Spo04012 (gene)

Overview
NameSpo04012
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionDbj|BAA90342.1
Locationchr6 : 6690988 .. 6694446 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATCTAGCTCCTCCCCTCTTCCGAATTTCGAATCATATTTACTGTGTACACGATCAGACTATTCACACCGTGGCACCGTCCCCCACTCCTCTCTCTCATATCGCCACCGTGCTCCGCCATGTGCCACCAAAATTAACCACCATTTTAAACTTCCATTAAAATCTTAGAGAAAATTAGGGTTTCGCAAGAAAAATGGCCAAGAATTCCTCAAATCCGAAAGTTGTGACTTCAATCACATGTCCACACTGTGCTGGTCCTCTCTCAAAAGAAATGGTAAGTAAACGGAAAACAAAAATTCAACCATTTTGGCCTCAATTTCTCAGTAATCCTCGAATAAAATCGAAATCGTTGAATATTTTTTTTTGATTTATTGTTGTTGTCAATAATGTAATCGCAGGAAACTAGTCGTTGGACTGTGGCGCCGCTCGTCAGAGACAGCTTTTCAATGGTATATAGAATTCTGATTTTAAAGTTAATATTTGTTAGTTTTATGATTATAATTCAGCTTAAGTTAAAATTTCTAATTCCTGCATAAATGTGTGAATGATTGCAGATTGGTTCTGCTGTTGGTGGCACCACAAGTGCATTCTATGCGTTCAATTATGGTAAATACCTTAGTGTTTAGTTTAATTTCCAGTTAATGACGATATTAGAATTTAGAAATGTCAGGAAAGCTCCAGCTTTTTTGTTTGAGCATAATTGGAGTTTCAATAAAAGAATTTCTGCTGCGAGATGCTTAGAGTGTCCGTCTTTTGTGCAGTAATGCCGACTGTTTATAAATGGGTTAAAGGGCCAATGTGGCTGCATTTTCTAATCGGAGTAAGTCTACTTGACTCTATAAGAATGATAACTAGATGCTGCATTCTGTTTTATCTGGCCGCTTTTCGAGAGAGTTAGGCTATGTTTGGTTCAACTAAATTTGACTGAAATTAACTTATCTGAATTTAGTTTTGCTGAAAAAAACTTACTTGTGTGAAATTGTCTGCTTATTTTTTTGTTGAAAAGAACTTATTTGTGCATAGAATGTCTGCTTGTTTTGGCTGAACCTATCTAAACTGAACTTATTTTAACTTATCTGAACTTACTTGAACTTCTTTTTGCTGAAATAAATCAAAATAAGTTAAAATAAGTTGAAATAAACAAACCCTTAGTGTTGTAGTGATGTAGATAAATATAGATAAAGTTTTTGCAACCAAATGCTCAACTACGGAAATCAACATCAGAGCGAAATAACCTCAACAGGCACACCTTTAAGGAAGGTTTTTCACTTTCCAGCCTAAACTACATCGTATTCTAGGCTAGAGTAGGCGAGTGCGCGAGTAGCAACCTTAGAAGCCAAAAGAGAGGGCAAATCAAATCCGATGATAAAATTGAAGACTTTTTCATTTCCCTCCATCTAACTTCAGTTGTTAACACAAAAAGATGGTTGGATGGTAAGCAATGGATTGTAGTTTTCAAGTGTATTGACTTACCATATATGGGATAGACTAGACACAAAATGTTCGGACTCGAATAAGAATCCTGATTTGGTTATGGATCTGAGGGTCAGACACAAAAAATTCTAAAAGCAAGACCTGATTTTTGTGTTATGTGGGAATATTAGAACTGTTCCGGGAGGCTCTTGGCTGATCTGATGTAAAACTTCAGCTCCAAGTCTCCAACCACTCTTTTCTGATTCACTAGTATGAGACTGGATACGGGTTCACAATTCGCTACTTAATTTGCTAAATTAGACCAAAAACGTACAATTTCCTGTATTCGCCTTTTCAATTCGCGGTTGTAAACTTGTAATTAGAGAATTAGGTAACACTGGTTCCAACCTTTATTAGGAATTTACTACTCCTTTTTGTAAGTCGTGAAAACATTATCCATGCGAAGTTGGTTTAAAACTTGCATGTATGTTAGATACTTTGATGACTCGAAGGCCCTTATGAGTTATGACAATTGCATTTTTCTGAACTCTGTTAACAAGTCCAGCCCTTAGATAACAGTATTTTTTTTTCGGTTTCTTGCCTGCCTTGTGACAACTATGTATGAAATTTGATGCTATGTTTCTGTTCATCTGTTTAACTTGGAGCCTCCTTTGGGATGTTTATGTTTGAATACTCTGATTTTATTCAGGCACCACCGGTCATAGTTTTCTCATCAGCTTGTGCTGGGCTGGCAGGTATGACCCCTCTCTCTCACTTTCTCAAACACACAGACACACACACACACACACACAGACACACACACAAACAGACACAGACACATACACACAGACACACACACACACGCGCGCGCAGAGGCATACATAAATGTCACACCCACGCTGAACACATAAGTCATCAAATTTTGCAGTTAATTGGTATTAATTTGCATCAACACCTGAGTCTTTCAGGTAGCAGGGATGATTATTCCTATTTTCTAATTATCATGGATGTCTGTTCTGAACATAAGTATTGCAAATTTTATATTTGCAGCTGTTGTTGGCATTGATGAATATTGATTCTGCTTGCTGTACGTCTAGTATGTATGGGAAGCGTTTTTTCCCGAGCTCCTTAGGCTGTTAATTTTCAAGAAACCTCCGGCAGTTGCTTGTTCATTTCAAGGTTGAGGGCCCCCGAGGCACATAAAACAATCTGTAAAAGAAAACTGCTATATTTTTCTTTTACATCTAATATTAGAAAACAATAAGAATGATAGGCCATGTGGGGATGGGACCATCAGACAGGATTTGAACTTTTTAATTTGCAGCTACTCCACTCGTCCTAGTTTTAATTGTACCTTGTTCTTGGTCTTCATTTTTGATTTTTTACATTCCAGGTGGTGCAGTTCCAGCGGTGGCTCAGCTTGTGTCTTCATCGTATCATGCTGTGATGTTATCTTCATCACAGGCTCCTCAGGATGAAAAGAGTCACAAATCTGGGACTTCTTCAACATAGAGATATACAGCCTGTTGACGGAAAAGAATTCCATTTGTGCTAGCACAAGTGACCTCTTCAGTGTGTTCAGGATCCTGCTTTGGGCCTATCTCTGAGGTGATGCTCATTTTATATAGAGTATTTCCTCTATCGTGTTTTGGCATTTTCACTGTTCTCTGTTGTGTTCCCGTGCAGTAATCTTGAGCCACCTTTCTTACATCATGTTTATACATATCATGATATAAGAAAGCATGCCGAGGACATATGTAGGGGATGTTTCTCCTTTTGTAATTCGCTTGTCAAAATTCACCAGGGGATTCTGGTAGATATTTATTGAATCCTGTACCCAATATTTATGAGGGTTTAACCCGTGTAGTTCGTCAAAGAGGCTGTAATGGAAAGCACTTGGTTTTTACCTCTTCTGTTTACTGGAAAAAATTCTTGTAATATAGTACTCCGTACATGTTTTGGATTTTGAATGTCATAGGTATTCGATTCACTGAATTTAGGGATCAGCTAATTCTCAGCACTTCATCTTTAGTACAGTAATTCAAC

mRNA sequence

AAATCTAGCTCCTCCCCTCTTCCGAATTTCGAATCATATTTACTGTGTACACGATCAGACTATTCACACCGTGGCACCGTCCCCCACTCCTCTCTCTCATATCGCCACCGTGCTCCGCCATGTGCCACCAAAATTAACCACCATTTTAAACTTCCATTAAAATCTTAGAGAAAATTAGGGTTTCGCAAGAAAAATGGCCAAGAATTCCTCAAATCCGAAAGTTGTGACTTCAATCACATGTCCACACTGTGCTGGTCCTCTCTCAAAAGAAATGGAAACTAGTCGTTGGACTGTGGCGCCGCTCGTCAGAGACAGCTTTTCAATGATTGGTTCTGCTGTTGGTGGCACCACAAGTGCATTCTATGCGTTCAATTATGTAATGCCGACTGTTTATAAATGGGTTAAAGGGCCAATGTGGCTGCATTTTCTAATCGGAGCACCACCGGTCATAGTTTTCTCATCAGCTTGTGCTGGGCTGGCAGGTGGTGCAGTTCCAGCGGTGGCTCAGCTTGTGTCTTCATCGTATCATGCTGTGATGTTATCTTCATCACAGGCTCCTCAGGATGAAAAGAGTCACAAATCTGGGACTTCTTCAACATAGAGATATACAGCCTGTTGACGGAAAAGAATTCCATTTGTGCTAGCACAAGTGACCTCTTCAGTGTGTTCAGGATCCTGCTTTGGGCCTATCTCTGAGGTGATGCTCATTTTATATAGAGTATTTCCTCTATCGTGTTTTGGCATTTTCACTGTTCTCTGTTGTGTTCCCGTGCAGTAATCTTGAGCCACCTTTCTTACATCATGTTTATACATATCATGATATAAGAAAGCATGCCGAGGACATATGTAGGGGATGTTTCTCCTTTTGTAATTCGCTTGTCAAAATTCACCAGGGGATTCTGGTAGATATTTATTGAATCCTGTACCCAATATTTATGAGGGTTTAACCCGTGTAGTTCGTCAAAGAGGCTGTAATGGAAAGCACTTGGTTTTTACCTCTTCTGTTTACTGGAAAAAATTCTTGTAATATAGTACTCCGTACATGTTTTGGATTTTGAATGTCATAGGTATTCGATTCACTGAATTTAGGGATCAGCTAATTCTCAGCACTTCATCTTTAGTACAGTAATTCAAC

Coding sequence (CDS)

ATGGCCAAGAATTCCTCAAATCCGAAAGTTGTGACTTCAATCACATGTCCACACTGTGCTGGTCCTCTCTCAAAAGAAATGGAAACTAGTCGTTGGACTGTGGCGCCGCTCGTCAGAGACAGCTTTTCAATGATTGGTTCTGCTGTTGGTGGCACCACAAGTGCATTCTATGCGTTCAATTATGTAATGCCGACTGTTTATAAATGGGTTAAAGGGCCAATGTGGCTGCATTTTCTAATCGGAGCACCACCGGTCATAGTTTTCTCATCAGCTTGTGCTGGGCTGGCAGGTGGTGCAGTTCCAGCGGTGGCTCAGCTTGTGTCTTCATCGTATCATGCTGTGATGTTATCTTCATCACAGGCTCCTCAGGATGAAAAGAGTCACAAATCTGGGACTTCTTCAACATAG

Protein sequence

MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAPQDEKSHKSGTSST
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo04012.1Spo04012.1mRNA


Homology
[Close]
BLAST of Spo04012.1 vs. NCBI nr
Match: gi|902236597|gb|KNA24451.1| (hypothetical protein SOVF_015700 [Spinacia oleracea])

HSP 1 Score: 266.2 bits (679), Expect = 3.200e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1 

		  

Query: 1   MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN 60
           MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN
Sbjct: 1   MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN 60

Query: 61  YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ 120
           YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ
Sbjct: 61  YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ 120

Query: 121 APQDEKSHKSGTSST 136
           APQDEKSHKSGTSST
Sbjct: 121 APQDEKSHKSGTSST 135
[Close]
BLAST of Spo04012.1 vs. NCBI nr
Match: gi|731344706|ref|XP_010683563.1| (PREDICTED: uncharacterized protein LOC104898215 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 224.9 bits (572), Expect = 8.200e-56
Identity = 117/136 (86.03%), Postives = 124/136 (91.18%), Query Frame = 1 

		  

Query: 1   MAKNSSNPKVVT-SITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAF 60
           MAKNSSN K+VT  +TCPHCAGPLSK+METSRWTV PLVRDSFSMIGSAVGGTTSAFYAF
Sbjct: 1   MAKNSSNSKIVTVPLTCPHCAGPLSKQMETSRWTVPPLVRDSFSMIGSAVGGTTSAFYAF 60

Query: 61  NYVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSS 120
           NYVMPTV K+V GPMWLHFLIGAPPVIV SSACAGLAGGAVPA+AQL SSSYHA MLSSS
Sbjct: 61  NYVMPTVRKFVIGPMWLHFLIGAPPVIVLSSACAGLAGGAVPALAQLASSSYHAAMLSSS 120

Query: 121 QAPQDEKSHKSGTSST 136
            + QD+KSHKS TSST
Sbjct: 121 HSSQDDKSHKSRTSST 136
[Close]
BLAST of Spo04012.1 vs. NCBI nr
Match: gi|902170450|gb|KNA07840.1| (hypothetical protein SOVF_168130 [Spinacia oleracea])

HSP 1 Score: 218.4 bits (555), Expect = 7.700e-54
Identity = 110/135 (81.48%), Postives = 121/135 (89.63%), Query Frame = 1 

		  

Query: 1   MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN 60
           MAK S+N KVVT + CP+CAGPLSKEMETSRWTV P +RDSFSMIGSAVGGTTSAFYAFN
Sbjct: 1   MAKTSTNLKVVTPLPCPNCAGPLSKEMETSRWTVQPFIRDSFSMIGSAVGGTTSAFYAFN 60

Query: 61  YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ 120
           YV+PTV KWV GPMWLHFLIGAPPVIVFSSACAGLAGGAVPA+AQL SSSYHA MLSSS 
Sbjct: 61  YVIPTVRKWVIGPMWLHFLIGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAMLSSSH 120

Query: 121 APQDEKSHKSGTSST 136
           + Q++ +HKS TS+T
Sbjct: 121 SSQNDNTHKSRTSTT 135
[Close]
BLAST of Spo04012.1 vs. NCBI nr
Match: gi|698524559|ref|XP_009759086.1| (PREDICTED: uncharacterized protein LOC104211689 [Nicotiana sylvestris])

HSP 1 Score: 200.3 bits (508), Expect = 2.200e-48
Identity = 102/136 (75.00%), Postives = 114/136 (83.82%), Query Frame = 1 

		  

Query: 3   KNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYV 62
           K++S     +++ CPHCAGPLSKEMETS+WTV PL+RDSFSMIGSAVGGTTSAFY FN+V
Sbjct: 12  KDNSGSSSSSNMRCPHCAGPLSKEMETSQWTVPPLIRDSFSMIGSAVGGTTSAFYGFNHV 71

Query: 63  MPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAP 122
           MP V +W+KGPMWLHFL+GAPPVIVFSSACAGLAGGAVPA AQL SSSYHA + SSS  P
Sbjct: 72  MPIVRRWIKGPMWLHFLVGAPPVIVFSSACAGLAGGAVPAFAQLASSSYHAAISSSSSPP 131

Query: 123 ---QDEKSHKSGTSST 136
              QDEK  KS TSST
Sbjct: 132 TVSQDEKMRKSRTSST 147
[Close]
BLAST of Spo04012.1 vs. NCBI nr
Match: gi|694324269|ref|XP_009353161.1| (PREDICTED: uncharacterized protein LOC103944420 [Pyrus x bretschneideri])

HSP 1 Score: 200.3 bits (508), Expect = 2.200e-48
Identity = 102/131 (77.86%), Postives = 112/131 (85.50%), Query Frame = 1 

		  

Query: 6   SNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPT 65
           S P+  T + C HCAGPLSK+METS WTVAPL+RDSFSMIGSAVGGT SAFY FN+VMP+
Sbjct: 4   SKPETSTGMRCHHCAGPLSKKMETSEWTVAPLIRDSFSMIGSAVGGTASAFYGFNHVMPS 63

Query: 66  VYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAP--Q 125
           V +WVKGPMWLHF +GAPPVIVFSSACAGLAGGAVPA+AQL SSSYHAV+ SSS  P  Q
Sbjct: 64  VRRWVKGPMWLHFFVGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAVVSSSSLPPTSQ 123

Query: 126 DEKSHKSGTSS 135
           DEK HKS TSS
Sbjct: 124 DEKMHKSRTSS 134
[Close]
BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
Match: A0A0K9RY54_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_015700 PE=4 SV=1)

HSP 1 Score: 266.2 bits (679), Expect = 2.200e-68
Identity = 135/135 (100.00%), Postives = 135/135 (100.00%), Query Frame = 1 

		  

Query: 1   MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN 60
           MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN
Sbjct: 1   MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN 60

Query: 61  YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ 120
           YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ
Sbjct: 61  YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ 120

Query: 121 APQDEKSHKSGTSST 136
           APQDEKSHKSGTSST
Sbjct: 121 APQDEKSHKSGTSST 135
[Close]
BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QKP8_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_168130 PE=4 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 5.400e-54
Identity = 110/135 (81.48%), Postives = 121/135 (89.63%), Query Frame = 1 

		  

Query: 1   MAKNSSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFN 60
           MAK S+N KVVT + CP+CAGPLSKEMETSRWTV P +RDSFSMIGSAVGGTTSAFYAFN
Sbjct: 1   MAKTSTNLKVVTPLPCPNCAGPLSKEMETSRWTVQPFIRDSFSMIGSAVGGTTSAFYAFN 60

Query: 61  YVMPTVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQ 120
           YV+PTV KWV GPMWLHFLIGAPPVIVFSSACAGLAGGAVPA+AQL SSSYHA MLSSS 
Sbjct: 61  YVIPTVRKWVIGPMWLHFLIGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAMLSSSH 120

Query: 121 APQDEKSHKSGTSST 136
           + Q++ +HKS TS+T
Sbjct: 121 SSQNDNTHKSRTSTT 135
[Close]
BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
Match: M5Y366_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa013216mg PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.700e-47
Identity = 102/132 (77.27%), Postives = 111/132 (84.09%), Query Frame = 1 

		  

Query: 6   SNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPT 65
           ++ K  TS+ C HCAGPLSKEMETS WTV PL+RDSFSMIGSAVGGT SAFY FN+VMP 
Sbjct: 2   ADSKPTTSMRCHHCAGPLSKEMETSGWTVPPLIRDSFSMIGSAVGGTASAFYGFNHVMPV 61

Query: 66  VYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAP--Q 125
           V +WVKGPMWLHF IGAPPVIVFSSACAGLAGGAVPA+AQL SSSY AV+ SSS  P  +
Sbjct: 62  VRRWVKGPMWLHFFIGAPPVIVFSSACAGLAGGAVPALAQLASSSYRAVVSSSSLPPTSE 121

Query: 126 DEKSHKSGTSST 136
           DEK HKS TSST
Sbjct: 122 DEKIHKSRTSST 133
[Close]
BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
Match: A0A067J952_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_06858 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 3.700e-47
Identity = 101/132 (76.52%), Postives = 110/132 (83.33%), Query Frame = 1 

		  

Query: 6   SNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPT 65
           S  K+ + + C HCAGPLSKEMETS WTVAPL+RDSFSMIGSAVGGTTSAFY FN+VMP 
Sbjct: 4   SKSKLQSKLRCHHCAGPLSKEMETSEWTVAPLIRDSFSMIGSAVGGTTSAFYGFNHVMPV 63

Query: 66  VYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSS--QAPQ 125
           V KWVKGPMWLHFLIGAPPVIVFSSACAGL GGAVPAVAQL SSSYHA + S S    P+
Sbjct: 64  VRKWVKGPMWLHFLIGAPPVIVFSSACAGLVGGAVPAVAQLASSSYHAAVSSPSLPPPPK 123

Query: 126 DEKSHKSGTSST 136
           D+K H S +SST
Sbjct: 124 DQKMHGSRSSST 135
[Close]
BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
Match: A0A0B0N1S1_GOSAR (Type II inositol-1,4,5-trisphosphate 5-phosphatase OS=Gossypium arboreum GN=F383_33581 PE=4 SV=1)

HSP 1 Score: 194.5 bits (493), Expect = 8.300e-47
Identity = 101/134 (75.37%), Postives = 114/134 (85.07%), Query Frame = 1 

		  

Query: 5   SSNPKVVTSITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMP 64
           +SNP  + +++C HCAGPLSKEMETS WTVAPLVRDSFSMIGSA GGTTSAFY FN+VMP
Sbjct: 3   NSNP--LRNLSCHHCAGPLSKEMETSEWTVAPLVRDSFSMIGSAAGGTTSAFYGFNHVMP 62

Query: 65  TVYKWVKGPMWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAP-- 124
            V ++VKGPMW+HFL+GAPPVIVFSSACAGLAGGAVPA+AQL SSSYHA   SSS  P  
Sbjct: 63  IVRRYVKGPMWVHFLVGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAFSSSSSLPPS 122

Query: 125 -QDEKSHKSGTSST 136
            QD+K HKS T+ST
Sbjct: 123 SQDDKMHKSRTNST 134
[Close]
BLAST of Spo04012.1 vs. TAIR (Arabidopsis)
Match: AT3G04040.1 (unknown protein)

HSP 1 Score: 171.4 bits (433), Expect = 3.800e-43
Identity = 86/120 (71.67%), Postives = 99/120 (82.50%), Query Frame = 1 

		  

Query: 16  CPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPTVYKWVKGPMW 75
           C HCAGPL+K +ET+ WTVAP +RDSFSMIGSAVGGT SAF  F++VMP V KW+KGPMW
Sbjct: 16  CHHCAGPLTKNLETNEWTVAPFIRDSFSMIGSAVGGTASAFIGFHHVMPIVRKWIKGPMW 75

Query: 76  LHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAPQDEKSHKSGTSST 135
           LHFL+GAPPVIV SSACAGLAGGAVPA+AQL SSSYHA  + SSQ PQ +  ++   SST
Sbjct: 76  LHFLVGAPPVIVVSSACAGLAGGAVPALAQLASSSYHAA-VHSSQPPQGQDKNQLHNSST 134
[Close]
BLAST of Spo04012.1 vs. TAIR (Arabidopsis)
Match: AT5G18250.1 (unknown protein)

HSP 1 Score: 169.5 bits (428), Expect = 1.400e-42
Identity = 85/122 (69.67%), Postives = 98/122 (80.33%), Query Frame = 1 

		  

Query: 14  ITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPTVYKWVKGP 73
           I C HCAGPL++ +ETS+WTV P +RDSFSMIGSAVGGT SAF  FN+ MP V KW+KGP
Sbjct: 10  IRCHHCAGPLTRNLETSKWTVDPFIRDSFSMIGSAVGGTASAFIGFNHAMPIVRKWIKGP 69

Query: 74  MWLHFLIGAPPVIVFSSACAGLAGGAVPAVAQLVSSSYHAVMLSSSQAPQDEKSHKSGTS 133
           MWLHFL+GAPPVIV SSACAGLAGG VPA+AQL SSSY A  + SSQ PQ +K +K   S
Sbjct: 70  MWLHFLVGAPPVIVLSSACAGLAGGTVPALAQLASSSYRAA-VHSSQPPQAQKDNKMQKS 129

Query: 134 ST 136
           +T
Sbjct: 130 TT 130
[Close]
BLAST of Spo04012.1 vs. TAIR (Arabidopsis)
Match: AT2G41945.3 (unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 2.100e-9
Identity = 30/92 (32.61%), Postives = 47/92 (51.09%), Query Frame = 1 

		  

Query: 13  SITCPHCAGPLSKEMETSRWTVAPLVRDSFSMIGSAVGGTTSAFYAFNYVMPTVYKWVKG 72
           S  CP C   L+   E   WT+ P++ D+ ++ GS +GG  SA +AFN  +P +     G
Sbjct: 28  SARCPRCLSLLNPNSEKGEWTITPVLHDAAAVAGSGIGGLLSAVHAFNTGIPYLQNRFSG 87

Query: 73  PMWLHFLIGAPPVIVFSSACAGLAGGAVPAVA 105
              L FL+G P ++V+S   A        A++
Sbjct: 88  SKRLSFLVGVPLLLVYSGVGAAFGESLQAAIS 119
The following BLAST results are available for this feature:
BLAST of Spo04012.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5
Match NameE-valueIdentityDescription
gi|902236597|gb|KNA24451.1|3.2e-68100.hypothetical protein SOVF_0157... [more]
gi|731344706|ref|XP_010683563.1|8.2e-5686.0PREDICTED: uncharacterized pro... [more]
gi|902170450|gb|KNA07840.1|7.7e-5481.4hypothetical protein SOVF_1681... [more]
gi|698524559|ref|XP_009759086.1|2.2e-4875.0PREDICTED: uncharacterized pro... [more]
gi|694324269|ref|XP_009353161.1|2.2e-4877.8PREDICTED: uncharacterized pro... [more]
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BLAST of Spo04012.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5
Match NameE-valueIdentityDescription
A0A0K9RY54_SPIOL2.2e-68100.Uncharacterized protein OS=Spi... [more]
A0A0K9QKP8_SPIOL5.4e-5481.4Uncharacterized protein OS=Spi... [more]
M5Y366_PRUPE3.7e-4777.2Uncharacterized protein OS=Pru... [more]
A0A067J952_JATCU3.7e-4776.5Uncharacterized protein OS=Jat... [more]
A0A0B0N1S1_GOSAR8.3e-4775.3Type II inositol-1,4,5-trispho... [more]
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BLAST of Spo04012.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo04012.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 3
Match NameE-valueIdentityDescription
AT3G04040.13.8e-4371.6unknown protein[more]
AT5G18250.11.4e-4269.6unknown protein[more]
AT2G41945.32.1e-932.6unknown protein[more]
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InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34459FAMILY NOT NAMEDcoord: 16..135
score: 3.5
NoneNo IPR availablePANTHERPTHR34459:SF1SUBFAMILY NOT NAMEDcoord: 16..135
score: 3.5

GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042545 cell wall modification
biological_process GO:0009664 plant-type cell wall organization
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0001510 RNA methylation
biological_process GO:0006412 translation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005618 cell wall
cellular_component GO:0022627 cytosolic small ribosomal subunit
cellular_component GO:0009506 plasmodesma
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003735 structural constituent of ribosome
RNA-Seq Expression