Spo15393 (gene)

Overview
NameSpo15393
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr6 : 10160249 .. 10166237 (-)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGTGAAAATTTCTGGAAGCTTTTTAGTCGTTGAATCTGATGATAATGAAAGGCCGGTGGTTGTATGGAAGATATCTTGTATACCTGATGGATCACAGGGGCAGTGCTGAAAATTAATATTGGGAGTGGCTACCCACAAATCCCATTGGTTCAAAAGTGAGTGATCAACTCACCTTGGATGTTGGTACTTACAACTAGACCTGGCCAAACTGACCCGGACCCGAAAAACCGACTCGATTGTTCCGATCTGTAACCCAAAATTGATCCGAAACGATGATCCGAAATTAATCCGAAAACCCAATACAACGGACCTGTAACCGAAACCGACCCGGAAGTGATTTGACCTGAAATGACCCACCCGAAACCGAATTGACCCGAACCGAAAATAACTATAAAATAAAAATCAACCCGAACTGTAGGGGGTTCTTTTGAGTGGTATTTTTCGTATTTCGTATAACTTGTAATTTGAACATTTGTATGTAAGTTTTGAGCATTTGGTGAACCTTGTTTAAGGCCCACCAAAGACTCAAACTTGGTTTGATTTATCAAGAATGTGACCACTAGTTTTGACTTGATCTTCTCAATCCCACCACTAAAAGGGGAGCCAAATTCTAGGTTCACACAAGTGACATAATCAAATTTGAACATAGAAAAATCAAAGATCAAAATATAGAAAGTGCGTAAAATACCCCTACGACTTAGGATTTTTGAACTTCGATGGAGTCGTCACCAAAGAAGTTTTCGGGTCCGGTTCGGGAAGACCAAATGTGACTCGGGATAAGGCATAGGACTTAAAACCGATTGAAACTCGGGTAAGGGAACAAAATACTTATTGGAGTAAATTTTGCTATAGGTTCATACAATGCAAGCATCATTTTCGGAGTAAAATCCTATCATGACACTACTTTTAGGCGGGTGAACATGCATATTTAGGATATTGAAATTGCTAAGTTTGTAAGGTGATCACTTTCGTTTAAGTCAAATTTAGGGAGCCTAAACCGGTTGTTCAAAAATTTTCTTTGTTAAGCGTGATTAGAACTTGTGTTTTTGTTGATTTAGCATGTTGGGTGATGAAAGCAATAAACAAGTAAAGTATCATCACAATAGGAAATAAAGTGCGGAATTAGTAAAGATTATACATCACCACCTAGAAAAAGGAATAGGTGTAAACCACATTGCCTAGAAGGAATAGGCGAGTAAAATTGCATAAATAGTAAGTGCGAAATTGAAAGGTGTAATATTTAAAGGTGCGGAATTGAAATAAGAAATAAATAAGCAATAAAGCATTGAACTTGTATGATAGAAATTGAATAACTTGACTATTGAAAATCCGATTGAGGAACACTTGCTCAAAAGTGATTTTTCTCCCCACGAATCCAATCGTGTAAATAATCTCACTTTAAAATGAGTTACTCGTTAAAAAGTATCATTGGTTTTGTATTTGAATATTGAAATAGAACTTGAAATATTGAACTTGAACTTGAAGGTAGAACTTGAATATTGATATTAGGAGGCTTGATTCTCAAAGATTATACCTTTCATGTTAAAGATCTTATCTTTAATGTGCTCCATGACTTGAAAGTGTTACAATTTAAAGAGAGTTTGCTCTCATTTACATACATTGAACTTTGAACATTAAAATTGAATATTGAACATAGAAATCGAATATTGAACATGAAACTTGAAATTCATGAGTTCTAGTTTGAAGAAGGAATTGCACTTCTTCAAACATTCTTGAACATTTGTAAATCTAGGGTTTTTGTAAAACACTAGTAGAAAAATCGGCATGTGCTTCCCTTCAAGTGCGGGCCTTTTGTAAATTGGCAGGACTTGAGAGCACAAAAAATAAAGAAACAATGCATATTTACAAGTGCGGGCTCATTTTAAAAATTTGGCAGCACTTGACTTCAAGTGCGGGCTCTTTAACTCAAGTGCGGGCTCGTTTAAACGAGCCGCACAAAATATTTTCTAAAAATAATTCCCAATTTTTTTTCATTTCACTCTTCTCTTCTCTGGTTTCCCTAAAACCTACTCTCACCTCTGGTATTTCATTTCCCGCTTCTATCACCTTCCCCTCTCTGATTTCTCTTCTCTTCCCCTCTCCGTTTCTCTGGCAGGAAATCAATACTAGCAGCACACACCGCACTCCCCACCGTCGCGTCGCCGTTGCTGCTCCCCACCGTCACATCGCCGTTGCTGCTCCCTACCTCAGCGTCGCCGTTGCTTCTTTCCACCGCCGCGTCGCCGTTGTTGTTCCCCCACCACAAAATACGTCCTCTTCCTTCCGCCGCCACAACACAAAGGCGTCGCTCCTCCTTATCTCATATAGGTTTGTAATTTAAATTTAATTATTTGTTTCTTATAATAAGCTTGTTACTGTAATGACAAATTTATAAGGAAATGACGAATTAATTATAACTGGAAATGTGTATAAGCTTAGGTTGTTACGAATCTGTTTAAGCTTTCTTTGGTTTACCTGTTTCTGAGCTTACTAAGGATGCATTTAAGGGTATTGGGTTTACACAAATATGACTCAGGTTTATCACTTTTACCATTTTTTTTAATTGCTCTTTCTAAATATGTTTATTATTGTTTTTGTTTGTCCATACTCGAAGAACAGTGCTGTAATTGCACAAAATAATCAAATATTACCTGATTTATGTATTAATCAAATTAGTTAGTAAAGCCGTATTTTAGTTGTTTTTGCAAGGGTGATTGTAGTGGGGTGCTGAATGTAGTATGTAGTCGTCAAGGGAGCCGTGTTTTAGCTGATTTTGCAATGGTGAGTTGGTGATTGTAGTGGGGTGCGGAATGTAGTAGTCAGGGAAGCTATGTTTTAGTTGTTTTTGCAATGGTGGCTGTAGTTGGGTGCGGAATATAGTAGTCAGGGAAGGCGTGTGTTATGCTGTCGTTGCATATGTGCTGCTAAGAGTGATCACCCTTGTCCAGTTAGTTAGTTTCTTATTTGGATCCTGATGACTTGCATGGTGATGTAGTAGTTTGTACTTCCAGGCTCTAGCTAGTCTGTTTCTTTTATTTCTGTTTAAAATCTTTAGCTAGTTGGTTGGAAATGTGTGTTAAATGTTAATATATCAGTAGTTCAATACTTCAATAAATTATTCTTATACTTCTCTACAGTTGATGTGTGGACCTTTGTGGCTTTGTATCTTCAGCTACTTGCTTTTTGCCTTGTGTATACCCGTAGAAACTTTCTTTATGATGGTAGACTCTAATTTTTATTGTATTCTGGATGAAAGCATGCATAGATGAAATTAGATGCCCACTGATCTTGTATGTGCCTATGTTGANTAGTTCAATACTTCAATAAATTATTCTTATACTTCTCTACAGTTGATGTGTGGACCTTTGTGGCTTTGTATCTTCAGCTACTTGCTTTGTTGCCTTGTGTATACCCGTAGAAACTTTCTTTATGATGGTAGACTCTAATTTTTATTGTATTCTGGATGAAAGCATGCATAGATGAAATTAGATGCCCACTGATCTTGTATGTGCCTATGTTGAAAAACGATAACTTTATGTTAACCTGCTTAATATTAATCGATAGTCGGAACTTTATGCCTTGAAAGTCTGTATGGCGGGAAAGTCATCCACTACCTATATTTTTGTTAGAGAAGTTTTCCATGTAATGCATACGACTACATGTGAGAAATGATGTTTCCTAGCTGAATTTTTTCTTATGTTTTCTAGCTGAATTTGCAGTTCATGTCAGTTAGATTGCTGAGTTGGAGTTTTCTATTAGAAGCTTTTTTTAACCTTTTGAGCAGTATATAACAATATTTATTTAAATGAGTTTTAGAAACATTAAAAGTCTAATAAACATTTTCCTCTAAATTTTCAATTTTCATGTAACTACTCTATGTTCATTGAAGACGAAGGAGAGATTGGGCAGATATGGTGTCAAAATTGTGCGTCGTCCGACTCGAATGGCTGACAAACCTCCTCCTATTTACAAAGAGGTCTGATTTTCAATTCTCTGTACTAGTTGGTTTAAGATTCTTTGTATTAGATGCTTTGCCTCGATGATCAGTGCCATATTTTCTTTAACTTTTAAGCTATGGCATGCATATATTTCTTGTAATTAGTTTCTTATTGTTTGACGTTTATTAAACTTTATAGAATTTATCATGTATAATTCTTTGCAAGTTGCGATTATGATATTTATATTTTGGTCATTTGTCCTATGTGATTATCCGTTTTTGGTAGGTTAATCCGGTATGAGTTTCTCATAATTTTTGTTTTCATGTTGGTGGTACATATTTTTTTGGTTATTTGCTTCACTTTGCAATGACTCGTGGGTTTCTTTGTTGTTACTTGTAATTGTAAGTGTTATTTATGGGTAGAAACAAGTCTAATAACACCTAAAATGATTTAGAAGTTAATGTTATTTAAGGCCTCTACTAATGAGTTTGCATCATGGGAGGGATGTTTCCTAATATCTCAGAATTCGATGCCTTTATCAAGCCAATGCTTCAATGTCATGTTACTGGAGTGTTTTGGTTGGTATTCCTTATTGTTTAAATATTGAAATTGTGAAAACACTTTATATGGTTTTGCATCACATTTAACTCAATTCTGAACTCATAGTTTATACTAGTTAATGATCAAATAAGGAATTTGGCTGATTTTAAACATAAAACTACTAATTTAAGTGTATTAAACATGGAAAGACTTTAATATACTCATTTTAGTTCATTAGTTGAAAGTTGGGCCCGAAATTAGCCATTTTAGTCAAAATGTTCACAAAAATGGGTGAGAATGAGTATTTGAAACATAAAACTAAGTGTATCAAACATGGAAAGACTTTAAAATAATTATTTAAGTTCATTAGTTGAAAGTTGGGACGGAAATTAGCCATTTTAGTCAAAATGTGACCGATAATGAACTAACGAGACTTAAATGTGCATAACTTCACCAAAATGGGTGAGAATGAGTTTTTGAAACATAAAACTAAGTGTATCAAACATGGAAAGACTTTAAAATACTCATTTAAGTTCATTAGTTGAAAGTTGGGACTGAAATTAGCCATTTTAGTCAAAATATGACCGATAATGAACTAACGAGGCTTAAATGTGCATAACTTTACCAAATGGGTGAGAATGAGTCTTTGAAACATAAAAATAAGTGTATAAAACATGAAAACGCTATAAATACTCATTTAAGTTCATTAGTTGAAAGTTGGGACCGAAATTAGCCATATTAGTCAAAATGTGACCGATAATGAAATAACGTGGCTTAAATGTGCATAACTTTACCAAAATGGTTGAGAATGAGTCTTTGAAACATAAAACTAAGTGTATTAAACATGAAAATACTTTAAAATACTCTTTTAAGTTCATTAGTTGAAAGTTGGGACCGAAATTAGCCATTTTAGTCAAAATGTGACCGATAATGAACTAACGAGGCTTAAATGTGCATAACTTCACCCAAATGGGTGGGAATGAGTCTTTCAAACATAAAACTAAGTGTATTGAACATTGAAAGGCTTTAAAGTACTCATTTAAGTTCATTAGTTGAAAGTTGGGACCGAAATTAGCCATTTTAGTCAAAATGTGAACGATAATGATCAAACGAGGCTTAAATGTGCATAAATTCACCAAAATGAGTGAGAATGAGTCTTTGAAACATAAAACTAATTGTATTAAACATGGAAAGACATTAAAATACTCATTTAAGTTCATTAGTTGAAAGTTGGGATCGAAATTAGCCATTTTTATTATTATACGGTTCATTATTTATTTGTTATGAACAAATTAAGTCTTAATTTATTGTACGATTCAATATTTATAATATAACTAATGTGTATATGTAATTTTTGATGGTTGATATTTTAAAGGTATTCAATAATCCGAAGGAGCGACCTTTCACCTTTGAGGAGATAGATGAAGTTCGAGAAATGTTGGCAAACTCCATTACTAGTGATTGTCTTTGATATTTCCTTGTAATGAATCTTAAATTATGGATGCT

mRNA sequence

ATGTCAGTGAAAATTTCTGGAAGCTTTTTAGTCGTTGAATCTGATGATAATGAAAGGCCGGTGGTTGTATGGAAGATATCTTGTATACCTGATGGATCACAGGGGCAGAAATCAATACTAGCAGCACACACCGCACTCCCCACCGTCGCGTCGCCGTTGCTGCTCCCCACCGTCACATCGCCGTTGCTGCTCCCTACCTCAGCGTCGCCGTTGCTTCTTTCCACCGCCGCGTCGCCGTTGTTGTTCCCCCACCACAAAATACGTCCTCTTCCTTCCGCCGCCACAACACAAAGGCGTCGCTCCTCCTTATCTCATATAGACGAAGGAGAGATTGGGCAGATATGGTGTCAAAATTGTGCGTCGTCCGACTCGAATGGCTGACAAACCTCCTCCTATTTACAAAGAGGTATTCAATAATCCGAAGGAGCGACCTTTCACCTTTGAGGAGATAGATGAAGTTCGAGAAATGTTGGCAAACTCCATTACTAGTGATTGTCTTTGATATTTCCTTGTAATGAATCTTAAATTATGGATGCT

Coding sequence (CDS)

ATGTCAGTGAAAATTTCTGGAAGCTTTTTAGTCGTTGAATCTGATGATAATGAAAGGCCGGTGGTTGTATGGAAGATATCTTGTATACCTGATGGATCACAGGGGCAGAAATCAATACTAGCAGCACACACCGCACTCCCCACCGTCGCGTCGCCGTTGCTGCTCCCCACCGTCACATCGCCGTTGCTGCTCCCTACCTCAGCGTCGCCGTTGCTTCTTTCCACCGCCGCGTCGCCGTTGTTGTTCCCCCACCACAAAATACGTCCTCTTCCTTCCGCCGCCACAACACAAAGGCGTCGCTCCTCCTTATCTCATATAGACGAAGGAGAGATTGGGCAGATATGGTGTCAAAATTGTGCGTCGTCCGACTCGAATGGCTGA

Protein sequence

MSVKISGSFLVVESDDNERPVVVWKISCIPDGSQGQKSILAAHTALPTVASPLLLPTVTSPLLLPTSASPLLLSTAASPLLFPHHKIRPLPSAATTQRRRSSLSHIDEGEIGQIWCQNCASSDSNG
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15393.1Spo15393.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo15393.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15393.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15393.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15393.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006120 mitochondrial electron transport, NADH to ubiquinone
biological_process GO:0006354 DNA-templated transcription, elongation
biological_process GO:0009627 systemic acquired resistance
biological_process GO:0000302 response to reactive oxygen species
biological_process GO:0032880 regulation of protein localization
biological_process GO:0010468 regulation of gene expression
biological_process GO:0031347 regulation of defense response
biological_process GO:0006508 proteolysis
biological_process GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
biological_process GO:0006412 translation
biological_process GO:0009853 photorespiration
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006511 ubiquitin-dependent protein catabolic process
biological_process GO:0006814 sodium ion transport
biological_process GO:0080129 proteasome core complex assembly
biological_process GO:0006486 protein glycosylation
biological_process GO:1902600 proton transmembrane transport
biological_process GO:0051788 response to misfolded protein
biological_process GO:0006744 ubiquinone biosynthetic process
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0005747 mitochondrial respiratory chain complex I
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0048038 quinone binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0003735 structural constituent of ribosome
molecular_function GO:0003723 RNA binding
molecular_function GO:0051539 4 iron, 4 sulfur cluster binding
molecular_function GO:0008137 NADH dehydrogenase (ubiquinone) activity
molecular_function GO:0004252 serine-type endopeptidase activity
RNA-Seq Expression