Spo11797 (gene) | SpinachBase

Overview


Name	Spo11797
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	SAUR-like auxin-responsive protein family, putative
Location	chr4 : 111723306 .. 111723713 (+)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATCAGCACAAAGAAGCTCCTCAAGATGGCAAGAAAGTGGCAAAAGATAGCTGCCGCTAGCAGGAAGAGGATCTCTTGGCCTCGACCAGTGGCTGATAAAGGTCACTTTGTCGTCTATACAACTGATGGAAGACGGTTTATCATCCCTTTGGCTTATCTCAAGAGCGAGATTTTTATAGAGCTCTTCAGAATAGCAGAGGAAGAGTTCGGGTTAACAAGTTCAGGGCCAATCACACTTCCCTGTGATTCGAGTTTCATGGAATATGCAATCTCTATGATCCAAAGACGTGTAGCTGAGGACTTGGAAAAAGCATTGATCATGTCATTGGCCAGCTGCAGATATTTCTCTGTGTCACATGAACATCAAGATCAAACAAATTCACACTTGTTGATTTCTAGTTTCTAG

mRNA sequence

ATGATCAGCACAAAGAAGCTCCTCAAGATGGCAAGAAAGTGGCAAAAGATAGCTGCCGCTAGCAGGAAGAGGATCTCTTGGCCTCGACCAGTGGCTGATAAAGGTCACTTTGTCGTCTATACAACTGATGGAAGACGGTTTATCATCCCTTTGGCTTATCTCAAGAGCGAGATTTTTATAGAGCTCTTCAGAATAGCAGAGGAAGAGTTCGGGTTAACAAGTTCAGGGCCAATCACACTTCCCTGTGATTCGAGTTTCATGGAATATGCAATCTCTATGATCCAAAGACGTGTAGCTGAGGACTTGGAAAAAGCATTGATCATGTCATTGGCCAGCTGCAGATATTTCTCTGTGTCACATGAACATCAAGATCAAACAAATTCACACTTGTTGATTTCTAGTTTCTAG

Coding sequence (CDS)

ATGATCAGCACAAAGAAGCTCCTCAAGATGGCAAGAAAGTGGCAAAAGATAGCTGCCGCTAGCAGGAAGAGGATCTCTTGGCCTCGACCAGTGGCTGATAAAGGTCACTTTGTCGTCTATACAACTGATGGAAGACGGTTTATCATCCCTTTGGCTTATCTCAAGAGCGAGATTTTTATAGAGCTCTTCAGAATAGCAGAGGAAGAGTTCGGGTTAACAAGTTCAGGGCCAATCACACTTCCCTGTGATTCGAGTTTCATGGAATATGCAATCTCTATGATCCAAAGACGTGTAGCTGAGGACTTGGAAAAAGCATTGATCATGTCATTGGCCAGCTGCAGATATTTCTCTGTGTCACATGAACATCAAGATCAAACAAATTCACACTTGTTGATTTCTAGTTTCTAG

Protein sequence

MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFIELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYFSVSHEHQDQTNSHLLISSF

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo11797.1	Spo11797.1	mRNA

Homology

[Close]

BLAST of Spo11797.1 vs. NCBI nr
Match: gi|902203452|gb|KNA14562.1| (hypothetical protein SOVF_106460 [Spinacia oleracea])

HSP 1 Score: 263.8 bits (673), Expect = 1.600e-67
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60
           MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60

Query: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYFSVSH 120
           ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRY SVSH
Sbjct: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYSSVSH 120

Query: 121 EHQDQTNSHLLISSF 136
           EHQDQTNSHLLISSF
Sbjct: 121 EHQDQTNSHLLISSF 135

[Close]

BLAST of Spo11797.1 vs. NCBI nr
Match: gi|902210322|gb|KNA16394.1| (hypothetical protein SOVF_089570 [Spinacia oleracea])

HSP 1 Score: 248.1 bits (632), Expect = 9.100e-63
Identity = 125/135 (92.59%), Postives = 131/135 (97.04%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60
           MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLK+EIFI
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKNEIFI 60

Query: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYFSVSH 120
           ELFRIAEEEFGLTS+GPITLPCDSSFMEY IS+IQRRVAEDL KALIMSLASCRY SV+H
Sbjct: 61  ELFRIAEEEFGLTSTGPITLPCDSSFMEYTISIIQRRVAEDLGKALIMSLASCRYSSVTH 120

Query: 121 EHQDQTNSHLLISSF 136
           E+QDQTNS +LISSF
Sbjct: 121 EYQDQTNSQVLISSF 135

[Close]

BLAST of Spo11797.1 vs. NCBI nr
Match: gi|902203447|gb|KNA14557.1| (hypothetical protein SOVF_106410 [Spinacia oleracea])

HSP 1 Score: 228.0 bits (580), Expect = 9.700e-57
Identity = 112/135 (82.96%), Postives = 122/135 (90.37%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60
           MISTKKL+KMARKWQKIAAASRKRISWPRP A +GHFVVYT DGRRF+IPL YLKS IFI
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWPRPAAKEGHFVVYTADGRRFMIPLTYLKSAIFI 60

Query: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYFSVSH 120
           ELFRIAEEEFG+TSSGPITLPCDS+FMEYA++MIQR VAEDLEKAL+MSLASCRY S+SH
Sbjct: 61  ELFRIAEEEFGVTSSGPITLPCDSNFMEYAVNMIQRCVAEDLEKALVMSLASCRYSSLSH 120

Query: 121 EHQDQTNSHLLISSF 136
           EHQ  TN  L + SF
Sbjct: 121 EHQKHTNPQLFLCSF 135

[Close]

BLAST of Spo11797.1 vs. NCBI nr
Match: gi|902203450|gb|KNA14560.1| (hypothetical protein SOVF_106440 [Spinacia oleracea])

HSP 1 Score: 225.7 bits (574), Expect = 4.800e-56
Identity = 109/135 (80.74%), Postives = 123/135 (91.11%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60
           MIST+KL+KMARKWQKIAAASRKRISWPRPVA++GHFVVYT DG+RF+IPL YLKS IFI
Sbjct: 1   MISTRKLIKMARKWQKIAAASRKRISWPRPVANEGHFVVYTADGKRFMIPLTYLKSAIFI 60

Query: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYFSVSH 120
           ELFRIAEEEFG+TSSGPITLPCDS+FMEY +SMIQRRVAEDLE ALIMSLA+CRY S+ H
Sbjct: 61  ELFRIAEEEFGVTSSGPITLPCDSNFMEYIVSMIQRRVAEDLEMALIMSLATCRYSSLLH 120

Query: 121 EHQDQTNSHLLISSF 136
           EHQ+ TN  + + SF
Sbjct: 121 EHQEHTNPQMFVCSF 135

[Close]

BLAST of Spo11797.1 vs. NCBI nr
Match: gi|870849024|gb|KMT01287.1| (hypothetical protein BVRB_9g213040 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 224.2 bits (570), Expect = 1.400e-55
Identity = 109/135 (80.74%), Postives = 123/135 (91.11%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60
           MISTKKL+KMARKWQKIAAASR++ISWPRP+ADKG+FVVYTTDGRRFIIPLAYLK+EIF+
Sbjct: 1   MISTKKLIKMARKWQKIAAASRRKISWPRPLADKGNFVVYTTDGRRFIIPLAYLKNEIFV 60

Query: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYFSVSH 120
           EL ++AEEEFG+ S G I +PCDSSFMEYAISMIQR VAEDL+KALIMSLA CRY S+SH
Sbjct: 61  ELLKLAEEEFGVASLGAIMMPCDSSFMEYAISMIQRCVAEDLQKALIMSLADCRYSSLSH 120

Query: 121 EHQDQTNSHLLISSF 136
           EHQ+ TN HL I SF
Sbjct: 121 EHQEHTNQHLFICSF 135

[Close]

BLAST of Spo11797.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R709_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106460 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.100e-67
Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60
           MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60

Query: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYFSVSH 120
           ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRY SVSH
Sbjct: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYSSVSH 120

Query: 121 EHQDQTNSHLLISSF 136
           EHQDQTNSHLLISSF
Sbjct: 121 EHQDQTNSHLLISSF 135

[Close]

BLAST of Spo11797.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RBK5_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_089570 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 6.300e-63
Identity = 125/135 (92.59%), Postives = 131/135 (97.04%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60
           MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLK+EIFI
Sbjct: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKNEIFI 60

Query: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYFSVSH 120
           ELFRIAEEEFGLTS+GPITLPCDSSFMEY IS+IQRRVAEDL KALIMSLASCRY SV+H
Sbjct: 61  ELFRIAEEEFGLTSTGPITLPCDSSFMEYTISIIQRRVAEDLGKALIMSLASCRYSSVTH 120

Query: 121 EHQDQTNSHLLISSF 136
           E+QDQTNS +LISSF
Sbjct: 121 EYQDQTNSQVLISSF 135

[Close]

BLAST of Spo11797.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R706_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106410 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 6.800e-57
Identity = 112/135 (82.96%), Postives = 122/135 (90.37%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60
           MISTKKL+KMARKWQKIAAASRKRISWPRP A +GHFVVYT DGRRF+IPL YLKS IFI
Sbjct: 1   MISTKKLIKMARKWQKIAAASRKRISWPRPAAKEGHFVVYTADGRRFMIPLTYLKSAIFI 60

Query: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYFSVSH 120
           ELFRIAEEEFG+TSSGPITLPCDS+FMEYA++MIQR VAEDLEKAL+MSLASCRY S+SH
Sbjct: 61  ELFRIAEEEFGVTSSGPITLPCDSNFMEYAVNMIQRCVAEDLEKALVMSLASCRYSSLSH 120

Query: 121 EHQDQTNSHLLISSF 136
           EHQ  TN  L + SF
Sbjct: 121 EHQKHTNPQLFLCSF 135

[Close]

BLAST of Spo11797.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R4Y0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_106440 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.400e-56
Identity = 109/135 (80.74%), Postives = 123/135 (91.11%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60
           MIST+KL+KMARKWQKIAAASRKRISWPRPVA++GHFVVYT DG+RF+IPL YLKS IFI
Sbjct: 1   MISTRKLIKMARKWQKIAAASRKRISWPRPVANEGHFVVYTADGKRFMIPLTYLKSAIFI 60

Query: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYFSVSH 120
           ELFRIAEEEFG+TSSGPITLPCDS+FMEY +SMIQRRVAEDLE ALIMSLA+CRY S+ H
Sbjct: 61  ELFRIAEEEFGVTSSGPITLPCDSNFMEYIVSMIQRRVAEDLEMALIMSLATCRYSSLLH 120

Query: 121 EHQDQTNSHLLISSF 136
           EHQ+ TN  + + SF
Sbjct: 121 EHQEHTNPQMFVCSF 135

[Close]

BLAST of Spo11797.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BJU6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g213040 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 9.800e-56
Identity = 109/135 (80.74%), Postives = 123/135 (91.11%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVADKGHFVVYTTDGRRFIIPLAYLKSEIFI 60
           MISTKKL+KMARKWQKIAAASR++ISWPRP+ADKG+FVVYTTDGRRFIIPLAYLK+EIF+
Sbjct: 1   MISTKKLIKMARKWQKIAAASRRKISWPRPLADKGNFVVYTTDGRRFIIPLAYLKNEIFV 60

Query: 61  ELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRYFSVSH 120
           EL ++AEEEFG+ S G I +PCDSSFMEYAISMIQR VAEDL+KALIMSLA CRY S+SH
Sbjct: 61  ELLKLAEEEFGVASLGAIMMPCDSSFMEYAISMIQRCVAEDLQKALIMSLADCRYSSLSH 120

Query: 121 EHQDQTNSHLLISSF 136
           EHQ+ TN HL I SF
Sbjct: 121 EHQEHTNQHLFICSF 135

[Close]

BLAST of Spo11797.1 vs. ExPASy Swiss-Prot
Match: SAU66_ARATH (Auxin-responsive protein SAUR66 OS=Arabidopsis thaliana GN=SAUR66 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.100e-31
Identity = 71/137 (51.82%), Postives = 95/137 (69.34%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP-----VADKGHFVVYTTDGRRFIIPLAYLK 60
           M++TKKL+KM RKWQ+ AA  RKRIS+ RP       +KG FVVYT D  RF  P++YL 
Sbjct: 1   MMNTKKLIKMFRKWQQRAALHRKRISFQRPSTRSTTVEKGCFVVYTADNTRFAFPISYLS 60

Query: 61  SEIFIELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRY 120
           + +F E+  I+EEEFGL + GPITLP DS F+EY I +I+RR+  D EKAL+MS++S R 
Sbjct: 61  NSVFQEILEISEEEFGLPTGGPITLPFDSVFLEYLIKLIKRRMDGDTEKALLMSISSAR- 120

Query: 121 FSVSHEHQDQTNSHLLI 133
              S + Q+Q+   LL+
Sbjct: 121 --CSLQKQEQSTQQLLV 134

[Close]

BLAST of Spo11797.1 vs. ExPASy Swiss-Prot
Match: SAU64_ARATH (Auxin-responsive protein SAUR64 OS=Arabidopsis thaliana GN=SAUR64 PE=2 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 9.100e-31
Identity = 73/140 (52.14%), Postives = 98/140 (70.00%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP-------VADKGHFVVYTTDGRRFIIPLAY 60
           M++TKKL+KMA+KWQ+ AA  RKRIS+ R         A+KG FVVYTTD  RF  PL+Y
Sbjct: 1   MMNTKKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSY 60

Query: 61  LKSEIFIELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASC 120
           L + +F EL +I+EEEFGL + GPIT P DS F+EY I ++QRR+  D EKAL+MS++S 
Sbjct: 61  LSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSISSA 120

Query: 121 RYFS-VSHEHQDQTNSHLLI 133
           R  S  S + Q+++   LL+
Sbjct: 121 RCSSQCSLKLQERSTQQLLV 140

[Close]

BLAST of Spo11797.1 vs. ExPASy Swiss-Prot
Match: SAU63_ARATH (Auxin-responsive protein SAUR63 OS=Arabidopsis thaliana GN=SAUR63 PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 7.700e-30
Identity = 69/140 (49.29%), Postives = 93/140 (66.43%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP--------VADKGHFVVYTTDGRRFIIPLA 60
           MI+ KKL+KMA+KWQ+ AA  RKRIS+ R           +KG FVVYT D  RF  P++
Sbjct: 1   MINAKKLMKMAKKWQQRAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPIS 60

Query: 61  YLKSEIFIELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLAS 120
           YL + +  EL +I+EE+FGL + GPITLP DS+F+EY + +IQRR+ ED EKAL++S++S
Sbjct: 61  YLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSISS 120

Query: 121 CRYFSVSHEHQDQTNSHLLI 133
            R      E Q  T   LL+
Sbjct: 121 ARCSFQPQEQQCSTTQQLLV 140

[Close]

BLAST of Spo11797.1 vs. ExPASy Swiss-Prot
Match: SAU65_ARATH (Auxin-responsive protein SAUR65 OS=Arabidopsis thaliana GN=SAUR65 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 1.700e-29
Identity = 73/147 (49.66%), Postives = 91/147 (61.90%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVA---------------DKGHFVVYTTDGR 60
           MI+TKKLLKMA+KWQ+ AA  RKRIS+ R                  +KG FVVYT D  
Sbjct: 1   MINTKKLLKMAKKWQQRAALKRKRISFQRSTTTTTTTTTTTSSSTAVEKGCFVVYTVDKI 60

Query: 61  RFIIPLAYLKSEIFIELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKA 120
           RF  PL+YL + +F EL +I+EEEFGL + GPITLP DS F+EY I  I+RR+  D EKA
Sbjct: 61  RFAFPLSYLNNSVFEELLKISEEEFGLRAGGPITLPFDSVFLEYLIKFIERRMDGDTEKA 120

Query: 121 LIMSLASCRYFSVSHEHQDQTNSHLLI 133
           L+MS++S R      E Q      LL+
Sbjct: 121 LLMSISSARCSMQPQEQQSGYTQQLLV 147

[Close]

BLAST of Spo11797.1 vs. ExPASy Swiss-Prot
Match: SAU62_ARATH (Auxin-responsive protein SAUR62 OS=Arabidopsis thaliana GN=SAUR62 PE=2 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 3.800e-29
Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP--------VADKGHFVVYTTDGRRFIIPLA 60
           MI+ KKL+K+A+KWQ+ AA  RKRIS+ R           +KG FVVYT D  RF  PL+
Sbjct: 2   MINAKKLMKLAKKWQQRAALKRKRISFQRSSITTSSQTAVEKGCFVVYTADKIRFSFPLS 61

Query: 61  YLKSEIFIELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLAS 120
           YL + I  EL +I+EEEFGL + GPITLP DS+F+EY I++IQRR+ ED EKAL++S++S
Sbjct: 62  YLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKALLLSISS 121

Query: 121 CRYFSVSHEHQDQTNSHLL 132
            R      +H   T   L+
Sbjct: 122 ARSSFQPQQHCSATQQLLV 140

[Close]

BLAST of Spo11797.1 vs. TAIR (Arabidopsis)
Match: AT1G29500.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 134.4 bits (337), Expect = 5.100e-32
Identity = 71/137 (51.82%), Postives = 95/137 (69.34%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP-----VADKGHFVVYTTDGRRFIIPLAYLK 60
           M++TKKL+KM RKWQ+ AA  RKRIS+ RP       +KG FVVYT D  RF  P++YL 
Sbjct: 1   MMNTKKLIKMFRKWQQRAALHRKRISFQRPSTRSTTVEKGCFVVYTADNTRFAFPISYLS 60

Query: 61  SEIFIELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASCRY 120
           + +F E+  I+EEEFGL + GPITLP DS F+EY I +I+RR+  D EKAL+MS++S R 
Sbjct: 61  NSVFQEILEISEEEFGLPTGGPITLPFDSVFLEYLIKLIKRRMDGDTEKALLMSISSAR- 120

Query: 121 FSVSHEHQDQTNSHLLI 133
              S + Q+Q+   LL+
Sbjct: 121 --CSLQKQEQSTQQLLV 134

[Close]

BLAST of Spo11797.1 vs. TAIR (Arabidopsis)
Match: AT1G29450.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 134.4 bits (337), Expect = 5.100e-32
Identity = 73/140 (52.14%), Postives = 98/140 (70.00%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP-------VADKGHFVVYTTDGRRFIIPLAY 60
           M++TKKL+KMA+KWQ+ AA  RKRIS+ R         A+KG FVVYTTD  RF  PL+Y
Sbjct: 1   MMNTKKLIKMAKKWQQRAALHRKRISFQRSSSATSSTAAEKGCFVVYTTDSTRFAFPLSY 60

Query: 61  LKSEIFIELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLASC 120
           L + +F EL +I+EEEFGL + GPIT P DS F+EY I ++QRR+  D EKAL+MS++S 
Sbjct: 61  LSNSVFQELLKISEEEFGLPTGGPITSPFDSVFLEYLIKLVQRRMDADTEKALLMSISSA 120

Query: 121 RYFS-VSHEHQDQTNSHLLI 133
           R  S  S + Q+++   LL+
Sbjct: 121 RCSSQCSLKLQERSTQQLLV 140

[Close]

BLAST of Spo11797.1 vs. TAIR (Arabidopsis)
Match: AT1G29440.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 131.3 bits (329), Expect = 4.400e-31
Identity = 69/140 (49.29%), Postives = 93/140 (66.43%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP--------VADKGHFVVYTTDGRRFIIPLA 60
           MI+ KKL+KMA+KWQ+ AA  RKRIS+ R           +KG FVVYT D  RF  P++
Sbjct: 1   MINAKKLMKMAKKWQQRAALHRKRISFQRSSVFTSSSSTVEKGCFVVYTADKIRFAFPIS 60

Query: 61  YLKSEIFIELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLAS 120
           YL + +  EL +I+EE+FGL + GPITLP DS+F+EY + +IQRR+ ED EKAL++S++S
Sbjct: 61  YLSNSVVQELLKISEEDFGLPTEGPITLPFDSAFLEYLVKLIQRRMDEDTEKALLLSISS 120

Query: 121 CRYFSVSHEHQDQTNSHLLI 133
            R      E Q  T   LL+
Sbjct: 121 ARCSFQPQEQQCSTTQQLLV 140

[Close]

BLAST of Spo11797.1 vs. TAIR (Arabidopsis)
Match: AT1G29460.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 130.2 bits (326), Expect = 9.700e-31
Identity = 73/147 (49.66%), Postives = 91/147 (61.90%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRPVA---------------DKGHFVVYTTDGR 60
           MI+TKKLLKMA+KWQ+ AA  RKRIS+ R                  +KG FVVYT D  
Sbjct: 1   MINTKKLLKMAKKWQQRAALKRKRISFQRSTTTTTTTTTTTSSSTAVEKGCFVVYTVDKI 60

Query: 61  RFIIPLAYLKSEIFIELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKA 120
           RF  PL+YL + +F EL +I+EEEFGL + GPITLP DS F+EY I  I+RR+  D EKA
Sbjct: 61  RFAFPLSYLNNSVFEELLKISEEEFGLRAGGPITLPFDSVFLEYLIKFIERRMDGDTEKA 120

Query: 121 LIMSLASCRYFSVSHEHQDQTNSHLLI 133
           L+MS++S R      E Q      LL+
Sbjct: 121 LLMSISSARCSMQPQEQQSGYTQQLLV 147

[Close]

BLAST of Spo11797.1 vs. TAIR (Arabidopsis)
Match: AT1G29430.1 (SAUR-like auxin-responsive protein family )

HSP 1 Score: 129.0 bits (323), Expect = 2.200e-30
Identity = 70/139 (50.36%), Postives = 93/139 (66.91%), Query Frame = 1

		  
Query: 1   MISTKKLLKMARKWQKIAAASRKRISWPRP--------VADKGHFVVYTTDGRRFIIPLA 60
           MI+ KKL+K+A+KWQ+ AA  RKRIS+ R           +KG FVVYT D  RF  PL+
Sbjct: 2   MINAKKLMKLAKKWQQRAALKRKRISFQRSSITTSSQTAVEKGCFVVYTADKIRFSFPLS 61

Query: 61  YLKSEIFIELFRIAEEEFGLTSSGPITLPCDSSFMEYAISMIQRRVAEDLEKALIMSLAS 120
           YL + I  EL +I+EEEFGL + GPITLP DS+F+EY I++IQRR+ ED EKAL++S++S
Sbjct: 62  YLSNTIVQELLKISEEEFGLPTEGPITLPFDSAFLEYLINLIQRRMDEDTEKALLLSISS 121

Query: 121 CRYFSVSHEHQDQTNSHLL 132
            R      +H   T   L+
Sbjct: 122 ARSSFQPQQHCSATQQLLV 140

The following BLAST results are available for this feature:

BLAST of Spo11797.1 vs. NCBI nr
BLAST of Spo11797.1 vs. UniProtKB/TrEMBL
BLAST of Spo11797.1 vs. ExPASy Swiss-Prot
BLAST of Spo11797.1 vs. TAIR (Arabidopsis)

BLAST of Spo11797.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902203452\|gb\|KNA14562.1\|	1.6e-67	99.2	hypothetical protein SOVF_1064...	[more]
gi\|902210322\|gb\|KNA16394.1\|	9.1e-63	92.5	hypothetical protein SOVF_0895...	[more]
gi\|902203447\|gb\|KNA14557.1\|	9.7e-57	82.9	hypothetical protein SOVF_1064...	[more]
gi\|902203450\|gb\|KNA14560.1\|	4.8e-56	80.7	hypothetical protein SOVF_1064...	[more]
gi\|870849024\|gb\|KMT01287.1\|	1.4e-55	80.7	hypothetical protein BVRB_9g21...	[more]

BLAST of Spo11797.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9R709_SPIOL	1.1e-67	99.2	Uncharacterized protein OS=Spi...	[more]
A0A0K9RBK5_SPIOL	6.3e-63	92.5	Uncharacterized protein OS=Spi...	[more]
A0A0K9R706_SPIOL	6.8e-57	82.9	Uncharacterized protein OS=Spi...	[more]
A0A0K9R4Y0_SPIOL	3.4e-56	80.7	Uncharacterized protein OS=Spi...	[more]
A0A0J8BJU6_BETVU	9.8e-56	80.7	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo11797.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
SAU66_ARATH	9.1e-31	51.8	Auxin-responsive protein SAUR6...	[more]
SAU64_ARATH	9.1e-31	52.1	Auxin-responsive protein SAUR6...	[more]
SAU63_ARATH	7.7e-30	49.2	Auxin-responsive protein SAUR6...	[more]
SAU65_ARATH	1.7e-29	49.6	Auxin-responsive protein SAUR6...	[more]
SAU62_ARATH	3.8e-29	50.3	Auxin-responsive protein SAUR6...	[more]

BLAST of Spo11797.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT1G29500.1	5.1e-32	51.8	SAUR-like auxin-responsive pro...	[more]
AT1G29450.1	5.1e-32	52.1	SAUR-like auxin-responsive pro...	[more]
AT1G29440.1	4.4e-31	49.2	SAUR-like auxin-responsive pro...	[more]
AT1G29460.1	9.7e-31	49.6	SAUR-like auxin-responsive pro...	[more]
AT1G29430.1	2.2e-30	50.3	SAUR-like auxin-responsive pro...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003676	Small auxin-up RNA	PFAM	PF02519	Auxin_inducible	coord: 5..94 score: 2.8
None	No IPR available	PANTHER	PTHR31175	AUXIN-RESPONSIVE FAMILY PROTEIN	coord: 2..135 score: 8.6

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009733	response to auxin

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo11764	0.79	Barchart \| Table
Spo11767	0.69	Barchart \| Table
Spo11792	0.69	Barchart \| Table
Spo11794	0.69	Barchart \| Table
Spo11796	0.68	Barchart \| Table
Spo14074	0.68	Barchart \| Table
Spo21494	0.67	Barchart \| Table
Spo01925	0.67	Barchart \| Table
Spo15250	0.67	Barchart \| Table
Spo09381	0.66	Barchart \| Table