Spo15389 (gene)

Overview
NameSpo15389
Typegene
OrganismSpinacia oleracea (Spinach)
DescriptionUnknown protein
Locationchr6 : 10352583 .. 10353992 (+)
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCTTGAGGCACTTAGGGAGGGTGTTGTACCAAGCAACAGGAAATATTAGGGTGATTTTGCAAGGCACCAAACTAGACCAAGCTTCTTCTAAATGTGACCCTACCTTCATCATGTCTTTCAAGAACTCCTCCGGCTTTAACCGCCAAACGAGGCGGCTGGCCACCGAGGCTACGGATGCTACCACTACTACCACCTCCGCGGATAAGCTCCGGCTCGCCGAGGAGTCTCTCCGAACTGTCATGTATTTGAGTTGTTGGGGTCCATCTTGAATTTCAATAATTGTTCGTGTAAATTATTGATTAAGTTGAGTATTTTAATTTTAGTAAATATATGTACACGTATTAATTATTACTTCTAGCCTTGTAAATATGTAAATAAATTTGATTGAGTTTTACTAGATTCGTCTCAATAAATAAATATAATTTTTGTTTATTTACAATAAGATATTGAAAAATAGCAAGAAATGCTCAAAGTAAAAGAGGAAACTCAACATTATAGGAGACCTACAAGAAAAATCAACATTAAATGTCGTATACATGCATCATGCATGCCTTTATAACAATAACAAACTACTCCCTTCGTTCCGGAATACTCGCAACGGTTTCACTGGACACGCTTGCCAATGCACAACTTTGACCATCAATATTTTCAATTATATATTATAAAAACTTATAAAATATTTATATTTTGAAAATATATATTAAGATGAAGCCAACAATATATTATATGTTAACACTCATTTTCATATACTATAAATAAAATAGGGTCAAAGTAAATCATGTGAACAGTGTAAAAAGTCAAACCGTTACGAGTATTCCGAGACGGAGGGAATAGTTTATGACCGAAAAATTACAAAGACATTTACTCCGTAAATTATAAGGTTATTTTGGGATTGTTTTTGTCTTTGGTCATCTTTGGTAGACCCATTGCAAAAATTAAAAAACTATATATCCGGAGGGTGTATTTGAGTCTTGAGATATAGAAGTATCCTCTATGACGTTTCAGTTAGATAAGGGGCATTTAAGGTTTTATTATGTTCGACTTATTTTGACTTATTTCAGACAAAATAAGTTCAGATAACTTCAGATAATATAAGTTCAGTCAAAATAATTCTAACAGAACGGAGCCTAAGTGAGAAAAAGAGAAGAAAAATCATCATTTTAACTTTTTTTAATAGGTAACACAATTAAACTTACGATAATTAATATTAAATTTACCCGGAAAAAAAAAAGGAGTAATAATGCTACCCAATCTCATCTATATTGCACTATAAGTACCAATTTTGTTTGTTACACTTACATGTGAAGCAAATTCCAAAATACATCATCCACATTATGGCCTATCTTAATAACTTTCATTCCTACCACACATAGCAAAGCCTTAAACCAACCCTCTACCTTCTCTAG

mRNA sequence

ATGAGCTTGAGGCACTTAGGGAGGGTGTTGTACCAAGCAACAGGAAATATTAGGGTGATTTTGCAAGGCACCAAACTAGACCAAGCTTCTTCTAAATGTGACCCTACCTTCATCATGTCTTTCAAGAACTCCTCCGGCTTTAACCGCCAAACGAGGCGGCTGGCCACCGAGGCTACGGATGCTACCACTACTACCACCTCCGCGGATAAGCTCCGGCTCGCCGAGGAGTCTCTCCGAACTCAAAGCCTTAAACCAACCCTCTACCTTCTCTAG

Coding sequence (CDS)

ATGAGCTTGAGGCACTTAGGGAGGGTGTTGTACCAAGCAACAGGAAATATTAGGGTGATTTTGCAAGGCACCAAACTAGACCAAGCTTCTTCTAAATGTGACCCTACCTTCATCATGTCTTTCAAGAACTCCTCCGGCTTTAACCGCCAAACGAGGCGGCTGGCCACCGAGGCTACGGATGCTACCACTACTACCACCTCCGCGGATAAGCTCCGGCTCGCCGAGGAGTCTCTCCGAACTCAAAGCCTTAAACCAACCCTCTACCTTCTCTAG

Protein sequence

MSLRHLGRVLYQATGNIRVILQGTKLDQASSKCDPTFIMSFKNSSGFNRQTRRLATEATDATTTTTSADKLRLAEESLRTQSLKPTLYLL
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Spo15389.1Spo15389.1mRNA


Homology
The following BLAST results are available for this feature:
BLAST of Spo15389.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15389.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15389.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 0
Match NameE-valueIdentityDescription
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BLAST of Spo15389.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 0
Match NameE-valueIdentityDescription
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GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016556 mRNA modification
biological_process GO:0006457 protein folding
biological_process GO:0009867 jasmonic acid mediated signaling pathway
biological_process GO:0009231 riboflavin biosynthetic process
biological_process GO:0009658 chloroplast organization
biological_process GO:0045454 cell redox homeostasis
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0016099 monoterpenoid biosynthetic process
biological_process GO:0000023 maltose metabolic process
biological_process GO:0000413 protein peptidyl-prolyl isomerization
biological_process GO:0035265 organ growth
biological_process GO:0019252 starch biosynthetic process
biological_process GO:0051604 protein maturation
biological_process GO:0008152 metabolic process
biological_process GO:0006470 protein dephosphorylation
biological_process GO:0032984 protein-containing complex disassembly
biological_process GO:0010207 photosystem II assembly
biological_process GO:0006364 rRNA processing
biological_process GO:0006631 fatty acid metabolic process
biological_process GO:0006007 glucose catabolic process
biological_process GO:0006662 glycerol ether metabolic process
biological_process GO:0044237 cellular metabolic process
biological_process GO:0009790 embryo development
biological_process GO:0016126 sterol biosynthetic process
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0006397 mRNA processing
biological_process GO:0006399 tRNA metabolic process
biological_process GO:0034051 negative regulation of plant-type hypersensitive response
biological_process GO:0045036 protein targeting to chloroplast
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0042793 plastid transcription
biological_process GO:0008654 phospholipid biosynthetic process
biological_process GO:0009657 plastid organization
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0009813 flavonoid biosynthetic process
cellular_component GO:0008287 protein serine/threonine phosphatase complex
cellular_component GO:0009579 thylakoid
cellular_component GO:0005829 cytosol
cellular_component GO:0005886 plasma membrane
cellular_component GO:0010007 magnesium chelatase complex
cellular_component GO:0009536 plastid
cellular_component GO:0009295 nucleoid
cellular_component GO:0009349 riboflavin synthase complex
cellular_component GO:0005739 mitochondrion
cellular_component GO:1990904 ribonucleoprotein complex
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0009543 chloroplast thylakoid lumen
cellular_component GO:0009523 photosystem II
cellular_component GO:0016020 membrane
cellular_component GO:0005634 nucleus
cellular_component GO:0009507 chloroplast
cellular_component GO:0009570 chloroplast stroma
molecular_function GO:0005509 calcium ion binding
molecular_function GO:0009055 electron transfer activity
molecular_function GO:0015035 protein disulfide oxidoreductase activity
molecular_function GO:0047134 protein-disulfide reductase activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016851 magnesium chelatase activity
molecular_function GO:0000166 nucleotide binding
molecular_function GO:0005504 fatty acid binding
molecular_function GO:0003723 RNA binding
molecular_function GO:0005525 GTP binding
molecular_function GO:0045430 chalcone isomerase activity
molecular_function GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen
molecular_function GO:0005506 iron ion binding
molecular_function GO:0020037 heme binding
molecular_function GO:0000906 6,7-dimethyl-8-ribityllumazine synthase activity
molecular_function GO:0016740 transferase activity
molecular_function GO:0004722 protein serine/threonine phosphatase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003755 peptidyl-prolyl cis-trans isomerase activity
molecular_function GO:0008253 5'-nucleotidase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0046422 violaxanthin de-epoxidase activity
RNA-Seq Expression