Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTACGGTGTCGCCGCTATCAAAGATCCTAACTCCCAGGTTTTTTTGTTTTTCTCTATCAAAGATACTTGGAGAACGACAAGTATGAAGAAGATTCGTTGATTTAATTGCTGAATTGTTGGTGATTTATTGTTCTTCGTTTTGCTTGTTAATTTGATGAAAATCTGGTGGGTTCTGTTAATTTACAAAATGCAATTTAAAACAAAAATCTACAACTAAGTCGAAATCCTTCTTCATGATATGGGGAAAACCCTATGTTAAACTGATTCGGGTCATTTTAGGGTTTAATTTGTTGTTATTTAGGTCAATTTGTTGAATTTTTGGTCAAATTGGTTTGGGTTCTTGAATTTCTTATCTTTTTGAAGGAGATAGTCTTCATCTAGTGTGTCAGTCATGTGGTGGTATGTGGGGAAGGGCTGGAGAGGGAAGATGAGAAGGAGATAGAGGCTGAGAGATACACGAAAGAGGAGGGAGGGTGCAGGGTAAGGGGTGTTGTATCGGTTGATATGGGAATACAGAAGGTGTTTCAGGAGGGAAGAAGATGGTGGATTTTTGACCTTCTGCGGCTCGATGGAAATTGAGATGTTGTTAGCATCAAACATCAGAAATCCCTCTGGAGCCGTGATCCTTTCTAACCCCATACAACTCCCATACAACTAGTGAGTCATTACAACTAGTAAGGAATCATCTGATTTGCTTCTGATTTGTGGCTCTATTGTACTGAGTTCTGAACTGATTTGCTGCTGATTTGTTGCTCTATTGTACTGAGTTCTGAACTGATTTGCTATTCTGCTAGCTTTTCCTAACCTGATTTCATGTAACTAAGCTGAGCTGATCTTATTTTTGCTAGTTTTAAGGAGTTTGTTATTGCTTGTTAGTTGGGATTGCTGAATTATCTGTGTAAAAGATTGGGATTGCTGAATTGTCTTCGTAAGGTTTGGGATTACTGAATTTATGGTTTCTGCCTTCCTCTGGTCAGCATATTTTTATTATTTGGATTAGTTTTTCATCTTACGATGTACATATTGAGCTTTTGATGGTATGGATGAGATTACTGCATCCTTTTCAATTGCTTTCAACCCTACTGGAACCAAGTATATACCATCATATGCTTGGAGAATTCTTTGTTGTCCTTTTCTGATTTTTACTTTCATGTATTTGTATCTTGTCAAATAACAAGTGTTGAACACCATCTAATTCGAGGACTATACCTGAATTGTGTGCAATGTTTACATGATTTGGCAGGATTGATTGAGCGGTTTGTCTTATTCTCATCTTTTCTCATGTTACTCAATTCCTTCGCAGTATATTTGCTGGGTACAACAAAACACTGAGGGTGTTTGATGTACATCGCCCTGGCGGAGATTTTAAACAACATTCAACTCTTCAAGGATCCAAAGAAAGGGAAGTCTGGTATAGCATTCTGCCTTTTCACATAATTGCACAACTTTTGCGAAGGTTTTTTTTTATTGTTTTAGAAGTTTGTTCAAGCTAAATTTTAGTTCAGGGCTTAAAAGAAGAGTCTTGGTGGTTGATAAGAAAAATATTCTGAATGTTTAAACTTCAAATACAGTCACAATGTATTGCACTAATAGCAACCAGAATGGAATCATGAATGTTTTGTATAAATGTACCCGTAGTAGGAGGTGATGGTTGTGTTTTTGTATAACTATCTTATTATTTTCCTTTTTGTGTTGGCACTTTGCATTTTACATTGTTCTATAATCTTAAGGTAAATCTTATAAGTGTTTATATTAAAATTCTTTTTTCTGCTGGACCAGACTCATATTCACTACATGATTAGTTGAGATAATTTTGTTCTGCCAAGCTTATTCAACTCAATAACCTACTTAATTAAACTCCTCCTTGCTTCTCATTTTGGCTTCAATAAAGAATCTTGTCTAATTCATTGTCTTCCTAGGGCCTCTCTCTATGGGTGCTTTAACCCGTTTCTATATCAATGCAAAGAACAGATCTAGTTTAATTTGAACAATGATAGATTATATTTCTACTATGTTGTAAATCTTATTTGTTGATGTACTGATGTGAAATTTGAGCATAACATGAAACAAATTGTTTCACAAGGTTTCAGTAGAATAAACCAATAAGAGTAGTATAGCTATTGACCAGGAAGAATCAGGTTTAGACTCTACAGAGTGCCAAGTGGTTCTGGTTGCTTATGGTCAACGCAGGTCAATGAATAAATGAGGGCTAGAAATGCAAGCCTCAACTTTGGTATGTGTTGAATCTTGAATGTTTGGCTATCATAAATTCGTAGCCTTTTAGCAAGCATTAGGAAAGAGTACTGGGAGGGTTATGGGTCCTGCAGCTTACCGCTATGATCTAATTAAGACATTGTATTTGTTCTTCAGGTTTCATGAGTTGAAGGCTACACAGTTCCTCCTGATTTCATCCTGCTTACTCTACCAAGCTTTCCCATGGCAGTGCTGGAAGCTGAGTTAAAGTTGCCTACAGATTCATATACCGCCAACCTTATAATAAACGAGGGAGAGTCTGTGTATGATTATTGTTGGTACCCTTACATGTCTGCTTCAGGTATGTACTACATGCCTTTAACCTTCTTTTGTGTTCACATATATGTAACTGTTTAATTTTTTATTTTTTCTTTTACATGAAGTATACGAATGCAAATCAAAACTAGTTTCCTCCCTCGTTGATCATAATCATATTGATGTAGTGATTATGAACCAATATAATGTAACTATTTCTTCCAGAAATTAATTTGTGAAAAACATGGAGATTAGTGTATTTTGGTTAAAGTTAGGAGAAAATTAGGTAGTTTATTGCATTCTTAGACTAACTTTCCATATTATATGACTTTTACTGAGAGGAAATTGTGGGGTTGCTCATATTTTAATTAGGCCCTTTTTATTCTTCACATGTTTGCAATGAATTAGAGTTATTTTTTGTGTTTAAAACAGACTTTTGCTGATTGTAATTGAATTAAAGTTCATTTTTCATGATTCTCTAGTGTTTTTTGTATGTGCAGTACAATTGATTAAAGCTGAATTTTAAGAATCAAAATACGTAGCAGTATTTACGGATTAAAACTGATATTCACTAGCATAGTCGTGTATTATTGGATGCAATTTTACTCTCTATACACAAACATATTTACCATTGTCACACTGGTATAGTCGTGTCATTACTAGAACTCGTTGTATGTTAGCAATGCCTAAAACCAGCATCGTTATACCCAATTTCTTTTATAGGATGTTCATTATGACATTATACCACCAAGCTTTGAGCAATAGTTTTCATTCTATCTACTAAAGTAATTTACTATCTGCTAGTCTTACATATCACAGTCTGAAAAGCCCGAACAAAGGAAACAATAGTGAGACCTGTTTCTTTGTCCATTTTTTGTGATCATACTGCATTATGTTAACTCATTTGATGATCATCTAAGCATATCATATATTCTTCCAGTTCTTTCGGCAGTGTCTGGAGTTCGTCTAAAATTCACGGGACTTCATGAAAGTAAGTTCTACTTCGTCCACAAATCAAAGGGGAAAAAAGGAAGAAAGAGAGGCATTACTAAAGTGTTTTAGAAACATGCAACTCAGCTGCAATGAAATTTACAATGCTTTTTGTCTGACAAATAATATCTTATTTTGCAGATTATGTCGTTGTGGTTTCCTGCATCATTTTGGTAGTCCTGTTTTCTCTCCAACATCATGGAACACATAGGGTTTCTTTCATGTTTGGACCAATTGTTTTAGCATGGCTCCTTTGAATCAGCAGCATCAGTGCTTATAATATTATAAGGTGGTCATTTGTGTTTATTGATTAAGTCAAGTACTGAATATTGTTCATCTGATTGTTTTAATTAGGATAGAAATGTTGATGTAATATGTAGATTGATTGAATATCAATTGTTGGTTTGGCTTAGAATGTGATGGTGGTTTGGTGTTTATTGCTATAATCAAGTGGTAGATGGTGGGTGTATTGCATTTGGTTGTTTCACTAGGGATTAATCTGGCAATGGATTCTTCTAATTTTTTTTTTTGTAAAATAAATGTACTATTTGCAGC ATGTTTACGGTGTCGCCGCTATCAAAGATCCTAACTCCCAGTATATTTGCTGGGTACAACAAAACACTGAGGGTGTTTGATGTACATCGCCCTGGCGGAGATTTTAAACAACATTCAACTCTTCAAGGATCCAAAGAAAGGGAAGTCTGGTTTCATGAGTTGAAGGCTACACAGTTCCTCCTGATTTCATCCTGCTTACTCTACCAAGCTTTCCCATGGCAGTGCTGGAAGCTGAGTTAAAGTTGCCTACAGATTCATATACCGCCAACCTTATAATAAACGAGGGAGAGTCTGTGTATGATTATTGTTGGTACCCTTACATGTCTGCTTCAGTTCTTTCGGCAGTGTCTGGAGTTCGTCTAAAATTCACGGGACTTCATGAAAATTATGTCGTTGTGGTTTCCTGCATCATTTTGGTAGTCCTGTTTTCTCTCCAACATCATGGAACACATAGGGTTTCTTTCATGTTTGGACCAATTGTTTTAGCATGGCTCCTTTGAATCAGCAGCATCAGTGCTTATAATATTATAAGGTGGTCATTTGTGTTTATTGATTAAGTCAAGTACTGAATATTGTTCATCTGATTGTTTTAATTAGGATAGAAATGTTGATGTAATATGTAGATTGATTGAATATCAATTGTTGGTTTGGCTTAGAATGTGATGGTGGTTTGGTGTTTATTGCTATAATCAAGTGGTAGATGGTGGGTGTATTGCATTTGGTTGTTTCACTAGGGATTAATCTGGCAATGGATTCTTCTAATTTTTTTTTTTGTAAAATAAATGTACTATTTGCAGC ATGTTTACGGTGTCGCCGCTATCAAAGATCCTAACTCCCAGTATATTTGCTGGGTACAACAAAACACTGAGGGTGTTTGATGTACATCGCCCTGGCGGAGATTTTAAACAACATTCAACTCTTCAAGGATCCAAAGAAAGGGAAGTCTGGTTTCATGAGTTGAAGGCTACACAGTTCCTCCTGATTTCATCCTGCTTACTCTACCAAGCTTTCCCATGGCAGTGCTGGAAGCTGAGTTAA MFTVSPLSKILTPSIFAGYNKTLRVFDVHRPGGDFKQHSTLQGSKEREVWFHELKATQFLLISSCLLYQAFPWQCWKLS Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo26288.1 vs. NCBI nr
Match: gi|902132452|gb|KNA04318.1| (hypothetical protein SOVF_200770 [Spinacia oleracea]) HSP 1 Score: 164.1 bits (414), Expect = 1.000e-37 Identity = 77/79 (97.47%), Postives = 77/79 (97.47%), Query Frame = 1
BLAST of Spo26288.1 vs. NCBI nr
Match: gi|902193336|gb|KNA12280.1| (hypothetical protein SOVF_127390 [Spinacia oleracea]) HSP 1 Score: 68.9 bits (167), Expect = 4.400e-9 Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 1
BLAST of Spo26288.1 vs. NCBI nr
Match: gi|697126386|ref|XP_009617227.1| (PREDICTED: telomerase Cajal body protein 1 [Nicotiana tomentosiformis]) HSP 1 Score: 62.8 bits (151), Expect = 3.200e-7 Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = 1
BLAST of Spo26288.1 vs. NCBI nr
Match: gi|970006071|ref|XP_015063883.1| (PREDICTED: telomerase Cajal body protein 1 [Solanum pennellii]) HSP 1 Score: 62.4 bits (150), Expect = 4.100e-7 Identity = 25/32 (78.12%), Postives = 30/32 (93.75%), Query Frame = 1
BLAST of Spo26288.1 vs. NCBI nr
Match: gi|460373999|ref|XP_004232799.1| (PREDICTED: telomerase Cajal body protein 1 [Solanum lycopersicum]) HSP 1 Score: 62.4 bits (150), Expect = 4.100e-7 Identity = 25/32 (78.12%), Postives = 30/32 (93.75%), Query Frame = 1
BLAST of Spo26288.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCA6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_200770 PE=4 SV=1) HSP 1 Score: 164.1 bits (414), Expect = 7.000e-38 Identity = 77/79 (97.47%), Postives = 77/79 (97.47%), Query Frame = 1
BLAST of Spo26288.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QYF1_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_127390 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 3.100e-9 Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 1
BLAST of Spo26288.1 vs. UniProtKB/TrEMBL
Match: K4B9D5_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.900e-7 Identity = 25/32 (78.12%), Postives = 30/32 (93.75%), Query Frame = 1
BLAST of Spo26288.1 vs. UniProtKB/TrEMBL
Match: A0A0V0I5Q7_SOLCH (Putative telomerase Cajal body protein 1-like OS=Solanum chacoense PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.900e-7 Identity = 25/32 (78.12%), Postives = 30/32 (93.75%), Query Frame = 1
BLAST of Spo26288.1 vs. UniProtKB/TrEMBL
Match: M1C1I6_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400022408 PE=4 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.900e-7 Identity = 25/32 (78.12%), Postives = 30/32 (93.75%), Query Frame = 1
BLAST of Spo26288.1 vs. TAIR (Arabidopsis)
Match: AT4G21520.1 (Transducin/WD40 repeat-like superfamily protein) HSP 1 Score: 55.8 bits (133), Expect = 1.400e-8 Identity = 23/32 (71.88%), Postives = 29/32 (90.62%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo26288.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo26288.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo26288.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo26288.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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