Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGTTTTTGTTGTGTAAGTTAGTTAAACTTTCAAGGAGTTGTGTTGCTAAGGCCCATAATCTGGTAGCCATTGCTAGGAAATGGGCCTAATTGTATTTCCACTTATATCATATTGACATATTGTAATATTGTGTTGTAAAAAAAAAAAAAAAAACAAGTACCAACTGAGCAAAGATGTTTGTTTGATGAACCAAGGAGGAGAGAAAACTATCAAATGAATCATGGCAACATCATATCTCCTCCCTTTGTCACCACCAATTCATCATTACAACAACAGCAACAAACACAACTTCCTCTTCACTTCCACCCAACAACCTAAACTTCTACACCACCATTATTTCCAATCCAATTCAAAAAACAACAAATCATCACCATATCAACCACTCATTTCACGCTACCTCACCTTATCCAAACACAAAAAACCCAGAAATTTCAAAGTTTCAGCTGCTTCCTCTGAAGATGCTGCTGCTGTAATTCCATCTGAAACTACCCAGGAAATTGTGTCTGCTGCAACTTCTGGTGGCGATGGAGTTTCAGCTGTTATTTCAATTCTTTTGTTCATCGCCTTTCTTGCCCTCTCCATCCTCACAATTGGGGTAATTACTAATTAGTTCATTATTCATTATTCATTATTCATTATTCATTATTTTCTGGGTTCATTTTGTCTAGAAATTAACTATTTTTGTTTGTAATTTATTCAGGTTGTATACATTGCGGTGACAGATTTTCTGACCAAGAGAGAGAAAGAGAAGTTTGAGAAAGAAGAGGAAGCCAAAAAGAAGAAGGGCGGGAAGAAGGGCAAAGTGAAAGCCAGAGCTGGTCCTAGAGGTTTTGGTCAAAAGATTGATGAATTTGAAGACGATAATTTTTGATTTTTCTGAGTAAGTAAGTAATTAAGTGTTTTTGTTCAATTTTTAATCAATTGTATTGAACATTAGAGGCTAATTTCTTCAATTAAATCGGTAAGCACATTCACAAGTTGTTTCAAATTGCTGGTTGTTGTATATGATGATCAAGGGGTCCTTGGAGTTGTTGGTGATGAAGTATTGCACTTGTTGCTGTGTAAGCTGTACATAACCTGTTTGTTGTAAAGTTAGATGATTAACCAACCCATAAACTTAGGTTAGGAGTGATGATCCAGATGCACACAGAATCATGAGTTCTTGTTCGGTCTCAAGGGCGGCATTAAGCACTTGGAGTTGGGACTAAGCTACCATGAAAACTATGGTTAGTTAATTAGGCCTTATCGTTGAAAGTAAAACAAGTTTGAAATAACTATTACTCAACTAACAACTATCAAGTGGAATCAACTTGAAATAATTATTTCAAGGTCTCCATGTGCATCCTTGAGATTCATCCGCAAATCCAGATCATGGGTTCATGTACAGACCCTTGGGAGGACTGGTATCGGTATGAAATCATTGGTACTAATGCACTCTGGCGTTTCCCATGGTCGATTCTAGACACCTTCTCTATCTACTGATATAATTGCCCCATAAAGTTTAAATCATTCGGACTAAATGTTATAAAACCATCGTCATTAACTTCACCAC AGTTTTTGTTGTGTAAGTTAGTTAAACTTTCAAGGAGTTGTGTTGCTAAGGCCCATAATCTGGTAGCCATTGCTAGGAAATGGGCCTAATTGTATTTCCACTTATATCATATTGACATATTGTAATATTGTGTTGTAAAAAAAAAAAAAAAAACAAGTACCAACTGAGCAAAGATGTTTGTTTGATGAACCAAGGAGGAGAGAAAACTATCAAATGAATCATGGCAACATCATATCTCCTCCCTTTGTCACCACCAATTCATCATTACAACAACAGCAACAAACACAACTTCCTCTTCACTTCCACCCAACAACCTAAACTTCTACACCACCATTATTTCCAATCCAATTCAAAAAACAACAAATCATCACCATATCAACCACTCATTTCACGCTACCTCACCTTATCCAAACACAAAAAACCCAGAAATTTCAAAGTTTCAGCTGCTTCCTCTGAAGATGCTGCTGCTGTAATTCCATCTGAAACTACCCAGGAAATTGTGTCTGCTGCAACTTCTGGTGGCGATGGAGTTTCAGCTGTTATTTCAATTCTTTTGTTCATCGCCTTTCTTGCCCTCTCCATCCTCACAATTGGGGTTGTATACATTGCGGTGACAGATTTTCTGACCAAGAGAGAGAAAGAGAAGTTTGAGAAAGAAGAGGAAGCCAAAAAGAAGAAGGGCGGGAAGAAGGGCAAAGTGAAAGCCAGAGCTGGTCCTAGAGGTTTTGGTCAAAAGATTGATGAATTTGAAGACGATAATTTTTGATTTTTCTGAGTAAGTAAGTAATTAAGTGTTTTTGTTCAATTTTTAATCAATTGTATTGAACATTAGAGGCTAATTTCTTCAATTAAATCGGTAAGCACATTCACAAGTTGTTTCAAATTGCTGGTTGTTGTATATGATGATCAAGGGGTCCTTGGAGTTGTTGGTGATGAAGTATTGCACTTGTTGCTGTGTAAGCTGTACATAACCTGTTTGTTGTAAAGTTAGATGATTAACCAACCCATAAACTTAGGTTAGGAGTGATGATCCAGATGCACACAGAATCATGAGTTCTTGTTCGGTCTCAAGGGCGGCATTAAGCACTTGGAGTTGGGACTAAGCTACCATGAAAACTATGGTTAGTTAATTAGGCCTTATCGTTGAAAGTAAAACAAGTTTGAAATAACTATTACTCAACTAACAACTATCAAGTGGAATCAACTTGAAATAATTATTTCAAGGTCTCCATGTGCATCCTTGAGATTCATCCGCAAATCCAGATCATGGGTTCATGTACAGACCCTTGGGAGGACTGGTATCGGTATGAAATCATTGGTACTAATGCACTCTGGCGTTTCCCATGGTCGATTCTAGACACCTTCTCTATCTACTGATATAATTGCCCCATAAAGTTTAAATCATTCGGACTAAATGTTATAAAACCATCGTCATTAACTTCACCAC ATGGCAACATCATATCTCCTCCCTTTGTCACCACCAATTCATCATTACAACAACAGCAACAAACACAACTTCCTCTTCACTTCCACCCAACAACCTAAACTTCTACACCACCATTATTTCCAATCCAATTCAAAAAACAACAAATCATCACCATATCAACCACTCATTTCACGCTACCTCACCTTATCCAAACACAAAAAACCCAGAAATTTCAAAGTTTCAGCTGCTTCCTCTGAAGATGCTGCTGCTGTAATTCCATCTGAAACTACCCAGGAAATTGTGTCTGCTGCAACTTCTGGTGGCGATGGAGTTTCAGCTGTTATTTCAATTCTTTTGTTCATCGCCTTTCTTGCCCTCTCCATCCTCACAATTGGGGTTGTATACATTGCGGTGACAGATTTTCTGACCAAGAGAGAGAAAGAGAAGTTTGAGAAAGAAGAGGAAGCCAAAAAGAAGAAGGGCGGGAAGAAGGGCAAAGTGAAAGCCAGAGCTGGTCCTAGAGGTTTTGGTCAAAAGATTGATGAATTTGAAGACGATAATTTTTGA MATSYLLPLSPPIHHYNNSNKHNFLFTSTQQPKLLHHHYFQSNSKNNKSSPYQPLISRYLTLSKHKKPRNFKVSAASSEDAAAVIPSETTQEIVSAATSGGDGVSAVISILLFIAFLALSILTIGVVYIAVTDFLTKREKEKFEKEEEAKKKKGGKKGKVKARAGPRGFGQKIDEFEDDNF Relationships
The following mRNA feature(s) are a part of this gene:
Homology
BLAST of Spo09210.1 vs. NCBI nr
Match: gi|902171812|gb|KNA08049.1| (hypothetical protein SOVF_166220 [Spinacia oleracea]) HSP 1 Score: 336.7 bits (862), Expect = 2.600e-89 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of Spo09210.1 vs. NCBI nr
Match: gi|731348878|ref|XP_010685711.1| (PREDICTED: uncharacterized protein LOC104900073 [Beta vulgaris subsp. vulgaris]) HSP 1 Score: 183.0 bits (463), Expect = 4.800e-43 Identity = 122/187 (65.24%), Postives = 143/187 (76.47%), Query Frame = 1
BLAST of Spo09210.1 vs. NCBI nr
Match: gi|848847965|ref|XP_012835233.1| (PREDICTED: uncharacterized protein LOC105955935 [Erythranthe guttata]) HSP 1 Score: 126.7 bits (317), Expect = 4.100e-26 Identity = 81/155 (52.26%), Postives = 106/155 (68.39%), Query Frame = 1
BLAST of Spo09210.1 vs. NCBI nr
Match: gi|1021047334|gb|KZN05114.1| (hypothetical protein DCAR_005951 [Daucus carota subsp. sativus]) HSP 1 Score: 120.9 bits (302), Expect = 2.200e-24 Identity = 88/181 (48.62%), Postives = 113/181 (62.43%), Query Frame = 1
BLAST of Spo09210.1 vs. NCBI nr
Match: gi|702480723|ref|XP_010033110.1| (PREDICTED: uncharacterized protein LOC104422479 [Eucalyptus grandis]) HSP 1 Score: 118.2 bits (295), Expect = 1.500e-23 Identity = 72/104 (69.23%), Postives = 85/104 (81.73%), Query Frame = 1
BLAST of Spo09210.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QLC7_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_166220 PE=4 SV=1) HSP 1 Score: 336.7 bits (862), Expect = 1.800e-89 Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
BLAST of Spo09210.1 vs. UniProtKB/TrEMBL
Match: A0A0J8BZ25_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_7g173480 PE=4 SV=1) HSP 1 Score: 183.0 bits (463), Expect = 3.300e-43 Identity = 122/187 (65.24%), Postives = 143/187 (76.47%), Query Frame = 1
BLAST of Spo09210.1 vs. UniProtKB/TrEMBL
Match: A0A022S3U5_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015129mg PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 2.800e-26 Identity = 81/155 (52.26%), Postives = 106/155 (68.39%), Query Frame = 1
BLAST of Spo09210.1 vs. UniProtKB/TrEMBL
Match: A0A166DD38_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_005951 PE=4 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 1.600e-24 Identity = 88/181 (48.62%), Postives = 113/181 (62.43%), Query Frame = 1
BLAST of Spo09210.1 vs. UniProtKB/TrEMBL
Match: A0A059AGZ1_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J02035 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.000e-23 Identity = 72/104 (69.23%), Postives = 85/104 (81.73%), Query Frame = 1
BLAST of Spo09210.1 vs. TAIR (Arabidopsis)
Match: AT2G29180.1 (unknown protein) HSP 1 Score: 107.8 bits (268), Expect = 6.900e-24 Identity = 73/148 (49.32%), Postives = 102/148 (68.92%), Query Frame = 1
The following BLAST results are available for this feature:
BLAST of Spo09210.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr) Total hits: 5
BLAST of Spo09210.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL) Total hits: 5
BLAST of Spo09210.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt) Total hits: 0
BLAST of Spo09210.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR) Total hits: 1
InterPro
Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
RNA-Seq Expression
Co-expression
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