Spo27249 (gene) | SpinachBase

Overview


Name	Spo27249
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	Defensin-like protein 5
Location	chr5 : 8768298 .. 8769139 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGATGTCAATGAGGCCATTTGCTACTTTTTTCCTTGTGTTCTTACTCGTCTTGACAACAGGTTCCTAAGTCTATCCTTACCGTCTTTTAAATTAATATTTTTATTTTACGCATCCATTTGAGATAAAGAATTTCAAGAATAAAGAATTAGTTTCTTTTTGCCTTTGCAAATTCTTTTTCTTTAATATTATTTTGAAAGAACAATAATGTCAAAAAGCAACAATAATTCAAAAAAAGATGGAGGAGTTCTTTTGTTTGTTAGCTACGTGTCTAAGTATAGGGTCAGTGTCGGACTCGTGCTTCTCTTTCATAAATGAGGTATATGCACATCCCGTCCCACGTGTCACGTTGGGGTGGATCGTCCCGTGCTAGCTGACTGGCTTGACTCTCTTACTAATTTTAAGATTTTTTTTGTTATTGTTTAAAAAATAAGCGTGTCGGCTCATCGTACTTGTGTCGGGCTCTTGCCAAATTTCAAAAATGATGTCCATGGAGTGGCGTGGCCATTACAATAGGCATGTGTCATGCCAGGCCAGGCAAATTTACATTAATTTTTCTACCATATCATTTCTGATGCAAATTCATCTAAACTAATACTCAGTACATATACGCTATTTGTTTCCAATTTTCATGAATCTAACACATTTTTTTGTATATGGGGAGCAGAGGTAAGCACAAAAGTAGCAGAAGCAAGGATATGTGCTAGTCCAAGTCACACGTTTAGAGGAATATGTTTTAGCAGCAGGAATTGTGAAACTAATTGCAATTCTGAGAGATTTTCTGGAGGAAGTTGTCAAGGTTTTCGTAGAAGATGCATGTGCACCAAGCCTTGCGCTTAA

mRNA sequence

ATGAAGATGTCAATGAGGCCATTTGCTACTTTTTTCCTTGTGTTCTTACTCGTCTTGACAACAGAGGTAAGCACAAAAGTAGCAGAAGCAAGGATATGTGCTAGTCCAAGTCACACGTTTAGAGGAATATGTTTTAGCAGCAGGAATTGTGAAACTAATTGCAATTCTGAGAGATTTTCTGGAGGAAGTTGTCAAGGTTTTCGTAGAAGATGCATGTGCACCAAGCCTTGCGCTTAA

Coding sequence (CDS)

ATGAAGATGTCAATGAGGCCATTTGCTACTTTTTTCCTTGTGTTCTTACTCGTCTTGACAACAGAGGTAAGCACAAAAGTAGCAGAAGCAAGGATATGTGCTAGTCCAAGTCACACGTTTAGAGGAATATGTTTTAGCAGCAGGAATTGTGAAACTAATTGCAATTCTGAGAGATTTTCTGGAGGAAGTTGTCAAGGTTTTCGTAGAAGATGCATGTGCACCAAGCCTTGCGCTTAA

Protein sequence

MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFSGGSCQGFRRRCMCTKPCA

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo27249.1	Spo27249.1	mRNA

Homology

[Close]

BLAST of Spo27249.1 vs. NCBI nr
Match: gi|870858987|gb|KMT10451.1| (hypothetical protein BVRB_5g115780 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 124.8 bits (312), Expect = 6.700e-26
Identity = 57/78 (73.08%), Postives = 67/78 (85.90%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK SM+P   FFLVFL+VLTT+V T+VAEAR C +PSH FRGIC SSRNCE+ C++ERF 
Sbjct: 1  MKQSMKPVVAFFLVFLIVLTTDVGTRVAEARTCMTPSHQFRGICVSSRNCESACHTERFP 60

Query: 61 GGSCQGFRRRCMCTKPCA 79
          GG+CQGFRRRCMCT+PCA
Sbjct: 61 GGTCQGFRRRCMCTRPCA 78

[Close]

BLAST of Spo27249.1 vs. NCBI nr
Match: gi|902203910|gb|KNA14731.1| (hypothetical protein SOVF_104940 [Spinacia oleracea])

HSP 1 Score: 121.3 bits (303), Expect = 7.400e-25
Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK SMRPFA  FLV  LVL TE+  +V EAR+C+SPSH F+GIC SSRNCE  CNSERFS
Sbjct: 1  MKQSMRPFAALFLVLFLVLATEIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 60

Query: 61 GGSCQGFRRRCMCTKPC 78
          GG C+GFRRRCMCT PC
Sbjct: 61 GGECKGFRRRCMCTGPC 77

[Close]

BLAST of Spo27249.1 vs. NCBI nr
Match: gi|902113320|gb|KNA03822.1| (hypothetical protein SOVF_205360 [Spinacia oleracea])

HSP 1 Score: 113.6 bits (283), Expect = 1.500e-22
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 1

		  
Query: 12 FLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFSGGSCQGFRRRC 71
          FLV LLVL  E++ +VAEAR C +PSHTFRG+C SSRNCE+NCNSERFS GSCQGFRRRC
Sbjct: 6  FLVLLLVLAAEIAPEVAEARTCTTPSHTFRGVCVSSRNCESNCNSERFSSGSCQGFRRRC 65

Query: 72 MCTKPC 78
          MC+KPC
Sbjct: 66 MCSKPC 71

[Close]

BLAST of Spo27249.1 vs. NCBI nr
Match: gi|870858984|gb|KMT10448.1| (hypothetical protein BVRB_5g115750 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 108.6 bits (270), Expect = 5.000e-21
Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK  MRPFA   L  LLVL TE+  +VAEAR C +PSH FRGIC S RNCE+ CNSE F 
Sbjct: 1  MKQPMRPFAAILLALLLVLATEIGPRVAEARTCVTPSHRFRGICVSKRNCESACNSEGFP 60

Query: 61 GGSCQGFRRRCMCTKPCA 79
           G+C+GFRRRC+C +PCA
Sbjct: 61 DGNCKGFRRRCICNRPCA 78

[Close]

BLAST of Spo27249.1 vs. NCBI nr
Match: gi|870858985|gb|KMT10449.1| (hypothetical protein BVRB_5g115760 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 107.8 bits (268), Expect = 8.400e-21
Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK  MRPFA   +VFLLVL TE+  +VAEAR C +PSH+F+GIC   RNCE+ CNSE F+
Sbjct: 1  MKQPMRPFAAILVVFLLVLATEIGPRVAEARTCDAPSHSFKGICTRKRNCESVCNSEGFA 60

Query: 61 GGSCQGFRRRCMCTKPCA 79
           G C+GFRRRC+C +PCA
Sbjct: 61 DGDCKGFRRRCICNRPCA 78

[Close]

BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
Match: A0A0J8F3X2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115780 PE=3 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.700e-26
Identity = 57/78 (73.08%), Postives = 67/78 (85.90%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK SM+P   FFLVFL+VLTT+V T+VAEAR C +PSH FRGIC SSRNCE+ C++ERF 
Sbjct: 1  MKQSMKPVVAFFLVFLIVLTTDVGTRVAEARTCMTPSHQFRGICVSSRNCESACHTERFP 60

Query: 61 GGSCQGFRRRCMCTKPCA 79
          GG+CQGFRRRCMCT+PCA
Sbjct: 61 GGTCQGFRRRCMCTRPCA 78

[Close]

BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R5F0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_104940 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 5.100e-25
Identity = 56/77 (72.73%), Postives = 62/77 (80.52%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK SMRPFA  FLV  LVL TE+  +V EAR+C+SPSH F+GIC SSRNCE  CNSERFS
Sbjct: 1  MKQSMRPFAALFLVLFLVLATEIGPRVVEARMCSSPSHRFKGICTSSRNCENTCNSERFS 60

Query: 61 GGSCQGFRRRCMCTKPC 78
          GG C+GFRRRCMCT PC
Sbjct: 61 GGECKGFRRRCMCTGPC 77

[Close]

BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
Match: A0A0K9Q961_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_205360 PE=3 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 1.100e-22
Identity = 51/66 (77.27%), Postives = 58/66 (87.88%), Query Frame = 1

		  
Query: 12 FLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFSGGSCQGFRRRC 71
          FLV LLVL  E++ +VAEAR C +PSHTFRG+C SSRNCE+NCNSERFS GSCQGFRRRC
Sbjct: 6  FLVLLLVLAAEIAPEVAEARTCTTPSHTFRGVCVSSRNCESNCNSERFSSGSCQGFRRRC 65

Query: 72 MCTKPC 78
          MC+KPC
Sbjct: 66 MCSKPC 71

[Close]

BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CEL9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115750 PE=3 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 3.500e-21
Identity = 50/78 (64.10%), Postives = 58/78 (74.36%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK  MRPFA   L  LLVL TE+  +VAEAR C +PSH FRGIC S RNCE+ CNSE F 
Sbjct: 1  MKQPMRPFAAILLALLLVLATEIGPRVAEARTCVTPSHRFRGICVSKRNCESACNSEGFP 60

Query: 61 GGSCQGFRRRCMCTKPCA 79
           G+C+GFRRRC+C +PCA
Sbjct: 61 DGNCKGFRRRCICNRPCA 78

[Close]

BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CE40_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g115760 PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 5.900e-21
Identity = 49/78 (62.82%), Postives = 60/78 (76.92%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK  MRPFA   +VFLLVL TE+  +VAEAR C +PSH+F+GIC   RNCE+ CNSE F+
Sbjct: 1  MKQPMRPFAAILVVFLLVLATEIGPRVAEARTCDAPSHSFKGICTRKRNCESVCNSEGFA 60

Query: 61 GGSCQGFRRRCMCTKPCA 79
           G C+GFRRRC+C +PCA
Sbjct: 61 DGDCKGFRRRCICNRPCA 78

[Close]

BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
Match: DF322_SOLTU (Defensin-like protein P322 OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 5.700e-17
Identity = 43/74 (58.11%), Postives = 54/74 (72.97%), Query Frame = 1

		  
Query: 5  MRPFATFFLVFLLVLTTEVST-KVAEARICASPSHTFRGICFSSRNCETNCNSERFSGGS 64
          MR FATFFL+ +LV+ T++   ++AEAR C S SH F+G C    NC + C +ERFSGG+
Sbjct: 1  MRFFATFFLLAMLVVATKMGPMRIAEARHCESLSHRFKGPCTRDSNCASVCETERFSGGN 60

Query: 65 CQGFRRRCMCTKPC 78
          C GFRRRC CTKPC
Sbjct: 61 CHGFRRRCFCTKPC 74

[Close]

BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
Match: DEF_NELNU (Defensin-like protein OS=Nelumbo nucifera PE=3 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 4.800e-16
Identity = 41/77 (53.25%), Postives = 49/77 (63.64%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          M+  MR F++  LV LLV  TE+  KVAEAR C S SH F+G C S  NC + C +E F 
Sbjct: 1  MERGMRLFSSLVLVLLLVTATEMGPKVAEARTCESQSHRFKGACLSDTNCASVCQTEGFP 60

Query: 61 GGSCQGFRRRCMCTKPC 78
           G C+G RRRC C KPC
Sbjct: 61 AGDCKGARRRCFCVKPC 77

[Close]

BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
Match: DFSD2_HELAN (Defensin SD2 OS=Helianthus annuus GN=SD2 PE=2 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 2.400e-15
Identity = 42/78 (53.85%), Postives = 49/78 (62.82%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTK-VAEARICASPSHTFRGICFSSRNCETNCNSERF 60
          MK SM+ FA   LV + +L  E+    V EAR C S SH F+G C S  NC   C+SERF
Sbjct: 1  MKSSMKMFAALLLVVMCLLANEMGGPLVVEARTCESQSHKFKGTCLSDTNCANVCHSERF 60

Query: 61 SGGSCQGFRRRCMCTKPC 78
          SGG C+GFRRRC CT  C
Sbjct: 61 SGGKCRGFRRRCFCTTHC 78

[Close]

BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
Match: DEF2_CAPAN (Defensin J1-2 OS=Capsicum annuum PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 2.600e-14
Identity = 38/69 (55.07%), Postives = 49/69 (71.01%), Query Frame = 1

		  
Query: 9  ATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFSGGSCQGFR 68
          AT FL+ +LV  T +   VAEAR C S SH F+G+CFS  NC + C++E F+GG C+GFR
Sbjct: 9  ATIFLMMMLVFATGM---VAEARTCESQSHRFKGLCFSKSNCGSVCHTEGFNGGHCRGFR 68

Query: 69 RRCMCTKPC 78
          RRC CT+ C
Sbjct: 69 RRCFCTRHC 74

[Close]

BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
Match: DEF_PETIN (Defensin-like protein OS=Petunia integrifolia PE=2 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.400e-14
Identity = 40/78 (51.28%), Postives = 50/78 (64.10%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKV-AEARICASPSHTFRGICFSSRNCETNCNSERF 60
          M  S+R FATFFL+ +L L+TE+     AEAR C S SH F G C    NC + C +E F
Sbjct: 1  MGRSIRLFATFFLIAMLFLSTEMGPMTSAEARTCESQSHRFHGTCVRESNCASVCQTEGF 60

Query: 61 SGGSCQGFRRRCMCTKPC 78
           GG+C+ FRRRC CT+ C
Sbjct: 61 IGGNCRAFRRRCFCTRNC 78

[Close]

BLAST of Spo27249.1 vs. TAIR (Arabidopsis)
Match: AT2G02100.1 (low-molecular-weight cysteine-rich 69)

HSP 1 Score: 78.2 bits (191), Expect = 2.500e-15
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK+SMR  +   ++F++ + T +     EAR C S SH F+G C S+ NC   C++E F 
Sbjct: 1  MKLSMRLISAVLIMFMIFVATGMGPVTVEARTCESQSHRFKGTCVSASNCANVCHNEGFV 60

Query: 61 GGSCQGFRRRCMCTKPC 78
          GG+C+GFRRRC CT+ C
Sbjct: 61 GGNCRGFRRRCFCTRHC 77

[Close]

BLAST of Spo27249.1 vs. TAIR (Arabidopsis)
Match: AT2G02130.1 (low-molecular-weight cysteine-rich 68)

HSP 1 Score: 76.3 bits (186), Expect = 9.600e-15
Identity = 35/77 (45.45%), Postives = 49/77 (63.64%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK+S+R  +   L+F++ + T +     EAR C S SH F+G C S+ NC   C++E F 
Sbjct: 1  MKLSVRFISAALLLFMVFIATGMGPVTVEARTCESKSHRFKGPCVSTHNCANVCHNEGFG 60

Query: 61 GGSCQGFRRRCMCTKPC 78
          GG C+GFRRRC CT+ C
Sbjct: 61 GGKCRGFRRRCYCTRHC 77

[Close]

BLAST of Spo27249.1 vs. TAIR (Arabidopsis)
Match: AT2G02120.1 (Scorpion toxin-like knottin superfamily protein)

HSP 1 Score: 73.9 bits (180), Expect = 4.800e-14
Identity = 35/77 (45.45%), Postives = 46/77 (59.74%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK SMR  +    + ++ + T +     EAR CAS S  F+G C S  NCE  C++E F 
Sbjct: 1  MKFSMRLISAVLFLVMIFVATGMGPVTVEARTCASQSQRFKGKCVSDTNCENVCHNEGFP 60

Query: 61 GGSCQGFRRRCMCTKPC 78
          GG C+GFRRRC CT+ C
Sbjct: 61 GGDCRGFRRRCFCTRNC 77

[Close]

BLAST of Spo27249.1 vs. TAIR (Arabidopsis)
Match: AT1G61070.1 (low-molecular-weight cysteine-rich 66)

HSP 1 Score: 72.4 bits (176), Expect = 1.400e-13
Identity = 36/77 (46.75%), Postives = 49/77 (63.64%), Query Frame = 1

		  
Query: 1  MKMSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFS 60
          MK+S R  +   L+F+ +L T +     EAR C + S+ F G C SS NC   C++E FS
Sbjct: 1  MKVSPRLNSALLLLFM-ILATVMGLVTVEARTCETSSNLFNGPCLSSSNCANVCHNEGFS 60

Query: 61 GGSCQGFRRRCMCTKPC 78
           G C+GFRRRC+CT+PC
Sbjct: 61 DGDCRGFRRRCLCTRPC 76

[Close]

BLAST of Spo27249.1 vs. TAIR (Arabidopsis)
Match: AT5G63660.1 (Scorpion toxin-like knottin superfamily protein)

HSP 1 Score: 65.1 bits (157), Expect = 2.200e-11
Identity = 34/75 (45.33%), Postives = 44/75 (58.67%), Query Frame = 1

		  
Query: 3  MSMRPFATFFLVFLLVLTTEVSTKVAEARICASPSHTFRGICFSSRNCETNCNSERFSGG 62
          M  + FA FFL+ +L  + E+     E R C S SH F+ +C S+ NC   C +E FSGG
Sbjct: 1  MENKFFAAFFLLLVLFSSQEIIG--GEGRTCQSKSHHFKYMCTSNHNCAIVCRNEGFSGG 60

Query: 63 SCQGFRRRCMCTKPC 78
           C GF RRC CT+ C
Sbjct: 61 RCHGFHRRCYCTRLC 73

The following BLAST results are available for this feature:

BLAST of Spo27249.1 vs. NCBI nr
BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
BLAST of Spo27249.1 vs. TAIR (Arabidopsis)

BLAST of Spo27249.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
gi\|870858987\|gb\|KMT10451.1\|	6.7e-26	73.0	hypothetical protein BVRB_5g11...	[more]
gi\|902203910\|gb\|KNA14731.1\|	7.4e-25	72.7	hypothetical protein SOVF_1049...	[more]
gi\|902113320\|gb\|KNA03822.1\|	1.5e-22	77.2	hypothetical protein SOVF_2053...	[more]
gi\|870858984\|gb\|KMT10448.1\|	5.0e-21	64.1	hypothetical protein BVRB_5g11...	[more]
gi\|870858985\|gb\|KMT10449.1\|	8.4e-21	62.8	hypothetical protein BVRB_5g11...	[more]

BLAST of Spo27249.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
A0A0J8F3X2_BETVU	4.7e-26	73.0	Uncharacterized protein OS=Bet...	[more]
A0A0K9R5F0_SPIOL	5.1e-25	72.7	Uncharacterized protein OS=Spi...	[more]
A0A0K9Q961_SPIOL	1.1e-22	77.2	Uncharacterized protein OS=Spi...	[more]
A0A0J8CEL9_BETVU	3.5e-21	64.1	Uncharacterized protein OS=Bet...	[more]
A0A0J8CE40_BETVU	5.9e-21	62.8	Uncharacterized protein OS=Bet...	[more]

BLAST of Spo27249.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
DF322_SOLTU	5.7e-17	58.1	Defensin-like protein P322 OS=...	[more]
DEF_NELNU	4.8e-16	53.2	Defensin-like protein OS=Nelum...	[more]
DFSD2_HELAN	2.4e-15	53.8	Defensin SD2 OS=Helianthus ann...	[more]
DEF2_CAPAN	2.6e-14	55.0	Defensin J1-2 OS=Capsicum annu...	[more]
DEF_PETIN	3.4e-14	51.2	Defensin-like protein OS=Petun...	[more]

BLAST of Spo27249.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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x 1


Match Name	E-value	Identity	Description
AT2G02100.1	2.5e-15	45.4	low-molecular-weight cysteine-...	[more]
AT2G02130.1	9.6e-15	45.4	low-molecular-weight cysteine-...	[more]
AT2G02120.1	4.8e-14	45.4	Scorpion toxin-like knottin su...	[more]
AT1G61070.1	1.4e-13	46.7	low-molecular-weight cysteine-...	[more]
AT5G63660.1	2.2e-11	45.3	Scorpion toxin-like knottin su...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003614	Knottin, scorpion toxin-like	GENE3D	3.30.30.10		coord: 31..77 score: 2.8
IPR003614	Knottin, scorpion toxin-like	SMART	SM00505	gth_4	coord: 32..77 score: 9.9
IPR003614	Knottin, scorpion toxin-like	unknown	SSF57095	Scorpion toxin-like	coord: 31..77 score: 3.23
IPR008176	Defensin, plant	PRINTS	PR00288	PUROTHIONIN	coord: 32..47 score: 5.0E-8coord: 62..76 score: 5.
IPR008176	Defensin, plant	PROSITE	PS00940	GAMMA_THIONIN	coord: 31..54 scor
None	No IPR available	PANTHER	PTHR33147	FAMILY NOT NAMED	coord: 1..77 score: 6.1
None	No IPR available	PFAM	PF00304	Gamma-thionin	coord: 31..77 score: 4.7

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006863	purine nucleobase transport
biological_process	GO:0030163	protein catabolic process
biological_process	GO:0071805	potassium ion transmembrane transport
biological_process	GO:0006457	protein folding
biological_process	GO:0016126	sterol biosynthetic process
biological_process	GO:0019745	pentacyclic triterpenoid biosynthetic process
biological_process	GO:0016311	dephosphorylation
biological_process	GO:0015713	phosphoglycerate transmembrane transport
biological_process	GO:0030154	cell differentiation
biological_process	GO:0006811	ion transport
biological_process	GO:0009718	anthocyanin-containing compound biosynthetic process
biological_process	GO:0008152	metabolic process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0042548	regulation of photosynthesis, light reaction
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0006508	proteolysis
biological_process	GO:0009965	leaf morphogenesis
biological_process	GO:0019285	glycine betaine biosynthetic process from choline
biological_process	GO:0006013	mannose metabolic process
biological_process	GO:0019509	L-methionine salvage from methylthioadenosine
biological_process	GO:0019252	starch biosynthetic process
biological_process	GO:0043085	positive regulation of catalytic activity
biological_process	GO:0016310	phosphorylation
biological_process	GO:0000023	maltose metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
biological_process	GO:0006096	glycolytic process
biological_process	GO:0006661	phosphatidylinositol biosynthetic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006012	galactose metabolic process
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0006002	fructose 6-phosphate metabolic process
biological_process	GO:0046835	carbohydrate phosphorylation
biological_process	GO:0006656	phosphatidylcholine biosynthetic process
biological_process	GO:0032259	methylation
biological_process	GO:0015996	chlorophyll catabolic process
biological_process	GO:0089722	phosphoenolpyruvate transmembrane transport
biological_process	GO:0019439	aromatic compound catabolic process
biological_process	GO:0006352	DNA-templated transcription, initiation
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006810	transport
biological_process	GO:0006486	protein glycosylation
biological_process	GO:0006744	ubiquinone biosynthetic process
biological_process	GO:0009805	coumarin biosynthetic process
biological_process	GO:0009611	response to wounding
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0006598	polyamine catabolic process
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0009409	response to cold
biological_process	GO:0010264	myo-inositol hexakisphosphate biosynthetic process
biological_process	GO:0010207	photosystem II assembly
biological_process	GO:0009637	response to blue light
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005945	6-phosphofructokinase complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0005840	ribosome
cellular_component	GO:0005739	mitochondrion
cellular_component	GO:0005622	intracellular
cellular_component	GO:0009570	chloroplast stroma
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0010287	plastoglobule
cellular_component	GO:0005777	peroxisome
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003872	6-phosphofructokinase activity
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0000234	phosphoethanolamine N-methyltransferase activity
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0019133	choline monooxygenase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0016987	sigma factor activity
molecular_function	GO:0005215	transporter activity
molecular_function	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016708	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0015121	phosphoenolpyruvate:phosphate antiporter activity
molecular_function	GO:0015120	phosphoglycerate transmembrane transporter activity
molecular_function	GO:0008131	primary amine oxidase activity
molecular_function	GO:0016791	phosphatase activity
molecular_function	GO:0046592	polyamine oxidase activity
molecular_function	GO:0008289	lipid binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0052663	antheraxanthin epoxidase activity
molecular_function	GO:0052662	zeaxanthin epoxidase activity
molecular_function	GO:0009540	zeaxanthin epoxidase [overall] activity
molecular_function	GO:0005509	calcium ion binding
molecular_function	GO:0005267	potassium channel activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008233	peptidase activity
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0010309	acireductone dioxygenase [iron(II)-requiring] activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo23035	0.75	Barchart \| Table
Spo13645	0.74	Barchart \| Table
Spo25493	0.73	Barchart \| Table
Spo30001	0.72	Barchart \| Table
Spo26224	0.72	Barchart \| Table
Spo14473	0.71	Barchart \| Table
Spo01093	0.71	Barchart \| Table
Spo21035	0.70	Barchart \| Table
Spo25953	0.70	Barchart \| Table
Spo11303	0.70	Barchart \| Table
Spo21484	0.69	Barchart \| Table
Spo26520	0.69	Barchart \| Table
Spo21274	0.69	Barchart \| Table
Spo18231	0.68	Barchart \| Table
Spo11549	0.68	Barchart \| Table
Spo17345	0.68	Barchart \| Table
Spo19442	0.68	Barchart \| Table
Spo27250	0.67	Barchart \| Table
Spo00314	0.67	Barchart \| Table
Spo19812	0.67	Barchart \| Table
Spo14558	0.67	Barchart \| Table
Spo10957	0.67	Barchart \| Table
Spo22921	0.67	Barchart \| Table
Spo09378	0.67	Barchart \| Table
Spo25689	0.67	Barchart \| Table
Spo15990	0.66	Barchart \| Table
Spo20891	0.66	Barchart \| Table
Spo01230	0.66	Barchart \| Table
Spo08168	0.66	Barchart \| Table
Spo14923	0.66	Barchart \| Table
Spo21884	0.65	Barchart \| Table
Spo04256	0.65	Barchart \| Table
Spo23993	0.65	Barchart \| Table
Spo01135	0.65	Barchart \| Table
Spo07109	0.65	Barchart \| Table
Spo12252	0.65	Barchart \| Table