAAATGATCTCGGACTTGACAGTTTGGACGCTGTTGAAATTGTGATGGCTCTTGAAGAAGAATTCCGCTTTGAGATTCCAGACAACGAAGCAGACAAGATCAACTCCATCAGTATGGCAGTTGACTTCATTGCATCTCACCCTCAGGCAAAATAGATAAGAGAGTTTAAGGGCCCCATTCACTATGCTCTCTAGTTTCAGATGAATATTGCTTTAGAAGACATAATTAGGGCTGTTTCTTTTGCACGTTTAGACTATTTTCCGTGCTTGTCATATACCCTCTTGAACAACCTTGAGGAATTGAGGTGGTCTTTACCCCCTTTGTCCAATTACATTGTTGTTGCATTTTAAGTGTGTGATTCTTGTATTTGGAGACCATTTTTGCTGAGGCTGGTGTTACAACAGTATCACGCCGCCTAAGAGAGTTGAGAATAATTACTGTATATCTTTAACAAGATTGTAATCGACTTTTCGATCACATTTTTTTTCTGTTTATGACTGTGTTTTATGTTTTAGCAAAATGCAGCAGCTAATAGTTTGTGATCTGGTGAAGTGGTGGTCCATTCACACTTTGTTTGGCACCAACTTTGAATTTTCCTTATCAGAAATGCCGTG

mRNA sequence

GAAAAAGCTATCTCAAACACCCTTCCTTTGGTTAGCCTAACTCGAAGAGTGAGTAATATACACCGAACCTAGAAGAAGAAGAAGTCTCTTCACTCTTCAGCCACAAAAACCCTCCGCAAACCCCCCATTTCCCTCCCTCCTCGTTGCAGCACGACAGTCGACACCATCTCTTTCTCTCTCCTCCTTCAACAATGGCGGCTGTTCGCTCTGCAATTCTGAAATACATGAGGGTGCCAGTAGCCCAAAACACTTACTCTCCATCTTCGATTTCATCTTCCATCAACTCCTTCTTCTCTCGCCGCAACTTTTCCGATGAGGTCCGAGGTTCCTTCCTCGACAAGTCCGAGGTTTCTGATCGCGTCATTACCGTTGTCAAGAACTTCCAGAAAGTTGACCCTTCCAAGGTTACTCCCAATGCACACTTCCAAAATGATCTCGGACTTGACAGTTTGGACGCTGTTGAAATTGTGATGGCTCTTGAAGAAGAATTCCGCTTTGAGATTCCAGACAACGAAGCAGACAAGATCAACTCCATCAGTATGGCAGTTGACTTCATTGCATCTCACCCTCAGGCAAAATAGATAAGAGAGTTTAAGGGCCCCATTCACTATGCTCTCTAGTTTCAGATGAATATTGCTTTAGAAGACATAATTAGGGCTGTTTCTTTTGCACGTTTAGACTATTTTCCGTGCTTGTCATATACCCTCTTGAACAACCTTGAGGAATTGAGGTGGTCTTTACCCCCTTTGTCCAATTACATTGTTGTTGCATTTTAAGTGTGTGATTCTTGTATTTGGAGACCATTTTTGCTGAGGCTGGTGTTACAACAGTATCACGCCGCCTAAGAGAGTTGAGAATAATTACTGTATATCTTTAACAAGATTGTAATCGACTTTTCGATCACATTTTTTTTCTGTTTATGACTGTGTTTTATGTTTTAGCAAAATGCAGCAGCTAATAGTTTGTGATCTGGTGAAGTGGTGGTCCATTCACACTTTGTTTGGCACCAACTTTGAATTTTCCTTATCAGAAATGCCGTG

Coding sequence (CDS)

ATGGCGGCTGTTCGCTCTGCAATTCTGAAATACATGAGGGTGCCAGTAGCCCAAAACACTTACTCTCCATCTTCGATTTCATCTTCCATCAACTCCTTCTTCTCTCGCCGCAACTTTTCCGATGAGGTCCGAGGTTCCTTCCTCGACAAGTCCGAGGTTTCTGATCGCGTCATTACCGTTGTCAAGAACTTCCAGAAAGTTGACCCTTCCAAGGTTACTCCCAATGCACACTTCCAAAATGATCTCGGACTTGACAGTTTGGACGCTGTTGAAATTGTGATGGCTCTTGAAGAAGAATTCCGCTTTGAGATTCCAGACAACGAAGCAGACAAGATCAACTCCATCAGTATGGCAGTTGACTTCATTGCATCTCACCCTCAGGCAAAATAG

Protein sequence

MAAVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVDFIASHPQAK

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo25816.1	Spo25816.1	mRNA

Homology

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BLAST of Spo25816.1 vs. NCBI nr
Match: gi|902137340|gb|KNA04496.1| (hypothetical protein SOVF_199180 [Spinacia oleracea])

HSP 1 Score: 246.9 bits (629), Expect = 1.900e-62
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1

		  
Query: 1   MAAVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITV 60
           MAAVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITV
Sbjct: 1   MAAVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITV 60

Query: 61  VKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVD 120
           VKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVD
Sbjct: 61  VKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVD 120

Query: 121 FIASHPQAK 130
           FIASHPQAK
Sbjct: 121 FIASHPQAK 129

[Close]

BLAST of Spo25816.1 vs. NCBI nr
Match: gi|731326183|ref|XP_010673891.1| (PREDICTED: acyl carrier protein 2, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 208.8 bits (530), Expect = 5.800e-51
Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 1

		  
Query: 1   MAAVRSAILKYMRVPV----AQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDR 60
           MAA RSAILKYMRVPV    +QN Y+P SISSS NS  SRR+FSDEVR SFLDKSEV+DR
Sbjct: 1   MAAARSAILKYMRVPVTRSLSQNPYTPFSISSSFNSLLSRRHFSDEVRASFLDKSEVTDR 60

Query: 61  VITVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSIS 120
           VI VVKNFQKVDPSKV PNAHFQNDLGLDSLD VEIVMALEEEFRFEI DNEADKINSI+
Sbjct: 61  VICVVKNFQKVDPSKVNPNAHFQNDLGLDSLDTVEIVMALEEEFRFEIGDNEADKINSIN 120

Query: 121 MAVDFIASHPQAK 130
           MAVDFIASHP AK
Sbjct: 121 MAVDFIASHPHAK 133

[Close]

BLAST of Spo25816.1 vs. NCBI nr
Match: gi|595830791|ref|XP_007206137.1| (hypothetical protein PRUPE_ppa013239mg [Prunus persica])

HSP 1 Score: 189.9 bits (481), Expect = 2.800e-45
Identity = 103/131 (78.63%), Postives = 113/131 (86.26%), Query Frame = 1

		  
Query: 2   AAVRSAILKYMRVPVAQNTYSPSSISSSINSFFS---RRNFSDEVRGSFLDKSEVSDRVI 61
           AA RSAILKY+RVPV     +PSS +    S F+   RR FS+EVRG+FLDKSEV+DRVI
Sbjct: 3   AAARSAILKYLRVPVPAVPSNPSSTTPLFLSPFNAIRRRLFSEEVRGTFLDKSEVTDRVI 62

Query: 62  TVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMA 121
           +VVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEF FEIPDNEADKINSI +A
Sbjct: 63  SVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIGLA 122

Query: 122 VDFIASHPQAK 130
           VDFI+SHPQAK
Sbjct: 123 VDFISSHPQAK 133

[Close]

BLAST of Spo25816.1 vs. NCBI nr
Match: gi|764596683|ref|XP_011466080.1| (PREDICTED: acyl carrier protein 2, mitochondrial [Fragaria vesca subsp. vesca])

HSP 1 Score: 185.3 bits (469), Expect = 6.900e-44
Identity = 94/129 (72.87%), Postives = 111/129 (86.05%), Query Frame = 1

		  
Query: 1   MAAVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITV 60
           MAA RS +LKY+RVPV Q      S+++++ +    R +S++VRG+FLDKSEV+DR+ITV
Sbjct: 1   MAAARSVMLKYLRVPVVQGVQPNPSVATTLFNAVRARFYSEDVRGTFLDKSEVTDRIITV 60

Query: 61  VKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVD 120
           VKNFQKVDPSKVTP+AHFQ DLGLDSLDAVEIVMALEEEF FEIPDNEADKINSI +AVD
Sbjct: 61  VKNFQKVDPSKVTPDAHFQKDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIGLAVD 120

Query: 121 FIASHPQAK 130
           FI+SHPQAK
Sbjct: 121 FISSHPQAK 129

[Close]

BLAST of Spo25816.1 vs. NCBI nr
Match: gi|568853667|ref|XP_006480468.1| (PREDICTED: acyl carrier protein 2, mitochondrial [Citrus sinensis])

HSP 1 Score: 184.9 bits (468), Expect = 9.000e-44
Identity = 99/129 (76.74%), Postives = 110/129 (85.27%), Query Frame = 1

		  
Query: 1   MAAVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITV 60
           MAA R A+LKY+RV V     +PS  S S NS   RR F++EVRGSFLDKSEV+DRVI+V
Sbjct: 1   MAAARGALLKYLRVNVTTVQRNPSPFSLSFNSI--RRCFAEEVRGSFLDKSEVTDRVISV 60

Query: 61  VKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVD 120
           VKNFQKVDPSKVT NAHFQNDLGLDSLD VE+VMALEEEF FEIPDNEADKI++I+MAVD
Sbjct: 61  VKNFQKVDPSKVTVNAHFQNDLGLDSLDTVEVVMALEEEFGFEIPDNEADKISTINMAVD 120

Query: 121 FIASHPQAK 130
           FIASHPQAK
Sbjct: 121 FIASHPQAK 127

[Close]

BLAST of Spo25816.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QD69_SPIOL (Acyl carrier protein OS=Spinacia oleracea GN=SOVF_199180 PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.300e-62
Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 1

		  
Query: 1   MAAVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITV 60
           MAAVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITV
Sbjct: 1   MAAVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITV 60

Query: 61  VKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVD 120
           VKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVD
Sbjct: 61  VKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVD 120

Query: 121 FIASHPQAK 130
           FIASHPQAK
Sbjct: 121 FIASHPQAK 129

[Close]

BLAST of Spo25816.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CRR6_BETVU (Acyl carrier protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g074860 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.100e-51
Identity = 112/133 (84.21%), Postives = 117/133 (87.97%), Query Frame = 1

		  
Query: 1   MAAVRSAILKYMRVPV----AQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDR 60
           MAA RSAILKYMRVPV    +QN Y+P SISSS NS  SRR+FSDEVR SFLDKSEV+DR
Sbjct: 1   MAAARSAILKYMRVPVTRSLSQNPYTPFSISSSFNSLLSRRHFSDEVRASFLDKSEVTDR 60

Query: 61  VITVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSIS 120
           VI VVKNFQKVDPSKV PNAHFQNDLGLDSLD VEIVMALEEEFRFEI DNEADKINSI+
Sbjct: 61  VICVVKNFQKVDPSKVNPNAHFQNDLGLDSLDTVEIVMALEEEFRFEIGDNEADKINSIN 120

Query: 121 MAVDFIASHPQAK 130
           MAVDFIASHP AK
Sbjct: 121 MAVDFIASHPHAK 133

[Close]

BLAST of Spo25816.1 vs. UniProtKB/TrEMBL
Match: M5W1T8_PRUPE (Acyl carrier protein OS=Prunus persica GN=PRUPE_ppa013239mg PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 1.900e-45
Identity = 103/131 (78.63%), Postives = 113/131 (86.26%), Query Frame = 1

		  
Query: 2   AAVRSAILKYMRVPVAQNTYSPSSISSSINSFFS---RRNFSDEVRGSFLDKSEVSDRVI 61
           AA RSAILKY+RVPV     +PSS +    S F+   RR FS+EVRG+FLDKSEV+DRVI
Sbjct: 3   AAARSAILKYLRVPVPAVPSNPSSTTPLFLSPFNAIRRRLFSEEVRGTFLDKSEVTDRVI 62

Query: 62  TVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMA 121
           +VVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEF FEIPDNEADKINSI +A
Sbjct: 63  SVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFGFEIPDNEADKINSIGLA 122

Query: 122 VDFIASHPQAK 130
           VDFI+SHPQAK
Sbjct: 123 VDFISSHPQAK 133

[Close]

BLAST of Spo25816.1 vs. UniProtKB/TrEMBL
Match: A0A059D2E0_EUCGR (Acyl carrier protein OS=Eucalyptus grandis GN=EUGRSUZ_B01464 PE=3 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 4.100e-43
Identity = 97/127 (76.38%), Postives = 107/127 (84.25%), Query Frame = 1

		  
Query: 3   AVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITVVK 62
           A RSA+LKY+RVPV  +  S   + S      + R FS+EVRGSFLDKSEV+DRV+TVVK
Sbjct: 6   AARSALLKYLRVPVKPSLPSGPPLPSF---GLALRRFSEEVRGSFLDKSEVTDRVVTVVK 65

Query: 63  NFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVDFI 122
           NFQKVDPSKVTPNAHFQNDLGLDSLD VEIVMALEEEF FEIPDNEADKIN+I +AVDFI
Sbjct: 66  NFQKVDPSKVTPNAHFQNDLGLDSLDTVEIVMALEEEFGFEIPDNEADKINTIELAVDFI 125

Query: 123 ASHPQAK 130
           ASHPQAK
Sbjct: 126 ASHPQAK 129

[Close]

BLAST of Spo25816.1 vs. UniProtKB/TrEMBL
Match: B9IQ34_POPTR (Acyl carrier protein OS=Populus trichocarpa GN=POPTR_0019s08300g PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 6.900e-43
Identity = 95/132 (71.97%), Postives = 110/132 (83.33%), Query Frame = 1

		  
Query: 3   AVRSAILKYMRV-----PVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRV 62
           A R A+LKY+RV     P  +N  +   +  S NS   RR FS+EVRG+FLDKSEV+DRV
Sbjct: 2   AARGALLKYLRVKVQAMPTTRNPNNNGLVGLSFNSI--RRRFSEEVRGTFLDKSEVTDRV 61

Query: 63  ITVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISM 122
           + VVKNFQKVDPSKVTP+AHFQNDLGLDSLD+VEIVMALEEEF+FEIPDNEADKINSIS+
Sbjct: 62  VNVVKNFQKVDPSKVTPDAHFQNDLGLDSLDSVEIVMALEEEFQFEIPDNEADKINSISL 121

Query: 123 AVDFIASHPQAK 130
           A+DFI+SHPQAK
Sbjct: 122 AIDFISSHPQAK 131

[Close]

BLAST of Spo25816.1 vs. ExPASy Swiss-Prot
Match: ACPM2_ARATH (Acyl carrier protein 2, mitochondrial OS=Arabidopsis thaliana GN=MTACP2 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 5.500e-41
Identity = 89/127 (70.08%), Postives = 102/127 (80.31%), Query Frame = 1

		  
Query: 3   AVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITVVK 62
           A R A+L+Y+RV V     +P       +     R FS+EVRGSFLDKSEV+DRV++VVK
Sbjct: 2   AARGAMLRYLRVNVNPTIQNPRECVLPFSILL--RRFSEEVRGSFLDKSEVTDRVLSVVK 61

Query: 63  NFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVDFI 122
           NFQKVDPSKVTP A+FQNDLGLDSLD+VE+VMALEEEF FEIPDNEADKI SI +AVDFI
Sbjct: 62  NFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVDFI 121

Query: 123 ASHPQAK 130
           ASHPQAK
Sbjct: 122 ASHPQAK 126

[Close]

BLAST of Spo25816.1 vs. ExPASy Swiss-Prot
Match: ACPM1_ARATH (Acyl carrier protein 1, mitochondrial OS=Arabidopsis thaliana GN=MTACP1 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 3.100e-28
Identity = 69/128 (53.91%), Postives = 90/128 (70.31%), Query Frame = 1

		  
Query: 3   AVRSAILKYMRVPVAQNTYSPSSIS--SSINSFFSRRNFSDEVRGSFLDKSEVSDRVITV 62
           A+R+AIL+++RVPV     + S I    +I SF S  +         L +  V DRV+ V
Sbjct: 2   ALRNAILRHLRVPVQTLGLNQSKIGFLGTIRSFSSHDDH--------LSREAVVDRVLDV 61

Query: 63  VKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVD 122
           VK+F KVDPSKVTP  HFQNDLGLDSLD VEIVMA+EEEF+ EIPD EADKI+S S+A++
Sbjct: 62  VKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIE 121

Query: 123 FIASHPQA 129
           ++ +HP +
Sbjct: 122 YVYNHPMS 121

[Close]

BLAST of Spo25816.1 vs. ExPASy Swiss-Prot
Match: ACPM_NEUCR (Acyl carrier protein, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nuo-12 PE=1 SV=2)

HSP 1 Score: 94.7 bits (234), Expect = 7.700e-19
Identity = 56/125 (44.80%), Postives = 76/125 (60.80%), Query Frame = 1

		  
Query: 5   RSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITVVKNF 64
           R A+   +R  VA+  +  +     + +F + R +S    G  L K EV  R+  V+  F
Sbjct: 14  RPAVASAVRAGVARPAFVQAV--PKVAAFQAVRFYS---AGGHLKKDEVFSRIAQVLSGF 73

Query: 65  QKV-DPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVDFIA 124
            KV DP  +T  AHF NDLGLDSLD VE+VMA+EEEF  EIPD +AD+I+S+  AV++I 
Sbjct: 74  DKVNDPKNITETAHFANDLGLDSLDTVEVVMAIEEEFSIEIPDKDADQIHSVDKAVEYIL 133

Query: 125 SHPQA 129
           S P A
Sbjct: 134 SQPDA 133

[Close]

BLAST of Spo25816.1 vs. ExPASy Swiss-Prot
Match: ACPM_SCHPO (Putative acyl carrier protein, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC4H3.09 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.900e-18
Identity = 43/81 (53.09%), Postives = 60/81 (74.07%), Query Frame = 1

		  
Query: 50  KSEVSDRVITVVKNFQKV-DPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNE 109
           + +   R++ VV +F K+ DP KVTP + F NDLGLDSLDAVE+VMA+EEEF  +IPD +
Sbjct: 32  RPDAEKRILKVVSSFDKIQDPKKVTPTSTFANDLGLDSLDAVEVVMAIEEEFSIQIPDKD 91

Query: 110 ADKINSISMAVDFIASHPQAK 130
           AD+I S+  A+ +I  +P+AK
Sbjct: 92  ADEITSVGDAISYITKNPEAK 112

[Close]

BLAST of Spo25816.1 vs. ExPASy Swiss-Prot
Match: ACPM_MOUSE (Acyl carrier protein, mitochondrial OS=Mus musculus GN=Ndufab1 PE=1 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 6.100e-16
Identity = 39/71 (54.93%), Postives = 54/71 (76.06%), Query Frame = 1

		  
Query: 53  VSDRVITVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKI 112
           + DRV+ V+K + K+DP K++ N+HF  DLGLDSLD VEI+MA+E+EF FEIPD +A+K+
Sbjct: 79  IKDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKL 138

Query: 113 NSISMAVDFIA 124
                 VD+IA
Sbjct: 139 MCPQEIVDYIA 149

[Close]

BLAST of Spo25816.1 vs. TAIR (Arabidopsis)
Match: AT1G65290.1 (mitochondrial acyl carrier protein 2)

HSP 1 Score: 168.3 bits (425), Expect = 3.100e-42
Identity = 89/127 (70.08%), Postives = 102/127 (80.31%), Query Frame = 1

		  
Query: 3   AVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRRNFSDEVRGSFLDKSEVSDRVITVVK 62
           A R A+L+Y+RV V     +P       +     R FS+EVRGSFLDKSEV+DRV++VVK
Sbjct: 2   AARGAMLRYLRVNVNPTIQNPRECVLPFSILL--RRFSEEVRGSFLDKSEVTDRVLSVVK 61

Query: 63  NFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVDFI 122
           NFQKVDPSKVTP A+FQNDLGLDSLD+VE+VMALEEEF FEIPDNEADKI SI +AVDFI
Sbjct: 62  NFQKVDPSKVTPKANFQNDLGLDSLDSVEVVMALEEEFGFEIPDNEADKIQSIDLAVDFI 121

Query: 123 ASHPQAK 130
           ASHPQAK
Sbjct: 122 ASHPQAK 126

[Close]

BLAST of Spo25816.1 vs. TAIR (Arabidopsis)
Match: AT2G44620.1 (mitochondrial acyl carrier protein 1)

HSP 1 Score: 125.9 bits (315), Expect = 1.700e-29
Identity = 69/128 (53.91%), Postives = 90/128 (70.31%), Query Frame = 1

		  
Query: 3   AVRSAILKYMRVPVAQNTYSPSSIS--SSINSFFSRRNFSDEVRGSFLDKSEVSDRVITV 62
           A+R+AIL+++RVPV     + S I    +I SF S  +         L +  V DRV+ V
Sbjct: 2   ALRNAILRHLRVPVQTLGLNQSKIGFLGTIRSFSSHDDH--------LSREAVVDRVLDV 61

Query: 63  VKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMAVD 122
           VK+F KVDPSKVTP  HFQNDLGLDSLD VEIVMA+EEEF+ EIPD EADKI+S S+A++
Sbjct: 62  VKSFPKVDPSKVTPEVHFQNDLGLDSLDTVEIVMAIEEEFKLEIPDKEADKIDSCSLAIE 121

Query: 123 FIASHPQA 129
           ++ +HP +
Sbjct: 122 YVYNHPMS 121

[Close]

BLAST of Spo25816.1 vs. TAIR (Arabidopsis)
Match: AT5G47630.1 (mitochondrial acyl carrier protein 3)

HSP 1 Score: 82.4 bits (202), Expect = 2.200e-16
Identity = 52/131 (39.69%), Postives = 75/131 (57.25%), Query Frame = 1

		  
Query: 1   MAAVRSAILKYMRVPVAQNTYSPSSISSSINSFFSRR--NFSDEVRGSFLDKSEVSDRVI 60
           M  +RS+IL+++R+ V+     P+S+  + N F S    NF+ E       + ++  RVI
Sbjct: 1   MHCIRSSILQHLRLRVSVR---PTSLLQNENGFKSIGIFNFTSEAAADG-GQDQILSRVI 60

Query: 61  TVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAVEIVMALEEEFRFEIPDNEADKINSISMA 120
            +VK + K + S+VT  A FQ DL LDSLD  E+VMA+EEEF  EIPD +ADK+      
Sbjct: 61  ELVKKYDKTNTSEVTERADFQKDLSLDSLDKTELVMAIEEEFSIEIPDEKADKLTCCGDV 120

Query: 121 VDFIASHPQAK 130
             +I S    K
Sbjct: 121 ATYILSETPTK 127

[Close]

BLAST of Spo25816.1 vs. TAIR (Arabidopsis)
Match: AT3G05020.1 (acyl carrier protein 1)

HSP 1 Score: 53.1 bits (126), Expect = 1.400e-7
Identity = 35/92 (38.04%), Postives = 48/92 (52.17%), Query Frame = 1

		  
Query: 32  SFFSRRNF-SDEVRGSFLDKSEVSDRVITVVKNFQKVDPSKVTPNAHFQNDLGLDSLDAV 91
           SF  RR+  S  +  S   K E  ++V  +VK    + P K         DLG DSLD V
Sbjct: 38  SFNLRRSIPSRRLSVSCAAKQETIEKVSAIVKKQLSLTPDKKVVAETKFADLGADSLDTV 97

Query: 92  EIVMALEEEFRFEIPDNEADKINSISMAVDFI 123
           EIVM LEEEF  ++ + +A KI ++  A + I
Sbjct: 98  EIVMGLEEEFNIQMAEEKAQKIATVEQAAELI 129

[Close]

BLAST of Spo25816.1 vs. TAIR (Arabidopsis)
Match: AT5G27200.1 (acyl carrier protein 5)

HSP 1 Score: 52.0 bits (123), Expect = 3.200e-7
Identity = 37/99 (37.37%), Postives = 48/99 (48.48%), Query Frame = 1

		  
Query: 32  SFFSRRNFSDEVRGSFLDKSEVSDRVITVVKN-FQKVDPSKVTPNAHFQNDLGLDSLDAV 91
           SF  RR     +  S   K E  ++V  +VK      D  KVT    F  +LG DSLD V
Sbjct: 40  SFSLRRLMPARLAVSCAVKQETVEKVSEIVKKQLSLTDDQKVTAGTKF-TELGADSLDTV 99

Query: 92  EIVMALEEEFRFEIPDNEADKINSISMAVDFIASHPQAK 130
           EIVM LEEEF   + +  A +I ++  A + I    Q K
Sbjct: 100 EIVMGLEEEFGITMAEERAKEIATVQQAAELIEELVQEK 137

The following BLAST results are available for this feature:

BLAST of Spo25816.1 vs. NCBI nr
BLAST of Spo25816.1 vs. UniProtKB/TrEMBL
BLAST of Spo25816.1 vs. ExPASy Swiss-Prot
BLAST of Spo25816.1 vs. TAIR (Arabidopsis)

BLAST of Spo25816.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|902137340\|gb\|KNA04496.1\|	1.9e-62	100.	hypothetical protein SOVF_1991...	[more]
gi\|731326183\|ref\|XP_010673891.1\|	5.8e-51	84.2	PREDICTED: acyl carrier protei...	[more]
gi\|595830791\|ref\|XP_007206137.1\|	2.8e-45	78.6	hypothetical protein PRUPE_ppa...	[more]
gi\|764596683\|ref\|XP_011466080.1\|	6.9e-44	72.8	PREDICTED: acyl carrier protei...	[more]
gi\|568853667\|ref\|XP_006480468.1\|	9.0e-44	76.7	PREDICTED: acyl carrier protei...	[more]

BLAST of Spo25816.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0K9QD69_SPIOL	1.3e-62	100.	Acyl carrier protein OS=Spinac...	[more]
A0A0J8CRR6_BETVU	4.1e-51	84.2	Acyl carrier protein OS=Beta v...	[more]
M5W1T8_PRUPE	1.9e-45	78.6	Acyl carrier protein OS=Prunus...	[more]
A0A059D2E0_EUCGR	4.1e-43	76.3	Acyl carrier protein OS=Eucaly...	[more]
B9IQ34_POPTR	6.9e-43	71.9	Acyl carrier protein OS=Populu...	[more]

BLAST of Spo25816.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
ACPM2_ARATH	5.5e-41	70.0	Acyl carrier protein 2, mitoch...	[more]
ACPM1_ARATH	3.1e-28	53.9	Acyl carrier protein 1, mitoch...	[more]
ACPM_NEUCR	7.7e-19	44.8	Acyl carrier protein, mitochon...	[more]
ACPM_SCHPO	2.9e-18	53.0	Putative acyl carrier protein,...	[more]
ACPM_MOUSE	6.1e-16	54.9	Acyl carrier protein, mitochon...	[more]

BLAST of Spo25816.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT1G65290.1	3.1e-42	70.0	mitochondrial acyl carrier pro...	[more]
AT2G44620.1	1.7e-29	53.9	mitochondrial acyl carrier pro...	[more]
AT5G47630.1	2.2e-16	39.6	mitochondrial acyl carrier pro...	[more]
AT3G05020.1	1.4e-7	38.0	acyl carrier protein 1	[more]
AT5G27200.1	3.2e-7	37.3	acyl carrier protein 5	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003231	Acyl carrier protein (ACP)	PRODOM	PD000887		coord: 90..125 score: 2.0
IPR003231	Acyl carrier protein (ACP)	HAMAP	MF_01217	Acyl_carrier	coord: 52..126 score: 17
IPR003231	Acyl carrier protein (ACP)	TIGRFAMs	TIGR00517	TIGR00517	coord: 51..125 score: 2.6
IPR006162	Phosphopantetheine attachment site	PROSITE	PS00012	PHOSPHOPANTETHEINE	coord: 81..96 scor
IPR009081	Phosphopantetheine binding ACP domain	GENE3D	1.10.1200.10		coord: 43..129 score: 1.5
IPR009081	Phosphopantetheine binding ACP domain	PFAM	PF00550	PP-binding	coord: 56..122 score: 1.3
IPR009081	Phosphopantetheine binding ACP domain	PROFILE	PS50075	ACP_DOMAIN	coord: 53..123 score: 14
IPR009081	Phosphopantetheine binding ACP domain	unknown	SSF47336	ACP-like	coord: 49..125 score: 3.66
None	No IPR available	PANTHER	PTHR20863	ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED	coord: 1..129 score: 1.0
None	No IPR available	PANTHER	PTHR20863:SF30	SUBFAMILY NOT NAMED	coord: 1..129 score: 1.0

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042335	cuticle development
biological_process	GO:0051301	cell division
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006020	inositol metabolic process
biological_process	GO:0006013	mannose metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0048825	cotyledon development
biological_process	GO:0042254	ribosome biogenesis
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006120	mitochondrial electron transport, NADH to ubiquinone
biological_process	GO:1902600	proton transmembrane transport
biological_process	GO:0006814	sodium ion transport
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0015976	carbon utilization
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006414	translational elongation
biological_process	GO:0006626	protein targeting to mitochondrion
biological_process	GO:0009409	response to cold
biological_process	GO:0000038	very long-chain fatty acid metabolic process
biological_process	GO:0000028	ribosomal small subunit assembly
biological_process	GO:0006412	translation
biological_process	GO:0071806	protein transmembrane transport
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005743	mitochondrial inner membrane
cellular_component	GO:0009941	chloroplast envelope
cellular_component	GO:0005840	ribosome
cellular_component	GO:0070469	respiratory chain
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005759	mitochondrial matrix
cellular_component	GO:0005742	mitochondrial outer membrane translocase complex
cellular_component	GO:0005774	vacuolar membrane
molecular_function	GO:0008137	NADH dehydrogenase (ubiquinone) activity
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0051539	4 iron, 4 sulfur cluster binding
molecular_function	GO:0015450	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004332	fructose-bisphosphate aldolase activity
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0050897	cobalt ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo25132	0.76	Barchart \| Table
Spo07821	0.69	Barchart \| Table
Spo05909	0.68	Barchart \| Table
Spo07016	0.68	Barchart \| Table
Spo07017	0.68	Barchart \| Table
Spo00968	0.67	Barchart \| Table
Spo05949	0.67	Barchart \| Table
Spo13561	0.67	Barchart \| Table
Spo25206	0.65	Barchart \| Table