Spo13459 (gene)

Overview
NameSpo13459
Typegene
OrganismSpinacia oleracea (Spinach)
Descriptionglycine-rich protein
Locationchr4 : 12713329 .. 12713790 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGAACATCAAAGCAACAAAAGTCACCTTCCTTCTTACACTTCTCATCATCACAACAATCTCTTCCTTAACCGGGGCAACCCGGTCCAACCCGAACTCTAAGGGCACCAAGTCCAAGTCCAAGGGTGGAGGTGCTGGTTTTGGTGGTGGTAGCGGCGATAGCGGTGACGACTTCTTCGGGCCGGGTGGTGGGTTTGGAATACCCGGGTACAATGACCCGGGAATGTTCGGAGGCGGATACGGATACGGATACGGCTCCCCTAGCGGAGGCCACGGAAAGAGTGGGACTGTAAGACCAAGTGTGGTTTGTAAGGAAACAGGTCCTTGTTATATGAAGAAACTCCGGTGCCCGGCAAAGTGCTTTTACTCCTTTAGTAGGGCCGGTAAGGGTTACGGTGGCGGAGGTGGTGGTGGTGGGTGCACCATGGATTGCAAGAAGAATTGTATTGCTTATTGTTGA

mRNA sequence

ATGATGAACATCAAAGCAACAAAAGTCACCTTCCTTCTTACACTTCTCATCATCACAACAATCTCTTCCTTAACCGGGGCAACCCGGTCCAACCCGAACTCTAAGGGCACCAAGTCCAAGTCCAAGGGTGGAGGTGCTGGTTTTGGTGGTGGTAGCGGCGATAGCGGTGACGACTTCTTCGGGCCGGGTGGTGGGTTTGGAATACCCGGGTACAATGACCCGGGAATGTTCGGAGGCGGATACGGATACGGATACGGCTCCCCTAGCGGAGGCCACGGAAAGAGTGGGACTGTAAGACCAAGTGTGGTTTGTAAGGAAACAGGTCCTTGTTATATGAAGAAACTCCGGTGCCCGGCAAAGTGCTTTTACTCCTTTAGTAGGGCCGGTAAGGGTTACGGTGGCGGAGGTGGTGGTGGTGGGTGCACCATGGATTGCAAGAAGAATTGTATTGCTTATTGTTGA

Coding sequence (CDS)

ATGATGAACATCAAAGCAACAAAAGTCACCTTCCTTCTTACACTTCTCATCATCACAACAATCTCTTCCTTAACCGGGGCAACCCGGTCCAACCCGAACTCTAAGGGCACCAAGTCCAAGTCCAAGGGTGGAGGTGCTGGTTTTGGTGGTGGTAGCGGCGATAGCGGTGACGACTTCTTCGGGCCGGGTGGTGGGTTTGGAATACCCGGGTACAATGACCCGGGAATGTTCGGAGGCGGATACGGATACGGATACGGCTCCCCTAGCGGAGGCCACGGAAAGAGTGGGACTGTAAGACCAAGTGTGGTTTGTAAGGAAACAGGTCCTTGTTATATGAAGAAACTCCGGTGCCCGGCAAAGTGCTTTTACTCCTTTAGTAGGGCCGGTAAGGGTTACGGTGGCGGAGGTGGTGGTGGTGGGTGCACCATGGATTGCAAGAAGAATTGTATTGCTTATTGTTGA

Protein sequence

MMNIKATKVTFLLTLLIITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDDFFGPGGGFGIPGYNDPGMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPAKCFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo13459.1Spo13459.1mRNA


Homology
BLAST of Spo13459.1 vs. NCBI nr
Match: gi|902146938|gb|KNA05117.1| (hypothetical protein SOVF_193250 [Spinacia oleracea])

HSP 1 Score: 297.7 bits (761), Expect = 1.100e-77
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1

		  

Query: 1   MMNIKATKVTFLLTLLIITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDDFF 60
           MMNIKATKVTFLLTLLIITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDDFF
Sbjct: 1   MMNIKATKVTFLLTLLIITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDDFF 60

Query: 61  GPGGGFGIPGYNDPGMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPAK 120
           GPGGGFGIPGYNDPGMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPAK
Sbjct: 61  GPGGGFGIPGYNDPGMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPAK 120

Query: 121 CFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC 154
           CFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC
Sbjct: 121 CFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC 153

BLAST of Spo13459.1 vs. NCBI nr
Match: gi|731369550|ref|XP_010696588.1| (PREDICTED: glycine-rich protein 2-like [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 214.9 bits (546), Expect = 9.600e-53
Identity = 117/155 (75.48%), Postives = 127/155 (81.94%), Query Frame = 1

		  

Query: 2   MNIKATKVTFLLTLL-IITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDDFF 61
           MN K TK TFL+ +L IITTISSL+GATR+ P SKGTK+K  GGG           DDFF
Sbjct: 1   MNTKVTKTTFLIFILVIITTISSLSGATRTYPTSKGTKAK--GGG-----------DDFF 60

Query: 62  GPGGGFGIPGYNDPGMFGGGYGYGYG--SPSGGHGKSGTVRPSVVCKETGPCYMKKLRCP 121
           G GGGFGIPG+NDPGMFGGGYGYGYG  SPSGGH KSGT+RPS+VCKE GPCYMKKL CP
Sbjct: 61  GSGGGFGIPGFNDPGMFGGGYGYGYGYGSPSGGHSKSGTIRPSMVCKEKGPCYMKKLMCP 120

Query: 122 AKCFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC 154
           AKCF SFSR+GKGYGGGGGGGGCTMDCKK C+AYC
Sbjct: 121 AKCFTSFSRSGKGYGGGGGGGGCTMDCKKKCVAYC 142

BLAST of Spo13459.1 vs. NCBI nr
Match: gi|703084978|ref|XP_010092614.1| (hypothetical protein L484_006376 [Morus notabilis])

HSP 1 Score: 161.4 bits (407), Expect = 1.300e-36
Identity = 91/145 (62.76%), Postives = 106/145 (73.10%), Query Frame = 1

		  

Query: 10  TFLLTLLIITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDD-FFGPGGGFGI 69
           +FLLTLL+IT++SSL+ + R  P S G  S    G  G   GS  + +  FFGPG GF I
Sbjct: 6   SFLLTLLLITSLSSLSLSAR--PGSDGPFSAELKGSKGSSPGSNSNNNGGFFGPGPGFNI 65

Query: 70  PGYNDPGMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPAKCFYSFSRA 129
           PG+ +   FGGGYGYGYG P GGH K G VRP+VVC + GPCY KKL CPAKCF S+SR+
Sbjct: 66  PGFGNGNGFGGGYGYGYGGPKGGHDKGGIVRPTVVCTDKGPCYKKKLTCPAKCFTSYSRS 125

Query: 130 GKGYGGGGGGGGCTMDCKKNCIAYC 154
           GKGYGGGGGGGGCTMDCKK C+AYC
Sbjct: 126 GKGYGGGGGGGGCTMDCKKKCVAYC 148

BLAST of Spo13459.1 vs. NCBI nr
Match: gi|351721048|ref|NP_001235149.1| (uncharacterized protein LOC100499725 precursor [Glycine max])

HSP 1 Score: 159.1 bits (401), Expect = 6.300e-36
Identity = 90/154 (58.44%), Postives = 109/154 (70.78%), Query Frame = 1

		  

Query: 4   IKATKVTFLLTLLIITTISSLTGATRSNPNS-KGTKSKSKGGGAGFGGGSGDSGDDFFGP 63
           +K T    LL+LL++ T  SL     SNP+  K  K+ ++GGGAG G G       FFGP
Sbjct: 21  MKPTITILLLSLLLLITSPSLATRPASNPDQVKHNKNNNQGGGAGAGAGG------FFGP 80

Query: 64  GGGFGIPGYNDP---GMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPA 123
           GGGF IPG+ +    G+ GGGYG GYG P+GG  K G +RP+VVCK+ GPC+ KK+ CPA
Sbjct: 81  GGGFSIPGFGNGFGNGIIGGGYGSGYGGPNGGSSKGGIIRPTVVCKDKGPCFQKKVTCPA 140

Query: 124 KCFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC 154
           KCF SFSR+GKGYGGGGGGGGCT+DCKK CIAYC
Sbjct: 141 KCFSSFSRSGKGYGGGGGGGGCTIDCKKKCIAYC 168

BLAST of Spo13459.1 vs. NCBI nr
Match: gi|734337635|gb|KHN08572.1| (hypothetical protein glysoja_014337 [Glycine soja])

HSP 1 Score: 157.9 bits (398), Expect = 1.400e-35
Identity = 89/154 (57.79%), Postives = 109/154 (70.78%), Query Frame = 1

		  

Query: 4   IKATKVTFLLTLLIITTISSLTGATRSNPNS-KGTKSKSKGGGAGFGGGSGDSGDDFFGP 63
           +K T    LL+LL++ T  SL     SNP+  K  K+ ++GGGAG G G       FFGP
Sbjct: 21  MKPTITILLLSLLLLITSPSLATRPASNPDQVKHNKNNNQGGGAGAGAGG------FFGP 80

Query: 64  GGGFGIPGYNDP---GMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPA 123
           GGGF IPG+ +    G+ GGGYG GYG P+GG  K G +RP+V+CK+ GPC+ KK+ CPA
Sbjct: 81  GGGFSIPGFGNGFGNGIIGGGYGSGYGGPNGGSSKGGIIRPTVLCKDKGPCFQKKVTCPA 140

Query: 124 KCFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC 154
           KCF SFSR+GKGYGGGGGGGGCT+DCKK CIAYC
Sbjct: 141 KCFSSFSRSGKGYGGGGGGGGCTIDCKKKCIAYC 168

BLAST of Spo13459.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCX8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193250 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 7.900e-78
Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 1

		  

Query: 1   MMNIKATKVTFLLTLLIITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDDFF 60
           MMNIKATKVTFLLTLLIITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDDFF
Sbjct: 1   MMNIKATKVTFLLTLLIITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDDFF 60

Query: 61  GPGGGFGIPGYNDPGMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPAK 120
           GPGGGFGIPGYNDPGMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPAK
Sbjct: 61  GPGGGFGIPGYNDPGMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPAK 120

Query: 121 CFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC 154
           CFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC
Sbjct: 121 CFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC 153

BLAST of Spo13459.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BA53_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_8g199550 PE=4 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 6.700e-53
Identity = 117/155 (75.48%), Postives = 127/155 (81.94%), Query Frame = 1

		  

Query: 2   MNIKATKVTFLLTLL-IITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDDFF 61
           MN K TK TFL+ +L IITTISSL+GATR+ P SKGTK+K  GGG           DDFF
Sbjct: 1   MNTKVTKTTFLIFILVIITTISSLSGATRTYPTSKGTKAK--GGG-----------DDFF 60

Query: 62  GPGGGFGIPGYNDPGMFGGGYGYGYG--SPSGGHGKSGTVRPSVVCKETGPCYMKKLRCP 121
           G GGGFGIPG+NDPGMFGGGYGYGYG  SPSGGH KSGT+RPS+VCKE GPCYMKKL CP
Sbjct: 61  GSGGGFGIPGFNDPGMFGGGYGYGYGYGSPSGGHSKSGTIRPSMVCKEKGPCYMKKLMCP 120

Query: 122 AKCFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC 154
           AKCF SFSR+GKGYGGGGGGGGCTMDCKK C+AYC
Sbjct: 121 AKCFTSFSRSGKGYGGGGGGGGCTMDCKKKCVAYC 142

BLAST of Spo13459.1 vs. UniProtKB/TrEMBL
Match: W9QRB6_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_006376 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 8.800e-37
Identity = 91/145 (62.76%), Postives = 106/145 (73.10%), Query Frame = 1

		  

Query: 10  TFLLTLLIITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDD-FFGPGGGFGI 69
           +FLLTLL+IT++SSL+ + R  P S G  S    G  G   GS  + +  FFGPG GF I
Sbjct: 6   SFLLTLLLITSLSSLSLSAR--PGSDGPFSAELKGSKGSSPGSNSNNNGGFFGPGPGFNI 65

Query: 70  PGYNDPGMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPAKCFYSFSRA 129
           PG+ +   FGGGYGYGYG P GGH K G VRP+VVC + GPCY KKL CPAKCF S+SR+
Sbjct: 66  PGFGNGNGFGGGYGYGYGGPKGGHDKGGIVRPTVVCTDKGPCYKKKLTCPAKCFTSYSRS 125

Query: 130 GKGYGGGGGGGGCTMDCKKNCIAYC 154
           GKGYGGGGGGGGCTMDCKK C+AYC
Sbjct: 126 GKGYGGGGGGGGCTMDCKKKCVAYC 148

BLAST of Spo13459.1 vs. UniProtKB/TrEMBL
Match: C6SVW2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_13G244800 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 4.400e-36
Identity = 90/154 (58.44%), Postives = 109/154 (70.78%), Query Frame = 1

		  

Query: 4   IKATKVTFLLTLLIITTISSLTGATRSNPNS-KGTKSKSKGGGAGFGGGSGDSGDDFFGP 63
           +K T    LL+LL++ T  SL     SNP+  K  K+ ++GGGAG G G       FFGP
Sbjct: 21  MKPTITILLLSLLLLITSPSLATRPASNPDQVKHNKNNNQGGGAGAGAGG------FFGP 80

Query: 64  GGGFGIPGYNDP---GMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPA 123
           GGGF IPG+ +    G+ GGGYG GYG P+GG  K G +RP+VVCK+ GPC+ KK+ CPA
Sbjct: 81  GGGFSIPGFGNGFGNGIIGGGYGSGYGGPNGGSSKGGIIRPTVVCKDKGPCFQKKVTCPA 140

Query: 124 KCFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC 154
           KCF SFSR+GKGYGGGGGGGGCT+DCKK CIAYC
Sbjct: 141 KCFSSFSRSGKGYGGGGGGGGCTIDCKKKCIAYC 168

BLAST of Spo13459.1 vs. UniProtKB/TrEMBL
Match: A0A0B2PLW1_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_014337 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 9.700e-36
Identity = 89/154 (57.79%), Postives = 109/154 (70.78%), Query Frame = 1

		  

Query: 4   IKATKVTFLLTLLIITTISSLTGATRSNPNS-KGTKSKSKGGGAGFGGGSGDSGDDFFGP 63
           +K T    LL+LL++ T  SL     SNP+  K  K+ ++GGGAG G G       FFGP
Sbjct: 21  MKPTITILLLSLLLLITSPSLATRPASNPDQVKHNKNNNQGGGAGAGAGG------FFGP 80

Query: 64  GGGFGIPGYNDP---GMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPA 123
           GGGF IPG+ +    G+ GGGYG GYG P+GG  K G +RP+V+CK+ GPC+ KK+ CPA
Sbjct: 81  GGGFSIPGFGNGFGNGIIGGGYGSGYGGPNGGSSKGGIIRPTVLCKDKGPCFQKKVTCPA 140

Query: 124 KCFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC 154
           KCF SFSR+GKGYGGGGGGGGCT+DCKK CIAYC
Sbjct: 141 KCFSSFSRSGKGYGGGGGGGGCTIDCKKKCIAYC 168

BLAST of Spo13459.1 vs. TAIR (Arabidopsis)
Match: AT4G21620.1 (glycine-rich protein)

HSP 1 Score: 134.4 bits (337), Expect = 5.800e-32
Identity = 86/147 (58.50%), Postives = 93/147 (63.27%), Query Frame = 1

		  

Query: 7   TKVTFLLTLLIITTISSLTGATRSNPNSKGTKSKSKGGGAGFGGGSGDSGDDFFGPGGGF 66
           TK   L +LLII  +S+   A          + KS   G GFGG  G      F PG G 
Sbjct: 3   TKSILLASLLIIILVSATESA----------RQKSGNDGLGFGGVPGSG----FIPGFGN 62

Query: 67  GIPGYNDPGMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPAKCFYSFS 126
           G PG       GGGYG G+G PSGG GK G VRP+V CKE GPC  KKLRCPAKCF SFS
Sbjct: 63  GFPGTG----VGGGYGGGFGGPSGGFGKGGVVRPTVTCKEKGPCNGKKLRCPAKCFKSFS 122

Query: 127 RAGKGYGGGGGGGGCTMDCKKNCIAYC 154
           R+GKGYGGGGGGGGCTMDCKK CIAYC
Sbjct: 123 RSGKGYGGGGGGGGCTMDCKKKCIAYC 131

BLAST of Spo13459.1 vs. TAIR (Arabidopsis)
Match: AT1G61255.1 (BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G21620.2))

HSP 1 Score: 84.0 bits (206), Expect = 9.000e-17
Identity = 71/153 (46.41%), Postives = 86/153 (56.21%), Query Frame = 1

		  

Query: 6   ATKVTFLLTLLIIT-TISSLTGATRSNPNSKGTKS----KSKGGGAGFGGGSGDSGDDFF 65
           ATK+  L T+L++T T+S    A   + +S G+ S    K        G GSG       
Sbjct: 2   ATKLNLLFTILLLTLTLSHSRPARPESSSSTGSYSDQLKKHSKDNYNKGYGSGGYPGLTT 61

Query: 66  GPGGGFGIPGYNDPGMFGGGYGYGYGSPSGGHGKSGTVRPSVVCKETGPCYMKKLRCPAK 125
            P  GF +PG         G G  Y   SGG+ K   VR +V+C+E G CYMKKL CPAK
Sbjct: 62  EPATGFILPG--------SGPGGSYSELSGGYSKGRGVRLTVMCEEKGHCYMKKLTCPAK 121

Query: 126 CFYSFSRAGKGYGGGGGGGGCTMDCKKNCIAYC 154
           CF S SR GKGY  GGGGGGCT+DCKK C+AYC
Sbjct: 122 CFKSLSRKGKGY--GGGGGGCTIDCKK-CVAYC 143

The following BLAST results are available for this feature:
BLAST of Spo13459.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902146938|gb|KNA05117.1|1.1e-77100.hypothetical protein SOVF_1932... [more]
gi|731369550|ref|XP_010696588.1|9.6e-5375.4PREDICTED: glycine-rich protei... [more]
gi|703084978|ref|XP_010092614.1|1.3e-3662.7hypothetical protein L484_0063... [more]
gi|351721048|ref|NP_001235149.1|6.3e-3658.4uncharacterized protein LOC100... [more]
gi|734337635|gb|KHN08572.1|1.4e-3557.7hypothetical protein glysoja_0... [more]
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BLAST of Spo13459.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9QCX8_SPIOL7.9e-78100.Uncharacterized protein OS=Spi... [more]
A0A0J8BA53_BETVU6.7e-5375.4Uncharacterized protein OS=Bet... [more]
W9QRB6_9ROSA8.8e-3762.7Uncharacterized protein OS=Mor... [more]
C6SVW2_SOYBN4.4e-3658.4Uncharacterized protein OS=Gly... [more]
A0A0B2PLW1_GLYSO9.7e-3657.7Uncharacterized protein OS=Gly... [more]
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BLAST of Spo13459.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo13459.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2
Match NameE-valueIdentityDescription
AT4G21620.15.8e-3258.5glycine-rich protein[more]
AT1G61255.19.0e-1746.4BEST Arabidopsis thaliana prot... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34789FAMILY NOT NAMEDcoord: 3..153
score: 8.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0005975 carbohydrate metabolic process
biological_process GO:0006412 translation
biological_process GO:0006766 vitamin metabolic process
biological_process GO:0001510 RNA methylation
biological_process GO:0051788 response to misfolded protein
biological_process GO:0009735 response to cytokinin
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0009853 photorespiration
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0043248 proteasome assembly
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0019748 secondary metabolic process
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0030001 metal ion transport
biological_process GO:0006810 transport
biological_process GO:0046777 protein autophosphorylation
biological_process GO:0009069 serine family amino acid metabolic process
biological_process GO:0006606 protein import into nucleus
biological_process GO:0006887 exocytosis
biological_process GO:0007165 signal transduction
biological_process GO:0006636 unsaturated fatty acid biosynthetic process
biological_process GO:0009249 protein lipoylation
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0009965 leaf morphogenesis
biological_process GO:0009695 jasmonic acid biosynthetic process
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006546 glycine catabolic process
biological_process GO:0019344 cysteine biosynthetic process
biological_process GO:0015995 chlorophyll biosynthetic process
biological_process GO:0030154 cell differentiation
biological_process GO:0009073 aromatic amino acid family biosynthetic process
biological_process GO:0006733 oxidoreduction coenzyme metabolic process
biological_process GO:0080090 regulation of primary metabolic process
biological_process GO:0009058 biosynthetic process
biological_process GO:0060255 regulation of macromolecule metabolic process
biological_process GO:0031323 regulation of cellular metabolic process
biological_process GO:0015031 protein transport
biological_process GO:0009657 plastid organization
biological_process GO:0034660 ncRNA metabolic process
biological_process GO:0009987 cellular process
biological_process GO:0044085 cellular component biogenesis
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0008643 carbohydrate transport
biological_process GO:0008152 metabolic process
biological_process GO:0015991 ATP hydrolysis coupled proton transport
biological_process GO:0080167 response to karrikin
biological_process GO:0009651 response to salt stress
biological_process GO:0016120 carotene biosynthetic process
biological_process GO:0043631 RNA polyadenylation
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006096 glycolytic process
biological_process GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process
biological_process GO:0046686 response to cadmium ion
biological_process GO:0009790 embryo development
biological_process GO:0051301 cell division
biological_process GO:0009407 toxin catabolic process
biological_process GO:0010103 stomatal complex morphogenesis
biological_process GO:0009088 threonine biosynthetic process
biological_process GO:0016310 phosphorylation
biological_process GO:0009089 lysine biosynthetic process via diaminopimelate
biological_process GO:0006563 L-serine metabolic process
biological_process GO:0006544 glycine metabolic process
biological_process GO:0006506 GPI anchor biosynthetic process
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0044070 regulation of anion transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0009765 photosynthesis, light harvesting
biological_process GO:0016123 xanthophyll biosynthetic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006508 proteolysis
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0042545 cell wall modification
biological_process GO:0006465 signal peptide processing
biological_process GO:0009932 cell tip growth
biological_process GO:0006635 fatty acid beta-oxidation
biological_process GO:0048193 Golgi vesicle transport
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0042967 obsolete acyl-carrier-protein biosynthetic process
biological_process GO:0016558 protein import into peroxisome matrix
biological_process GO:0006623 protein targeting to vacuole
biological_process GO:0006897 endocytosis
biological_process GO:0006909 phagocytosis
biological_process GO:0009107 lipoate biosynthetic process
cellular_component GO:0005839 proteasome core complex
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005759 mitochondrial matrix
cellular_component GO:0000502 proteasome complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0030659 cytoplasmic vesicle membrane
cellular_component GO:0005768 endosome
cellular_component GO:0033179 proton-transporting V-type ATPase, V0 domain
cellular_component GO:0000145 exocyst
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0005576 extracellular region
cellular_component GO:0042651 thylakoid membrane
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0032991 protein-containing complex
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009524 phragmoplast
cellular_component GO:0005634 nucleus
cellular_component GO:0005829 cytosol
cellular_component GO:0005737 cytoplasm
cellular_component GO:0031969 chloroplast membrane
cellular_component GO:0005730 nucleolus
cellular_component GO:0005665 DNA-directed RNA polymerase II, core complex
cellular_component GO:0019773 proteasome core complex, alpha-subunit complex
cellular_component GO:0005856 cytoskeleton
cellular_component GO:0005840 ribosome
cellular_component GO:0005886 plasma membrane
cellular_component GO:0009507 chloroplast
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005749 mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone)
cellular_component GO:0005618 cell wall
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0009506 plasmodesma
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016020 membrane
molecular_function GO:0019706 protein-cysteine S-palmitoyltransferase activity
molecular_function GO:0000035 acyl binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0005515 protein binding
molecular_function GO:0004072 aspartate kinase activity
molecular_function GO:0016597 amino acid binding
molecular_function GO:0005351 carbohydrate:proton symporter activity
molecular_function GO:0004519 endonuclease activity
molecular_function GO:0016758 transferase activity, transferring hexosyl groups
molecular_function GO:0004652 polynucleotide adenylyltransferase activity
molecular_function GO:0003677 DNA binding
molecular_function GO:0045435 lycopene epsilon cyclase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0046872 metal ion binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0016992 lipoate synthase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0008236 serine-type peptidase activity
molecular_function GO:0004298 threonine-type endopeptidase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008233 peptidase activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function GO:0008565 protein transporter activity
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0004683 calmodulin-dependent protein kinase activity
molecular_function GO:0042626 ATPase activity, coupled to transmembrane movement of substances
molecular_function GO:0004190 aspartic-type endopeptidase activity
molecular_function GO:0015078 proton transmembrane transporter activity
molecular_function GO:0003899 DNA-directed 5'-3' RNA polymerase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0008308 voltage-gated anion channel activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo246250.83Barchart | Table
Spo141940.83Barchart | Table
Spo008980.82Barchart | Table
Spo122530.82Barchart | Table
Spo146870.82Barchart | Table
Spo009360.81Barchart | Table
Spo050290.81Barchart | Table
Spo036180.81Barchart | Table
Spo148490.80Barchart | Table
Spo192060.78Barchart | Table
Spo144410.78Barchart | Table
Spo019140.77Barchart | Table
Spo121280.73Barchart | Table
Spo122020.72Barchart | Table
Spo156030.72Barchart | Table
Spo121760.72Barchart | Table
Spo117330.71Barchart | Table
Spo167860.71Barchart | Table
Spo020850.69Barchart | Table
Spo066810.69Barchart | Table
Spo068050.69Barchart | Table
Spo019290.69Barchart | Table
Spo258560.69Barchart | Table
Spo085400.69Barchart | Table
Spo271020.69Barchart | Table
Spo036080.68Barchart | Table
Spo049230.68Barchart | Table
Spo206770.68Barchart | Table
Spo231230.68Barchart | Table
Spo181030.68Barchart | Table
Spo098030.68Barchart | Table
Spo170160.68Barchart | Table
Spo239080.68Barchart | Table
Spo200710.68Barchart | Table
Spo096740.67Barchart | Table
Spo003360.67Barchart | Table
Spo021070.67Barchart | Table
Spo052280.67Barchart | Table
Spo055310.67Barchart | Table
Spo090150.67Barchart | Table
Spo126630.67Barchart | Table
Spo129420.67Barchart | Table
Spo135790.67Barchart | Table
Spo169450.67Barchart | Table
Spo172160.67Barchart | Table
Spo172680.67Barchart | Table
Spo181940.67Barchart | Table
Spo160700.66Barchart | Table
Spo121520.66Barchart | Table
Spo254450.66Barchart | Table
Spo110980.66Barchart | Table
Spo258810.66Barchart | Table
Spo001750.66Barchart | Table
Spo006150.66Barchart | Table
Spo184510.66Barchart | Table
Spo060300.66Barchart | Table
Spo231480.66Barchart | Table
Spo144380.66Barchart | Table
Spo140080.66Barchart | Table
Spo123940.66Barchart | Table
Spo012040.65Barchart | Table
Spo027310.65Barchart | Table
Spo173720.65Barchart | Table
Spo131790.65Barchart | Table
Spo019980.65Barchart | Table
Spo013570.65Barchart | Table
Spo248570.65Barchart | Table
Spo040570.65Barchart | Table
Spo033060.65Barchart | Table