Spo20935 (gene)

Overview
NameSpo20935
Typegene
OrganismSpinacia oleracea (Spinach)
Description60S ribosomal protein L31
Locationchr4 : 17123074 .. 17126390 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAAGATAGAGAAATTAATAGATCTAGCTCTATATATATGGATTTCAAGGATAGGCGCTGGTTTGTGTTGAAGGGGTGTAAAAGGAATCTATTTATAGAGTGATGTTGAAACATTGTATTAATTGTTGCGATGTAACTCTCAAATTTATCTACATATTCCTTTAATTTGTATATAAACAACATTTGACAAGAAAATGGCTTTAGAAGCTTATTTACTAAGTATAGCATGATTTGTCTTGTTGGACTGGCTGTGCCATGCCTTGTCGTGTTTCTTCCAAAAAATACAGTCTATGCCCGACCCATGACTTTGTGCCCGTGTCTAAGCGTATTTTTTCGTGTCTTGTCAGCCCGACCCATCCCATCCCATCCCACAACCATATTTTTTTTCTTGTCGTGCCAGTCGGACTATACGAGTAACCACTAACCAGCTAGTTGACCCGACACAACAACGACTCACCCAACCCCGACCCGACCCCAACTGAAAACCGCATTTGACAACTTGAGTTTATGTTTAACAAACTTTTTACAGCTGAACAGAAAACAGGCCCTTTATTTACAAAGCCCAATTTAAAAGCCGCCCAGAAAAGCCCAAAAGAGGCCACTAGGGTTTTTCAGAAACTTATACCCCAGCCTCCCACATTTTTATACTAACCCTTTCTTCTTTCCTCAACTCTCTGCCCCCCTCTCCATTTTGCCGTCGACCAAGGTTTTTCTCTCTCCTCTTCAACTTCATCGTTCTCTCTAATTTATGTAGATTCAATCGGCAAATCACAAGTTATTAACGAACTGTAATTTGTTTGATGATTGCAGGAAGGTAGGTTTGTTTTAGGGCAAAGCAAAAAAAACAGCGAAAATGGTTGAGCAAACTAAGGGACGAAAGGAAGAGGTTGTGACTCGGGAGTACACCATCAACCTACACAAGCGTCTTCATGGATGGTAGATTTCTCTCTCTTCATCTTAATTTGGTTCTGATTCTACCAACTGTGATTTTTGAATTGGGGTTTTTGATTTAGGGTTCTATTATTTATCAAATGTTGGTAACAATTTGGGATTTTTTATAGTTTGTACGATTTATATTATTGAAATGCTAGGTTTTTGGATGAAAATCGTTATTCTTGATCTGAAATTATTCGAGCATTCATCTAATGTTCGTGTCGATGTATTGTGGTCTATGATTATGTTTTCTCCGTGTTTTTTTGTTGATAGATTGAGATTTCTAAGTTTCTGTGGTGGATCTAAGTTGCTAATGGTCATTGTGGTGTGCCTTCAATGCTAATATCTACTGTTTTATAATAATGTGTGTTTTGTGGTTATGTTTGGTTTGTGGAATAACACGTTGCATGAAATTCATATTAGCATTGGTGCTATAAAATTATGAACCTTTGTATGGTAACTGATTTTAGTGTATTTTCCTAACAAACTCAGGTCAAGTTTTGTAATATGGTATGAGTTTTCATAAACTTTGCTTTAGCTTTGAATATCTAGGGTTAACTTTACAATTTAATGCTTAGATTTTGCTTTGCTCAATGGGCTTGTGGAAGGGAGTGTTTGAGTGGCGTTGAGCTACTATCCTATCATCTCAACATTCATATATTTTTCTACGAATAAAAGGACTAAGTCTACCCTTGATAGTTTGAATGTATAACTTGGTTAATTTCTATCTTCTAAAGTAGCTTTCATAACAGTCTTTCTTCATAATTAGAAAGTTGTGTATACCTGGTGTGCAAAGTAAGAAAAAGAGAAATTCATGTGGTTTCTAGCACCCTAGTGAAGTTATAATGCTAATGTTAGTGGTGTGGTACTAACACTGTGGAATTAGAGGGTTGACAGATTAACTATAAGGTCATGTGTAGAGCTCTTCAGTGTTGCTTTCCTCCTATCAAATAAAGACCCTGCACTCCTGACGTGTCGATCTCTCTGAAATGGAAATTGATTTACGCACAACTATTATGGCTTTATCTTCCTTGGATACTAGGTTCTTACGAGTAATATCAAATCATGCATTTAACTCTTGTTATAGTCTATCTATGTTCTGTTTGCATAGATACATGGTTCTTACGAGTAATATCAAATCATGCATTTAACTCTTTGTTATAGTCTATCTATGTTCTGTTTGCATAGCTGTGGCTTAGGACTTGGGTATATAGATTTTGTTTAGTGGGTCACTTACATGTACAAGACTACAAGTGCCATCTATTGTCATTGTAAGTGTTATCTTTCTTTTTTTGGCTTTTGACATTTTAGTTTATCTCTACTCTTATCTTGATTTTCTTTAATGATCATGGACAAGTAGTTTAGCTTATCGAGTGTATTGTTTTATGTTTATCATAATTTTGTTAGCTAATTAGGTGTATTGTTACGTGTTAATCATAATTGTGAAATTGCAATGTAACTAGTGAGTCATGTTTTGATCATCAGTTCACTAATTTCTGTTGCAACTTCAATTCTGGCAGCACCTTCAAGAAGAAGGCACCAAATGCCATCAAGGAAATCAGAACTTTCGCCAAGAAGGCAATGGGAACCAATGATGTTAGAGTAGACGTGAAGCTTAACAAGCAAATCTGGAGCAGGGGAATCAGGAGTGTTCCAAGGAGAATCCGTGTTCGCATTGCTCGCAAGAGAAATGATGACGAGGATGCCAAGGAAGAGCTTTACTCTTTGGTGACTGTTGCTGAAATTCCAGCTGAAGGTTTGAAGGGTCTTGGTACTAAGGTTATTGAAGACGAAGATTAAGCAATTAAGTTCTTCTTGAGATTTTACTAGATAGTTTGCACTTTGTTTTAAAGGCTTTTTTGAACAATAGAAGGTATTTTGGTGATGTTTATTGCAGTGAGATGGTCACAAGATATGAATTTTGATTTTGTTTTGTTAGTAATGACACCTATTATCCTTCGAAATTGAAACATGTATGACTTGCAATTTTGCTGTTTTTACGTTGATTTTTATTAACTGAATTTTTGAAGTGCCATACTGAATTTCTGACTATAATGACTAGCTGGGTTTGCCTTCCCGCTCTCTTTGATACAGTGGCTGCTGTTTTAGGTGGTGTTATTTTCTTAGTTTGTGTTGATTTAAAAATATGAAAAGAAATCAGAGGCTATATTTTTGTTGTCGAGCATAGTCTGTAATTTTCTGAATTTCAAGTCATTAGAAGTTCAAGATTAGGTGACCAGGAACAGGCGTGCTGTTTATATATTTACCTGAAAACAGAATCACAGATAAGAAATCACAAAATTACATTATTTTTGCCTGCCCCTGATGCCTTAGTATAGTACAATTTATTCCTACCCTTTTATACGAGGAGGAGAGGCC

mRNA sequence

ATGGTGAAAGATAGAGAAATTAATAGATCTAGCTCTATATATATGGATTTCAAGGATAGGCGCTGCCTCCCACATTTTTATACTAACCCTTTCTTCTTTCCTCAACTCTCTGCCCCCCTCTCCATTTTGCCGTCGACCAAGGGCAAAGCAAAAAAAACAGCGAAAATGGTTGAGCAAACTAAGGGACGAAAGGAAGAGGTTGTGACTCGGGAGTACACCATCAACCTACACAAGCGTCTTCATGGATGCACCTTCAAGAAGAAGGCACCAAATGCCATCAAGGAAATCAGAACTTTCGCCAAGAAGGCAATGGGAACCAATGATGTTAGAGTAGACGTGAAGCTTAACAAGCAAATCTGGAGCAGGGGAATCAGGAGTGTTCCAAGGAGAATCCGTGTTCGCATTGCTCGCAAGAGAAATGATGACGAGGATGCCAAGGAAGAGCTTTACTCTTTGGTGACTGTTGCTGAAATTCCAGCTGAAGGTTTGAAGGGTCTTGGTACTAAGGTTATTGAAGACGAAGATTAAGCAATTAAGTTCTTCTTGAGATTTTACTAGATAGTTTGCACTTTGTTTTAAAGGCTTTTTTGAACAATAGAAGGTATTTTGGTGATGTTTATTGCAGTGAGATGGTCACAAGATATGAATTTTGATTTTGTTTTGTTAGTAATGACACCTATTATCCTTCGAAATTGAAACATGTATGACTTGCAATTTTGCTGTTTTTACGTTGATTTTTATTAACTGAATTTTTGAAGTGCCATACTGAATTTCTGACTATAATGACTAGCTGGGTTTGCCTTCCCGCTCTCTTTGATACAGTGGCTGCTGTTTTAGGTGGTGTTATTTTCTTAGTTTGTGTTGATTTAAAAATATGAAAAGAAATCAGAGGCTATATTTTTGTTGTCGAGCATAGTCTGTAATTTTCTGAATTTCAAGTCATTAGAAGTTCAAGATTAGGTGACCAGGAACAGGCGTGCTGTTTATATATTTACCTGAAAACAGAATCACAGATAAGAAATCACAAAATTACATTATTTTTGCCTGCCCCTGATGCCTTAGTATAGTACAATTTATTCCTACCCTTTTATACGAGGAGGAGAGGCC

Coding sequence (CDS)

ATGGTGAAAGATAGAGAAATTAATAGATCTAGCTCTATATATATGGATTTCAAGGATAGGCGCTGCCTCCCACATTTTTATACTAACCCTTTCTTCTTTCCTCAACTCTCTGCCCCCCTCTCCATTTTGCCGTCGACCAAGGGCAAAGCAAAAAAAACAGCGAAAATGGTTGAGCAAACTAAGGGACGAAAGGAAGAGGTTGTGACTCGGGAGTACACCATCAACCTACACAAGCGTCTTCATGGATGCACCTTCAAGAAGAAGGCACCAAATGCCATCAAGGAAATCAGAACTTTCGCCAAGAAGGCAATGGGAACCAATGATGTTAGAGTAGACGTGAAGCTTAACAAGCAAATCTGGAGCAGGGGAATCAGGAGTGTTCCAAGGAGAATCCGTGTTCGCATTGCTCGCAAGAGAAATGATGACGAGGATGCCAAGGAAGAGCTTTACTCTTTGGTGACTGTTGCTGAAATTCCAGCTGAAGGTTTGAAGGGTCTTGGTACTAAGGTTATTGAAGACGAAGATTAA

Protein sequence

MVKDREINRSSSIYMDFKDRRCLPHFYTNPFFFPQLSAPLSILPSTKGKAKKTAKMVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLNKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo20935.1Spo20935.1mRNA


Homology
[Close]
BLAST of Spo20935.1 vs. NCBI nr
Match: gi|902225832|gb|KNA20207.1| (hypothetical protein SOVF_054480 [Spinacia oleracea])

HSP 1 Score: 235.3 bits (599), Expect = 7.900e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

		  

Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL
Sbjct: 1   MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 120
[Close]
BLAST of Spo20935.1 vs. NCBI nr
Match: gi|470102129|ref|XP_004287511.1| (PREDICTED: 60S ribosomal protein L31 [Fragaria vesca subsp. vesca])

HSP 1 Score: 225.7 bits (574), Expect = 6.200e-56
Identity = 114/120 (95.00%), Postives = 119/120 (99.17%), Query Frame = 1 

		  

Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVVTRE+TINLHKRLHGCTFKKKAPNAIKEIR FA+KAMGTNDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREFTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIE++D
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEEDD 120
[Close]
BLAST of Spo20935.1 vs. NCBI nr
Match: gi|731327320|ref|XP_010674463.1| (PREDICTED: 60S ribosomal protein L31 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 225.7 bits (574), Expect = 6.200e-56
Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 1 

		  

Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAP AIK+IR FA+KAMGT DVRVDVKL
Sbjct: 1   MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKQIREFAEKAMGTKDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 120
[Close]
BLAST of Spo20935.1 vs. NCBI nr
Match: gi|595808464|ref|XP_007202764.1| (hypothetical protein PRUPE_ppa013471mg [Prunus persica])

HSP 1 Score: 225.3 bits (573), Expect = 8.100e-56
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 1 

		  

Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIR FA+KAMGTNDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGL GLGTKVIE++D
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLSGLGTKVIEEDD 120
[Close]
BLAST of Spo20935.1 vs. NCBI nr
Match: gi|694323018|ref|XP_009352600.1| (PREDICTED: 60S ribosomal protein L31 [Pyrus x bretschneideri])

HSP 1 Score: 225.3 bits (573), Expect = 8.100e-56
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 1 

		  

Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIR FAKKAMGTNDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAKKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGL GLGTKVIE+++
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLSGLGTKVIEEDE 120
[Close]
BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RMZ6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_054480 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 5.500e-59
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 1 

		  

Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL
Sbjct: 1   MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 120
[Close]
BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CQ15_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g079270 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 4.300e-56
Identity = 115/120 (95.83%), Postives = 117/120 (97.50%), Query Frame = 1 

		  

Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAP AIK+IR FA+KAMGT DVRVDVKL
Sbjct: 1   MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPKAIKQIREFAEKAMGTKDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 120
[Close]
BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
Match: M5W3Y3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013471mg PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 5.700e-56
Identity = 114/120 (95.00%), Postives = 118/120 (98.33%), Query Frame = 1 

		  

Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIR FA+KAMGTNDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGL GLGTKVIE++D
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLSGLGTKVIEEDD 120
[Close]
BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
Match: W9QLF2_9ROSA (60S ribosomal protein L31 OS=Morus notabilis GN=L484_005476 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 7.400e-56
Identity = 114/119 (95.80%), Postives = 117/119 (98.32%), Query Frame = 1 

		  

Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIR FA+KAMGTNDVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTNDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDE 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIP EGLKGLGTKVIE+E
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPTEGLKGLGTKVIEEE 119
[Close]
BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
Match: M0ZHK6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400000345 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 6.300e-55
Identity = 112/120 (93.33%), Postives = 117/120 (97.50%), Query Frame = 1 

		  

Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVV+REYTINLHKRLHGCTFKKKAP AIKEIR FA+KAMGT DVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVSREYTINLHKRLHGCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTK+IEDE+
Sbjct: 61  NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKIIEDEE 120
[Close]
BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
Match: RL31_NICGU (60S ribosomal protein L31 OS=Nicotiana glutinosa GN=RPL31 PE=2 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 1.400e-55
Identity = 109/120 (90.83%), Postives = 115/120 (95.83%), Query Frame = 1 

		  

Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           M ++TKGRKEEVVTREYTINLHKRLH CTFKKKAP AIKEIR FA+KAMGT DVRVDVKL
Sbjct: 1   MSDKTKGRKEEVVTREYTINLHKRLHSCTFKKKAPTAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVAEIPA+GLKGLGTK+IEDED
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAEIPAKGLKGLGTKIIEDED 120
[Close]
BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
Match: RL31_PANGI (60S ribosomal protein L31 OS=Panax ginseng GN=RPL31 PE=2 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 2.600e-54
Identity = 107/120 (89.17%), Postives = 115/120 (95.83%), Query Frame = 1 

		  

Query: 56  MVEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKL 115
           MVE+TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIR FA+KAMGT DVRVDVKL
Sbjct: 1   MVEKTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRKFAQKAMGTKDVRVDVKL 60

Query: 116 NKQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 175
           NKQIWSRGIRSVPRR+RVRIARKRNDDEDAKEELYSLVTVA+IPA  LKGLG ++IE++D
Sbjct: 61  NKQIWSRGIRSVPRRVRVRIARKRNDDEDAKEELYSLVTVAKIPAGTLKGLGPQIIEEDD 120
[Close]
BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
Match: RL311_ARATH (60S ribosomal protein L31-1 OS=Arabidopsis thaliana GN=RPL31A PE=3 SV=1)

HSP 1 Score: 203.8 bits (517), Expect = 1.600e-51
Identity = 102/119 (85.71%), Postives = 110/119 (92.44%), Query Frame = 1 

		  

Query: 57  VEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLN 116
           +E+ KGRKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIR FA KAMGT DVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 117 KQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 176
           KQIWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIE+E+
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119
[Close]
BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
Match: RL313_ARATH (60S ribosomal protein L31-3 OS=Arabidopsis thaliana GN=RPL31C PE=2 SV=2)

HSP 1 Score: 201.8 bits (512), Expect = 6.000e-51
Identity = 100/119 (84.03%), Postives = 109/119 (91.60%), Query Frame = 1 

		  

Query: 57  VEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLN 116
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAP AIKEIR FA+KAMGT DVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 117 KQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 176
           KQIWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIE+ED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119
[Close]
BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
Match: RL31_PERFR (60S ribosomal protein L31 OS=Perilla frutescens GN=RPL31 PE=2 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 7.900e-51
Identity = 102/116 (87.93%), Postives = 109/116 (93.97%), Query Frame = 1 

		  

Query: 60  TKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLNKQI 119
           +K RKEEVV+REYTINLHKRLHGCTFKKKAP AIKEIR FA+KAMGT DVRVDVKLNK I
Sbjct: 6   SKPRKEEVVSREYTINLHKRLHGCTFKKKAPKAIKEIRKFAQKAMGTTDVRVDVKLNKHI 65

Query: 120 WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 176
           WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIP  GLKGLGT+VI++E+
Sbjct: 66  WSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPEGGLKGLGTQVIDEEE 121
[Close]
BLAST of Spo20935.1 vs. TAIR (Arabidopsis)
Match: AT2G19740.1 (Ribosomal protein L31e family protein)

HSP 1 Score: 203.8 bits (517), Expect = 9.000e-53
Identity = 102/119 (85.71%), Postives = 110/119 (92.44%), Query Frame = 1 

		  

Query: 57  VEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLN 116
           +E+ KGRKEEVVTREYTINLH+RLH CTFKKKAPNAIKEIR FA KAMGT DVRVDVKLN
Sbjct: 1   MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60

Query: 117 KQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 176
           KQIWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIE+E+
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE 119
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BLAST of Spo20935.1 vs. TAIR (Arabidopsis)
Match: AT5G56710.1 (Ribosomal protein L31e family protein)

HSP 1 Score: 201.8 bits (512), Expect = 3.400e-52
Identity = 100/119 (84.03%), Postives = 109/119 (91.60%), Query Frame = 1 

		  

Query: 57  VEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLN 116
           + + KGRKEEV+TREYTINLH+RLH CTFKKKAP AIKEIR FA+KAMGT DVRVDVKLN
Sbjct: 1   MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60

Query: 117 KQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 176
           KQIWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTKVIE+ED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED 119
[Close]
BLAST of Spo20935.1 vs. TAIR (Arabidopsis)
Match: AT4G26230.1 (Ribosomal protein L31e family protein)

HSP 1 Score: 200.7 bits (509), Expect = 7.600e-52
Identity = 99/119 (83.19%), Postives = 108/119 (90.76%), Query Frame = 1 

		  

Query: 57  VEQTKGRKEEVVTREYTINLHKRLHGCTFKKKAPNAIKEIRTFAKKAMGTNDVRVDVKLN 116
           + + KGRKEEVVTREYTINLH+RLH CTFKKKAP AIKEIR FA+K MGT DVRVDVKLN
Sbjct: 1   MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60

Query: 117 KQIWSRGIRSVPRRIRVRIARKRNDDEDAKEELYSLVTVAEIPAEGLKGLGTKVIEDED 176
           KQIWS+GIR  PRRIRVR+ARKRNDDEDAKEE +SLVTVAEIPAEGL GLGTK+IE+ED
Sbjct: 61  KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED 119
The following BLAST results are available for this feature:
BLAST of Spo20935.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902225832|gb|KNA20207.1|7.9e-59100.hypothetical protein SOVF_0544... [more]
gi|470102129|ref|XP_004287511.1|6.2e-5695.0PREDICTED: 60S ribosomal prote... [more]
gi|731327320|ref|XP_010674463.1|6.2e-5695.8PREDICTED: 60S ribosomal prote... [more]
gi|595808464|ref|XP_007202764.1|8.1e-5695.0hypothetical protein PRUPE_ppa... [more]
gi|694323018|ref|XP_009352600.1|8.1e-5695.0PREDICTED: 60S ribosomal prote... [more]
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BLAST of Spo20935.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RMZ6_SPIOL5.5e-59100.Uncharacterized protein OS=Spi... [more]
A0A0J8CQ15_BETVU4.3e-5695.8Uncharacterized protein OS=Bet... [more]
M5W3Y3_PRUPE5.7e-5695.0Uncharacterized protein OS=Pru... [more]
W9QLF2_9ROSA7.4e-5695.860S ribosomal protein L31 OS=M... [more]
M0ZHK6_SOLTU6.3e-5593.3Uncharacterized protein OS=Sol... [more]
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BLAST of Spo20935.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
RL31_NICGU1.4e-5590.860S ribosomal protein L31 OS=N... [more]
RL31_PANGI2.6e-5489.160S ribosomal protein L31 OS=P... [more]
RL311_ARATH1.6e-5185.760S ribosomal protein L31-1 OS... [more]
RL313_ARATH6.0e-5184.060S ribosomal protein L31-3 OS... [more]
RL31_PERFR7.9e-5187.960S ribosomal protein L31 OS=P... [more]
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BLAST of Spo20935.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT2G19740.19.0e-5385.7Ribosomal protein L31e family ... [more]
AT5G56710.13.4e-5284.0Ribosomal protein L31e family ... [more]
AT4G26230.17.6e-5283.1Ribosomal protein L31e family ... [more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000054Ribosomal protein L31ePRODOMPD006030coord: 58..119
score: 2.0
IPR000054Ribosomal protein L31ePANTHERPTHR1095660S RIBOSOMAL PROTEIN L31coord: 50..175
score: 6.4
IPR000054Ribosomal protein L31ePFAMPF01198Ribosomal_L31ecoord: 66..147
score: 6.8
IPR000054Ribosomal protein L31eSMARTSM01380Ribosomal_L31e_2coord: 65..148
score: 1.1
IPR020052Ribosomal protein L31e, conserved sitePROSITEPS01144RIBOSOMAL_L31Ecoord: 109..123
scor
IPR023621Ribosomal protein L31e domainGENE3D3.10.440.10coord: 65..152
score: 6.0
IPR023621Ribosomal protein L31e domainunknownSSF54575Ribosomal protein L31ecoord: 66..147
score: 1.02
NoneNo IPR availablePANTHERPTHR10956:SF12SUBFAMILY NOT NAMEDcoord: 50..175
score: 6.4

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process GO:0006414 translational elongation
biological_process GO:0001510 RNA methylation
biological_process GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c
cellular_component GO:0005840 ribosome
cellular_component GO:0005739 mitochondrion
cellular_component GO:0005622 intracellular
cellular_component GO:0009507 chloroplast
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0005730 nucleolus
cellular_component GO:0005750 mitochondrial respiratory chain complex III
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0019843 rRNA binding
RNA-Seq Expression