Spo16799 (gene) | SpinachBase

Overview


Name	Spo16799
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	E3 ubiquitin-protein ligase RHF2A (6.3.2.-) (RING-H2 zinc finger protein RHF2a)
Location	chr6 : 27098911 .. 27109005 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTTTTCAATGCAACTTTATGGTACATTTGATTGGCATGATCAAATTATTTAATGTTCTTTAAGTTGATGTTGAATTTGTTTACTTCTTTTTAATGTGTACCCTGCTGAAACTGGGAATTTTCAACACTATTCCCCTTTCGAAATTTCATGGGTATCTTTGTTTTTATTTTTATAATTATATTTGTTGTGAACTGGGTTTTGTTATTCATCATTAATTATTATTGCGGTATAAAAAGAAAAACCCTTTTGCGCATGTGTGATTTGCAGTTAAATGGGTTTGAGGAATTTTGAAATTTCTCCTTTAATGAATTTGTGTTTGTGGCAACCCTTTGAAATTTGAAAACCCTTTTTTTTTGTGGCAATTTATGTTCTATGTATCATACTGATGGAGGGATAGCTACTCGAATTGGATTGAGATAGAATGTTTTTAAGGAGTAAATGAAACAAAGAAATACCCTGTTTAGATTCATTGGAAAATGGAAGTTGTTTTGTGTAATTTCAGAGAGAGAAAGTGAGATATGTGAATTCATGGATATGATTTCACTCCTGAACTATACCACGTCTAAGTTCTAACCTCCGCTTTGACGACCTAAAGTCCTCTAAAACTTTCATTAAAGACCTAAAGTTTCGAAACTTATTGTGAAGAGAATGATGTTGGATGGCTGCTAAAGTTGTTCTTTCTATTACGTATAGTCAGAATTTGTCTTGTGTTTATAAGGAGTTGTGGAAACCGCATTCCAAATAGTTGGGGTCGATATTCTGAAACACTGCTTCTGGAAAATAAATTATAGTAAGGCTTCTTGTGCTAATGCATTTTGGCGGACCATGCATACAAGACCTTGTAGGAGCTTGAAATCTTGGTAGCTATATTAAAGAAAGCATCCCAAACACAACAGAAAAATGATAATGTAAGAGGCAGAAGCATGGGGAAAATTGTAAGCATTAGGCACCTACGATATGAGCCTTAAATGCCAACCTAATCCAGGAAACTCTATAGTGGGAAATGGGAAGCATCCAATTTGTACCTATAAGTGGTCCACTTAAACACAAAGTGCAAATATCCTTTTTATTATGGTAGGAAGGTTGAATAATTTGAGGCAATCACAAATATCACTCCTTTTTTATATAAGGCACTTGATATGTTGAAAACTCTCCCTCCTTAAGGGAAGATCCTATCATGTGCCCATGGATCTCTTCAAGCCTTATAGGTTTTAGAGTCCTAAGTCAATCACATTGCTGCAACTGGTCTCCATGAGGGGCTTTTGCTACAGTAATACTTAAGCAACACTTCTATAACACCTTGTAGATTTATTTCCTATTCTTATATGTGCTTTCTGTTTGACTTGGAATAGGAGCTTTCAGGAATGGACACTGTTAGGGAGAGTTATGATCATTCAACGAATATTGGAACCTTTCTAGAAGGTGAAATGCAAGGAGCATGTGATGATGCCTGCAGCATATGCCTTGAAGATTTTTCTGAAAGTGATCCTTCAACGGTATTGTTGTGTAATTCTTTTGATTGTCTGTATTTTCATGGTACGATTTGTCTTTGCTTACTTGAAATAGTTGAATATAAAGATAATACTCCCTCCGTCCCATATTAGTTGTTACACTTACTTTTGCACAAAGTTTTGGGTGATAAGTGGTTGTTTGGTTATCAATTTTTATTTTATTGGAAAAGTAGATGTGATAGGAGTTAGTGGAGTATTTTTTTTAATTGAATGAGAGAGGGTGTGGGGACAAAAAAACATTTAGTGGGAAGAGAGAGACAATATAATAATTGTGGGGTCATTCCTAATTTAGAAGTGTAACAACTAATCTGGGACGGACGAAAAAGGAAAGTGTAACAACTAATCTGGGACGGAGGGAGTATCATAATATCAACTAAGTTGATATTCATTATTTCATTTCTATGTTTATTACCTGAATTTGAAAGTAAGATATTGACTTTAGTTGAGCTGAAACTTTTTGGGAGATGTGGCTTTCTGCTATTAAAACATTATATTGTTCAGACAACATTTTGGTCCCCTCTCCAAAATATAAGTGTGTCTGTTTAGCAAATCAAAGCATACTTAGTATGACAATGAAGGCAAACTTCTAGCATACTTGTCTTTTATACAAATAAACCAAGTTCTTTAAAAGCAAACATCTTCTATTGCACCAAGTGCGAAAGGTTAGAGAGGAGATTATTGTGCTGAAAGCCTGAAACTATCATATTCGATAGCCTGTATTTTGCTTGCGAGCCAACAAATCAATGCATTTTGATTGGGAAGGATCAATTTGATGTAGAGAAGAAGCATCTAAGAAAATCTTAAACTAGTCGCTTAGGTGCCTATTTCTTATATAGAGATGAAAGTTTGAAGTTGATTCCTTATCAATATCAAGTCATCGAGGAAGAGGAATCTGCATACAATTTTAAGAGATAAGAGTTTCAAACATCAGTTGATTCAGTTGAAGTCATTTCTTGTGATTTAAGAGTTATGAAGCAATTTGATTTAGTTGCTGAAATGTTTTCTGACTGGTGGAATATCCATAAAGATCAGGGACATGGATTTCCCCCTCTTCTGCAGTTTCCTGTACACACCTTTGTCCTTGTTTAGACATCTTTTTTTTTTTTTATCTTCTTTTGCTTAAGCACACCACAGGCTTTCCCACCTTTGTCCTTGTTTAGAGCTTCTTTTGCTTAAGCACACCACAGTTATACTTCTGTTGGTTTGCATCTACACCTTCATCAATACATATTCTAGTAAGCTTTTGGGGAAGGGGTCTAATCTGGAAGTTTGGATCTTTTGTTGCACTATCAGATAATTCTCCTACAACATTTCAGTTGCCTCACTTGCCTGGTGGAGTTGAAAATTGTCATTGTACACCTAAACATAATATGCTGAATCCGGGAATTCAACTCATCAGCTGAGAATTTAACCTTCTTTTTGTGAACTAATGCTGAGGAAAAAGTCCAATTTCATTCCATTTGCATGAGCTATAAGGTTGTCGATCCATCAAATTTATGTGGCAAACAGAAAAGACATCTTTTTGGAGTTTGACATCTTTAAACTTCAAATTTCTGTTACATTGTTATGTCATTTGAGGGTGAAACCTTTTAGAATATCGTTGTAATTATAATCTTTATCAATCTGTTAACCTCGAGAGAAGAAAAGATAGGTCTTTAAAGAACAGGATTGAAGACTGAGTAACAGCAAAATCCCTCTATGAATGGCCATGGGGCCTTTCTCCTTGTGTCGATTGTATATTTTTATGCTATGCTGTGGTATATGTATGATTTTCAGAGGTGGAAATCCTAATAAAGATGTGTAAGTGAGGTTGTGCTTTGAAGTTTGTAAGTAAATATTTCCTATGCTGCTTTCCACTGTTCAAGGTATCCGCTATTAAGGCTTCCCTTGAGACTGCTCAGTGCTCACAACCTTTTCTGGACCCTGTCTTTTCATAATTGCTTCAAAACCTACTTCCTACCAGGAGAAGATGTTTTTTATTCTCTTTGAAGGTGGTAGACGCTATTCACGGGGTTGCACATAATGGGAATTGTTCTAGTCGAGATAAAAGAAAATTACTGTGATCCTGAGGTTAAAGCTTATTTAAAGCATTTCTTTTCCCAGGGTAAATTTATACCTAGCGGGGGTGAAATCCTGGTTCTTCGCCAAAATCATGACCCGCTGTGGTTGTTTACACATTGTTCTTGGTAGACATCACTTGTCAAATTCAACCAACCTGAAACAAGTGGGCATTTAACAAAAAAAATCGACCCAAAGTCAAAGTTTGTACAAGCCCAATTTTTTTGGTCAAACCTAACTTGACCCAAAGCATAGCATTAAAAGTTACTTAGTATAAAAGAGGAGAGTGTGATTTTTCCTTCAAAAAAATCTTTCAACTGTTTAGCATGGTTTTCATTTAACTTGGACATCATTTGTATGGACGGATTTGGCTATGAAAGACTATGTTTATTAGTTACCATGACCTGATATTTGCAGCATATATTTTGTATTTACTTTTGATGAGACAAGCTCATGCGTATTGCACTTAAAATATGCGAGTAAATATTAAGGGGTCCTAAAATCCTTTAACCCATTGACCTGAAAATGACTTGAACCTGAAATTAATTGTCCTCGACTGGTTGGCTTCTCTATATTGAGAAACAAAATAAGGCTAAGATAATGTCCTGATGGAGTTATCTTTGTGCATTGTGATAATTGCGCCTTACATTTGATGCGTGGTTCATCTTTCTTCTCACACCATTTTTTTTCCAACATTTTCAGGTAACTGATTGCAAGCATGAGTTTCACCTTCATTGCATCCTTGAATGGTACTAATCTTGACACTTTCGATGATATGTTCTAACTAAGTACTATTAAGATTTACTTGTTCCTCCTCAGGCAACTTTTCAACTTTAGGGAGAGACACTTTGTTGATTTTGGATGAAAAAAATTAGATCCATTAATTTCCTAAGTTCTACTCACTTTTTCCATTTTAATCCGTTTTTCTAAGTTATTCTCACTTTCCTTCCATCCGTTTTTCTAAATTCTACTCAATTTTACTTTTTGAGGGACCCAATTGTAGGTACTCCGTACTAATTCTCTTATTTCCTATTTATTTGATTTCCTCCTAAAAAAAAGTACCACATGAGTGGTTTCCCTCTCGAGTTCTCCTTTGTTTTTGTTGTTACGATAATCCTAATTGTCAAGGAATTCAAACAATTCATCCTAGGTAAAGGCTAACGAGAAAAGTGTAATCATGTCACGTCCTTTCTTTTCCGTTCCTTCTTCCACTAATAATCCATATACAAGCCTTTTTATCTCCTTCGAAATTAGTGGTTGTGCCAACAAGTAATCACTGTTCTTCGAGTCCGGATCCTTTAGAGTTTTAATAAAACTCTACAAGGTAGAGTTGTATCTAAACCATACATTTTAAAATCAATGGCTCATATTGATGAGAAAAAATAGGGGAATTTTGGAAAGATAATATATGAACCATTGATTTTTCATTCAATGGTTGATATTGTTCAAAGTCTACCTTGTAGAGTTATTTAAGAACTCTAGAGGATCCAAAACCCTGTTTTTCCCTTTATCTTGATCACTACCTGTTTTTCTATCTCTCCCTTTTACGTTTCAAAATTGATTTCTACATAATTAAAACTATTCTAACGGTTAATATTGGTAGATAAGCATACTGTTCGAATTTGTAGGAGCCAGTGAGTCACCATATGAAGAAGGAAATTTGGATCAAAGTTTTTCTTCTGTAGCCATTTTCATCTAACATACTATTTTCTTCAGAATAATAGAATATACACATGAATAGTTTCAGTAGTAGAATGATATGCCTTCCTAGTTTTTTTTTTAATGGTGATTCTTTTTCTTTGTATATTACTCCCTCTGTCTCTATTTGTTGTTCCTAGTTGGAATACAGGAAGAGACCTTGAAAAGTAGATAAAAATATAATAAAAATAGGTAAGTGAAGTTAATGGGGGTAAGTGGGATCCATTTGGTAAATGGGGTAAATAATGATAATAAAGGGGGGGTGGAAGGAGTGCGTGGAGGTAAGTAGGAGTAGGACCCATTGGGTGGGGTATTTGGCCTTAAAATAAGGAGAAATGCTGGCCTTATAAGGAAATATTCTAAATAAGAAATTGAATTTGATACAGATTATATAGGAAAGTAGAAAAACCAGATAGAAATAGAGGAACTAATTTATTTTTTTCCTTTTAGGTTATGCTTGAAATGGGGATAGAAAATGAAAATAAATATGAATAGTTGTAGGGAGAGATGAGATAGTGATAAGAATAGAGAATGAGTTAGTGATGGTGTGATGAGAAGGACAGGAGGGGAATACTTACCCTCATTTTGGGGTTAAAGTTACCATATGGTGGGGGTGGTTAACTATTACCCTCACAATGAGGGTTATCCCCTTATCCATCTCTATTTCTCATCCACAACTAGCTTATTTACTTTATCACCACCTCATCCTCTTTAACATCATCTTCATTCACCTTCATTTTTCCAAGTTTGACTTTTATTACCCTCTTAATGCATTATCCTCATCCAAGATTCCAAGCATGCCTTTAAATTGGAAACTGATATAAAGAGACTTACTAGGGGCCGTTAAACCAAACAATACCAAACTAACAAAGTACATAATAAAATGACTGAACCATGAACCGCCTAAACAAACAACACAAAAAATCCATGATGTCGAGATTGTAGTTTTAGGTGTTCAAAGTAGCGAGGGAGACAAACCTTTCAGCAAGAAGTTCTTTTCACATTCATATTGCTGATTTTCCGCTTTATATGCCTAAAATTCCTACTACAACAATCAATGAGTTTCTACACGGTTTTAGGTTAATCCTTTTTGTTGATTTCCTTTGTTGAGTCTATTTATTTACTGCAGCCCACAGGTTCATTCTTTTTGTAAATTTTTTCTTCTTGTCATTTTCCATTTTGAACTTCTTCTCCACATCTTTTTACAGTTATAAATTTCCTGTTCTTTTTATTACTCTGTACAATTGTTAGTATGGTTTGGATATATTTTTGAAAATTTTATCCTAACTAATGCCATTCCGCTTTTAATAATCCCAACTATTTCATATCTCACAAATTCACAACAATCCCTACTACTTGGGGTGTCTTCCAAAAGTGCCTTGGTGACCTAAAGAAATCGGTTACTAGTGAATGATGTTTCAAGCTCTTATTGGTCAATTGTAGCAAACTATAGGTATATTTTGTGGGAAGATAAGGCCCATGGTGCTAGACCAGCTCTTCTTGTTGGAAAGTTGGTTGATAGACATTAGAATCTAGGCGGTCTTTGTATCAATGATTGTTTTTCTTGGAATTGTTACCATGAGTATGTCTCTTGGAATTTTTACCATGAGTATGTCTGAAATTTGAAGTTTATATCTGGCCTTAGGCTCTTAGATTTCAGCGTGTTAGTGTTCTAGTTGTTTATGACCTTAGTGGGTATTGACGCCTGCACTGCCAACATTCTCTTACCATGCGCAGACATTTAATTTACTTAAATTGTGTTCTGAAGGTGCCATAGAAGCTCAAACTGCCCAATGTGTTGGCGACCAATCAGCCTGAAAGATGAAGCAAGGTTTCTAGCTCCTGCTTTTTTGCACATTGAATTTTCATTTGTGCAATCTTTTGTTTGTTTATTTGATGGACACTTTTTCTGCATCTTGGAGTAGTCAGCAATTGCTGGAATCTGTGGAACATGAGAGGAGTCTCAGAGCTAATAGATCGAGGAATCGGACATCATTCTACCATCCCAGCCTTGAGAATCTTGAAGTTCATGTTTGTTTTCTATCAGCCTGCCTTGTTTTTTTCCTTGTTTAATCTTTTCTTCTAAATGTATTTGACTTCAGTTTGTCTTATATCATGGAAATATCTCTGAACACTGGCAGTTACCTACGGATGTTGGTGAAGTTGATCTTGAAGAGCATATATTTCAACACTTGGCTGCTGCAGCTGCCATGAGAAGTGGACATCTTGTTTTCCGGAGGGAAGGCCAAAGGAGCTGGTCGTCTTCATCGGGACATCATCCGTTCTTTGTTTTCTCATCTTCTAATGCTCTTCATGATGGTTCTATTTTGAATTCTATGAATCCTGTTGGAGATGAAAGTCATTCTCCTTCAGTGTCTCTAGGAAGTGCTACCATACTGAGCCGGAGTAGTTCAGATGCTCCAGTGCCAGTCTCACTTCCTCCACCACAAACTGATGAGGGTTATGCTCATAGGATTCGATCTAATTTTGCATCAGCAAATCGACAAAGTGTTTTATCAGAAACTCGGTATACATCTAATTCCCTGTTATTGCTTTTGGATTCTTATACATGTATTGGCTGGCTAAGTTACTGTGTTTTTTACTATGACTTTCATGTTTATCTCTCCCTGTCTAGAAGCCTTGGTAGTCAATCTTTCATGAGAAGTCAGAACACGGCAGAACAATCAGAGCTGCAGTCAGAATCTTTAAGATCTCGCTTTAATTCCTGGTCAATGAGGTATTATTTCACAGATTTTGCAGTTCCGTAAAAACATATTGGAGCTACCGCGCGAGATTCTGTTTCAGCATCTTGAAGCTAACAATTTGTTATTGTAAAGGTACAAGGAATGTATATCGAGGAATACTAGAGGCTGGAAGGAGAGGCTATTTGCTCGCAGCACATCCATGGCCGAGCTTGGTACTGAGGTTCGCAGAGAGGTGAATTCTGGGATTGCTCGCATGATGGAAAGACTTGATAGCAGAATGAATAATGGATCTGATCGTGCTTCCCAATCAAGTCATGCAGGTAGGACCACCACAAATGATTACTCAAATGACTGATCGCCAGATGTCAGCTCCTTATGCTACAAGTTCAGTCTCAGATTAAGCTTCCTTGTTGTTCAGAACTTTTATACCTTTTATTCTTCATGGTAAGCCTTCACTTTGTATTTAGTTATGAAGTTGAATTTTCTATCGTTCTTTCGTCAAGTTTCCCCTCTTTCTAGCAGTGAATTCTTGTGGTAGTTGTTTTCTCTCCCAGTTTGCCTTATTTTTGTGCGGTTAAACATTTGAAGTTACCAGTTATTTCGGGTATGAAACGATGCCATGATGATGGCATAAGTGTCCTTGGTGTCTTGAGTTCCGGCCGTGTATCATGTATGGTGCCTGCAAGATGAACTCCGGGCCCTCGAGGGGATCCCCGAGGCGGAGCCTCCGACGCTAAAGCCAGTACAATTGATAGTATTTTGGGGAGAGAGAGAGTAAGATGGCTTCTCTAGGGTTAGAGAATGACGTCTTTTACCTTGCCCCATGTGGGGTATATCCGTATATATAGTGGTCCTGTTGGGCCTTTGGGGCTCTTTAAGCTTTCTGAGTGATATTGGGCTTGAGTGGGTCTCATTAGCTTTGGGCTAAAATAGTATGCCTATTTTAGCACCCAAACACCAGTAGCTTGGAAAGCCTGTGTGAAGTTGACATTTTATTTAGGAGGTGGCATTATTCATGTCAGTGCTAAAATTATATAGTGATCTTTGTGTAAGGTATCATGACTTGTGTCAAGCATCCTCTACTACTGGGTAAAAATAGATTACAATCTTAAGATAGACCGATGTTGATGTAGTAGAAGACGCGAAATGGAATATTGCAAAATACTCTTGTGTGTTAGTGAACCATAAATAGCCAGTTAATTGAACCCCTCTACTACTAATATAATTGAGCAAACCCCTCTGACTGTTCGGAGTCAAGTACTCACAAATTCACAGTACATGTACTTGAAAATATTGTTGCTCCGTTGCCGCCAATACCTCTCAGAGATATAATGACTGCTGGGAGCAGCTAACGTCGTGTATTTTATCTGAAAGCTCTAGCTCTAGCTCTAGTGGCGCTTCATAATCAATTATGAAGTACATGATTTACATCATTGCCATATGTAATGACCATATTGAGTATAGTTTTTAAGCGCGCTTGTAATGCATGTAATATTGTATGTTCCCTGAAGACACTGATGCAAATCATTTCTGCTGTGGGGATTTTTCAACCTTACGTTTAGTCACATTATTATTGAGTTCTGAAACATTATGGACTTCTTGATCGAGCAGAGATATGGCCTGTTCAAATTGCAATATTTTGTCTTTATTTTTTTATTTATTTATTGTCTAAAATAACATTCACTAGGAAATAAAATTACCCTTTTGATTTTTGTGACATTAGGTTTGTTGGGTCAGAAAAAAATTTACAATTTTGTGTGTGTTTTTGTTTTGTTTTCAGGTGACGGAAATCTTGTTTTGTACTGTGCTGAACTTTATTCCATTATGGAACGATCAAAGATCGTATAATCAATTGTTTGAAGACCATCTATGTATATTATGTATGTATGTATGTATATATTGATTAAAACAGACAATTCTTGGGAAGTCGCCTCCATAATCTGATATATGGATGCTTGTAAATCTATGAATGCAACTTATGTAATGAAGCACAAGAAATTCTTTCGCCTTCTAATCATTGTAGAGTGGACTAGTGGATTATATATCATTGCCATTCTTCATTTCTTTGTGTCTGAAAATTAGACTACAATCTAGGCGATCTTACAGAGGATAACCCAG

mRNA sequence

ATGGCTTTTTCAATGCAACTTTATGGAATGGACACTGTTAGGGAGAGTTATGATCATTCAACGAATATTGGAACCTTTCTAGAAGGTGAAATGCAAGGAGCATGTGATGATGCCTGCAGCATATGCCTTGAAGATTTTTCTGAAAGTGATCCTTCAACGACGCTATTCACGGGGTTGCACATAATGGGAATTGTTCTAGTCGAGATAAAAGAAAATTACTGTGATCCTGAGCAATTGCTGGAATCTGTGGAACATGAGAGGAGTCTCAGAGCTAATAGATCGAGGAATCGGACATCATTCTACCATCCCAGCCTTGAGAATCTTGAAGTTCATTTTGTCTTATATCATGGAAATATCTCTGAACACTGGCAGTTACCTACGGATGTTGGTGAAGTTGATCTTGAAGAGCATATATTTCAACACTTGGCTGCTGCAGCTGCCATGAGAAGTGGACATCTTGTTTTCCGGAGGGAAGGCCAAAGGAGCTGGTCGTCTTCATCGGGACATCATCCGTTCTTTGTTTTCTCATCTTCTAATGCTCTTCATGATGGTTCTATTTTGAATTCTATGAATCCTGTTGGAGATGAAAGTCATTCTCCTTCAGTGTCTCTAGGAAGTGCTACCATACTGAGCCGGAGTAGTTCAGATGCTCCAGTGCCAGTCTCACTTCCTCCACCACAAACTGATGAGGGTTATGCTCATAGGATTCGATCTAATTTTGCATCAGCAAATCGACAAAGTGTTTTATCAGAAACTCGAAGCCTTGGTAGTCAATCTTTCATGAGAAGTCAGAACACGGCAGAACAATCAGAGCTGCAGTCAGAATCTTTAAGATCTCGCTTTAATTCCTGGTCAATGAGGTACAAGGAATGTATATCGAGGAATACTAGAGGCTGGAAGGAGAGGCTATTTGCTCGCAGCACATCCATGGCCGAGCTTGGTACTGAGGTTCGCAGAGAGGTGAATTCTGGGATTGCTCGCATGATGGAAAGACTTGATAGCAGAATGAATAATGGATCTGATCGTGCTTCCCAATCAAGTCATGCAGGTGACGGAAATCTTGTTTTGTACTGTGCTGAACTTTATTCCATTATGGAACGATCAAAGATCGTATAATCAATTGTTTGAAGACCATCTATGTATATTATGTATGTATGTATGTATATATTGATTAAAACAGACAATTCTTGGGAAGTCGCCTCCATAATCTGATATATGGATGCTTGTAAATCTATGAATGCAACTTATGTAATGAAGCACAAGAAATTCTTTCGCCTTCTAATCATTGTAGAGTGGACTAGTGGATTATATATCATTGCCATTCTTCATTTCTTTGTGTCTGAAAATTAGACTACAATCTAGGCGATCTTACAGAGGATAACCCAG

Coding sequence (CDS)

ATGGCTTTTTCAATGCAACTTTATGGAATGGACACTGTTAGGGAGAGTTATGATCATTCAACGAATATTGGAACCTTTCTAGAAGGTGAAATGCAAGGAGCATGTGATGATGCCTGCAGCATATGCCTTGAAGATTTTTCTGAAAGTGATCCTTCAACGACGCTATTCACGGGGTTGCACATAATGGGAATTGTTCTAGTCGAGATAAAAGAAAATTACTGTGATCCTGAGCAATTGCTGGAATCTGTGGAACATGAGAGGAGTCTCAGAGCTAATAGATCGAGGAATCGGACATCATTCTACCATCCCAGCCTTGAGAATCTTGAAGTTCATTTTGTCTTATATCATGGAAATATCTCTGAACACTGGCAGTTACCTACGGATGTTGGTGAAGTTGATCTTGAAGAGCATATATTTCAACACTTGGCTGCTGCAGCTGCCATGAGAAGTGGACATCTTGTTTTCCGGAGGGAAGGCCAAAGGAGCTGGTCGTCTTCATCGGGACATCATCCGTTCTTTGTTTTCTCATCTTCTAATGCTCTTCATGATGGTTCTATTTTGAATTCTATGAATCCTGTTGGAGATGAAAGTCATTCTCCTTCAGTGTCTCTAGGAAGTGCTACCATACTGAGCCGGAGTAGTTCAGATGCTCCAGTGCCAGTCTCACTTCCTCCACCACAAACTGATGAGGGTTATGCTCATAGGATTCGATCTAATTTTGCATCAGCAAATCGACAAAGTGTTTTATCAGAAACTCGAAGCCTTGGTAGTCAATCTTTCATGAGAAGTCAGAACACGGCAGAACAATCAGAGCTGCAGTCAGAATCTTTAAGATCTCGCTTTAATTCCTGGTCAATGAGGTACAAGGAATGTATATCGAGGAATACTAGAGGCTGGAAGGAGAGGCTATTTGCTCGCAGCACATCCATGGCCGAGCTTGGTACTGAGGTTCGCAGAGAGGTGAATTCTGGGATTGCTCGCATGATGGAAAGACTTGATAGCAGAATGAATAATGGATCTGATCGTGCTTCCCAATCAAGTCATGCAGGTGACGGAAATCTTGTTTTGTACTGTGCTGAACTTTATTCCATTATGGAACGATCAAAGATCGTATAA

Protein sequence

MAFSMQLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFTGLHIMGIVLVEIKENYCDPEQLLESVEHERSLRANRSRNRTSFYHPSLENLEVHFVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEGYAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKECISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAGDGNLVLYCAELYSIMERSKIV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo16799.1	Spo16799.1	mRNA

Homology

[Close]

BLAST of Spo16799.1 vs. NCBI nr
Match: gi|902146441|gb|KNA05058.1| (hypothetical protein SOVF_193840 isoform A [Spinacia oleracea])

HSP 1 Score: 568.9 bits (1465), Expect = 6.400e-159
Identity = 309/359 (86.07%), Postives = 315/359 (87.74%), Query Frame = 1

		  
Query: 6   QLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIMG 65
           +L GMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPST        H+  
Sbjct: 146 ELSGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTVTDCKHEFHLHC 205

Query: 66  IVLVEIKENYCD------------PEQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 125
           I+    + + C              +QLLESVEHERSLRANRSRNRTSFYHPSLENLEVH
Sbjct: 206 ILEWCHRSSNCPMCWRPISLKDEASQQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 265

Query: 126 FVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 185
                        LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP
Sbjct: 266 -------------LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 325

Query: 186 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 245
           FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG
Sbjct: 326 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 385

Query: 246 YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 305
           YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC
Sbjct: 386 YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 445

Query: 306 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 351
           ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG
Sbjct: 446 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 491

[Close]

BLAST of Spo16799.1 vs. NCBI nr
Match: gi|902146442|gb|KNA05059.1| (hypothetical protein SOVF_193840 isoform B [Spinacia oleracea])

HSP 1 Score: 563.1 bits (1450), Expect = 3.500e-157
Identity = 308/359 (85.79%), Postives = 314/359 (87.47%), Query Frame = 1

		  
Query: 6   QLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIMG 65
           +L GMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPST        H+  
Sbjct: 146 ELSGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTVTDCKHEFHLHC 205

Query: 66  IVLVEIKENYCD------------PEQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 125
           I+    + + C              +QLLESVEHERSLRANRSRNRTSFYHPSLENLEVH
Sbjct: 206 ILEWCHRSSNCPMCWRPISLKDEASQQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 265

Query: 126 FVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 185
                        LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP
Sbjct: 266 -------------LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 325

Query: 186 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 245
           FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG
Sbjct: 326 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 385

Query: 246 YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 305
           YAHRIRSNFASANRQSVLSETR LGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC
Sbjct: 386 YAHRIRSNFASANRQSVLSETR-LGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 445

Query: 306 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 351
           ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG
Sbjct: 446 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 490

[Close]

BLAST of Spo16799.1 vs. NCBI nr
Match: gi|359481051|ref|XP_002270570.2| (PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X1 [Vitis vinifera])

HSP 1 Score: 226.1 bits (575), Expect = 1.000e-55
Identity = 164/370 (44.32%), Postives = 219/370 (59.19%), Query Frame = 1

		  
Query: 5   MQLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPS--TTLFTGLHIM 64
           M++ GM+ V+ S +H T+   F+EG +Q ACDDACSICLE F +SDPS  T+     H+ 
Sbjct: 1   MEVEGMEEVKNSENHMTSAAAFVEGGVQEACDDACSICLEAFCDSDPSTLTSCKHEFHLQ 60

Query: 65  GIVLVEIKENYC----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEV 124
            I+    + + C          DP  ++LLE+VE ER++R    R+   F+HP+L + E+
Sbjct: 61  CILEWCQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRLTPPRS-AIFHHPTLGDFEL 120

Query: 125 HFVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHH 184
                         LP    + +LEE I QHLAAAAAM   H + RREGQRS SS+ G  
Sbjct: 121 Q------------HLPVGTNDPELEERIIQHLAAAAAMGRAHHIARREGQRSRSSAHGRS 180

Query: 185 PFFVFSS-SNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAP---VPVSLPPP 244
            F VFS+  NA   G +  S+  VG E+   ++++ S +I   +  D P   +P   P  
Sbjct: 181 HFLVFSTHPNATASGPVPASLVQVG-ENEPAAITVASPSIPLPAGGDEPSQEIP-QFPSV 240

Query: 245 QTDEGYAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQ--SESLRSRFNSW 304
           QTD   A   RS   +   + +    RS  SQS    Q+ A  SELQ  SESL+SR N+ 
Sbjct: 241 QTDHMSASASRS---AVTPRRISFNNRSSASQSSPPDQDRAGPSELQSFSESLKSRLNAV 300

Query: 305 SMRYKECISRNTRGWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSD 352
           SMRYKE IS++TRGWKERLF+R+ SMA+LG+EVRREVN+GIA   RMMERLD+R NNG+ 
Sbjct: 301 SMRYKESISKSTRGWKERLFSRNNSMADLGSEVRREVNAGIASVSRMMERLDTRENNGAG 352

[Close]

BLAST of Spo16799.1 vs. NCBI nr
Match: gi|731398415|ref|XP_010653244.1| (PREDICTED: E3 ubiquitin-protein ligase RHF2A-like isoform X2 [Vitis vinifera])

HSP 1 Score: 223.0 bits (567), Expect = 8.600e-55
Identity = 164/370 (44.32%), Postives = 217/370 (58.65%), Query Frame = 1

		  
Query: 5   MQLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPS--TTLFTGLHIM 64
           M++ GM+ V+ S +H T+   F+EG +Q ACDDACSICLE F +SDPS  T+     H+ 
Sbjct: 1   MEVEGMEEVKNSENHMTSAAAFVEGGVQEACDDACSICLEAFCDSDPSTLTSCKHEFHLQ 60

Query: 65  GIVLVEIKENYC----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEV 124
            I+    + + C          DP  ++LLE+VE ER++R    R+   F+HP+L + E+
Sbjct: 61  CILEWCQRSSQCPMCWQSISLKDPTSQELLEAVERERNIRLTPPRS-AIFHHPTLGDFEL 120

Query: 125 HFVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHH 184
                         LP    + +LEE I QHLAAAAAM   H + RREGQRS SS+ G  
Sbjct: 121 Q------------HLPVGTNDPELEERIIQHLAAAAAMGRAHHIARREGQRSRSSAHGRS 180

Query: 185 PFFVFSS-SNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAP---VPVSLPPP 244
            F VFS+  NA   G +  S+  VG E+   ++++ S +I   +  D P   +P   P  
Sbjct: 181 HFLVFSTHPNATASGPVPASLVQVG-ENEPAAITVASPSIPLPAGGDEPSQEIP-QFPSV 240

Query: 245 QTDEGYAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQ--SESLRSRFNSW 304
           QTD    H   S   SA     +S      SQS    Q+ A  SELQ  SESL+SR N+ 
Sbjct: 241 QTD----HMSASASRSAVTPRRISFNNRSASQSSPPDQDRAGPSELQSFSESLKSRLNAV 300

Query: 305 SMRYKECISRNTRGWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSD 352
           SMRYKE IS++TRGWKERLF+R+ SMA+LG+EVRREVN+GIA   RMMERLD+R NNG+ 
Sbjct: 301 SMRYKESISKSTRGWKERLFSRNNSMADLGSEVRREVNAGIASVSRMMERLDTRENNGAG 351

[Close]

BLAST of Spo16799.1 vs. NCBI nr
Match: gi|566209079|ref|XP_002322768.2| (hypothetical protein POPTR_0016s06670g [Populus trichocarpa])

HSP 1 Score: 221.5 bits (563), Expect = 2.500e-54
Identity = 157/369 (42.55%), Postives = 214/369 (57.99%), Query Frame = 1

		  
Query: 5   MQLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIM 64
           M++  MD  ++   H T+   F+EG +Q +CDDACSICLE+F ESDPST        H+ 
Sbjct: 1   MEVLEMDEAKKPEVHMTSAAAFVEGGIQDSCDDACSICLEEFCESDPSTVTNCKHEFHLQ 60

Query: 65  GIVLVEIKENYC----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEV 124
            I+    + + C          DP  ++L E+VE ER +RA  SRN T F+HP+L + E+
Sbjct: 61  CILEWCQRSSECPMCLQSISLKDPTSQELFEAVERERKIRAAPSRNATIFHHPTLGDFEL 120

Query: 125 HFVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHH 184
                         LP  V + +LEE I QHLAAAAAM       RREGQR+ +SS G  
Sbjct: 121 Q------------HLPVGVSDSELEERIIQHLAAAAAMGRTRHFGRREGQRNRTSSHGRP 180

Query: 185 PFFVFSS-SNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQ-- 244
            F VFS+   A   G + +S+  +G E+    VS+ S +    S  D P   +L  P   
Sbjct: 181 HFLVFSTHPGAQPSGHVSSSLTQLGGENEPAPVSVASPSTQLTSVGDEPPQQALQSPSVL 240

Query: 245 TDEGYAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQ--SESLRSRFNSWS 304
           TD+  +    S    AN Q V    RS  SQS + +Q+ A  SELQ  SESL+SR N+ S
Sbjct: 241 TDQS-SSASGSTAMPANNQGVSFNNRSASSQSSLPNQDRAGPSELQSFSESLKSRLNAVS 300

Query: 305 MRYKECISRNTRGWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSDR 352
           MRYKE ISR+TRGWKERLF+R++SM+++ ++VRREVN+GIA   RMMERL++R + G ++
Sbjct: 301 MRYKESISRSTRGWKERLFSRNSSMSDISSDVRREVNAGIATVSRMMERLETRDDGGDNQ 356

[Close]

BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QED6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193840 PE=4 SV=1)

HSP 1 Score: 568.9 bits (1465), Expect = 4.400e-159
Identity = 309/359 (86.07%), Postives = 315/359 (87.74%), Query Frame = 1

		  
Query: 6   QLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIMG 65
           +L GMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPST        H+  
Sbjct: 146 ELSGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTVTDCKHEFHLHC 205

Query: 66  IVLVEIKENYCD------------PEQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 125
           I+    + + C              +QLLESVEHERSLRANRSRNRTSFYHPSLENLEVH
Sbjct: 206 ILEWCHRSSNCPMCWRPISLKDEASQQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 265

Query: 126 FVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 185
                        LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP
Sbjct: 266 -------------LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 325

Query: 186 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 245
           FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG
Sbjct: 326 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 385

Query: 246 YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 305
           YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC
Sbjct: 386 YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 445

Query: 306 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 351
           ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG
Sbjct: 446 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 491

[Close]

BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
Match: A0A0K9QCR0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_193840 PE=4 SV=1)

HSP 1 Score: 563.1 bits (1450), Expect = 2.400e-157
Identity = 308/359 (85.79%), Postives = 314/359 (87.47%), Query Frame = 1

		  
Query: 6   QLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIMG 65
           +L GMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPST        H+  
Sbjct: 146 ELSGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTVTDCKHEFHLHC 205

Query: 66  IVLVEIKENYCD------------PEQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 125
           I+    + + C              +QLLESVEHERSLRANRSRNRTSFYHPSLENLEVH
Sbjct: 206 ILEWCHRSSNCPMCWRPISLKDEASQQLLESVEHERSLRANRSRNRTSFYHPSLENLEVH 265

Query: 126 FVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 185
                        LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP
Sbjct: 266 -------------LPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHP 325

Query: 186 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 245
           FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG
Sbjct: 326 FFVFSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEG 385

Query: 246 YAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 305
           YAHRIRSNFASANRQSVLSETR LGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC
Sbjct: 386 YAHRIRSNFASANRQSVLSETR-LGSQSFMRSQNTAEQSELQSESLRSRFNSWSMRYKEC 445

Query: 306 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 351
           ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG
Sbjct: 446 ISRNTRGWKERLFARSTSMAELGTEVRREVNSGIARMMERLDSRMNNGSDRASQSSHAG 490

[Close]

BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
Match: B9IIH4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0016s06670g PE=4 SV=2)

HSP 1 Score: 221.5 bits (563), Expect = 1.700e-54
Identity = 157/369 (42.55%), Postives = 214/369 (57.99%), Query Frame = 1

		  
Query: 5   MQLYGMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIM 64
           M++  MD  ++   H T+   F+EG +Q +CDDACSICLE+F ESDPST        H+ 
Sbjct: 1   MEVLEMDEAKKPEVHMTSAAAFVEGGIQDSCDDACSICLEEFCESDPSTVTNCKHEFHLQ 60

Query: 65  GIVLVEIKENYC----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEV 124
            I+    + + C          DP  ++L E+VE ER +RA  SRN T F+HP+L + E+
Sbjct: 61  CILEWCQRSSECPMCLQSISLKDPTSQELFEAVERERKIRAAPSRNATIFHHPTLGDFEL 120

Query: 125 HFVLYHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHH 184
                         LP  V + +LEE I QHLAAAAAM       RREGQR+ +SS G  
Sbjct: 121 Q------------HLPVGVSDSELEERIIQHLAAAAAMGRTRHFGRREGQRNRTSSHGRP 180

Query: 185 PFFVFSS-SNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQ-- 244
            F VFS+   A   G + +S+  +G E+    VS+ S +    S  D P   +L  P   
Sbjct: 181 HFLVFSTHPGAQPSGHVSSSLTQLGGENEPAPVSVASPSTQLTSVGDEPPQQALQSPSVL 240

Query: 245 TDEGYAHRIRSNFASANRQSVLSETRSLGSQSFMRSQNTAEQSELQ--SESLRSRFNSWS 304
           TD+  +    S    AN Q V    RS  SQS + +Q+ A  SELQ  SESL+SR N+ S
Sbjct: 241 TDQS-SSASGSTAMPANNQGVSFNNRSASSQSSLPNQDRAGPSELQSFSESLKSRLNAVS 300

Query: 305 MRYKECISRNTRGWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSDR 352
           MRYKE ISR+TRGWKERLF+R++SM+++ ++VRREVN+GIA   RMMERL++R + G ++
Sbjct: 301 MRYKESISRSTRGWKERLFSRNSSMSDISSDVRREVNAGIATVSRMMERLETRDDGGDNQ 356

[Close]

BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
Match: W9R7D9_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017147 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.800e-52
Identity = 153/347 (44.09%), Postives = 204/347 (58.79%), Query Frame = 1

		  
Query: 9   GMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFTGLHIMGIVLVE 68
           GM+ +++S  H T+   F+EG +Q ACDDACSICLE F +SDPST            ++E
Sbjct: 121 GMEEIKKSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILE 180

Query: 69  IKENYCDPEQLLESVEHERSLRANRSRNRTSFYHPSLENLEVHFVLYHGNISEHWQLPTD 128
            +E       LLE+VE ERS R N SRN T F+HP+L + E+              LP  
Sbjct: 181 CQE-------LLEAVERERSFRFNPSRNATIFHHPTLGDFELQ------------HLPVG 240

Query: 129 VGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFVFSSS-NALHDGSIL 188
             + +LEE I QHLAAAAAM     + RREGQR+ +S+ G   F VFS+  NA       
Sbjct: 241 ASDAELEERIIQHLAAAAAMGRARHISRREGQRNRASAQGRPQFLVFSTHPNAPSATPAS 300

Query: 189 NSMNPVGDESHSPS--VSLGSATILSRSSSDAPVPVSLPPPQTDEGYAHRIRSNFASANR 248
           +S +  G+    P+  V+L   +     SS      SLP  Q +   A    S+  +  +
Sbjct: 301 SSPDQSGEAEPIPAITVALPYPSNAGEESSQQTASSSLPSSQAEPVSASASGSSVVANQQ 360

Query: 249 QSVLSETRSLGSQSFMRSQNTAEQSELQS--ESLRSRFNSWSMRYKECISRNTRGWKERL 308
            S LS  RS  SQS   SQ+ A  S+ QS  ESL+SRFN+ SMRYKE IS++TRGWKERL
Sbjct: 361 GSSLSNRRS-SSQSSPSSQDRAGPSDFQSFSESLKSRFNAVSMRYKESISKSTRGWKERL 420

Query: 309 FARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSDRASQSS 348
           F+R+TSM++LG+EV+REVN+GIA   RMMERL++R N+ +  AS S+
Sbjct: 421 FSRNTSMSDLGSEVKREVNAGIATVSRMMERLETRDNSRTSDASVSN 447

[Close]

BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
Match: A0A0B2RPT0_GLYSO (E3 ubiquitin-protein ligase RHF2A OS=Glycine soja GN=glysoja_001247 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.800e-51
Identity = 147/360 (40.83%), Postives = 207/360 (57.50%), Query Frame = 1

		  
Query: 15  ESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPSTTLFT--GLHIMGIVLVEIKEN 74
           +S  H T+   F+EG +Q ACDDACSICLE F +SDPST        H+  I+    + +
Sbjct: 17  KSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSS 76

Query: 75  YC----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEVHFVLYHGNIS 134
            C          DP  ++LLE+VE ER+ R N SRN T F+HP+L + E+          
Sbjct: 77  QCPMCWQPISLKDPTSQELLEAVERERNFRFNPSRNATIFHHPTLGDFELQ--------- 136

Query: 135 EHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFVFSS-SN 194
               LP    + DLEE I QHLAAAAAM     V RREGQR+ SS+ G   F VFS+  N
Sbjct: 137 ---HLPVGASDADLEERIIQHLAAAAAMGRARHVARREGQRNRSSAQGRQHFLVFSTHPN 196

Query: 195 ALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEGYAHRIRSN 254
           +       +S +  GD+  +P++ + + +    +  ++  P  +PP Q ++  A    + 
Sbjct: 197 SPPMAPASSSPSQRGDDEPTPTIDVANLSPTPATGEESSQPTLVPPVQAEQVSASGSGTT 256

Query: 255 FASANRQSVLSETRSLGSQSFMRSQNTAEQSELQ--SESLRSRFNSWSMRYKECISRNTR 314
             + + Q      R   +QS   SQ+ A  SELQ  SESL+S+ N+ S RYKE IS++TR
Sbjct: 257 ALATDHQGSSYNNRRSPNQSSPSSQDRAGPSELQSFSESLKSKLNAVSTRYKESISKSTR 316

Query: 315 GWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSDRASQSSHAGDGNL 355
           GWKER F+R+ +M++LG+EVRREVN+GIA   RMMERL++R NN S+  S  S+  DG++
Sbjct: 317 GWKERWFSRNNTMSDLGSEVRREVNAGIATVSRMMERLETRDNNRSNSNSAPSNIEDGSV 364

[Close]

BLAST of Spo16799.1 vs. ExPASy Swiss-Prot
Match: RHF2A_ARATH (E3 ubiquitin-protein ligase RHF2A OS=Arabidopsis thaliana GN=RHF2A PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.500e-46
Identity = 151/362 (41.71%), Postives = 196/362 (54.14%), Query Frame = 1

		  
Query: 9   GMDTVRESYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPS--TTLFTGLHIMGIVL 68
           G      S  H T+   F+EG +Q ACDDACSICLE F ESDPS  T+     H+  I+ 
Sbjct: 3   GAGETTTSEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILE 62

Query: 69  VEIKENYC----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEVHFVL 128
              + + C          DP  ++LLE+VE ER+ R N +RN T F HP+L + E+    
Sbjct: 63  WCQRSSQCPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQ--- 122

Query: 129 YHGNISEHWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFV 188
                     LP  V   ++EE I QHLAAAAAM       RREG RS SSS GH  F V
Sbjct: 123 ---------HLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMV 182

Query: 189 FSSSNALHDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEGYAH 248
           FSS          N+ +P     H P  S  S     R  SD     +LP     EG +H
Sbjct: 183 FSSQP--------NASSP---PPHPPMPSSPS----QRDESD--TVSNLPHNALGEG-SH 242

Query: 249 RIRSNFASANRQSVLSETRSLG-----SQSFMRSQNTAEQSELQ--SESLRSRFNSWSMR 308
           +  +   +++    +S + S       +QS    Q+ A  SELQ  SESL+SR N+ S R
Sbjct: 243 QSNTQPPTSSHPRQVSPSASDSNSRPLNQSSPSEQDRAGPSELQSFSESLKSRLNAVSTR 302

Query: 309 YKECISRNTRGWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSDRAS 347
           YKE IS+NTR WK+RLF+R+TSMA+LG+EV+REV++GIA   RMMERL++R N+    AS
Sbjct: 303 YKESISKNTRNWKDRLFSRNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTAS 334

[Close]

BLAST of Spo16799.1 vs. ExPASy Swiss-Prot
Match: RHF1A_ARATH (E3 ubiquitin-protein ligase RHF1A OS=Arabidopsis thaliana GN=RHF1A PE=1 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.100e-12
Identity = 108/336 (32.14%), Postives = 160/336 (47.62%), Query Frame = 1

		  
Query: 36  DDACSICLEDFSESDPSTTLFT--GLHIMGIVLVEIKENYC----------DP--EQLLE 95
           DDACSICLE F+  DPST        H+  I+    +   C          DP  ++LL 
Sbjct: 43  DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDPASQELLA 102

Query: 96  SVEHERSLRANRSRNRTSFYHPSLENLEVHFVLYHGNISEHWQLPTDVGEVDLEEHIFQH 155
           +VE ER L   ++RN +S    S+ +    F   H    E  Q  +       +E   +H
Sbjct: 103 AVEKERLL---KTRNISSSSPISIHHSHDDF---HSE-EEESQFSS------FDEQFLRH 162

Query: 156 LAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFVFSSSNALHDGSILNSMNPVGDESHSPS 215
           L  AA  R   L+ RR+GQ S S  S   P  +  +   L +   L++++ V  ++ +P 
Sbjct: 163 LTEAAHRRC--LLRRRDGQISSSLVSSSDPTTIHPTD--LVNLYRLSAISHVEHQNSNPC 222

Query: 216 VSLGSATILSRSSSDAPVPVSLPPPQTDEGYAHRIRSNFASANRQSVLSETRSLGSQSFM 275
            S GS T         P PVS        G++    S  A +N  S +S   S    S  
Sbjct: 223 PSPGSMT---------PSPVS--------GHS----SIPADSNNGSRISPGPSPSRSS-- 282

Query: 276 RSQNTAEQSELQSESLRSRFNSWSMRYKECISRNTRGWKERLFARSTSMAELGTEVRREV 335
           +S  + E S L  E+++S+  + S +YKE IS++ +G KE+L AR+ S+ EL   V+RE+
Sbjct: 283 QSPKSPEASSL-PEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSKGVQREM 337

Query: 336 NSGI---ARMMERLD--SRMNNGSDRASQSSHAGDG 353
           N+GI   ARM+ER+D  S+   GS   S S+    G
Sbjct: 343 NAGIAGVARMIERMDFSSKRFGGSAHVSTSTATASG 337

[Close]

BLAST of Spo16799.1 vs. TAIR (Arabidopsis)
Match: AT5G22000.2 (RING-H2 group F2A)

HSP 1 Score: 186.8 bits (473), Expect = 2.400e-47
Identity = 150/355 (42.25%), Postives = 195/355 (54.93%), Query Frame = 1

		  
Query: 16  SYDHSTNIGTFLEGEMQGACDDACSICLEDFSESDPS--TTLFTGLHIMGIVLVEIKENY 75
           S  H T+   F+EG +Q ACDDACSICLE F ESDPS  T+     H+  I+    + + 
Sbjct: 10  SEGHLTSAAAFVEGGIQDACDDACSICLESFCESDPSTLTSCKHEYHLQCILEWCQRSSQ 69

Query: 76  C----------DP--EQLLESVEHERSLRANRSRNRTSFYHPSLENLEVHFVLYHGNISE 135
           C          DP  ++LLE+VE ER+ R N +RN T F HP+L + E+           
Sbjct: 70  CPMCWQSISLKDPTSQELLEAVEQERNFRFNPTRNATIFRHPTLGDFELQ---------- 129

Query: 136 HWQLPTDVGEVDLEEHIFQHLAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFVFSSSNAL 195
              LP  V   ++EE I QHLAAAAAM       RREG RS SSS GH  F VFSS    
Sbjct: 130 --HLPVGVDNAEIEERIIQHLAAAAAMGRARHGVRREGHRSRSSSQGHQQFMVFSSQP-- 189

Query: 196 HDGSILNSMNPVGDESHSPSVSLGSATILSRSSSDAPVPVSLPPPQTDEGYAHRIRSNFA 255
                 N+ +P     H P  S  S     R  SD     +LP     EG +H+  +   
Sbjct: 190 ------NASSP---PPHPPMPSSPS----QRDESD--TVSNLPHNALGEG-SHQSNTQPP 249

Query: 256 SANRQSVLSETRSLG-----SQSFMRSQNTAEQSELQ--SESLRSRFNSWSMRYKECISR 315
           +++    +S + S       +QS    Q+ A  SELQ  SESL+SR N+ S RYKE IS+
Sbjct: 250 TSSHPRQVSPSASDSNSRPLNQSSPSEQDRAGPSELQSFSESLKSRLNAVSTRYKESISK 309

Query: 316 NTRGWKERLFARSTSMAELGTEVRREVNSGIA---RMMERLDSRMNNGSDRASQS 347
           NTR WK+RLF+R+TSMA+LG+EV+REV++GIA   RMMERL++R N+    AS S
Sbjct: 310 NTRNWKDRLFSRNTSMADLGSEVKREVSAGIATVSRMMERLETRENSRPSTASVS 334

[Close]

BLAST of Spo16799.1 vs. TAIR (Arabidopsis)
Match: AT4G14220.1 (RING-H2 group F1A)

HSP 1 Score: 75.9 bits (185), Expect = 6.000e-14
Identity = 108/336 (32.14%), Postives = 160/336 (47.62%), Query Frame = 1

		  
Query: 36  DDACSICLEDFSESDPSTTLFT--GLHIMGIVLVEIKENYC----------DP--EQLLE 95
           DDACSICLE F+  DPST        H+  I+    +   C          DP  ++LL 
Sbjct: 43  DDACSICLEPFTLQDPSTVTSCKHEYHLQCIIEWSQRSKECPICWQLFVLRDPASQELLA 102

Query: 96  SVEHERSLRANRSRNRTSFYHPSLENLEVHFVLYHGNISEHWQLPTDVGEVDLEEHIFQH 155
           +VE ER L   ++RN +S    S+ +    F   H    E  Q  +       +E   +H
Sbjct: 103 AVEKERLL---KTRNISSSSPISIHHSHDDF---HSE-EEESQFSS------FDEQFLRH 162

Query: 156 LAAAAAMRSGHLVFRREGQRSWSSSSGHHPFFVFSSSNALHDGSILNSMNPVGDESHSPS 215
           L  AA  R   L+ RR+GQ S S  S   P  +  +   L +   L++++ V  ++ +P 
Sbjct: 163 LTEAAHRRC--LLRRRDGQISSSLVSSSDPTTIHPTD--LVNLYRLSAISHVEHQNSNPC 222

Query: 216 VSLGSATILSRSSSDAPVPVSLPPPQTDEGYAHRIRSNFASANRQSVLSETRSLGSQSFM 275
            S GS T         P PVS        G++    S  A +N  S +S   S    S  
Sbjct: 223 PSPGSMT---------PSPVS--------GHS----SIPADSNNGSRISPGPSPSRSS-- 282

Query: 276 RSQNTAEQSELQSESLRSRFNSWSMRYKECISRNTRGWKERLFARSTSMAELGTEVRREV 335
           +S  + E S L  E+++S+  + S +YKE IS++ +G KE+L AR+ S+ EL   V+RE+
Sbjct: 283 QSPKSPEASSL-PEAIKSKLAAASAKYKESISKSKQGLKEKLLARNNSVKELSKGVQREM 337

Query: 336 NSGI---ARMMERLD--SRMNNGSDRASQSSHAGDG 353
           N+GI   ARM+ER+D  S+   GS   S S+    G
Sbjct: 343 NAGIAGVARMIERMDFSSKRFGGSAHVSTSTATASG 337

The following BLAST results are available for this feature:

BLAST of Spo16799.1 vs. NCBI nr
BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
BLAST of Spo16799.1 vs. ExPASy Swiss-Prot
BLAST of Spo16799.1 vs. TAIR (Arabidopsis)

BLAST of Spo16799.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
gi\|902146441\|gb\|KNA05058.1\|	6.4e-159	86.0	hypothetical protein SOVF_1938...	[more]
gi\|902146442\|gb\|KNA05059.1\|	3.5e-157	85.7	hypothetical protein SOVF_1938...	[more]
gi\|359481051\|ref\|XP_002270570.2\|	1.0e-55	44.3	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|731398415\|ref\|XP_010653244.1\|	8.6e-55	44.3	PREDICTED: E3 ubiquitin-protei...	[more]
gi\|566209079\|ref\|XP_002322768.2\|	2.5e-54	42.5	hypothetical protein POPTR_001...	[more]

BLAST of Spo16799.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9QED6_SPIOL	4.4e-159	86.0	Uncharacterized protein OS=Spi...	[more]
A0A0K9QCR0_SPIOL	2.4e-157	85.7	Uncharacterized protein OS=Spi...	[more]
B9IIH4_POPTR	1.7e-54	42.5	Uncharacterized protein OS=Pop...	[more]
W9R7D9_9ROSA	2.8e-52	44.0	Uncharacterized protein OS=Mor...	[more]
A0A0B2RPT0_GLYSO	1.8e-51	40.8	E3 ubiquitin-protein ligase RH...	[more]

BLAST of Spo16799.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 2

Position :

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Match Name	E-value	Identity	Description
RHF2A_ARATH	2.5e-46	41.7	E3 ubiquitin-protein ligase RH...	[more]
RHF1A_ARATH	1.1e-12	32.1	E3 ubiquitin-protein ligase RH...	[more]

BLAST of Spo16799.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 2

Position :

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x 1


Match Name	E-value	Identity	Description
AT5G22000.2	2.4e-47	42.2	RING-H2 group F2A	[more]
AT4G14220.1	6.0e-14	32.1	RING-H2 group F1A	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22763	RING ZINC FINGER PROTEIN	coord: 21..175 score: 5.1
None	No IPR available	PANTHER	PTHR22763:SF45	SUBFAMILY NOT NAMED	coord: 21..175 score: 5.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0046373	L-arabinose metabolic process
biological_process	GO:0009117	nucleotide metabolic process
molecular_function	GO:0046556	alpha-L-arabinofuranosidase activity

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo12594	0.66	Barchart \| Table
Spo21302	0.65	Barchart \| Table