Spo17687 (gene)

Overview
NameSpo17687
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr5 : 630848 .. 631151 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTTTGGGGGTGTCCATCTTGTGTCTAATGTGGGTGTTCTTTTCGGGAGTGATGCGGTGGTCGAGCATGTCAGAAAAGGGCTGATGGAAAGCAGCATATGCGCACACACATGTTCTCGGCTAATGTCTTCTTCTGTCTTTTAAGTGTTCCATAACTGCAGTTTGATCATATTGATTTTCTCTGCAATTGTGCACTTTAGTATTTCATATCGTCGATATCGAGTCTTACAAGACAGCATTTTGGGGGTTTTGGGAAGTGTTCCATTACTGCAGTTTGATTGTTGACCTGTTCTGCAATTAA

mRNA sequence

ATGCATTTTGGGGGTGTCCATCTTGTGTCTAATGTGGGTGTTCTTTTCGGGAGTGATGCGGTGGTCGAGCATGTCAGAAAAGGGCTGATGGAAAGCAGCATATGCGCACACACATTATTTCATATCGTCGATATCGAGTCTTACAAGACAGCATTTTGGGGGTTTTGGGAAGTGTTCCATTACTGCAGTTTGATTGTTGACCTGTTCTGCAATTAA

Coding sequence (CDS)

ATGCATTTTGGGGGTGTCCATCTTGTGTCTAATGTGGGTGTTCTTTTCGGGAGTGATGCGGTGGTCGAGCATGTCAGAAAAGGGCTGATGGAAAGCAGCATATGCGCACACACATTATTTCATATCGTCGATATCGAGTCTTACAAGACAGCATTTTGGGGGTTTTGGGAAGTGTTCCATTACTGCAGTTTGATTGTTGACCTGTTCTGCAATTAA

Protein sequence

MHFGGVHLVSNVGVLFGSDAVVEHVRKGLMESSICAHTLFHIVDIESYKTAFWGFWEVFHYCSLIVDLFCN
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo17687.1Spo17687.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo17687.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17687.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17687.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo17687.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0006096 glycolytic process
biological_process GO:0009165 nucleotide biosynthetic process
biological_process GO:0006457 protein folding
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
biological_process GO:0044262 cellular carbohydrate metabolic process
biological_process GO:0046487 glyoxylate metabolic process
biological_process GO:0006108 malate metabolic process
biological_process GO:0019643 reductive tricarboxylic acid cycle
biological_process GO:0006568 tryptophan metabolic process
biological_process GO:0046486 glycerolipid metabolic process
biological_process GO:0006071 glycerol metabolic process
biological_process GO:0016310 phosphorylation
biological_process GO:0030244 cellulose biosynthetic process
biological_process GO:0033356 UDP-L-arabinose metabolic process
biological_process GO:0044070 regulation of anion transport
biological_process GO:0055085 transmembrane transport
biological_process GO:0006396 RNA processing
biological_process GO:0006094 gluconeogenesis
biological_process GO:0006950 response to stress
biological_process GO:0006099 tricarboxylic acid cycle
biological_process GO:0006508 proteolysis
biological_process GO:0006446 regulation of translational initiation
biological_process GO:0006554 lysine catabolic process
biological_process GO:0044238 primary metabolic process
biological_process GO:0019243 methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
biological_process GO:0044260 cellular macromolecule metabolic process
cellular_component GO:0005622 intracellular
cellular_component GO:0005741 mitochondrial outer membrane
cellular_component GO:0005794 Golgi apparatus
cellular_component GO:0005739 mitochondrion
cellular_component GO:0016020 membrane
cellular_component GO:0009506 plasmodesma
cellular_component GO:0005737 cytoplasm
cellular_component GO:0045252 oxoglutarate dehydrogenase complex
cellular_component GO:0005829 cytosol
cellular_component GO:0009840 chloroplastic endopeptidase Clp complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0005774 vacuolar membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0005840 ribosome
molecular_function GO:0008308 voltage-gated anion channel activity
molecular_function GO:0003746 translation elongation factor activity
molecular_function GO:0052691 UDP-arabinopyranose mutase activity
molecular_function GO:0008466 glycogenin glucosyltransferase activity
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0050897 cobalt ion binding
molecular_function GO:0005524 ATP binding
molecular_function GO:0004371 glycerone kinase activity
molecular_function GO:0004386 helicase activity
molecular_function GO:0003743 translation initiation factor activity
molecular_function GO:0030060 L-malate dehydrogenase activity
molecular_function GO:0004591 oxoglutarate dehydrogenase (succinyl-transferring) activity
molecular_function GO:0030976 thiamine pyrophosphate binding
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0051082 unfolded protein binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity
RNA-Seq Expression