Spo17583 (gene)

Overview
NameSpo17583
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionADP-ribosylation factor
Locationchr5 : 330480 .. 332914 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGCTTTCTTTTGGCAAGCTGTTCAGCAGACTATTCTCGAAGAAGGAGATGCGTATACTTATGGTAGGTCTCGATGCGGCTGGTAAGACCACCATCTTGTATAAGCTCAAGTTGGGAGAAATTGTCACTACCATCCCAACCATTGGTAAGTACATACATCTTCATTGCATTTCAAGTAATAAGGTAAGATCTTATTCTTGATGCTTTCGTTTTTCTTTATTAAACAGGATTTAATGTGGAGACTGTTGAGTACAAGAACATCAGCTTCACTGTGTGGGATGTTGGAGGTCAGGATAAGGTATATACTATATATATTGGTTAGTTGATGCATGCCTCTCTGTACATATTTATTGTAGTAGTCCACCATTTTTAAGAATTACTTGCTTGAACAATCAATGATATTCGAACTGTTTCTGCATTGTTGTTTGGAAGTCAATCCTTGGTAGGAAGCAGAACGAAGAACTCGTTTCTCTCATATAGGAAATTTCTCACTTTCTCAGAGTTGCATTGTTGTTTGGAAGTCAATCCTTGATAGGAAGTCAAACTTAGAGCATTTTTAGCGTCCATGTTATTTGCACGTTTGAGTTGGAGAAGTCTTTAGTGTACGTCCATATCTAAGAAGTCGAGCTACAATTGGGTTAGAGAATACAAGGAGGCATTAACCTCTGACGGGTTGTCTTGATCCCGTGACTACTGACTAGCATTGCATGCTCAAATTGGTGAAGCAAAATGCTGAGCTTTCTCAATTCAGTGCTGCAATTTCTGTGTAAATTTAGTATCTTTCTCATCCTTAATAGTATCTCTATTGCACTAGACTGTGAATTAACCTGGAAAAGATAGAATGTTACTAATTGCATTCAGAAGAATCATTTGGGATTACGGAGTATATTTTAATACTCATCATTCAATCACCAATTTGAAATAATGAAATTAAATACTTGGATTTCAGATTCGTCCGTTGTGGAGACACTACTTCCAGAACACACAAGGACTCATCTTTGTGGTTGACAGTAATGATAGAGATCGTGTTGTTGAAGCGAGGGATGAGCTTCACCGGATGCTGAATGAGGTAGTTAATTACCCTCTATTACAAATTAACGAGCAATGCACTGCACTGCACTCCATTGCAATGATCACTGAACTGGTTGATTGGGTCCCTTTTTGCAGGATGAACTAAAGGATGCAGTCCTACTAGTGTTTGCTAACAAACAGGATCTTCCAAATGCGATGAATGCAGCAGAAATCACCGACAAGCTCGGTCTCCACTCCCTCCGTCAACGACACTGGTAAATACACTACCCTCTTCTCTCCTCAATCTTGTCCAGTCCAATCCAATCCAATCCAATCCAACCATTCCCCTATCAAGTATCAACAAAATGCCTTATAAGATTACGCTAGACCTGATTGTGCTGGGCGGGCCGGGTTTGTGCTGGGTCGAGACATACAAATCAGCCCATCATGTTGGGCCGATTTTTATGTGCCCAAACCCGCTTTTCCGAGCTTAAAACACCGGGCTTTCGGCCCCGGCCAAATTTATAACAAAAAATGTAGTTTTATGTTGTCCAAATTCCAAAACCGGACAAAATTGTTAAAATTTCTGGCCGAGACGGTCGGGGCCCGAGAATCGGACCTAAAATAATCCCTTGCTCTGAGCAAAATCAAAGTACTAAAACTACTTGAACAGGTACATCCAGAGTACATGTGCAACATCAGGTGAAGGGCTGTATGAGGGTCTAGACTGGTTGTCCAACAACATAGCAAGCAAGGTAAGCTGCAAGCCTGCAATACATGCAATTCACACTCATCAGTGATTATTTAATGGCTTACATCTAATTTCATTCGATTGTCTTGTTCTATTCACAGGCTTAAATGAAAGCATCTCTGGTTCACATTTAGAACGAAGATAGTTGAGTTTTCACCAGCATTTACAGGACTTTTGTTATTACATTACGTTGCAAGTTTTTCATAGCTTAATGTTGTTCAGTGACAGTTTAAGCCATTTGCTTCCTGTAGTCTAAGTTTGAGACATGAGATTGATTAATCAATTACTTGTAATATTATCTTGTCAGAGCTGTTATAGTCCTCTGTCATTCTTTAGAACCTTATTGTAACTCCTTTCATTTTAAAGTTGAAACCATGATAAAATTTGCAGAATTTGGACCAAAAGCTTAAGCTGATGGTTGAAGCCCCAATATTAGTTTTATACTCTATCACGCCCCCTCACATGAAAGCCCTTTGAGCTTGAAGTGTGGATGCAGCATAGGCCTTCTCATACCTAGCGCGAAATATTCCACTTTGAAAGGAGGGGTGGATGAGATTCGAACCCGTGACCTTTGCGTCACGTTGGCTCTGATACCATGTCAAGGGACCAACTCAATCAAAAGCTTAAGCTGATGGTTGAAGCCCCAATATTAGTTTTATACTCTATCAAC

mRNA sequence

ATGGGGCTTTCTTTTGGCAAGCTGTTCAGCAGACTATTCTCGAAGAAGGAGATGCGTATACTTATGGTAGGTCTCGATGCGGCTGGTAAGACCACCATCTTGTATAAGCTCAAGTTGGGAGAAATTGTCACTACCATCCCAACCATTGGATTTAATGTGGAGACTGTTGAGTACAAGAACATCAGCTTCACTGTGTGGGATGTTGGAGGTCAGGATAAGATTCGTCCGTTGTGGAGACACTACTTCCAGAACACACAAGGACTCATCTTTGTGGTTGACAGTAATGATAGAGATCGTGTTGTTGAAGCGAGGGATGAGCTTCACCGGATGCTGAATGAGGATGAACTAAAGGATGCAGTCCTACTAGTGTTTGCTAACAAACAGGATCTTCCAAATGCGATGAATGCAGCAGAAATCACCGACAAGCTCGGTCTCCACTCCCTCCGTCAACGACACTGGTACATCCAGAGTACATGTGCAACATCAGGTGAAGGGCTGTATGAGGGTCTAGACTGGTTGTCCAACAACATAGCAAGCAAGGCTTAAATGAAAGCATCTCTGGTTCACATTTAGAACGAAGATAGTTGAGTTTTCACCAGCATTTACAGGACTTTTGTTATTACATTACGTTGCAAGTTTTTCATAGCTTAATGTTGTTCAGTGACAGTTTAAGCCATTTGCTTCCTGTAGTCTAAGTTTGAGACATGAGATTGATTAATCAATTACTTGTAATATTATCTTGTCAGAGCTGTTATAGTCCTCTGTCATTCTTTAGAACCTTATTGTAACTCCTTTCATTTTAAAGTTGAAACCATGATAAAATTTGCAGAATTTGGACCAAAAGCTTAAGCTGATGGTTGAAGCCCCAATATTAGTTTTATACTCTATCACGCCCCCTCACATGAAAGCCCTTTGAGCTTGAAGTGTGGATGCAGCATAGGCCTTCTCATACCTAGCGCGAAATATTCCACTTTGAAAGGAGGGGTGGATGAGATTCGAACCCGTGACCTTTGCGTCACGTTGGCTCTGATACCATGTCAAGGGACCAACTCAATCAAAAGCTTAAGCTGATGGTTGAAGCCCCAATATTAGTTTTATACTCTATCAAC

Coding sequence (CDS)

ATGGGGCTTTCTTTTGGCAAGCTGTTCAGCAGACTATTCTCGAAGAAGGAGATGCGTATACTTATGGTAGGTCTCGATGCGGCTGGTAAGACCACCATCTTGTATAAGCTCAAGTTGGGAGAAATTGTCACTACCATCCCAACCATTGGATTTAATGTGGAGACTGTTGAGTACAAGAACATCAGCTTCACTGTGTGGGATGTTGGAGGTCAGGATAAGATTCGTCCGTTGTGGAGACACTACTTCCAGAACACACAAGGACTCATCTTTGTGGTTGACAGTAATGATAGAGATCGTGTTGTTGAAGCGAGGGATGAGCTTCACCGGATGCTGAATGAGGATGAACTAAAGGATGCAGTCCTACTAGTGTTTGCTAACAAACAGGATCTTCCAAATGCGATGAATGCAGCAGAAATCACCGACAAGCTCGGTCTCCACTCCCTCCGTCAACGACACTGGTACATCCAGAGTACATGTGCAACATCAGGTGAAGGGCTGTATGAGGGTCTAGACTGGTTGTCCAACAACATAGCAAGCAAGGCTTAA

Protein sequence

MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17583.1Spo17583.1mRNA


Homology
[Close]
BLAST of Spo17583.1 vs. NCBI nr
Match: gi|902223836|gb|KNA19609.1| (hypothetical protein SOVF_060060 [Spinacia oleracea])

HSP 1 Score: 366.7 bits (940), Expect = 2.300e-98
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. NCBI nr
Match: gi|320089750|pdb|3AQ4|A (Chain A, Molecular Insights Into Plant Cell Proliferation Disturbance By Agrobacterium Protein 6b)

HSP 1 Score: 364.4 bits (934), Expect = 1.200e-97
Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFGKLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 4   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 63

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 64  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 123

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK
Sbjct: 124 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 183

Query: 181 A 182
           A
Sbjct: 184 A 184
[Close]
BLAST of Spo17583.1 vs. NCBI nr
Match: gi|15226521|ref|NP_182239.1| (ADP-ribosylation factor 1 [Arabidopsis thaliana])

HSP 1 Score: 364.4 bits (934), Expect = 1.200e-97
Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFGKLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. NCBI nr
Match: gi|565468076|ref|XP_006291918.1| (hypothetical protein CARUB_v10018102mg [Capsella rubella])

HSP 1 Score: 363.2 bits (931), Expect = 2.600e-97
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFGKLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. NCBI nr
Match: gi|326510419|dbj|BAJ87426.1| (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 363.2 bits (931), Expect = 2.600e-97
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGL+FGKLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLAFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RL33_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_060060 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 1.600e-98
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. UniProtKB/TrEMBL
Match: A0A078DZX3_BRANA (BnaC04g21380D protein OS=Brassica napus GN=BnaC04g21380D PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.800e-97
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFGKLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. UniProtKB/TrEMBL
Match: R0FRI1_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10018102mg PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.800e-97
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFGKLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. UniProtKB/TrEMBL
Match: V4LMY9_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10001656mg PE=3 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.800e-97
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFGKLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. UniProtKB/TrEMBL
Match: Q6EFV6_BRAJU (ARF-like small GTPase OS=Brassica juncea PE=2 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.800e-97
Identity = 178/181 (98.34%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFGKLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. ExPASy Swiss-Prot
Match: ARF1_ARATH (ADP-ribosylation factor 1 OS=Arabidopsis thaliana GN=ARF1 PE=1 SV=2)

HSP 1 Score: 364.4 bits (934), Expect = 7.300e-100
Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFGKLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. ExPASy Swiss-Prot
Match: ARF2A_ARATH (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana GN=ARF2-A PE=2 SV=2)

HSP 1 Score: 360.5 bits (924), Expect = 1.100e-98
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSF KLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. ExPASy Swiss-Prot
Match: ARF2B_ARATH (ADP-ribosylation factor 2-B OS=Arabidopsis thaliana GN=ARF2-B PE=2 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 1.100e-98
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSF KLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. ExPASy Swiss-Prot
Match: ARF_VIGUN (ADP-ribosylation factor OS=Vigna unguiculata GN=ARF PE=2 SV=3)

HSP 1 Score: 359.8 bits (922), Expect = 1.800e-98
Identity = 177/181 (97.79%), Postives = 180/181 (99.45%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSF KLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGL+WLSNNIASK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLEWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. ExPASy Swiss-Prot
Match: ARF1_ORYSJ (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 358.6 bits (919), Expect = 4.000e-98
Identity = 176/181 (97.24%), Postives = 180/181 (99.45%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGL+F KLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. TAIR (Arabidopsis)
Match: AT2G47170.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 364.4 bits (934), Expect = 4.100e-101
Identity = 179/181 (98.90%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFGKLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. TAIR (Arabidopsis)
Match: AT3G62290.1 (ADP-ribosylation factor A1E)

HSP 1 Score: 362.1 bits (928), Expect = 2.000e-100
Identity = 177/181 (97.79%), Postives = 181/181 (100.00%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSFGKLFS+LF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFGKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. TAIR (Arabidopsis)
Match: AT1G10630.1 (ADP-ribosylation factor A1F)

HSP 1 Score: 362.1 bits (928), Expect = 2.000e-100
Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSF KLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. TAIR (Arabidopsis)
Match: AT1G70490.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 360.5 bits (924), Expect = 5.900e-100
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSF KLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
[Close]
BLAST of Spo17583.1 vs. TAIR (Arabidopsis)
Match: AT1G23490.1 (ADP-ribosylation factor 1)

HSP 1 Score: 360.5 bits (924), Expect = 5.900e-100
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 1 

		  

Query: 1   MGLSFGKLFSRLFSKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60
           MGLSF KLFSRLF+KKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN
Sbjct: 1   MGLSFAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKN 60

Query: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELKDAV 120
           ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDEL+DAV
Sbjct: 61  ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAV 120

Query: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASK 180
           LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA K
Sbjct: 121 LLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGK 180

Query: 181 A 182
           A
Sbjct: 181 A 181
The following BLAST results are available for this feature:
BLAST of Spo17583.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902223836|gb|KNA19609.1|2.3e-98100.hypothetical protein SOVF_0600... [more]
gi|320089750|pdb|3AQ4|A1.2e-9798.9Chain A, Molecular Insights In... [more]
gi|15226521|ref|NP_182239.1|1.2e-9798.9ADP-ribosylation factor 1 [Ara... [more]
gi|565468076|ref|XP_006291918.1|2.6e-9798.3hypothetical protein CARUB_v10... [more]
gi|326510419|dbj|BAJ87426.1|2.6e-9798.3predicted protein [Hordeum vul... [more]
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BLAST of Spo17583.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RL33_SPIOL1.6e-98100.Uncharacterized protein OS=Spi... [more]
A0A078DZX3_BRANA1.8e-9798.3BnaC04g21380D protein OS=Brass... [more]
R0FRI1_9BRAS1.8e-9798.3Uncharacterized protein OS=Cap... [more]
V4LMY9_EUTSA1.8e-9798.3Uncharacterized protein OS=Eut... [more]
Q6EFV6_BRAJU1.8e-9798.3ARF-like small GTPase OS=Brass... [more]
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BLAST of Spo17583.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
ARF1_ARATH7.3e-10098.9ADP-ribosylation factor 1 OS=A... [more]
ARF2A_ARATH1.1e-9897.7ADP-ribosylation factor 2-A OS... [more]
ARF2B_ARATH1.1e-9897.7ADP-ribosylation factor 2-B OS... [more]
ARF_VIGUN1.8e-9897.7ADP-ribosylation factor OS=Vig... [more]
ARF1_ORYSJ4.0e-9897.2ADP-ribosylation factor 1 OS=O... [more]
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BLAST of Spo17583.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5
Match NameE-valueIdentityDescription
AT2G47170.14.1e-10198.9Ras-related small GTP-binding ... [more]
AT3G62290.12.0e-10097.7ADP-ribosylation factor A1E[more]
AT1G10630.12.0e-10098.3ADP-ribosylation factor A1F[more]
AT1G70490.15.9e-10097.7Ras-related small GTP-binding ... [more]
AT1G23490.15.9e-10097.7ADP-ribosylation factor 1[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005225Small GTP-binding protein domainTIGRFAMsTIGR00231TIGR00231coord: 16..157
score: 1.0
IPR006689Small GTPase superfamily, ARF/SAR typePRINTSPR00328SAR1GTPBPcoord: 74..99
score: 1.3E-19coord: 47..71
score: 1.3E-19coord: 19..42
score: 1.3E-19coord: 119..140
score: 1.3
IPR006689Small GTPase superfamily, ARF/SAR typePFAMPF00025Arfcoord: 6..177
score: 3.5
IPR024156Small GTPase superfamily, ARF typePROFILEPS51417ARFcoord: 11..177
score: 25
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 16..179
score: 2.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..178
score: 1.74
NoneNo IPR availablePANTHERPTHR11711ADP RIBOSYLATION FACTOR-RELATEDcoord: 1..180
score: 2.7E
NoneNo IPR availablePANTHERPTHR11711:SF181ADP-RIBOSYLATION FACTOR A1Fcoord: 1..180
score: 2.7E
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..180
score: 0.
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..181
score: 2.3E
NoneNo IPR availableSMARTSM00178sar_sub_1coord: 1..177
score: 2.7

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006886 intracellular protein transport
biological_process GO:0052541 plant-type cell wall cellulose metabolic process
biological_process GO:0019852 L-ascorbic acid metabolic process
biological_process GO:0052546 cell wall pectin metabolic process
biological_process GO:0006499 N-terminal protein myristoylation
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0009117 nucleotide metabolic process
biological_process GO:0045489 pectin biosynthetic process
biological_process GO:0005982 starch metabolic process
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0005985 sucrose metabolic process
biological_process GO:0007264 small GTPase mediated signal transduction
biological_process GO:0046686 response to cadmium ion
biological_process GO:0043085 positive regulation of catalytic activity
biological_process GO:0055114 oxidation-reduction process
cellular_component GO:0000139 Golgi membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005802 trans-Golgi network
cellular_component GO:0009505 plant-type cell wall
cellular_component GO:0048046 apoplast
cellular_component GO:0005622 intracellular
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005886 plasma membrane
cellular_component GO:0005798 Golgi-associated vesicle
cellular_component GO:0005768 endosome
cellular_component GO:0005829 cytosol
molecular_function GO:0016004 phospholipase activator activity
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0008447 L-ascorbate oxidase activity
molecular_function GO:0005507 copper ion binding
molecular_function GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity
RNA-Seq Expression
   



Co-expression
Gener valueExpression
Spo260670.77Barchart | Table
Spo238320.67Barchart | Table
Spo245930.67Barchart | Table
Spo123000.66Barchart | Table
Spo168600.66Barchart | Table
Spo232140.66Barchart | Table