Spo02222 (gene)

Overview
NameSpo02222
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionBnaC08g05480D protein
Locationchr5 : 3983871 .. 3989206 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAACGACGTCGCAACATCACCGCGCTGAATCACCATCTTCAACCTCCTTTTGGGGCGCCAACTCGCAAACTGTCCCAATCAGTTCATTTCGTAACTATAACCAGAAACCTCAATAAATCAAATCCTCTTTTGTAATTTAGGGTTTTGAAACCCCATAAATTGTTGAATCGTAAAAAAAACAATCCTCTTCAATAAAAAATAAGCGGGAAATTCTGTCGAAAATGGAGGTTAAAAAGAAGCAATTGAAGCCAGAAAGACAACCCCTCAAAACCCTTAATCATATTTCATGGAAAGAAAAGGTAAAAGTTCTTCAATTTAACCCTTAATTATTTACAGATTCCATTTAATTGAATGGGTGTTCTTCAATTCATGTTTCTAATGTAGCTTATTGTCCTTTGTTTGATTTTTTTTTTTTTTTTTCTGGAAATAATTTAGTTTTGGTTATCTGGGTTTGTTTGAATGGAAGAGTAGTTGAAGGAGAGCTGTTATCGGAGGGTAAAGGAAAACCGAACCCGCCTTCTATGGAATTCTAGATCACCTCTTCATCAATCCTCCACCCAAAAGGTTTGTTCTTCAACTACAGATATATTGATATGATTCATATTTGTGCTTTTTATTTCTGAATGAGCTCACCACCAATAGAATCAAGATAGCTTACACTTGTTAATTAGAATGTGAAACTATAGAACATTTGCTATATAGAGGAATTTCTAGGAGTCACTTGGATTTTTGAGGTGCTTGAGAAATTTAAAATGCATTAAACAATGTTAATGTAGGGTGGACAATAGGTAGTTAGGTATCTAGTGGAGGTGCTAGGGTTTGATGTGCAACGAGCCAACGAGGCGGTTAGCCAATATAAAGGGTAGGAGGGGTTGCTTGAAAAAGCAGAGGCGAATAATCAAAGGAGGTTGAAATGAGGGAGGGAAAGTGAAAGGAGAGAAGAGGGACTGAGTGCGAGTTGTGGTAGGAGGAGAGTAGAATCAAGAACAAGCTACAAAATTTTTTGTGAAGATTGTTAACTAAAGGTGGGTATTCCCGTATTCGGCATTTCTTATTTGGTACATAGACTTTTAGAGCTTCCAAACTCCGGATGAACAACTACTGTTAGATCAGTTTGGGAAGATAAAGATGGTTGTTTATATTGTTAGGCTGTGCTCTTTGTGGTTCCAGGCTTCCAGCTGACACCACACTGTTTCTTGTTTGCAAAGGTGAGATGTTGTCTGTTATGTTTGCGCAGCAGTGCAGTGGTAGAGCCTTTTTCATGGTGCCATCCCTACAGAAATCAAGTGTAATGATACATTTAAAATTAAACAATGGAAGGTCTTGATGTTTCATAGATGCTGTTGATGGATGGAATCGGCTGTGAAATGTTGGGATTGGTTCAATAGTCTGAATATTAATATATCCGTAGATGCTCCTGTGACCCTGTCCACTGGGTCCGAGAGAAGTTATAAATACAGGTATGCTATAGAACACCGAACTTTGGGTATGACTATGTTGGATGTTAAAAATAACCCGGGTATAGATATTGGATGAAATCTCAATTCTAGAAGAAATCGAAGAATAACTGGGTTATTTTTTCTCAGAAATACAAGTATGCTATAGAGCACATGTAATATGGTTTAGAACACTGAACTTTGAGGAAGGCTGTGTAAGATATTAGGAGGTTTGGTTTTCTTTCCCTGATTTTTGGGTCAAAATTCATTTTCAGGAAGAGAAGAATACTGATTTTGAGCTCTTACATGTACTTCTTGTTGCTTCTTAATTCTCCACACGACTTGTTATTCTTTTCCGCAATTTATATTTTTTGTTTCCAATATCTGTTTCTTCAAAGATGTCAGATGATTTTGAACTTAGAAGCATTGTTTAAGAAGAAATATTTCCTTTCATGAATTGTTTGCAGGAATTCCTCAAGTCTGCTTTCGAGGATATAGTGTCTGACGAGTTGAATAAGATAAAGAACCAGCATTCTGATGCTTCAGAAGTTCAAACTTCGTTATCTGGAGATGATGACATTTTGTGGGAATATGATAGTCACCGTACGGATGATAAAGCTGAATGTGAAGAGATATTGCTAGAAATGCAAAGGATCTTCTATGAGGATATCAGTTTGGAGTTGAGTCAAAAAGGTAAGCTCTATCCCCTCTCGAAACGAAGAGGAGCAAATTACTGTTGGTTTTCCTGGAACACTTATGACATCGTTGCCCGCCAAAAATAAAGGGAAAATATATCTAGAAACTAGATATGTTTATTTGAATAGTGTTTTGAGTCTGACATTGGTTCTAGTCTTTCCCAGAAGCAGAGAGATCTGTTGTTTTGGAGGATGAAGAAGATGAGTACTTGGCATTTGCAGTTAATCAGCATATGCAGTTGAATGATGGAAAGGTATGTCACTAGTAAGTAGAGAGTTAGAAAAGTGTGTGGTAGTTCTAGTTGCAGTTTCTTCAAAATAGTTTCTTTGGGTTAGCTCATGCCAATTATAATTCAATAACAAAGTGAAAAAAAAAGCCTGATGTCCCATGTAAATGTTTTTGGAACAGTCGCAGGATATCTTTTCATTATGTGATATATCATTTCATTATTTTGTTGCCTGTCTACTTATAGATGGAAGCATTTGGCATTCATTCGATTGCTTGTTTTTTGAGATGTGAATTTCCTAATTCCTGGATTTACAGTGTGATACCCTGAATCCCTGATAGTCAAGAACAACTGATGTTGCTTTATCTTTGCAATTAATCTTCGATGCTTCAAAATATTGTATTTGTTTGTATGCATTGGAAACTTGTCTTGTAGATGTAATTCATATCCTTCAACAAAACTATTAAGGAGAACTAGTATTGATCCCGTGTCATGCACGGCTTTTGTTTTGTTTTAAAAGCGAGTTTAACTTTTTAATTCAACAAAAAATGAGTAAATGAATTTCATTCCGTGTTTCACTAAGAAAACAACGAAGATAGAAATATAATTGGTATATTTCTTGAAATTAATAGAAAAATTTAAAGATAAAGGGGCATGAAATGTATTGGAGGTGAAGGGGCATGACTTCTTTTTTTGTGGTGAAGAGACATGACTTTTTTTTTGTGGTGAAGAGGAATGAAATTGGAGAAGGAAGGGACAAGAAATTTTAAAAAAATAAAATGGGAAGATATTTGCAAGGAAGGACATGTGGCACTCCACATTTCTTGCAAATTTTCCTGTTATTAAATATTAGTATAGATATGGACTCACCAACATCAGGTTTTGCAAACCTCACCAAAAGCTCAAATATCTAATATAGCTAGTGTTGAGATTTCATGGACCATAAAAGAGACTTCATGTATGGGCAAAAAGGTTCAATTGTATAATACTGTTATGTCCTCAAGATGCAGGATCCCAAGTCAATCATTTGGTCATTCCCACTTCTTTTTTGCACAAAGCAAGAAAAGGATTCCCATTTATCATCTTTATTGTACTGAATGTTGTCAAATAAAAAGGAAGTTACTATAGACAAGGCTGAGTGCTAGTGACATGAGAACATTGCAAAACAGTTGCCTCTCCTAGGTTGATCATGTGATTGAAGAGTATCATCACTTCTTCTGGCATTTTGATTCAATTTGGCCGATGCTCGAAAGTGTTATTCATGTGATAATTTAGATTGTTTGGATCTTGACATCTTTTTGGAAGACCCTGTTTCATTGCATAGTGCTTTGGTATTTTCTAAGTTCTATGAATTGTTTATCTTCTATGCATTGAATTTCTGCAACAAAACAGAATTCATCAAGATGATAACGAGTATCAATTAATTTCCTCAGAGATTACTTTACTACATTCTGTCCTAAAAAAAACAATACTCTTCAGTTACCCTCATTTAAGCAACATAGTAGTCTTTTATGAACCTTTAAAATTTTGGAATTGTGATTCAGTTATTCATTTCATGTAAGACAAACGACAAAGTTTACCATTTGCTTAAATAATGGGTGCTTATTTGTTTATAGTCGTTTCTGCATTTCATTCTTTTACTTTCTTTGACGGTGGTTTCTGCTATTCATTCTTTTTTGCCTTGTGATTCTCTGGTTGTAGGAATGGAAAGAGCAAACCTGGTGCCCAATCTGCAAGAAAGGAGAATTACAAGAGAATCTCCATCTTGTTTATTGCAACCTTTGTCAGTTTACGCTCAACAGGGGAGATCAGGTATTGCAATTATCACTCTGACAGTGTGGATCTCTGTCTTTATCCCGTTTTTATCCTACACAGCCACATTAGTTCTTATTAAAGGTTGTCACGAAAGGTTTCAGGAATTTTTAATGATGGTGAGATAGTCTTTCCTTAAAGTATCTTTATCAGGACCAAGTAAAGCATTTTGCATGAGTTGCCAATTTTAAATCATACGGTCGTAGTAAAAGCATAGAACGATATGGTTACCACTCACTCCCCCTCCCCCTCCCCCCAAAAAGAAGAGGTAGGTAGTTAGCTCTCTAGTGTGCTTTTCTTGGAGATACTTTGTTTGGTGGTAAACCAACACAAGTTGGTGGGGAACTCACCTTGTGACTTGGAGGTCACAGGGTCGAGCCCCATCAGCTGCGAAATGCTTTGGGAGTGGCTCAAGCAAAGACCTGCGTAGCGGCTAACCTGTGATAGGTGCTGATTCAGTAGGGTCTCTTCTTCTTACCTTTAAAAAAAAAAACGTTGTTTGGTGGTTTCAATGTTAACGAACCCTGGGACCCTTTGTTCTTATGGTTATTGCTGATTCCAATAAACGGTATTTTACTTCTCGGAGAGTAGGGATGAAAATGGGTCGAATCAGACCACTGGACCCTACTTTTTCCGGATATGGTCCAGTTTATTTTTCATTACCATGTTCTGGAATTAGTACAACTCTATTTGTGGCTTGTTTGTGAAGATTTGATCAAAACCCTCATCTAAGTATTTGTTTATAACACCAATACCATCTGCCTGATAGGTTAATTTGAGCTTGTTGAAGGATCGGCTAGCAGAAGCTCATGAAGAACATCTTGATAGAGGTTGCAGATCAAAACCCGAGTTCTGTATCGAGACTGTATTTGATCTGACCGCGCTGTACATTCAATGTCAGCATTGTGATACATTTGAGATTGTAATATAAGCAGGATTTTGTGTATCTTGTATTTAAAACTTTTTCTTTGAAAATTACCGCGTGTGAAGTATTGTTTTCCTTCCCATTTTCTCGAGGATTTTTTGTATTGTACAAGCAACAATTTTTTAGGTCAATGTATGATGTGTTGTTGGGCTGTTGCTGTTTTTGTTGTTTGTTACCCGAAATCAAAATTCCTTTGTTACCTAACCATACTCTTTTTGATGGACAAAACATACACCACA

mRNA sequence

TAAAACGACGTCGCAACATCACCGCGCTGAATCACCATCTTCAACCTCCTTTTGGGGCGCCAACTCGCAAACTGTCCCAATCAGTTCATTTCGTAACTATAACCAGAAACCTCAATAAATCAAATCCTCTTTTGTAATTTAGGGTTTTGAAACCCCATAAATTGTTGAATCGTAAAAAAAACAATCCTCTTCAATAAAAAATAAGCGGGAAATTCTGTCGAAAATGGAGGTTAAAAAGAAGCAATTGAAGCCAGAAAGACAACCCCTCAAAACCCTTAATCATATTTCATGGAAAGAAAAGTTGAAGGAGAGCTGTTATCGGAGGGTAAAGGAAAACCGAACCCGCCTTCTATGGAATTCTAGATCACCTCTTCATCAATCCTCCACCCAAAAGGAATTCCTCAAGTCTGCTTTCGAGGATATAGTGTCTGACGAGTTGAATAAGATAAAGAACCAGCATTCTGATGCTTCAGAAGTTCAAACTTCGTTATCTGGAGATGATGACATTTTGTGGGAATATGATAGTCACCGTACGGATGATAAAGCTGAATGTGAAGAGATATTGCTAGAAATGCAAAGGATCTTCTATGAGGATATCAGTTTGGAGTTGAGTCAAAAAGAAGCAGAGAGATCTGTTGTTTTGGAGGATGAAGAAGATGAGTACTTGGCATTTGCAGTTAATCAGCATATGCAGTTGAATGATGGAAAGGAATGGAAAGAGCAAACCTGGTGCCCAATCTGCAAGAAAGGAGAATTACAAGAGAATCTCCATCTTGTTTATTGCAACCTTTGTCAGTTTACGCTCAACAGGGGAGATCAGGTTAATTTGAGCTTGTTGAAGGATCGGCTAGCAGAAGCTCATGAAGAACATCTTGATAGAGGTTGCAGATCAAAACCCGAGTTCTGTATCGAGACTGTATTTGATCTGACCGCGCTGTACATTCAATGTCAGCATTGTGATACATTTGAGATTGTAATATAAGCAGGATTTTGTGTATCTTGTATTTAAAACTTTTTCTTTGAAAATTACCGCGTGTGAAGTATTGTTTTCCTTCCCATTTTCTCGAGGATTTTTTGTATTGTACAAGCAACAATTTTTTAGGTCAATGTATGATGTGTTGTTGGGCTGTTGCTGTTTTTGTTGTTTGTTACCCGAAATCAAAATTCCTTTGTTACCTAACCATACTCTTTTTGATGGACAAAACATACACCACA

Coding sequence (CDS)

ATGGAGGTTAAAAAGAAGCAATTGAAGCCAGAAAGACAACCCCTCAAAACCCTTAATCATATTTCATGGAAAGAAAAGTTGAAGGAGAGCTGTTATCGGAGGGTAAAGGAAAACCGAACCCGCCTTCTATGGAATTCTAGATCACCTCTTCATCAATCCTCCACCCAAAAGGAATTCCTCAAGTCTGCTTTCGAGGATATAGTGTCTGACGAGTTGAATAAGATAAAGAACCAGCATTCTGATGCTTCAGAAGTTCAAACTTCGTTATCTGGAGATGATGACATTTTGTGGGAATATGATAGTCACCGTACGGATGATAAAGCTGAATGTGAAGAGATATTGCTAGAAATGCAAAGGATCTTCTATGAGGATATCAGTTTGGAGTTGAGTCAAAAAGAAGCAGAGAGATCTGTTGTTTTGGAGGATGAAGAAGATGAGTACTTGGCATTTGCAGTTAATCAGCATATGCAGTTGAATGATGGAAAGGAATGGAAAGAGCAAACCTGGTGCCCAATCTGCAAGAAAGGAGAATTACAAGAGAATCTCCATCTTGTTTATTGCAACCTTTGTCAGTTTACGCTCAACAGGGGAGATCAGGTTAATTTGAGCTTGTTGAAGGATCGGCTAGCAGAAGCTCATGAAGAACATCTTGATAGAGGTTGCAGATCAAAACCCGAGTTCTGTATCGAGACTGTATTTGATCTGACCGCGCTGTACATTCAATGTCAGCATTGTGATACATTTGAGATTGTAATATAA

Protein sequence

MEVKKKQLKPERQPLKTLNHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSSTQKEFLKSAFEDIVSDELNKIKNQHSDASEVQTSLSGDDDILWEYDSHRTDDKAECEEILLEMQRIFYEDISLELSQKEAERSVVLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPICKKGELQENLHLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETVFDLTALYIQCQHCDTFEIVI
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo02222.1Spo02222.1mRNA


Homology
[Close]
BLAST of Spo02222.1 vs. NCBI nr
Match: gi|902208116|gb|KNA15851.1| (hypothetical protein SOVF_094370 [Spinacia oleracea])

HSP 1 Score: 506.5 bits (1303), Expect = 2.600e-140
Identity = 251/252 (99.60%), Postives = 252/252 (100.00%), Query Frame = 1 

		  

Query: 1   MEVKKKQLKPERQPLKTLNHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSSTQKEFL 60
           MEVKKKQLKPERQPLKTLNHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSSTQKEFL
Sbjct: 1   MEVKKKQLKPERQPLKTLNHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSSTQKEFL 60

Query: 61  KSAFEDIVSDELNKIKNQHSDASEVQTSLSGDDDILWEYDSHRTDDKAECEEILLEMQRI 120
           KSAFEDIVSDELNKIKNQHSDASEVQTSLSGDDDILWEYDSHRTDDKAECEEILLEMQRI
Sbjct: 61  KSAFEDIVSDELNKIKNQHSDASEVQTSLSGDDDILWEYDSHRTDDKAECEEILLEMQRI 120

Query: 121 FYEDISLELSQKEAERSVVLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPICKKGELQE 180
           FYEDISLELSQKEAERSVVLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPICKKGELQE
Sbjct: 121 FYEDISLELSQKEAERSVVLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPICKKGELQE 180

Query: 181 NLHLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETVFDLTALYI 240
           NL+LVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETVFDLTALYI
Sbjct: 181 NLYLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETVFDLTALYI 240

Query: 241 QCQHCDTFEIVI 253
           QCQHCDTFEIVI
Sbjct: 241 QCQHCDTFEIVI 252
[Close]
BLAST of Spo02222.1 vs. NCBI nr
Match: gi|731336032|ref|XP_010679039.1| (PREDICTED: uncharacterized protein LOC104894487 isoform X3 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 408.3 bits (1048), Expect = 9.800e-111
Identity = 202/252 (80.16%), Postives = 227/252 (90.08%), Query Frame = 1 

		  

Query: 1   MEVKKKQLKPERQPLKTLNHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSSTQKEFL 60
           ME KKKQLKPERQPLKTL HISWKEKLKESCYRRVKE+R++LLW+ RSPL+QSS ++E +
Sbjct: 1   MEGKKKQLKPERQPLKTL-HISWKEKLKESCYRRVKEDRSQLLWSFRSPLNQSSAKQESI 60

Query: 61  KSAFEDIVSDELNKIKNQHSDASEVQTSLSGDDDILWEYDSHRTDDKAECEEILLEMQRI 120
           KSAFE IVSDEL KIKNQ+SD+SE  +SLSG+DD+LWEYD  +T +K ECEEILLEMQRI
Sbjct: 61  KSAFEGIVSDELKKIKNQYSDSSEFPSSLSGEDDVLWEYDGTQTANKGECEEILLEMQRI 120

Query: 121 FYEDISLELSQKEAERSVVLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPICKKGELQE 180
           FYEDI LELS+KEAE S++LEDEEDEYLA AVN++MQLND K WKEQ WCP+CKKGELQE
Sbjct: 121 FYEDIRLELSEKEAEESIILEDEEDEYLASAVNEYMQLNDRKSWKEQIWCPVCKKGELQE 180

Query: 181 NLHLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETVFDLTALYI 240
           N HL+YCNLC   LNRGD+VNLSLL+DRLAEAHEEHLDRGCRSKP+FCIETVFDLTALYI
Sbjct: 181 NEHLIYCNLCHLKLNRGDEVNLSLLRDRLAEAHEEHLDRGCRSKPKFCIETVFDLTALYI 240

Query: 241 QCQHCDTFEIVI 253
           QCQ C TFEIVI
Sbjct: 241 QCQLCATFEIVI 251
[Close]
BLAST of Spo02222.1 vs. NCBI nr
Match: gi|731336030|ref|XP_010679038.1| (PREDICTED: uncharacterized protein LOC104894487 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 402.9 bits (1034), Expect = 4.100e-109
Identity = 202/255 (79.22%), Postives = 227/255 (89.02%), Query Frame = 1 

		  

Query: 1   MEVKKKQLKPERQPLKTLNHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSSTQKEFL 60
           ME KKKQLKPERQPLKTL HISWKEKLKESCYRRVKE+R++LLW+ RSPL+QSS ++E +
Sbjct: 1   MEGKKKQLKPERQPLKTL-HISWKEKLKESCYRRVKEDRSQLLWSFRSPLNQSSAKQESI 60

Query: 61  KSAFEDIVSDELNKIKNQHSDASEVQTSLSGDDDILWEYDSHRTDDKAECEEILLEMQRI 120
           KSAFE IVSDEL KIKNQ+SD+SE  +SLSG+DD+LWEYD  +T +K ECEEILLEMQRI
Sbjct: 61  KSAFEGIVSDELKKIKNQYSDSSEFPSSLSGEDDVLWEYDGTQTANKGECEEILLEMQRI 120

Query: 121 FYEDISLELSQK---EAERSVVLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPICKKGE 180
           FYEDI LELS+K   EAE S++LEDEEDEYLA AVN++MQLND K WKEQ WCP+CKKGE
Sbjct: 121 FYEDIRLELSEKAFSEAEESIILEDEEDEYLASAVNEYMQLNDRKSWKEQIWCPVCKKGE 180

Query: 181 LQENLHLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETVFDLTA 240
           LQEN HL+YCNLC   LNRGD+VNLSLL+DRLAEAHEEHLDRGCRSKP+FCIETVFDLTA
Sbjct: 181 LQENEHLIYCNLCHLKLNRGDEVNLSLLRDRLAEAHEEHLDRGCRSKPKFCIETVFDLTA 240

Query: 241 LYIQCQHCDTFEIVI 253
           LYIQCQ C TFEIVI
Sbjct: 241 LYIQCQLCATFEIVI 254
[Close]
BLAST of Spo02222.1 vs. NCBI nr
Match: gi|731336028|ref|XP_010679037.1| (PREDICTED: uncharacterized protein LOC104894487 isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 401.0 bits (1029), Expect = 1.600e-108
Identity = 202/260 (77.69%), Postives = 227/260 (87.31%), Query Frame = 1 

		  

Query: 1   MEVKKKQLKPERQPLKTLNHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSSTQKEFL 60
           ME KKKQLKPERQPLKTL HISWKEKLKESCYRRVKE+R++LLW+ RSPL+QSS ++E +
Sbjct: 1   MEGKKKQLKPERQPLKTL-HISWKEKLKESCYRRVKEDRSQLLWSFRSPLNQSSAKQESI 60

Query: 61  KSAFEDIVSDELNKIKNQHSDASEVQTSLSGDDDILWEYDSHRTDDKAECEEILLEMQRI 120
           KSAFE IVSDEL KIKNQ+SD+SE  +SLSG+DD+LWEYD  +T +K ECEEILLEMQRI
Sbjct: 61  KSAFEGIVSDELKKIKNQYSDSSEFPSSLSGEDDVLWEYDGTQTANKGECEEILLEMQRI 120

Query: 121 FYEDISLELSQK--------EAERSVVLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPI 180
           FYEDI LELS+K        EAE S++LEDEEDEYLA AVN++MQLND K WKEQ WCP+
Sbjct: 121 FYEDIRLELSEKGMLHPLAKEAEESIILEDEEDEYLASAVNEYMQLNDRKSWKEQIWCPV 180

Query: 181 CKKGELQENLHLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETV 240
           CKKGELQEN HL+YCNLC   LNRGD+VNLSLL+DRLAEAHEEHLDRGCRSKP+FCIETV
Sbjct: 181 CKKGELQENEHLIYCNLCHLKLNRGDEVNLSLLRDRLAEAHEEHLDRGCRSKPKFCIETV 240

Query: 241 FDLTALYIQCQHCDTFEIVI 253
           FDLTALYIQCQ C TFEIVI
Sbjct: 241 FDLTALYIQCQLCATFEIVI 259
[Close]
BLAST of Spo02222.1 vs. NCBI nr
Match: gi|823126934|ref|XP_012491803.1| (PREDICTED: uncharacterized protein LOC105803909 isoform X1 [Gossypium raimondii])

HSP 1 Score: 275.4 bits (703), Expect = 9.900e-71
Identity = 149/260 (57.31%), Postives = 187/260 (71.92%), Query Frame = 1 

		  

Query: 1   MEVKKKQLKP--ERQPLKTL----NHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSS 60
           ME K +   P  +R  LKT     N+  WK KL+E+CY+RV+E+RTRLLW  R P  QS 
Sbjct: 1   MEPKMEDTCPIIQRPSLKTHPRFNNYSLWKHKLRENCYKRVREDRTRLLWKMRLPAAQSF 60

Query: 61  TQKEFLKSAFEDIVSDELNKIKNQH-SDASEVQTSLSGDDDILWEYDSHRTDDKAECEEI 120
             KEF+K+AF+DIVSDEL +IK+   SD  E   S+S   D LWEY   +   + ECEEI
Sbjct: 61  NHKEFIKTAFQDIVSDELKRIKDSPISDCLESSNSVSSAPDELWEYSGLQDAYQGECEEI 120

Query: 121 LLEMQRIFYEDISLELSQKEAERSV-VLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPI 180
           LLEMQRIFYED+  E ++KE +  +   EDE+DEYLA AV +HMQLND ++ ++Q WCPI
Sbjct: 121 LLEMQRIFYEDLRREPAEKEPKEGIESWEDEQDEYLARAVYEHMQLND-EQVQKQIWCPI 180

Query: 181 CKKGELQENLHLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETV 240
           CK+GELQ+N  L+YC LC+  LNR D+VNL +L+DRLAEAH +HL+RGCR KP+FC+ET 
Sbjct: 181 CKRGELQQNHQLIYCTLCKLQLNRDDEVNLEVLRDRLAEAHVDHLERGCRLKPKFCLETK 240

Query: 241 FDLTALYIQCQHCDTFEIVI 253
           F LTALYI CQ C TFEIVI
Sbjct: 241 FGLTALYILCQDCSTFEIVI 259
[Close]
BLAST of Spo02222.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R8N0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_094370 PE=4 SV=1)

HSP 1 Score: 506.5 bits (1303), Expect = 1.800e-140
Identity = 251/252 (99.60%), Postives = 252/252 (100.00%), Query Frame = 1 

		  

Query: 1   MEVKKKQLKPERQPLKTLNHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSSTQKEFL 60
           MEVKKKQLKPERQPLKTLNHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSSTQKEFL
Sbjct: 1   MEVKKKQLKPERQPLKTLNHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSSTQKEFL 60

Query: 61  KSAFEDIVSDELNKIKNQHSDASEVQTSLSGDDDILWEYDSHRTDDKAECEEILLEMQRI 120
           KSAFEDIVSDELNKIKNQHSDASEVQTSLSGDDDILWEYDSHRTDDKAECEEILLEMQRI
Sbjct: 61  KSAFEDIVSDELNKIKNQHSDASEVQTSLSGDDDILWEYDSHRTDDKAECEEILLEMQRI 120

Query: 121 FYEDISLELSQKEAERSVVLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPICKKGELQE 180
           FYEDISLELSQKEAERSVVLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPICKKGELQE
Sbjct: 121 FYEDISLELSQKEAERSVVLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPICKKGELQE 180

Query: 181 NLHLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETVFDLTALYI 240
           NL+LVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETVFDLTALYI
Sbjct: 181 NLYLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETVFDLTALYI 240

Query: 241 QCQHCDTFEIVI 253
           QCQHCDTFEIVI
Sbjct: 241 QCQHCDTFEIVI 252
[Close]
BLAST of Spo02222.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F361_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g119170 PE=4 SV=1)

HSP 1 Score: 408.3 bits (1048), Expect = 6.800e-111
Identity = 202/252 (80.16%), Postives = 227/252 (90.08%), Query Frame = 1 

		  

Query: 1   MEVKKKQLKPERQPLKTLNHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSSTQKEFL 60
           ME KKKQLKPERQPLKTL HISWKEKLKESCYRRVKE+R++LLW+ RSPL+QSS ++E +
Sbjct: 1   MEGKKKQLKPERQPLKTL-HISWKEKLKESCYRRVKEDRSQLLWSFRSPLNQSSAKQESI 60

Query: 61  KSAFEDIVSDELNKIKNQHSDASEVQTSLSGDDDILWEYDSHRTDDKAECEEILLEMQRI 120
           KSAFE IVSDEL KIKNQ+SD+SE  +SLSG+DD+LWEYD  +T +K ECEEILLEMQRI
Sbjct: 61  KSAFEGIVSDELKKIKNQYSDSSEFPSSLSGEDDVLWEYDGTQTANKGECEEILLEMQRI 120

Query: 121 FYEDISLELSQKEAERSVVLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPICKKGELQE 180
           FYEDI LELS+KEAE S++LEDEEDEYLA AVN++MQLND K WKEQ WCP+CKKGELQE
Sbjct: 121 FYEDIRLELSEKEAEESIILEDEEDEYLASAVNEYMQLNDRKSWKEQIWCPVCKKGELQE 180

Query: 181 NLHLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETVFDLTALYI 240
           N HL+YCNLC   LNRGD+VNLSLL+DRLAEAHEEHLDRGCRSKP+FCIETVFDLTALYI
Sbjct: 181 NEHLIYCNLCHLKLNRGDEVNLSLLRDRLAEAHEEHLDRGCRSKPKFCIETVFDLTALYI 240

Query: 241 QCQHCDTFEIVI 253
           QCQ C TFEIVI
Sbjct: 241 QCQLCATFEIVI 251
[Close]
BLAST of Spo02222.1 vs. UniProtKB/TrEMBL
Match: A0A0D2N3Z6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G225800 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 6.900e-71
Identity = 149/260 (57.31%), Postives = 187/260 (71.92%), Query Frame = 1 

		  

Query: 1   MEVKKKQLKP--ERQPLKTL----NHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSS 60
           ME K +   P  +R  LKT     N+  WK KL+E+CY+RV+E+RTRLLW  R P  QS 
Sbjct: 1   MEPKMEDTCPIIQRPSLKTHPRFNNYSLWKHKLRENCYKRVREDRTRLLWKMRLPAAQSF 60

Query: 61  TQKEFLKSAFEDIVSDELNKIKNQH-SDASEVQTSLSGDDDILWEYDSHRTDDKAECEEI 120
             KEF+K+AF+DIVSDEL +IK+   SD  E   S+S   D LWEY   +   + ECEEI
Sbjct: 61  NHKEFIKTAFQDIVSDELKRIKDSPISDCLESSNSVSSAPDELWEYSGLQDAYQGECEEI 120

Query: 121 LLEMQRIFYEDISLELSQKEAERSV-VLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPI 180
           LLEMQRIFYED+  E ++KE +  +   EDE+DEYLA AV +HMQLND ++ ++Q WCPI
Sbjct: 121 LLEMQRIFYEDLRREPAEKEPKEGIESWEDEQDEYLARAVYEHMQLND-EQVQKQIWCPI 180

Query: 181 CKKGELQENLHLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETV 240
           CK+GELQ+N  L+YC LC+  LNR D+VNL +L+DRLAEAH +HL+RGCR KP+FC+ET 
Sbjct: 181 CKRGELQQNHQLIYCTLCKLQLNRDDEVNLEVLRDRLAEAHVDHLERGCRLKPKFCLETK 240

Query: 241 FDLTALYIQCQHCDTFEIVI 253
           F LTALYI CQ C TFEIVI
Sbjct: 241 FGLTALYILCQDCSTFEIVI 259
[Close]
BLAST of Spo02222.1 vs. UniProtKB/TrEMBL
Match: A0A0D2PJS8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G225800 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.200e-70
Identity = 149/260 (57.31%), Postives = 185/260 (71.15%), Query Frame = 1 

		  

Query: 1   MEVKKKQLKP--ERQPLKTL----NHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSS 60
           ME K +   P  +R  LKT     N+  WK KL+E+CY+RV+E+RTRLLW  R P  QS 
Sbjct: 1   MEPKMEDTCPIIQRPSLKTHPRFNNYSLWKHKLRENCYKRVREDRTRLLWKMRLPAAQSF 60

Query: 61  TQKEFLKSAFEDIVSDELNKIKNQH-SDASEVQTSLSGDDDILWEYDSHRTDDKAECEEI 120
             KEF+K+AF+DIVSDEL +IK+   SD  E   S+S   D LWEY   +   + ECEEI
Sbjct: 61  NHKEFIKTAFQDIVSDELKRIKDSPISDCLESSNSVSSAPDELWEYSGLQDAYQGECEEI 120

Query: 121 LLEMQRIFYEDISLELSQKEAERSV-VLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPI 180
           LLEMQRIFYED+  E ++KE +  +   EDE+DEYLA AV +HMQLND    ++Q WCPI
Sbjct: 121 LLEMQRIFYEDLRREPAEKEPKEGIESWEDEQDEYLARAVYEHMQLNDE---QKQIWCPI 180

Query: 181 CKKGELQENLHLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETV 240
           CK+GELQ+N  L+YC LC+  LNR D+VNL +L+DRLAEAH +HL+RGCR KP+FC+ET 
Sbjct: 181 CKRGELQQNHQLIYCTLCKLQLNRDDEVNLEVLRDRLAEAHVDHLERGCRLKPKFCLETK 240

Query: 241 FDLTALYIQCQHCDTFEIVI 253
           F LTALYI CQ C TFEIVI
Sbjct: 241 FGLTALYILCQDCSTFEIVI 257
[Close]
BLAST of Spo02222.1 vs. UniProtKB/TrEMBL
Match: A0A0B0NLC6_GOSAR (RPA-interacting B OS=Gossypium arboreum GN=F383_17311 PE=4 SV=1)

HSP 1 Score: 274.2 bits (700), Expect = 1.500e-70
Identity = 150/260 (57.69%), Postives = 185/260 (71.15%), Query Frame = 1 

		  

Query: 1   MEVKKKQLKP--ERQPLKTL----NHISWKEKLKESCYRRVKENRTRLLWNSRSPLHQSS 60
           ME K +   P  +R  LKT     N+  WK KL+E+CY+RV+E+RTRLLW  R P  QS 
Sbjct: 1   MERKMEDTCPIIQRPSLKTHPRFNNYSLWKHKLRENCYKRVREDRTRLLWKMRLPAAQSL 60

Query: 61  TQKEFLKSAFEDIVSDELNKIKNQH-SDASEVQTSLSGDDDILWEYDSHRTDDKAECEEI 120
             KEF+K+AF+DIVSDEL KIK    SD  E   S+S   D LWEY   +   + ECEEI
Sbjct: 61  NHKEFIKTAFQDIVSDELKKIKGSPISDCLESSNSVSSAPDELWEYSGLQDAYQGECEEI 120

Query: 121 LLEMQRIFYEDISLELSQKEAERSV-VLEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPI 180
           LLEMQRIFYED+  E + KE +  +   EDE+DEYLA AV +HMQLND ++ ++Q WCPI
Sbjct: 121 LLEMQRIFYEDLRREPAGKEPKEGIESWEDEQDEYLARAVYEHMQLND-EQVQKQIWCPI 180

Query: 181 CKKGELQENLHLVYCNLCQFTLNRGDQVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETV 240
           CK+GELQ+N  L+YC LC+  LNR D+VNL +L+DRLAEAH +HL+RGCR KP+FC+ET 
Sbjct: 181 CKRGELQQNHQLIYCTLCKLQLNRDDEVNLDVLRDRLAEAHVDHLERGCRLKPKFCLETK 240

Query: 241 FDLTALYIQCQHCDTFEIVI 253
           F LTALYI CQ C TFEIVI
Sbjct: 241 FGLTALYILCQDCSTFEIVI 259
[Close]
BLAST of Spo02222.1 vs. TAIR (Arabidopsis)
Match: AT4G12760.1 (unknown protein)

HSP 1 Score: 228.8 bits (582), Expect = 3.700e-60
Identity = 123/234 (52.56%), Postives = 165/234 (70.51%), Query Frame = 1 

		  

Query: 24  KEKLKESCYRRVKENRTRLLWNSRSPLHQSSTQKEFLKSAFEDIVSDELNKIKNQHSDAS 83
           K+K +E+C+RRV+E+RTRLLW  R    QSS QKE +  AF+DIVSDEL KI++   + S
Sbjct: 29  KQKFRENCFRRVREDRTRLLWKLRISDCQSSDQKEIINCAFQDIVSDELKKIEDSSRNLS 88

Query: 84  EVQTSLSGDDDILWEYDSH-RTDDKAECEEILLEMQRIFYEDISLELSQKEAERSVV--- 143
             +T     DDILWEY+   +   + + EEILLEMQ+IFY+D+   LS+     S V   
Sbjct: 89  GNKTLTEDCDDILWEYEEGLKGVYEGDSEEILLEMQQIFYKDL---LSETNVNGSFVQVE 148

Query: 144 -LEDEEDEYLAFAVNQHMQLNDGKEWKEQTWCPICKKGELQENLHLVYCNLCQFTLNRGD 203
             EDEED+YLA  V+Q+M LN  +E + Q WCPICKKGEL EN   + CN+C   LN+G+
Sbjct: 149 TWEDEEDDYLAALVSQNMCLNSEQE-ESQIWCPICKKGELMENHRHIDCNMCDMQLNKGE 208

Query: 204 QVNLSLLKDRLAEAHEEHLDRGCRSKPEFCIETVFDLTALYIQCQHCDTFEIVI 253
           +VNL++L++RLAEAH EHL RGCR KPEF +++V++L ALYI C+ C TFE+V+
Sbjct: 209 EVNLNILQERLAEAHGEHLQRGCRLKPEFSVQSVYNLKALYITCEACKTFEVVV 258
The following BLAST results are available for this feature:
BLAST of Spo02222.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902208116|gb|KNA15851.1|2.6e-14099.6hypothetical protein SOVF_0943... [more]
gi|731336032|ref|XP_010679039.1|9.8e-11180.1PREDICTED: uncharacterized pro... [more]
gi|731336030|ref|XP_010679038.1|4.1e-10979.2PREDICTED: uncharacterized pro... [more]
gi|731336028|ref|XP_010679037.1|1.6e-10877.6PREDICTED: uncharacterized pro... [more]
gi|823126934|ref|XP_012491803.1|9.9e-7157.3PREDICTED: uncharacterized pro... [more]
back to top
BLAST of Spo02222.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9R8N0_SPIOL1.8e-14099.6Uncharacterized protein OS=Spi... [more]
A0A0J8F361_BETVU6.8e-11180.1Uncharacterized protein OS=Bet... [more]
A0A0D2N3Z6_GOSRA6.9e-7157.3Uncharacterized protein OS=Gos... [more]
A0A0D2PJS8_GOSRA1.2e-7057.3Uncharacterized protein OS=Gos... [more]
A0A0B0NLC6_GOSAR1.5e-7057.6RPA-interacting B OS=Gossypium... [more]
back to top
BLAST of Spo02222.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
BLAST of Spo02222.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1
Match NameE-valueIdentityDescription
AT4G12760.13.7e-6052.5unknown protein[more]
back to top
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028155RPA-interacting protein, central domainPFAMPF14767RPA_interact_Mcoord: 62..152
score: 3.7
IPR028156RPA-interacting proteinPANTHERPTHR31742FAMILY NOT NAMEDcoord: 10..252
score: 7.7
IPR028158RPA-interacting protein, N-terminal domainPFAMPF14766RPA_interact_Ncoord: 11..48
score: 1.3
IPR028159RPA-interacting protein, C-terminal domainPFAMPF14768RPA_interact_Ccoord: 169..250
score: 3.0
NoneNo IPR availablePRODOMPD472859coord: 23..252
score: 2.
NoneNo IPR availablePANTHERPTHR31742:SF1RPA-INTERACTING PROTEINcoord: 10..252
score: 7.7

RNA-Seq Expression