Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATTAAAATATTCCCACTTGCCCATCTGTAAACATGACCACTAACCTTAACTTATTACTATTATTTTTTAAATCAACTAAATTAATTAAACCTCTTTCTTTCCCCTATAATCCCACCATTTACATAATCTCTCACCTCAACACACTTACTCCATCATCATATCATATAAATCTCCTCTTTCTCCCTCCTTTTTTCTTTTGTATTTTTAACCATAAATTTATGACATTCTTCACTTTTTAAGACAACCCTTTTAAATTAATTAAGGATCACATACAATTGATTCTTGTGTTTTGTTTTTGTTTTGTGGTGTCTCCAATTCAATAATTAATCTATATCATGGTTATGGATAATAGACATAGAATGAGTTCATATGTTTCTCATGAACAAGATGACCCTCAGAGCTCATCAGAGAATGGAGCGCCCGACTCTCCATTCTCCGGCGATGACTCTAGAGCCACCGCCACCGCACCTTCTCCGAAGAAAAGGTATGTCCAAAATGTTTATTCAACTTCATTTATTTGTTTGTAATCATCAAAACCTGTCTGGGTTGGTTAGCTCTATTTCAGTTCCCTCAGGCTCATCACGCGAGCCACGAGGGAATTAATGATGAGCTAACCAACCCAAGAATAAACAAACATGTACCATTAATATTTAGAAAGAATAAAACAGACTCAATATTTATTTTTGTATTGAATTTACTTTATTAGTTTTCCCATTTGTATTTTTTGGAATGTAATTAATTATGCTAATCACAATTAATGATGTGTATGGGGAGAGTAGCAGGAGGAGCATACAAAAGAGAGTGGTATCAATTCCAATAGGAGATGTAGATGGATCAAGGAGCAAAGGTGAATCATATCCACCGTCTGATTCATGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGCTCTCCTTATCCCAGGTGTGTATGATTCTATGGTACACCTTGTTGTATGCGATCAAATCTCTGTCTGTGTGTATTTCTTTGTCTTGTGCAAATCACAAATGTTAAGCTCAGGCGCCGGTGTTTGAGCTCAGTTGTAAGAAGGCGTATTTTAGTGTAGAAGGCGGCTGCTGCTAAATTACGCCCTCCCATGGAGTGGTTGGAACCAATCATGGAAGTCACCACGTGCCAATTTACGACCGTGTAACACACGTCGCACCTCTAATAAGAACAAATTTCTAATTCTGAATAAATATTTTTATATAATTTGACGGAGAACCCGATTTTTATTAGATCAAATTATCAAGGGAAATGAATTTTAAATTATTTATTTCCTCAAAAAAAAAATTAAATGATTTATTACATTCATATTTATATTTAATAAAAATATATTTTTTGAATAATTTTAATATTACTTTGATGAAATTGCACCCGTATTAATTAATTTCCATCCTTTTTTTTAATAGTAATTTGAATTTCCATCCTACTTGAATTTTTTTTCGTTGTTGTGATAATTTATACTACCCCATATTAATTAAATTACTCTCAAATGAGAGACAAAATAGAAATTAAGGGTTCATCATATTCTTAAATTCGTGTAAGTCAAATTATAAAAAATTAAATTTGTTTAATTTTTAATTTTCGTAAATACTTATATTGCTATATTTTCTTATCAAACTTAATTTGATCGTCTCTTGCATAATCGTGCTTATAACTCTCTTCCAAATCCATGTAATTTTAATAGATAAAAAAAACCTCCGAAGTTGTATTTATTAAAATCCTGCAACATTTTATATTTATGGTAGTTGGGAGAACATGACAAGATTCTATAACATGTTCTCACGTATGATGTTTGACAATTTGATCATTGATAATATAAATTACTTTAAATGAATATAATCATAACATTATCCATTAACTTGTGTATTCAATTCAATGACTATCATAAAAGAACAAAAAGTAAATTCAATCTAATCGATTACTTAAGAGAAGGATTAATCTTTTGCCCAATGCCCGCCATTTTCCTAAAAGGTAGGAAAAGACTAACTACATGGTAATATACCAAATTTTTATTTTTCCGAAAAAGGTCTATCAAGGTGCAACTCACTTCAGATTAATCAACTCGGGTTAGTATGCTAGACTTTTTAAAAACGGGAGGAAGGGCTTAGGGTCTGCATGCGGTCTTTAAAGTGTTCATAGTGGGTGTATTGAACTCTTCAACCTTTAGATTAGAGAGTGATTAATTTCTTTCATTGGATTAAGTTTATCTTATTGCATTTCACTTATAGTTTAACAGAAAAATATTGTAATAGAGGATACTAAGGGTATACTCGTAATTGTACTATTGTACCATATTATTATATATATGAGTCCCAGGGACCCGTATTAGGGTAAGCCGTACGGGTGCCTGAGACTCATATATATAATAATATGGTACAATAGTACAATTACGAGTATACCTTTAGTATCCTCTATTAATATTATATGTCCGGAATGTATCTAACGTGGTTTCACAGTGTTGCACACGCGTTTTTTTTTTTGGGAAAGCTTATCTTTTCCATCTCTTTCTAGCTAAAATTGTGTACGGAGTAATTGGTTGTTTTACGTGCGCACCAACTCCTCTTTTCCTTTTCACCATGATATAAATGCCGAAATACTCATGTGGTTTTGTTTGTATTCGTTGTAATGTATTTAATTTTCCTAATTTTAATTTTATTTTTATTTTATTTAATTGTAGGGGATATTATCGATGTAGTAGCTCCAAGGGTTGCCCTGCTAGAAAACAAGTAGAAAGGAGCCGTGTGGACCCCAAAATGCTGATAATCACCTATGCTTGTGAACACAATCATGCTCTACCAACTACCAAACACCACCATCACCACCACAACAACCACAATCAAACACCACCACCCAGCAACGCCGTCACGTCAAGTGTTCCCTCTCCCGAGACTCCACCTGCATCTATAACTCCGTCTGATTCCACCGAGGACGGTAGCGAGGAACCGTCTCCCTCTCCGTCGTCACCGTTGCACATGAATCCATTTGGTGATCCACCTCACTTAGAGTTCGTTGGTGATACTTTGATGTTAGGAAATATTGGGATTGAGTACAATTGGATATCTGATTTGTCATTCTACACGCCGGCTCTTGTGGGCCCCAAATGTGATGATACTGACGTGGCAACATTTCCAATGAAAGAGGAAGATGAGTCCTTATTTGGTGACTTGGATGAACTCCCTGAATGTTCTTTAGTTTTTCGCCATGCCCAAGGAAGCATCGACACGTGTACCACCGCCACTCCGATATGTGGTAGTACATGATAAAGGGGGGAAAAAACTTGATTTTGTAAAATTTTTTTTACTACTTCCTTCGTTTCAAAATAGTTGAAATTCTTTTAAATATCATAAATCGGTTTATTTCTGACAACCAAAATTAAAGAGGAGCAGTTATTTTGAAGCGAAGGAAGTAGTATTATTTTTAAACTCACCGTTAGTCGTCTTGGTTGGGTTTTGCAAATTTATGGTGATTTTTAGTTGTTAATGGAACACCAAGATGTGTTGTTAATTATACTATACTACAAAGAGTTGATGAATGATCCACGGAATTCAC AATTAAAATATTCCCACTTGCCCATCTGTAAACATGACCACTAACCTTAACTTATTACTATTATTTTTTAAATCAACTAAATTAATTAAACCTCTTTCTTTCCCCTATAATCCCACCATTTACATAATCTCTCACCTCAACACACTTACTCCATCATCATATCATATAAATCTCCTCTTTCTCCCTCCTTTTTTCTTTTGTATTTTTAACCATAAATTTATGACATTCTTCACTTTTTAAGACAACCCTTTTAAATTAATTAAGGATCACATACAATTGATTCTTGTGTTTTGTTTTTGTTTTGTGGTGTCTCCAATTCAATAATTAATCTATATCATGGTTATGGATAATAGACATAGAATGAGTTCATATGTTTCTCATGAACAAGATGACCCTCAGAGCTCATCAGAGAATGGAGCGCCCGACTCTCCATTCTCCGGCGATGACTCTAGAGCCACCGCCACCGCACCTTCTCCGAAGAAAAGCAGGAGGAGCATACAAAAGAGAGTGGTATCAATTCCAATAGGAGATGTAGATGGATCAAGGAGCAAAGGTGAATCATATCCACCGTCTGATTCATGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGCTCTCCTTATCCCAGGGGATATTATCGATGTAGTAGCTCCAAGGGTTGCCCTGCTAGAAAACAAGTAGAAAGGAGCCGTGTGGACCCCAAAATGCTGATAATCACCTATGCTTGTGAACACAATCATGCTCTACCAACTACCAAACACCACCATCACCACCACAACAACCACAATCAAACACCACCACCCAGCAACGCCGTCACGTCAAGTGTTCCCTCTCCCGAGACTCCACCTGCATCTATAACTCCGTCTGATTCCACCGAGGACGGTAGCGAGGAACCGTCTCCCTCTCCGTCGTCACCGTTGCACATGAATCCATTTGGTGATCCACCTCACTTAGAGTTCGTTGGTGATACTTTGATGTTAGGAAATATTGGGATTGAGTACAATTGGATATCTGATTTGTCATTCTACACGCCGGCTCTTGTGGGCCCCAAATGTGATGATACTGACGTGGCAACATTTCCAATGAAAGAGGAAGATGAGTCCTTATTTGGTGACTTGGATGAACTCCCTGAATGTTCTTTAGTTTTTCGCCATGCCCAAGGAAGCATCGACACGTGTACCACCGCCACTCCGATATGTGGTAGTACATGATAAAGGGGGGAAAAAACTTGATTTTGTAAAATTTTTTTTACTACTTCCTTCGTTTCAAAATAGTTGAAATTCTTTTAAATATCATAAATCGGTTTATTTCTGACAACCAAAATTAAAGAGGAGCAGTTATTTTGAAGCGAAGGAAGTAGTATTATTTTTAAACTCACCGTTAGTCGTCTTGGTTGGGTTTTGCAAATTTATGGTGATTTTTAGTTGTTAATGGAACACCAAGATGTGTTGTTAATTATACTATACTACAAAGAGTTGATGAATGATCCACGGAATTCAC ATGGTTATGGATAATAGACATAGAATGAGTTCATATGTTTCTCATGAACAAGATGACCCTCAGAGCTCATCAGAGAATGGAGCGCCCGACTCTCCATTCTCCGGCGATGACTCTAGAGCCACCGCCACCGCACCTTCTCCGAAGAAAAGCAGGAGGAGCATACAAAAGAGAGTGGTATCAATTCCAATAGGAGATGTAGATGGATCAAGGAGCAAAGGTGAATCATATCCACCGTCTGATTCATGGGCTTGGAGAAAGTACGGTCAGAAACCCATCAAAGGCTCTCCTTATCCCAGGGGATATTATCGATGTAGTAGCTCCAAGGGTTGCCCTGCTAGAAAACAAGTAGAAAGGAGCCGTGTGGACCCCAAAATGCTGATAATCACCTATGCTTGTGAACACAATCATGCTCTACCAACTACCAAACACCACCATCACCACCACAACAACCACAATCAAACACCACCACCCAGCAACGCCGTCACGTCAAGTGTTCCCTCTCCCGAGACTCCACCTGCATCTATAACTCCGTCTGATTCCACCGAGGACGGTAGCGAGGAACCGTCTCCCTCTCCGTCGTCACCGTTGCACATGAATCCATTTGGTGATCCACCTCACTTAGAGTTCGTTGGTGATACTTTGATGTTAGGAAATATTGGGATTGAGTACAATTGGATATCTGATTTGTCATTCTACACGCCGGCTCTTGTGGGCCCCAAATGTGATGATACTGACGTGGCAACATTTCCAATGAAAGAGGAAGATGAGTCCTTATTTGGTGACTTGGATGAACTCCCTGAATGTTCTTTAGTTTTTCGCCATGCCCAAGGAAGCATCGACACGTGTACCACCGCCACTCCGATATGTGGTAGTACATGA MVMDNRHRMSSYVSHEQDDPQSSSENGAPDSPFSGDDSRATATAPSPKKSRRSIQKRVVSIPIGDVDGSRSKGESYPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKGCPARKQVERSRVDPKMLIITYACEHNHALPTTKHHHHHHNNHNQTPPPSNAVTSSVPSPETPPASITPSDSTEDGSEEPSPSPSSPLHMNPFGDPPHLEFVGDTLMLGNIGIEYNWISDLSFYTPALVGPKCDDTDVATFPMKEEDESLFGDLDELPECSLVFRHAQGSIDTCTTATPICGST Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo11024.1 vs. NCBI nr
Match: gi|902214038|gb|KNA17411.1| (hypothetical protein SOVF_080250 [Spinacia oleracea]) HSP 1 Score: 591.7 bits (1524), Expect = 7.200e-166 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 1
BLAST of Spo11024.1 vs. NCBI nr
Match: gi|731356526|ref|XP_010689722.1| (PREDICTED: probable WRKY transcription factor 69 isoform X1 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 465.7 bits (1197), Expect = 6.000e-128 Identity = 243/302 (80.46%), Postives = 260/302 (86.09%), Query Frame = 1
BLAST of Spo11024.1 vs. NCBI nr
Match: gi|731356528|ref|XP_010689723.1| (PREDICTED: probable WRKY transcription factor 69 isoform X2 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 459.5 bits (1181), Expect = 4.300e-126 Identity = 242/302 (80.13%), Postives = 259/302 (85.76%), Query Frame = 1
BLAST of Spo11024.1 vs. NCBI nr
Match: gi|225446682|ref|XP_002277383.1| (PREDICTED: probable WRKY transcription factor 65 [Vitis vinifera]) HSP 1 Score: 272.7 bits (696), Expect = 7.400e-70 Identity = 153/279 (54.84%), Postives = 184/279 (65.95%), Query Frame = 1
BLAST of Spo11024.1 vs. NCBI nr
Match: gi|659110566|ref|XP_008455292.1| (PREDICTED: probable WRKY transcription factor 69 isoform X1 [Cucumis melo]) HSP 1 Score: 263.1 bits (671), Expect = 5.900e-67 Identity = 156/284 (54.93%), Postives = 193/284 (67.96%), Query Frame = 1
BLAST of Spo11024.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RD04_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_080250 PE=4 SV=1) HSP 1 Score: 591.7 bits (1524), Expect = 5.000e-166 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 1
BLAST of Spo11024.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BLH3_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g208900 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 4.200e-128 Identity = 243/302 (80.46%), Postives = 260/302 (86.09%), Query Frame = 1
BLAST of Spo11024.1 vs. UniProtKB/TrEMBL
Match: E7CEY2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=WRKY47 PE=2 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.600e-66 Identity = 154/283 (54.42%), Postives = 194/283 (68.55%), Query Frame = 1
BLAST of Spo11024.1 vs. UniProtKB/TrEMBL
Match: A0A0D6DR54_HUMLU (WRKY transcription factor OS=Humulus lupulus GN=Wrky3 PE=2 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 2.000e-58 Identity = 142/292 (48.63%), Postives = 176/292 (60.27%), Query Frame = 1
BLAST of Spo11024.1 vs. UniProtKB/TrEMBL
Match: D7TJP4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_10s0003g01600 PE=4 SV=1) HSP 1 Score: 234.2 bits (596), Expect = 2.000e-58 Identity = 146/305 (47.87%), Postives = 188/305 (61.64%), Query Frame = 1
BLAST of Spo11024.1 vs. ExPASy Swiss-Prot
Match: WRK69_ARATH (Probable WRKY transcription factor 69 OS=Arabidopsis thaliana GN=WRKY69 PE=2 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 5.500e-49 Identity = 133/276 (48.19%), Postives = 166/276 (60.14%), Query Frame = 1
BLAST of Spo11024.1 vs. ExPASy Swiss-Prot
Match: WRK65_ARATH (Probable WRKY transcription factor 65 OS=Arabidopsis thaliana GN=WRKY65 PE=2 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 9.800e-46 Identity = 120/266 (45.11%), Postives = 154/266 (57.89%), Query Frame = 1
BLAST of Spo11024.1 vs. ExPASy Swiss-Prot
Match: WRK35_ARATH (Probable WRKY transcription factor 35 OS=Arabidopsis thaliana GN=WRKY35 PE=2 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 6.400e-29 Identity = 95/231 (41.13%), Postives = 120/231 (51.95%), Query Frame = 1
BLAST of Spo11024.1 vs. ExPASy Swiss-Prot
Match: WRK14_ARATH (Probable WRKY transcription factor 14 OS=Arabidopsis thaliana GN=WRKY14 PE=2 SV=2) HSP 1 Score: 126.7 bits (317), Expect = 4.100e-28 Identity = 85/171 (49.71%), Postives = 96/171 (56.14%), Query Frame = 1
BLAST of Spo11024.1 vs. ExPASy Swiss-Prot
Match: WRK22_ARATH (WRKY transcription factor 22 OS=Arabidopsis thaliana GN=WRKY22 PE=2 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.200e-22 Identity = 60/105 (57.14%), Postives = 70/105 (66.67%), Query Frame = 1
BLAST of Spo11024.1 vs. TAIR (Arabidopsis)
Match: AT3G58710.1 (WRKY DNA-binding protein 69) HSP 1 Score: 202.2 bits (513), Expect = 4.300e-52 Identity = 134/276 (48.55%), Postives = 167/276 (60.51%), Query Frame = 1
BLAST of Spo11024.1 vs. TAIR (Arabidopsis)
Match: AT1G29280.1 (WRKY DNA-binding protein 65) HSP 1 Score: 185.3 bits (469), Expect = 5.500e-47 Identity = 120/266 (45.11%), Postives = 154/266 (57.89%), Query Frame = 1
BLAST of Spo11024.1 vs. TAIR (Arabidopsis)
Match: AT2G34830.1 (WRKY DNA-binding protein 35) HSP 1 Score: 129.4 bits (324), Expect = 3.600e-30 Identity = 95/231 (41.13%), Postives = 120/231 (51.95%), Query Frame = 1
BLAST of Spo11024.1 vs. TAIR (Arabidopsis)
Match: AT1G30650.1 (WRKY DNA-binding protein 14) HSP 1 Score: 126.7 bits (317), Expect = 2.300e-29 Identity = 85/171 (49.71%), Postives = 96/171 (56.14%), Query Frame = 1
BLAST of Spo11024.1 vs. TAIR (Arabidopsis)
Match: AT4G01250.1 (WRKY family transcription factor) HSP 1 Score: 108.6 bits (270), Expect = 6.500e-24 Identity = 60/105 (57.14%), Postives = 70/105 (66.67%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo11024.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo11024.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo11024.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 5
BLAST of Spo11024.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 5
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
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