Spo00937 (gene) | SpinachBase

Overview


Name	Spo00937
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	zinc knuckle (CCHC-type) family protein
Location	chr6 : 27585590 .. 27592970 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGACGAAAAGCACGGCCCCTCTTCCACCGGAAAAACAGTAGGCGCAAATTAATTCTGGGCGAAGGAGGAAGAAATGAAAAAATAAAGCAGATAACCAAAATCAAGCAACCAAAAGCAAGAACATTAAAAATGTCAACTGAAAGTCGACTAGAAGTTGAAGCACAAATTGCTGCAAATATATCTGAGATTCTAGGGTTTTCGAAATTAGATGCCTTACCAGAACCCATTTTTACAGAGAGATCAAACGCCTTCAATTTCCAGGAAAATATCAATGCTTCAGATTCTGGGACCCAACCTCAATCAATCGTAAGCTTCCATTAATTAATCTATTGCTTTTCTGGTCTTATTTTGGTTGATTTTTATTTTTGTTTTTCTTGTGAAATTGAGATTCAATGTTGGCTGAAACGTTTTAGTTCAGTATCCTGCTGTAGGAATTATTGGTGAATTCCTTTACCATTTTTGGATGATAGTTTTCCGTTGGTTGTTATCCTATCAGTTAATTAGTCTAGTGCCAATTTCGTTGTTTACGGTACTGGCTGTTAACTTGTCTAGAATTGGATTGTGGTACCGATCAATAATGGCCGAAGTAAACTCAATGAAGTAACAACTGGTATTATCACGAAGCATCCATGAACCTTTGAGAGTCTTGGCTGGTTTTAGCATCGTTGAAATAATGGAATTTTGGATATTTGATAAAGCAATGGAAACTCGTTTACACCCTGATGCTAATGGCTAAGCAATTGTTTGGATGTCATATTTGATCGAGCAATGGAAACTCGTTTACAACCCCTTGATTAACCAATTACGGGAAAGTTCCTCTCTTTTTTTTGTGCTGGTTTATGGACTACAGTTCCCTTTTAATTATGCCAGTAGTGTTAACTGTTAAGTAACTTCAAATCATTGTCTTGAGGTTCTTTGACCTCTGTTGACCCATCAACTTGTATTAACCCCTCTGTCTATGGTGATATTAGCACAGTATCAACATGGCTATTAAATCCTTGTTTGCTGTGGGTTAAGTTCCATTTTAGGTTTACTGACTTATCTCATCTCTTGCCTTGCTCCTGCTCTTTTCCACTACCTCAGCCCCACATTATTTTCATGTTTTACACTGTTGCTTTTGGCACGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTGGAGAGAGAATAGCGAAAAGTGTGAGATTTGGGAAGGCATTGGGATATCAATAAATGCAAGTATACGATATGGTTTTTAATGGATGGAGTATTATCATTCCCCTACACTGGTTTGATTAGCTTATACATTGTGTTAGGTTGATGCTTGACATTGTAGAGAAAATTGGAAAAAAAGAAATTGTATTTCCCATGGTTAAAGGCATATTGCCTAGCTAGGTTTTTGTAAGCTCTACTTCATTCATGAATTTAAAGTCATTAATTCATTTGTTTTTGTCCCTAGAAAGCATTTTCTATTATTTCCGCTTTCAATGTGTTGCATTGACTAGCATAAAGCAGTTATTTGCCTCCTTTTAAGTTGTCTTGTGCTTTTTACATTGCCAACAGCAGATTTCTGACATTGTAAGGTTTCCAGGTTAATCTGAGTTTGATATATCAATCGTTGGCCTTTGTTCTACCATCTAAAAGTTAACATTTTTCTTATTGTAGAAAACTGCACACCATTTACTTACTTGAGGGAATTGCCTTAGCTCTGCCAAAATTCTGTTAGGTTATCTTGCCTTATGTTTGTTGAACTTAGTGAGACGTACAAAGCATTCAGTGAGCTGTCTATTTTTGTTTAATTGGAAGAATTCATTGTTAATTAATCTGGTTGATTTATGGGTCACATACGCACATGTGGATGAACCAAATACCTTAGCAGTCTAGTCATATAATTTCAGCCCAAGTAGAAAATTCGGGAATTTAACCGGGCAATACTACAATCTTACAACAAGTTTTTAAGTCTGTTGTTGAGATCTTAAGATGTTATAGGCACACCGAAATCCACTTCAGGTGGTTTGGGCAATTTCAAGTCATTGATTGGTTCGAGAGTGGATGAACCAAAGTTAAGAGTGGTTCGAGAGTCCTGTTTTGGCGTATCATTTGGTGAGTGGATCTAACACTTAAAACACAATTTCCAGATTTTCCTTTTCTAGAGAGGTCACCATTTTTGAAGTGTTAGTATGGAATGGGAACCAGAAGCATAGGAATGTAACCTTTTCAAGACTCCCCAACGATTGGGAAGTAGATTAAGTTTCAAGACGTTTGGAACAGTTTTCTGTTCGGAAGGTCTCTTTGGAGGGGAATGATGAGGTGTTTTGGAGGCAGTGCAAGTGTAAGAGTTGCTTCTTCTCTGCTAAGAGCTTCTGTACCTTCCATGATTTTTTTTCCCCATGGATTTTCCCTGCCTTTGATATTGGAAGAAGAAAGCTTCTCCTAAAGCTTGTTTTATCGCTTGGGCGGCGATCAAAGAGAAGCTCCCAAGTCCGAATTGAGGATGTTCTTAAGAGAAGAAGCTTTTTTATCACTAGTTGTTATCTGTGCCTTAAGGAGGAAGAATTTATTAATCACCTTCTTCTCTTTTACCCTTGAGTTATTTTTCTTTGGCACTTATATTTACCCTTATTTAGAGTCGATCTGCGTCCAACTTTGTTCTGTTGAAGATATTCTTGCTGCCTGAACAAGGACAAAAAAAGTTTGTCTTGCCAAAGTGTTGGTAATATTGTGGCACACTTGGAAGAAAGAAACCAACATATTTTTTTAGGGTTTAGCTTCCACTTTTCAAGGTTTCAAGCTCCAATTTTCGAGGGTTTTGTATAGCTTGATTTGAGTTTTAGCTTCTGAACTTCAATTGTATTGATTTTGCAGATTTCTCTATGATAGCTTGAGGGGATTATCCTTTTGTCCTTACTCCTTAGCTCTCCTTTTGTACATGGGTGACACCCCCTTGGCGTCTTTCTGTTATAATTATATAAGATGCGCCGTTTAAGCTTTTTGATAAAAGTTGTGATAAAGTTAACCAGAACGGAGAGAATTGGTGTAGTTAATGTGTTTGCCGTAGTTACCGGTCTTTCTTTTATAGTTGCATGTGTGGTTGATTTCAAAAATTTCTTGCGCCTGCATTGCCTCCCACACATGTAGGTCTTCTTAGACAATTAATTGTAGCTATTGTTGATGATATTGTTTAAGCGCTTCATAAAAAAGGTGCAATATTTTTATATCAGTTCATTATAATTACAACACATTTGAAACTGGGATCAGGATTATGAAATTCCCTCTTGTTGTGGAACATAACAGTCAGCAGATGTAAATCTGACGGCCTGGCTTGGACCTTTTCAATTCCAGATCCATATTAAGATGAATTGGATTCAGATTATTGGGTCCAACTAAGTCCTAATATCCAGGGAATTTATTCCAATTTAGGTTCAAATAATTTTACCCAAGTTCAAATCTAATAAGTCCAATCCAAAATTGCTGCTGACTTGTTTAGGTCCAAAAACTTTCCCCAAGTAAATCGAAAGCCTACAGTTGGATCAAAGATTGAAAAAAGCGCACATGCATGATTAAATTCAAAGTGATATGTTGGTGAATATTTGAAAACTTTGGACAATTTTTTTGATGTATATTCTTTAATGTTAGATTTAAAGTTTTTTTTTGGCAAATAATAAAACTTTATTAATACCAGAGAGAAATGTTACAAAGCCACCAAGTCCACAAAGCAACAGAAACTTACAACTTAAACGACTAACCAAGTGCAAACCGTATCATGGTCTTGAAGCCCTCCCACCTTCTAGGAAGGGTTGAGGGAAAGAAAAATCATATACTAGCACAAGTGTCACGGTCCGAGTGTTTTGACACCGGATAATGCGGCGCGCTCTTGCCTATGGGGCGGCAAGGGCGCAAGCCTTGTGCGGAAAGTGAATCTCAAGGCTCGGGGCACGAGCGGGTGTCTGCTTTAGAATGAGCACTCTTGCCTGTTGGCGACAAGAGCGAGGGTCGAGGGCCGATCGGGGCGCTTGTGTGCGCACAACAGGCACAAGCGGGACCGACGACGAGAGTGTATCTGTTTTGCGAGGGACTTTGATGGGTCTTGGAAAGCTTAAAAACATGCGACAACACAATATCTATAAAGGCTAACAACAACACAAATGATTAAACAAAGGCAATTTCTGATGAGAGGTATTGGTTCATACCCCTCATAGAGGTTTATTTTGAATTAGCTAAAACTTGCCAATGAACACTGGAATTATAGTAACATAATAATTCTCTCTAAAGCCTAGAAAACTATTAGAAAGATCCTAGAAAGCAATAGAAAAGAGAAATACAAGTAAAGAAAGGTTGGATTCTAACAAGGCTGTAACAACCATAAATCAACCATATCAGCTTTACACCTACAAGCCACCCTAAAAACAATAAGTCTGAAGACAGAAGTGCTATCTAACAATTGATTACAATATCTTTTTTTTTGATTCCTTTGAATCCAAATGGATAGATGGCTTCTGTGAACAACATGCTGTGAAGAATAGCTTTAGTCCCTTTCCTCCTGCAATCCTTATAAGCAGACTCGCTCATAATCGAAGGTTTAGACTTGCCTAGAAACACCAAGCAACTTCAGAAATTTCTCCCATATGTCAGTAGTATAACACTGAAAGAAAAGATGATGAATAATTTCAGGTGCAACCCCACATAGGACACAAACAGGATCAATAGATAACCCCCACTGCAGCAACCTATCTTTTGTCACAAGTTTGTGTTGAGCAGCCATCCAAGTAATAAACACACTTTTTGGACTAGCTGTGTTATTGCATAGTAATCTTTTCCAAGGATCAGTCACAAAATTACCTCTCAGGTGCTTGTAAAGTTTGTACCTTATCTTGATGAACATAAGCTTGAGCAGTGATAACATCATCTAAGACTTCTCTGCTACCTAAAATCTTCTTGAACTTTCATGATAAACCCACATGAATGTTCATATTCCAGATATCTTTCTTCTTAACATAATAAATTTTGTTAGATTTAAGGTTTGTCATTTGTACAATGTGTTTGGAGTCTAAATCAAATCTTTATTTTGTAGAAGCCCATTTAGTAGCTAATTTATGTGGAAGCAGAGTGGATTTTGATCTGCATATGAAATACTTAAAACAGTCACGTAGCTACTTTAACCAAGGAAATATATTTGAAATTGGCAACAGTATCCTAAAACTCCCTCCAGATTGATCTGAAACATAATGTTCACTTCTGATGCTTCAAAGTCTTTTGCATATTTCATGGCGTCAAGCTTGATGAATCTCAACCACAACAAGAGCTGGAGCAACCAGAAGCCTGTGTGGATCCCGCTGCACCAAAATCTATACAACCCAATTCAAAATCAGGCATCATAGAAGAGAATGTTGTCCTTCAAAAGCTTCTTGTAAGTTGAGATAACAAGCTTATTTTATTATTCCATATTGTAGATTGGTAAATTTTTGACTTGCTTAATGAAACTAGCGGAAATGGAGATATTTTGACTACAGAGATGGAAGTTCGTGTATAAAGGCTCATGCAGTCAACTCCCCAGCAAAAACGTTAGGGCCACCGTGCTATGTTTGTGGACAGTTTAAGCATACTGGGAAGAGATGCCCCAAGGTAATGTATTATCTTGCTTTACAGCTATTCAGTTGGTGGTCAGCCTTAAACTCATAATTTATGGCGTATAGCCACTATGTTTATCCTCCCCCCCTAAAAAAAAGCACTATGTGAAAGGTCATTATTCATAACTAGGTTCTTTATTGGATGAATTAGATCTGTAAGGTACTAATACTATGTATTTTGCCTTAAACTTATAATTTATGGCTTTTAACCCTAACCTCCCTCCGCCAAGCACTATGTGAAAGGTCACTTACACTACTCATAACTAGGTATTGAATTAAATGGATCTGTAAGGTCTTAAAAGTAAGTACTTTATTAATGATATTGTCCTAGAAAATGAGTTACTTCAATAATTTTGCTTGAAAGTTTTCTGAACGGAGTTTCACTTCCAGCGCCGTATTTGCTCCACATGCAAAAAAAGAGGCCACATCGCTGTAGATTGTCCAGTGAACAACAAAGAATGTATAATCTGTTTGAGATGTGGGGGATCAGAACATGAGCTTTATGCATGCACTGTTGAGTACTCTCCTGATGATCTAAAGGTGTGTTTGACTGACGGGGCAAAAGTTTTTTTTTCCCCTTATGCGGTTTCCTAGCATTCAATACTACTTTTATTTTTATTTTATGCAAGCAATACTACTTATTTTGACGTGCTCATTACTGAGATTTCCTATTTAATGACAGAACATACAGTGCTATGTTTGCAATGAAGTTGGACACATCTGCTGTGGTAACTATACAGACATAAGCGTAGCGACAGCCTCTTGTTATAATTGTGGGGAAGCTGGGCATTCAGGTTTGGTAAGTAACCTTTCAGTATTTTAGTAGTGTATATATCTTCTGCAAGAGTCCAACTGTGCAAGACATTAAACATATAGTTAACCAAAACTTTAATATGTTCACTTTTTTTTTTATAAAGGAATGCCCAAAGCCGCATCTGGATAAGTCTGGCTCGTTTCCTCCCCCTATATGCTACAAATGTGGAGAGGGTGGCCATGTGGCACGAAGATGCCCAACATGCCCAAAAGATGCCAGGCGACCAGCTTGTCATAAACGTCGAAAGGTAGGTTACTGCTGAATACAGAGTACTACATAAACCGTTTCAAGTTTCTACCACCCTCAAATGGCGGAAATAAGAAAGAGAATTACATAATGATAAGATATTATGCTGTACTCGCCTTTTCTTTCAAAAACAAAACCGGGAGATGATATCTTAAAAATCAGGTAGAAGCATTTACGTCACTTTGACCAAAGTGTTTTCTTGGTTTGATGCTTGCAGGATTCTGAGTTGGATTTGGTAGTGGAAGCAGATGACAACCGAAAAACAGCTAGGAGAAGCAAGACATACAGGCACGGTAGAGTGAAGAAACAAAAGATACGAGGGTTACTAGAGTACACGACGACTGTATAGTACTATAAATTAATTCTGTATGACTGACTGTATGAGCCTGGGGGGTTTCAGTAATTTTTGCAGGTATTGAAATCACTCTTAGGAGTAAGCTTTCATCCTGCAAACTTTGTATTATCTTCTTCTTGCTGTTGTAACATTATTTTTGGTTTAAAAGAGCAGTGAATCAAGTAGTAATTGAGTTAAGAGGGTAAGTTTCTGTGTACAAGTGGTAAAATTATATCCACTTGAAGCACAATCTTTCTCAAGAGCCCACATATGTAAGCATTGAACCAGATAATTAAAACTTGTGGTTGGAAAAGGTTACTTTTTTTTTTCTAGTTCAGCTAGACATTTTGACAAA

mRNA sequence

GGACGAAAAGCACGGCCCCTCTTCCACCGGAAAAACAGTAGGCGCAAATTAATTCTGGGCGAAGGAGGAAGAAATGAAAAAATAAAGCAGATAACCAAAATCAAGCAACCAAAAGCAAGAACATTAAAAATGTCAACTGAAAGTCGACTAGAAGTTGAAGCACAAATTGCTGCAAATATATCTGAGATTCTAGGGTTTTCGAAATTAGATGCCTTACCAGAACCCATTTTTACAGAGAGATCAAACGCCTTCAATTTCCAGGAAAATATCAATGCTTCAGATTCTGGGACCCAACCTCAATCAATCCTTGATGAATCTCAACCACAACAAGAGCTGGAGCAACCAGAAGCCTGTGTGGATCCCGCTGCACCAAAATCTATACAACCCAATTCAAAATCAGGCATCATAGAAGAGAATGTTGTCCTTCAAAAGCTTCTTCGGAAATGGAGATATTTTGACTACAGAGATGGAAGTTCGTGTATAAAGGCTCATGCAGTCAACTCCCCAGCAAAAACGTTAGGGCCACCGTGCTATGTTTGTGGACAGTTTAAGCATACTGGGAAGAGATGCCCCAAGCGCCGTATTTGCTCCACATGCAAAAAAAGAGGCCACATCGCTGTAGATTGTCCAGTGAACAACAAAGAATGTATAATCTGTTTGAGATGTGGGGGATCAGAACATGAGCTTTATGCATGCACTGTTGAGTACTCTCCTGATGATCTAAAGAACATACAGTGCTATGTTTGCAATGAAGTTGGACACATCTGCTGTGGTAACTATACAGACATAAGCGTAGCGACAGCCTCTTGTTATAATTGTGGGGAAGCTGGGCATTCAGGTTTGGAATGCCCAAAGCCGCATCTGGATAAGTCTGGCTCGTTTCCTCCCCCTATATGCTACAAATGTGGAGAGGGTGGCCATGTGGCACGAAGATGCCCAACATGCCCAAAAGATGCCAGGCGACCAGCTTGTCATAAACGTCGAAAGGATTCTGAGTTGGATTTGGTAGTGGAAGCAGATGACAACCGAAAAACAGCTAGGAGAAGCAAGACATACAGGCACGGTAGAGTGAAGAAACAAAAGATACGAGGGTTACTAGAGTACACGACGACTGTATAGTACTATAAATTAATTCTGTATGACTGACTGTATGAGCCTGGGGGGTTTCAGTAATTTTTGCAGGTATTGAAATCACTCTTAGGAGTAAGCTTTCATCCTGCAAACTTTGTATTATCTTCTTCTTGCTGTTGTAACATTATTTTTGGTTTAAAAGAGCAGTGAATCAAGTAGTAATTGAGTTAAGAGGGTAAGTTTCTGTGTACAAGTGGTAAAATTATATCCACTTGAAGCACAATCTTTCTCAAGAGCCCACATATGTAAGCATTGAACCAGATAATTAAAACTTGTGGTTGGAAAAGGTTACTTTTTTTTTTCTAGTTCAGCTAGACATTTTGACAAA

Coding sequence (CDS)

ATGTCAACTGAAAGTCGACTAGAAGTTGAAGCACAAATTGCTGCAAATATATCTGAGATTCTAGGGTTTTCGAAATTAGATGCCTTACCAGAACCCATTTTTACAGAGAGATCAAACGCCTTCAATTTCCAGGAAAATATCAATGCTTCAGATTCTGGGACCCAACCTCAATCAATCCTTGATGAATCTCAACCACAACAAGAGCTGGAGCAACCAGAAGCCTGTGTGGATCCCGCTGCACCAAAATCTATACAACCCAATTCAAAATCAGGCATCATAGAAGAGAATGTTGTCCTTCAAAAGCTTCTTCGGAAATGGAGATATTTTGACTACAGAGATGGAAGTTCGTGTATAAAGGCTCATGCAGTCAACTCCCCAGCAAAAACGTTAGGGCCACCGTGCTATGTTTGTGGACAGTTTAAGCATACTGGGAAGAGATGCCCCAAGCGCCGTATTTGCTCCACATGCAAAAAAAGAGGCCACATCGCTGTAGATTGTCCAGTGAACAACAAAGAATGTATAATCTGTTTGAGATGTGGGGGATCAGAACATGAGCTTTATGCATGCACTGTTGAGTACTCTCCTGATGATCTAAAGAACATACAGTGCTATGTTTGCAATGAAGTTGGACACATCTGCTGTGGTAACTATACAGACATAAGCGTAGCGACAGCCTCTTGTTATAATTGTGGGGAAGCTGGGCATTCAGGTTTGGAATGCCCAAAGCCGCATCTGGATAAGTCTGGCTCGTTTCCTCCCCCTATATGCTACAAATGTGGAGAGGGTGGCCATGTGGCACGAAGATGCCCAACATGCCCAAAAGATGCCAGGCGACCAGCTTGTCATAAACGTCGAAAGGATTCTGAGTTGGATTTGGTAGTGGAAGCAGATGACAACCGAAAAACAGCTAGGAGAAGCAAGACATACAGGCACGGTAGAGTGAAGAAACAAAAGATACGAGGGTTACTAGAGTACACGACGACTGTATAG

Protein sequence

MSTESRLEVEAQIAANISEILGFSKLDALPEPIFTERSNAFNFQENINASDSGTQPQSILDESQPQQELEQPEACVDPAAPKSIQPNSKSGIIEENVVLQKLLRKWRYFDYRDGSSCIKAHAVNSPAKTLGPPCYVCGQFKHTGKRCPKRRICSTCKKRGHIAVDCPVNNKECIICLRCGGSEHELYACTVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCYNCGEAGHSGLECPKPHLDKSGSFPPPICYKCGEGGHVARRCPTCPKDARRPACHKRRKDSELDLVVEADDNRKTARRSKTYRHGRVKKQKIRGLLEYTTTV

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo00937.1	Spo00937.1	mRNA

Homology

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BLAST of Spo00937.1 vs. NCBI nr
Match: gi|902196805|gb|KNA13213.1| (hypothetical protein SOVF_118790 [Spinacia oleracea])

HSP 1 Score: 689.9 bits (1779), Expect = 2.200e-195
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1

		  
Query: 1   MSTESRLEVEAQIAANISEILGFSKLDALPEPIFTERSNAFNFQENINASDSGTQPQSIL 60
           MSTESRLEVEAQIAANISEILGFSKLDALPEPIFTERSNAFNFQENINASDSGTQPQSIL
Sbjct: 1   MSTESRLEVEAQIAANISEILGFSKLDALPEPIFTERSNAFNFQENINASDSGTQPQSIL 60

Query: 61  DESQPQQELEQPEACVDPAAPKSIQPNSKSGIIEENVVLQKLLRKWRYFDYRDGSSCIKA 120
           DESQPQQELEQPEACVDPAAPKSIQPNSKSGIIEENVVLQKLLRKWRYFDYRDGSSCIKA
Sbjct: 61  DESQPQQELEQPEACVDPAAPKSIQPNSKSGIIEENVVLQKLLRKWRYFDYRDGSSCIKA 120

Query: 121 HAVNSPAKTLGPPCYVCGQFKHTGKRCPKRRICSTCKKRGHIAVDCPVNNKECIICLRCG 180
           HAVNSPAKTLGPPCYVCGQFKHTGKRCPKRRICSTCKKRGHIAVDCPVNNKECIICLRCG
Sbjct: 121 HAVNSPAKTLGPPCYVCGQFKHTGKRCPKRRICSTCKKRGHIAVDCPVNNKECIICLRCG 180

Query: 181 GSEHELYACTVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCYNCGEAGHSGLEC 240
           GSEHELYACTVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCYNCGEAGHSGLEC
Sbjct: 181 GSEHELYACTVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCYNCGEAGHSGLEC 240

Query: 241 PKPHLDKSGSFPPPICYKCGEGGHVARRCPTCPKDARRPACHKRRKDSELDLVVEADDNR 300
           PKPHLDKSGSFPPPICYKCGEGGHVARRCPTCPKDARRPACHKRRKDSELDLVVEADDNR
Sbjct: 241 PKPHLDKSGSFPPPICYKCGEGGHVARRCPTCPKDARRPACHKRRKDSELDLVVEADDNR 300

Query: 301 KTARRSKTYRHGRVKKQKIRGLLEYTTTV 330
           KTARRSKTYRHGRVKKQKIRGLLEYTTTV
Sbjct: 301 KTARRSKTYRHGRVKKQKIRGLLEYTTTV 329

[Close]

BLAST of Spo00937.1 vs. NCBI nr
Match: gi|731333235|ref|XP_010677623.1| (PREDICTED: DNA-binding protein HEXBP-like isoform X1 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 391.3 bits (1004), Expect = 1.600e-105
Identity = 201/302 (66.56%), Postives = 228/302 (75.50%), Query Frame = 1

		  
Query: 31  EPIFTERSNAFNFQENINASDSGTQPQSILDESQPQQELEQPEACVDPAAPKSIQPNSKS 90
           E  +TE+S AF  Q  IN +D+ T PQ+ILDE +PQQEL+Q EA VD    +SIQ +SKS
Sbjct: 5   EADYTEKS-AFYIQNEINTADTITLPQTILDEPEPQQELQQEEAYVDITVLRSIQLDSKS 64

Query: 91  GIIEENVVLQKLLRKWRYFDYRDGSSCIKAHAVNSPAKTLGPPCYVCGQFKHTGKRCPKR 150
            I EEN+VLQKLLR+WRYFDYRDGSS     AVNS  +  G PCYVCGQF+H+GKRCPKR
Sbjct: 65  VITEENLVLQKLLRRWRYFDYRDGSSYKNKRAVNSHVQEFGTPCYVCGQFQHSGKRCPKR 124

Query: 151 RICSTCKKRGHIAVDCPVNNKECIICLRCGGSEHELYACTVEYSPDDLKNIQCYVCNEVG 210
           RICS CK RGHIA DCP+NNKE  ICLRCG + HEL++C ++YS DDLKNI CYVCN+ G
Sbjct: 125 RICSACKSRGHIAKDCPMNNKEGAICLRCGETGHELFSCNIDYSTDDLKNIHCYVCNKQG 184

Query: 211 HICCGNYTDISVATASCYNCGEAGHSGLECPKPHLDKSGSFPPPICYKCGEGGHVARRCP 270
           HI CG+YTDI  ATASCYNCGE+GHSGLECPKP LDK GS PP ICYKCGEG HVAR+  
Sbjct: 185 HIFCGDYTDICPATASCYNCGESGHSGLECPKPLLDKCGSRPPSICYKCGEGDHVARK-- 244

Query: 271 TCPKDARRPACHKRRKDSELDLVVE---ADDNRKTARRSKTYRHGRVKKQKIRGLLEYTT 330
            C KD    AC KRR+ S  DL  E   A +N K ARRSKT RH RV KQK+R LLEY T
Sbjct: 245 -CTKDVDFSACRKRRQASGSDLGAEEAAAYENPKRARRSKTNRHNRV-KQKMRRLLEYMT 301

[Close]

BLAST of Spo00937.1 vs. NCBI nr
Match: gi|731333237|ref|XP_010677624.1| (PREDICTED: uncharacterized protein LOC104893221 isoform X2 [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 295.8 bits (756), Expect = 9.200e-77
Identity = 141/208 (67.79%), Postives = 164/208 (78.85%), Query Frame = 1

		  
Query: 31  EPIFTERSNAFNFQENINASDSGTQPQSILDESQPQQELEQPEACVDPAAPKSIQPNSKS 90
           E  +TE+S AF  Q  IN +D+ T PQ+ILDE +PQQEL+Q EA VD    +SIQ +SKS
Sbjct: 5   EADYTEKS-AFYIQNEINTADTITLPQTILDEPEPQQELQQEEAYVDITVLRSIQLDSKS 64

Query: 91  GIIEENVVLQKLLRKWRYFDYRDGSSCIKAHAVNSPAKTLGPPCYVCGQFKHTGKRCPKR 150
            I EEN+VLQKLLR+WRYFDYRDGSS     AVNS  +  G PCYVCGQF+H+GKRCPKR
Sbjct: 65  VITEENLVLQKLLRRWRYFDYRDGSSYKNKRAVNSHVQEFGTPCYVCGQFQHSGKRCPKR 124

Query: 151 RICSTCKKRGHIAVDCPVNNKECIICLRCGGSEHELYACTVEYSPDDLKNIQCYVCNEVG 210
           RICS CK RGHIA DCP+NNKE  ICLRCG + HEL++C ++YS DDLKNI CYVCN+ G
Sbjct: 125 RICSACKSRGHIAKDCPMNNKEGAICLRCGETGHELFSCNIDYSTDDLKNIHCYVCNKQG 184

Query: 211 HICCGNYTDISVATASCYNCGEAGHSGL 239
           HI CG+YTDI  ATASCYNCGE+GHSGL
Sbjct: 185 HIFCGDYTDICPATASCYNCGESGHSGL 211

[Close]

BLAST of Spo00937.1 vs. NCBI nr
Match: gi|672109391|ref|XP_008789899.1| (PREDICTED: LOW QUALITY PROTEIN: zinc finger CCHC domain-containing protein 7-like [Phoenix dactylifera])

HSP 1 Score: 193.4 bits (490), Expect = 6.400e-46
Identity = 100/249 (40.16%), Postives = 134/249 (53.82%), Query Frame = 1

		  
Query: 47  INASDSGTQPQSILDESQPQQELEQPEACVDPAAPKSIQPNSKSGIIEE------NVVLQ 106
           + AS  G + +    + + + E ++ E  V PA  +     +    + E      NVVL+
Sbjct: 95  VEASAEGEKKKKRRRKKRKKNEADENERVVVPAKEEEEPLETADLAVTEVNETSDNVVLR 154

Query: 107 KLLRKWRYFDYRDGS--SCIKAH-----AVNSPAKTLGPPCYVCGQFKHTGKRCPKRRIC 166
           KLLR  RYFD  D +  +C         A N   +    PC+VCG F H GK+C + + C
Sbjct: 155 KLLRGPRYFDPGDSNWETCFNCGEEGHVAANCMMEKRQRPCFVCGMFGHNGKQCTQAQDC 214

Query: 167 STCKKRGHIAVDCPVNNKECI----ICLRCGGSEHELYACTVEYSPDDLKNIQCYVCNEV 226
             CK+RGH+A DCP  +K       ICLRCG   H++  C  EY PDDLK IQCY+C + 
Sbjct: 215 FVCKRRGHLAKDCPEKHKRIAQXTKICLRCGDVGHDMLLCRNEYPPDDLKEIQCYICKKY 274

Query: 227 GHICCGNYTDISVATASCYNCGEAGHSGLECPKPHLDKSGSFPPPICYKCGEGGHVARRC 279
           GH+CC ++TDI     SCYNC + GH+GL C KP  +   +  P +CYKCGE GH AR C
Sbjct: 275 GHLCCADFTDIGPREVSCYNCAQLGHTGLGCAKPRGETGAAASPTLCYKCGEEGHFARGC 334

[Close]

BLAST of Spo00937.1 vs. NCBI nr
Match: gi|743775020|ref|XP_010917883.1| (PREDICTED: zinc finger CCHC domain-containing protein 7-like [Elaeis guineensis])

HSP 1 Score: 193.0 bits (489), Expect = 8.400e-46
Identity = 108/281 (38.43%), Postives = 147/281 (52.31%), Query Frame = 1

		  
Query: 67  QELEQPEACVDPAAPKSIQPNSKSGIIEE------NVVLQKLLRKWRYFDYRDGS--SCI 126
           +E+E P+  VDPA  +     S   ++ E      NVVL+KLLR  RYFD  D +  +C 
Sbjct: 118 EEIETPQV-VDPAKEEEEPLGSADLVVAEVNETSDNVVLRKLLRGPRYFDPGDSNWETCF 177

Query: 127 KAH-----AVNSPAKTLGPPCYVCGQFKHTGKRCPKRRICSTCKKRGHIAVDCPVNNK-- 186
                   A N   +    PC+VCG F H GK+C + + C  CK+RGH A DCP  +K  
Sbjct: 178 NCGQEGHVAANCTMEKRRKPCFVCGMFGHNGKQCTQAQDCFVCKRRGHFAKDCPEKHKRI 237

Query: 187 --ECIICLRCGGSEHELYACTVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCYN 246
             E  ICLRCG   H++ +C  +YSP DLK IQCY+C + GH+CC ++TD      SCYN
Sbjct: 238 SHESKICLRCGDIGHDMISCRNDYSPGDLKEIQCYICKKYGHLCCVDFTDNGPREVSCYN 297

Query: 247 CGEAGHSGLECPKPHLDKSGSFPPPICYKCGEGGHVARRCPTCPKDARRPACHKRRKDSE 306
           C + GH+GL C +P  +   +  P +CYKCGE GH AR C      ARR           
Sbjct: 298 CAQLGHTGLGCARPRGETGAAASPTLCYKCGEEGHFARGCTKISMSARR----------- 357

Query: 307 LDLVVEADDNRKTARRSKTY------RHGRVKKQKIRGLLE 325
              + E+   RK A+ +K +       HG    +K + LL+
Sbjct: 358 ---MGESTPTRKVAKENKDFLGTRSAPHGFANLRKKKSLLD 383

[Close]

BLAST of Spo00937.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R125_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_118790 PE=4 SV=1)

HSP 1 Score: 689.9 bits (1779), Expect = 1.500e-195
Identity = 329/329 (100.00%), Postives = 329/329 (100.00%), Query Frame = 1

		  
Query: 1   MSTESRLEVEAQIAANISEILGFSKLDALPEPIFTERSNAFNFQENINASDSGTQPQSIL 60
           MSTESRLEVEAQIAANISEILGFSKLDALPEPIFTERSNAFNFQENINASDSGTQPQSIL
Sbjct: 1   MSTESRLEVEAQIAANISEILGFSKLDALPEPIFTERSNAFNFQENINASDSGTQPQSIL 60

Query: 61  DESQPQQELEQPEACVDPAAPKSIQPNSKSGIIEENVVLQKLLRKWRYFDYRDGSSCIKA 120
           DESQPQQELEQPEACVDPAAPKSIQPNSKSGIIEENVVLQKLLRKWRYFDYRDGSSCIKA
Sbjct: 61  DESQPQQELEQPEACVDPAAPKSIQPNSKSGIIEENVVLQKLLRKWRYFDYRDGSSCIKA 120

Query: 121 HAVNSPAKTLGPPCYVCGQFKHTGKRCPKRRICSTCKKRGHIAVDCPVNNKECIICLRCG 180
           HAVNSPAKTLGPPCYVCGQFKHTGKRCPKRRICSTCKKRGHIAVDCPVNNKECIICLRCG
Sbjct: 121 HAVNSPAKTLGPPCYVCGQFKHTGKRCPKRRICSTCKKRGHIAVDCPVNNKECIICLRCG 180

Query: 181 GSEHELYACTVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCYNCGEAGHSGLEC 240
           GSEHELYACTVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCYNCGEAGHSGLEC
Sbjct: 181 GSEHELYACTVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCYNCGEAGHSGLEC 240

Query: 241 PKPHLDKSGSFPPPICYKCGEGGHVARRCPTCPKDARRPACHKRRKDSELDLVVEADDNR 300
           PKPHLDKSGSFPPPICYKCGEGGHVARRCPTCPKDARRPACHKRRKDSELDLVVEADDNR
Sbjct: 241 PKPHLDKSGSFPPPICYKCGEGGHVARRCPTCPKDARRPACHKRRKDSELDLVVEADDNR 300

Query: 301 KTARRSKTYRHGRVKKQKIRGLLEYTTTV 330
           KTARRSKTYRHGRVKKQKIRGLLEYTTTV
Sbjct: 301 KTARRSKTYRHGRVKKQKIRGLLEYTTTV 329

[Close]

BLAST of Spo00937.1 vs. UniProtKB/TrEMBL
Match: A0A0J8CHT9_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g109370 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.100e-105
Identity = 201/302 (66.56%), Postives = 228/302 (75.50%), Query Frame = 1

		  
Query: 31  EPIFTERSNAFNFQENINASDSGTQPQSILDESQPQQELEQPEACVDPAAPKSIQPNSKS 90
           E  +TE+S AF  Q  IN +D+ T PQ+ILDE +PQQEL+Q EA VD    +SIQ +SKS
Sbjct: 5   EADYTEKS-AFYIQNEINTADTITLPQTILDEPEPQQELQQEEAYVDITVLRSIQLDSKS 64

Query: 91  GIIEENVVLQKLLRKWRYFDYRDGSSCIKAHAVNSPAKTLGPPCYVCGQFKHTGKRCPKR 150
            I EEN+VLQKLLR+WRYFDYRDGSS     AVNS  +  G PCYVCGQF+H+GKRCPKR
Sbjct: 65  VITEENLVLQKLLRRWRYFDYRDGSSYKNKRAVNSHVQEFGTPCYVCGQFQHSGKRCPKR 124

Query: 151 RICSTCKKRGHIAVDCPVNNKECIICLRCGGSEHELYACTVEYSPDDLKNIQCYVCNEVG 210
           RICS CK RGHIA DCP+NNKE  ICLRCG + HEL++C ++YS DDLKNI CYVCN+ G
Sbjct: 125 RICSACKSRGHIAKDCPMNNKEGAICLRCGETGHELFSCNIDYSTDDLKNIHCYVCNKQG 184

Query: 211 HICCGNYTDISVATASCYNCGEAGHSGLECPKPHLDKSGSFPPPICYKCGEGGHVARRCP 270
           HI CG+YTDI  ATASCYNCGE+GHSGLECPKP LDK GS PP ICYKCGEG HVAR+  
Sbjct: 185 HIFCGDYTDICPATASCYNCGESGHSGLECPKPLLDKCGSRPPSICYKCGEGDHVARK-- 244

Query: 271 TCPKDARRPACHKRRKDSELDLVVE---ADDNRKTARRSKTYRHGRVKKQKIRGLLEYTT 330
            C KD    AC KRR+ S  DL  E   A +N K ARRSKT RH RV KQK+R LLEY T
Sbjct: 245 -CTKDVDFSACRKRRQASGSDLGAEEAAAYENPKRARRSKTNRHNRV-KQKMRRLLEYMT 301

[Close]

BLAST of Spo00937.1 vs. UniProtKB/TrEMBL
Match: T1MMK4_TRIUA (Uncharacterized protein OS=Triticum urartu PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 9.400e-44
Identity = 89/216 (41.20%), Postives = 124/216 (57.41%), Query Frame = 1

		  
Query: 87  NSKSGIIEENVVLQKLLRKWRYFDYRDG--SSCIKAH-----AVNSPAKTLGPPCYVCGQ 146
           N     + +N VL+KLLR  RYFD  +    +C         AVN P +    PC+VCG 
Sbjct: 49  NGVDAPVSDNTVLRKLLRIPRYFDPGETILETCFNCGEEGHVAVNCPMEKRKKPCFVCGL 108

Query: 147 FKHTGKRCPKRRICSTCKKRGHIAVDCPVNNKE-----CIICLRCGGSEHELYACTVEYS 206
           F H  K+C + + C  CKK GH+A DCP  + +       +CLRCG + H+++ C+ +Y 
Sbjct: 109 FGHNAKQCTQGQECFICKKGGHMAKDCPDKHTKNTQQYTTLCLRCGETGHDMFGCSNDYP 168

Query: 207 PDDLKNIQCYVCNEVGHICCGNYTDISVATASCYNCGEAGHSGLECPKPHLDKSGSFPPP 266
           PDD+K I+CYVCN+ GH+CC +++D      +CYNC ++GH+GL C K   + S +  P 
Sbjct: 169 PDDVKEIKCYVCNQNGHLCCTDFSDSCSKEVTCYNCAQSGHTGLGCAKQRRETSVATTPT 228

Query: 267 ICYKCGEGGHVARRCPTCPKDAR---RPACHKRRKD 288
           +CYKCGE GH AR C    K  R     + H RRKD
Sbjct: 229 LCYKCGEDGHFARGCTNSAKPGRFKGELSSHSRRKD 264

[Close]

BLAST of Spo00937.1 vs. UniProtKB/TrEMBL
Match: A0A061F6F6_THECC (Zinc knuckle family protein, putative OS=Theobroma cacao GN=TCM_025475 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.200e-43
Identity = 108/285 (37.89%), Postives = 152/285 (53.33%), Query Frame = 1

		  
Query: 1   MSTESRLEVEAQIAANISEILGFSKLDALPEPIFTERSNAFNFQENINASDSGTQPQSIL 60
           +++ S  E EA +A   S +   +  D       T +       E +  ++ G + + I 
Sbjct: 77  LTSSSSEEGEADVAGT-SGVAEEADFDLKVNKTVTIKKKKKTKSEKVIITEDGDKAEMI- 136

Query: 61  DESQPQQELEQPEACVDPAAPKSIQPNSKSGIIEENVVLQKLLRKWRYFDYRDGS--SCI 120
           ++++  +E E  +A       +S+ PN+    I +N+VL+KLLR  RYFD  D S  +C 
Sbjct: 137 EKAETVEEAEMAKAA---ETIESVDPNTVD--ISDNIVLRKLLRGPRYFDPPDSSWQTCF 196

Query: 121 KAH-----AVN-SPAKTLGPPCYVCGQFKHTGKRCPKRRICSTCKKRGHIAVDCPVNNKE 180
                   AVN + A     PC+VCG   H  ++C K + C  CKK GH A DCP  +K 
Sbjct: 197 NCGEEGHMAVNCTSASKRKKPCFVCGSLDHGARQCSKAQDCFICKKSGHRAKDCPDKHKS 256

Query: 181 CI----ICLRCGGSEHELYACTVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCY 240
                 ICLRCG S H++++C  +YS  DLK IQCY+C   GH+CC N+ D S +  SCY
Sbjct: 257 GSKNGKICLRCGDSGHDMFSCWKDYSHGDLKEIQCYICKNFGHLCCVNFVDTSASEVSCY 316

Query: 241 NCGEAGHSGLECPKPHLD---KSGSFPPPICYKCGEGGHVARRCP 271
            CG+ GH+GL C K   D    + +  P ICYKCGEGGH AR CP
Sbjct: 317 RCGQLGHTGLSCGKSRGDTKETTDNASPSICYKCGEGGHFARECP 354

[Close]

BLAST of Spo00937.1 vs. UniProtKB/TrEMBL
Match: W5H7S9_WHEAT (Uncharacterized protein OS=Triticum aestivum PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.600e-43
Identity = 89/216 (41.20%), Postives = 124/216 (57.41%), Query Frame = 1

		  
Query: 87  NSKSGIIEENVVLQKLLRKWRYFDYRDG--SSCIKAH-----AVNSPAKTLGPPCYVCGQ 146
           N     + +N VL+KLLR  RYFD  +    +C         AVN P +    PC+VCG 
Sbjct: 45  NGVDAPVSDNTVLRKLLRIPRYFDPGETILETCFNCGEEGHVAVNCPMEKRKKPCFVCGL 104

Query: 147 FKHTGKRCPKRRICSTCKKRGHIAVDCPVNNKE-----CIICLRCGGSEHELYACTVEYS 206
           F H  K+C + + C  CKK GH+A DCP  + +       +CLRCG + H+++ C+ +Y 
Sbjct: 105 FGHNAKQCTQGQECFICKKGGHMAKDCPDKHTKNTQQYTTLCLRCGETGHDMFGCSNDYP 164

Query: 207 PDDLKNIQCYVCNEVGHICCGNYTDISVATASCYNCGEAGHSGLECPKPHLDKSGSFPPP 266
           PDD+K I+CYVCN+ GH+CC +++D      +CYNC ++GH+GL C K   + S +  P 
Sbjct: 165 PDDVKEIKCYVCNQNGHLCCTDFSDSCSKEVTCYNCAQSGHTGLGCAKQRRETSVATTPT 224

Query: 267 ICYKCGEGGHVARRCPTCPKDAR---RPACHKRRKD 288
           +CYKCGE GH AR C    K  R     + H RRKD
Sbjct: 225 LCYKCGEDGHFARGCTNSAKPGRFKGELSSHGRRKD 260

[Close]

BLAST of Spo00937.1 vs. ExPASy Swiss-Prot
Match: GIS2_YEAST (Zinc finger protein GIS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GIS2 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 3.100e-16
Identity = 46/140 (32.86%), Postives = 61/140 (43.57%), Query Frame = 1

		  
Query: 134 CYVCGQFKHTGKRCPKRRICSTCKKRGHIAVDCPV-NNKECIICLRCGGSEHELYACTVE 193
           CYVCG+  H  + C   R+C  C K GH+  DC +    E   C  CG + H    CTV+
Sbjct: 6   CYVCGKIGHLAEDCDSERLCYNCNKPGHVQTDCTMPRTVEFKQCYNCGETGHVRSECTVQ 65

Query: 194 YSPDDLKNIQCYVCNEVGHI---CCGNYTDISVATASCYNCGEAGHSGLECPKPHLDKSG 253
                    +C+ CN+ GHI   C         +  SCY CG   H   +C      K  
Sbjct: 66  ---------RCFNCNQTGHISRECPEPKKTSRFSKVSCYKCGGPNHMAKDCM-----KED 125

Query: 254 SFPPPICYKCGEGGHVARRC 270
                 CY CG+ GH++R C
Sbjct: 126 GISGLKCYTCGQAGHMSRDC 131

[Close]

BLAST of Spo00937.1 vs. ExPASy Swiss-Prot
Match: HEXP_LEIMA (DNA-binding protein HEXBP OS=Leishmania major GN=HEXBP PE=3 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 6.900e-16
Identity = 51/179 (28.49%), Postives = 72/179 (40.22%), Query Frame = 1

		  
Query: 123 VNSPAKTLGPPCYVCGQFKHTGKRCP--------KRRICSTCKKRGHIAVDCPVNNKE-- 182
           V  P       C  CG+  H  + CP        +   C  C + GH++ +CP   +   
Sbjct: 7   VKRPRTESSTSCRNCGKEGHYARECPEADSKGDERSTTCFRCGEEGHMSRECPNEARSGA 66

Query: 183 --CIICLRCGGSEHELYACTVEYSPDDLKNIQCYVCNEVGHIC--C--------GNYTDI 242
              + C RCG + H    C     P   K  +CY C + GH+   C        G Y   
Sbjct: 67  AGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCPSSQGGSRGGYGQK 126

Query: 243 SVATAS---------CYNCGEAGHSGLECPKPHLDKSGSFPPPICYKCGEGGHVARRCP 271
              + +         CY CG+AGH   +CP      SG+     CYKCG+ GH++R CP
Sbjct: 127 RGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGA-GDRTCYKCGDAGHISRDCP 184

[Close]

BLAST of Spo00937.1 vs. ExPASy Swiss-Prot
Match: CNBP_CHICK (Cellular nucleic acid-binding protein OS=Gallus gallus GN=CNBP PE=2 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.500e-15
Identity = 49/141 (34.75%), Postives = 58/141 (41.13%), Query Frame = 1

		  
Query: 134 CYVCGQFKHTGKRCPKR--RICSTCKKRGHIAVDCPVNNKE---CIICLRCGGSEHELYA 193
           CY CG+  H  K C  +  + C  C + GHIA DC    +E   C  C  CG   H    
Sbjct: 48  CYRCGESGHLAKDCDLQEDKACYNCGRGGHIAKDCKEPKREREQC--CYNCGKPGHLARD 107

Query: 194 CTVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCYNCGEAGHSGLECPKPHLDKS 253
           C      D     +CY C E GHI              CY CGE GH  + C K      
Sbjct: 108 C------DHADEQKCYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCSKTSEVN- 166

Query: 254 GSFPPPICYKCGEGGHVARRC 270
                  CY+CGE GH+AR C
Sbjct: 168 -------CYRCGESGHLAREC 166

[Close]

BLAST of Spo00937.1 vs. ExPASy Swiss-Prot
Match: CNBP_PONAB (Cellular nucleic acid-binding protein OS=Pongo abelii GN=CNBP PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.900e-15
Identity = 49/140 (35.00%), Postives = 57/140 (40.71%), Query Frame = 1

		  
Query: 134 CYVCGQFKHTGKRCPKRR-ICSTCKKRGHIAVDCPVNNKE---CIICLRCGGSEHELYAC 193
           CY CG+  H  K C  +   C  C + GHIA DC    +E   C  C  CG   H    C
Sbjct: 54  CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQC--CYNCGKPGHLARDC 113

Query: 194 TVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCYNCGEAGHSGLECPKPHLDKSG 253
                 D     +CY C E GHI              CY CGE GH  + C K       
Sbjct: 114 ------DHADEQKCYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCSKTSEVN-- 171

Query: 254 SFPPPICYKCGEGGHVARRC 270
                 CY+CGE GH+AR C
Sbjct: 174 ------CYRCGESGHLAREC 171

[Close]

BLAST of Spo00937.1 vs. ExPASy Swiss-Prot
Match: CNBP_RAT (Cellular nucleic acid-binding protein OS=Rattus norvegicus GN=Cnbp PE=2 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.900e-15
Identity = 49/140 (35.00%), Postives = 57/140 (40.71%), Query Frame = 1

		  
Query: 134 CYVCGQFKHTGKRCPKRR-ICSTCKKRGHIAVDCPVNNKE---CIICLRCGGSEHELYAC 193
           CY CG+  H  K C  +   C  C + GHIA DC    +E   C  C  CG   H    C
Sbjct: 54  CYRCGESGHLAKDCDLQEDACYNCGRGGHIAKDCKEPKREREQC--CYNCGKPGHLARDC 113

Query: 194 TVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCYNCGEAGHSGLECPKPHLDKSG 253
                 D     +CY C E GHI              CY CGE GH  + C K       
Sbjct: 114 ------DHADEQKCYSCGEFGHI------QKDCTKVKCYRCGETGHVAINCSKTSEVN-- 171

Query: 254 SFPPPICYKCGEGGHVARRC 270
                 CY+CGE GH+AR C
Sbjct: 174 ------CYRCGESGHLAREC 171

[Close]

BLAST of Spo00937.1 vs. TAIR (Arabidopsis)
Match: AT3G43590.1 (zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 156.0 bits (393), Expect = 4.000e-38
Identity = 89/233 (38.20%), Postives = 119/233 (51.07%), Query Frame = 1

		  
Query: 61  DESQPQQELEQPEACVDPAAPKSIQPNSKSGIIEENVVLQKLLRKWRYFDYRDGS--SCI 120
           DE +  +E+ + E   D    +S +P ++      N+VL+KLLR  RYFD  D    SC 
Sbjct: 113 DEEKVVEEIVKGEG-EDDEVERSDEPKTEE--TASNLVLKKLLRGARYFDPPDAGWVSCY 172

Query: 121 KAH-----AVNSPAKTLG-PPCYVCGQFKHTGKRCPKRRICSTCKKRGHIAVDCP---VN 180
                   + N P  T    PC++CG  +H  K+C K   C  CKK GH A DCP    N
Sbjct: 173 SCGEQGHTSFNCPTPTKRRKPCFICGSLEHGAKQCSKGHDCYICKKTGHRAKDCPDKYKN 232

Query: 181 NKECIICLRCGGSEHELYACTVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCYN 240
             +  +CLRCG   H++  C  EYS +DLK++QCY+C   GH+CC    +      SCY 
Sbjct: 233 GSKGAVCLRCGDFGHDMILCKYEYSKEDLKDVQCYICKSFGHLCCVEPGNSLSWAVSCYR 292

Query: 241 CGEAGHSGLECPKPHLDKS------------GSFPPPICYKCGEGGHVARRCP 271
           CG+ GHSGL C + H ++S             S     CY+CGE GH AR CP
Sbjct: 293 CGQLGHSGLACGR-HYEESNENDSATPERLFNSREASECYRCGEEGHFARECP 341

[Close]

BLAST of Spo00937.1 vs. TAIR (Arabidopsis)
Match: AT5G36240.1 (zinc knuckle (CCHC-type) family protein)

HSP 1 Score: 110.2 bits (274), Expect = 2.500e-24
Identity = 53/118 (44.92%), Postives = 68/118 (57.63%), Query Frame = 1

		  
Query: 169 NNKECIICLRCGGSEHELYACTVEYSPDDLKNIQCYVCNEVGHICCGNYTDISVATASCY 228
           N+ E  +CLRCGG  H++  C  EYS +DLKNI+CYVCN +GH+CC         T SCY
Sbjct: 21  NDDEAEVCLRCGGFGHDMTLCKYEYSHEDLKNIKCYVCNSLGHLCCIEPGHTQSWTVSCY 80

Query: 229 NCGEAGHSGLECPKPHLDKSGSFPPPICYKCGEGGHVARRC----PTC-PKDARRPAC 282
            CG+ GH+GL C + H D S S   P C+ CG  GH   +C      C P+D+    C
Sbjct: 81  RCGQLGHTGLACGR-HYDDSVS---PSCFICGREGHFEHQCHNSFSVCFPEDSSEDEC 134

[Close]

BLAST of Spo00937.1 vs. TAIR (Arabidopsis)
Match: AT5G52380.1 (VASCULAR-RELATED NAC-DOMAIN 6)

HSP 1 Score: 77.8 bits (190), Expect = 1.400e-14
Identity = 44/142 (30.99%), Postives = 58/142 (40.85%), Query Frame = 1

		  
Query: 112 RDGSSCIKAHAVNSPAKTLGPPCYVCGQFKHTGKRCPKR------RICSTCKKRGHIAVD 171
           R GSS    H +  P    G  C++C    H  K CP++      +IC  C++RGH   +
Sbjct: 56  RTGSST--RHPLRVPGMKPGEGCFICHSKTHIAKLCPEKSEWERNKICLQCRRRGHSLKN 115

Query: 172 CPVNNKECI---ICLRCGGSEHELYACTVEYSPDDLKNIQCYVCNEVGHI---CCGNYTD 231
           CP  N E     +C  CG + H L  C         K   C++C   GHI   C  N   
Sbjct: 116 CPEKNNESSEKKLCYNCGDTGHSLSHCPYPMEDGGTKFASCFICKGQGHISKNCPENKHG 175

Query: 232 ISVATASCYNCGEAGHSGLECP 242
           I      C  CG   H   +CP
Sbjct: 176 IYPMGGCCKVCGSVAHLVKDCP 195

[Close]

BLAST of Spo00937.1 vs. TAIR (Arabidopsis)
Match: AT4G36020.1 (cold shock domain protein 1)

HSP 1 Score: 64.7 bits (156), Expect = 1.200e-10
Identity = 49/168 (29.17%), Postives = 64/168 (38.10%), Query Frame = 1

		  
Query: 131 GPPCYVCGQFKHTGKRCPKRRI-------------CSTCKKRGHIAVDC---PVNNKECI 190
           G  CY CG   H  + C                  C TC   GH+A DC    V N +  
Sbjct: 131 GEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDGCYTCGDVGHVARDCTQKSVGNGDQR 190

Query: 191 I--------CLRCGGSEHELYACTVEYSPDDLKNI-----QCYVCNEVGHICCGNYTDIS 250
                    C  CG   H    CT + +  ++++       CY C  VGHI     T   
Sbjct: 191 GAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARDCATKRQ 250

Query: 251 VATASCYNCGEAGHSGLECPKPHLDKSGSFPPPICYKCGEGGHVARRC 270
             +  CY CG +GH   +C +      G+     CYKCG+ GH AR C
Sbjct: 251 -PSRGCYQCGGSGHLARDCDQRGSGGGGN--DNACYKCGKEGHFAREC 295

[Close]

BLAST of Spo00937.1 vs. TAIR (Arabidopsis)
Match: AT2G17870.1 (cold shock domain protein 3)

HSP 1 Score: 56.6 bits (135), Expect = 3.300e-8
Identity = 43/152 (28.29%), Postives = 58/152 (38.16%), Query Frame = 1

		  
Query: 134 CYVCGQFKHTGKRCPKR------------RICSTCKKRGHIAVDCPVNNKECIICLRCGG 193
           CY+CG   H  + C +             R C +C + GH+A DC           R G 
Sbjct: 132 CYMCGDVGHFARDCRQSGGGNSGGGGGGGRPCYSCGEVGHLAKDC-----------RGGS 191

Query: 194 SEHELYACTVEYSPDDLKNIQCYVCNEVGHI---CCGNYT-DISVATASCYNCGEAGHSG 253
             +         S  D     CY+C  VGH    C  N   ++    ++CY CG  GH  
Sbjct: 192 GGNRYGGGGGRGSGGD----GCYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIA 251

Query: 254 LECPKPHLDKSGSFPPPICYKCGEGGHVARRC 270
             C    +   G      CY+CG  GH+AR C
Sbjct: 252 KVCTSK-IPSGGGGGGRACYECGGTGHLARDC 267

The following BLAST results are available for this feature:

BLAST of Spo00937.1 vs. NCBI nr
BLAST of Spo00937.1 vs. UniProtKB/TrEMBL
BLAST of Spo00937.1 vs. ExPASy Swiss-Prot
BLAST of Spo00937.1 vs. TAIR (Arabidopsis)

BLAST of Spo00937.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5

Position :

Zoom :

x 1


Match Name	E-value	Identity	Description
gi\|902196805\|gb\|KNA13213.1\|	2.2e-195	100.	hypothetical protein SOVF_1187...	[more]
gi\|731333235\|ref\|XP_010677623.1\|	1.6e-105	66.5	PREDICTED: DNA-binding protein...	[more]
gi\|731333237\|ref\|XP_010677624.1\|	9.2e-77	67.7	PREDICTED: uncharacterized pro...	[more]
gi\|672109391\|ref\|XP_008789899.1\|	6.4e-46	40.1	PREDICTED: LOW QUALITY PROTEIN...	[more]
gi\|743775020\|ref\|XP_010917883.1\|	8.4e-46	38.4	PREDICTED: zinc finger CCHC do...	[more]

BLAST of Spo00937.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
A0A0K9R125_SPIOL	1.5e-195	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8CHT9_BETVU	1.1e-105	66.5	Uncharacterized protein OS=Bet...	[more]
T1MMK4_TRIUA	9.4e-44	41.2	Uncharacterized protein OS=Tri...	[more]
A0A061F6F6_THECC	1.2e-43	37.8	Zinc knuckle family protein, p...	[more]
W5H7S9_WHEAT	1.6e-43	41.2	Uncharacterized protein OS=Tri...	[more]

BLAST of Spo00937.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
GIS2_YEAST	3.1e-16	32.8	Zinc finger protein GIS2 OS=Sa...	[more]
HEXP_LEIMA	6.9e-16	28.4	DNA-binding protein HEXBP OS=L...	[more]
CNBP_CHICK	4.5e-15	34.7	Cellular nucleic acid-binding ...	[more]
CNBP_PONAB	5.9e-15	35.0	Cellular nucleic acid-binding ...	[more]
CNBP_RAT	5.9e-15	35.0	Cellular nucleic acid-binding ...	[more]

BLAST of Spo00937.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 5

Position :

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Match Name	E-value	Identity	Description
AT3G43590.1	4.0e-38	38.2	zinc knuckle (CCHC-type) famil...	[more]
AT5G36240.1	2.5e-24	44.9	zinc knuckle (CCHC-type) famil...	[more]
AT5G52380.1	1.4e-14	30.9	VASCULAR-RELATED NAC-DOMAIN 6	[more]
AT4G36020.1	1.2e-10	29.1	cold shock domain protein 1	[more]
AT2G17870.1	3.3e-8	28.2	cold shock domain protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	GENE3D	4.10.60.10		coord: 134..160 score: 6.8E-8coord: 226..271 score: 2.9E-11coord: 161..190 score: 9.
IPR001878	Zinc finger, CCHC-type	PFAM	PF00098	zf-CCHC	coord: 255..270 score: 6.4E-6coord: 152..167 score: 4.4E-4coord: 227..242 score: 4.
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 226..242 score: 0.01coord: 255..271 score: 4.9E-4coord: 133..149 score: 0.098coord: 152..168 score: 0.0073coord: 175..191 score:
IPR001878	Zinc finger, CCHC-type	PROFILE	PS50158	ZF_CCHC	coord: 227..242 score: 10.114coord: 153..167 score: 8.878coord: 256..270 score: 10
IPR001878	Zinc finger, CCHC-type	unknown	SSF57756	Retrovirus zinc finger-like domains	coord: 224..272 score: 1.4E-8coord: 131..170 score: 7.2
None	No IPR available	PANTHER	PTHR23002	ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN	coord: 1..320 score: 1.1
None	No IPR available	PANTHER	PTHR23002:SF69	SUBFAMILY NOT NAMED	coord: 1..320 score: 1.1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006635	fatty acid beta-oxidation
biological_process	GO:0006633	fatty acid biosynthetic process
biological_process	GO:0007031	peroxisome organization
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005778	peroxisomal membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo12363	0.73	Barchart \| Table
Spo25633	0.73	Barchart \| Table
Spo10104	0.72	Barchart \| Table
Spo23125	0.70	Barchart \| Table
Spo21833	0.69	Barchart \| Table
Spo00943	0.69	Barchart \| Table
Spo17038	0.69	Barchart \| Table
Spo01132	0.69	Barchart \| Table
Spo01603	0.68	Barchart \| Table
Spo19936	0.68	Barchart \| Table
Spo10444	0.68	Barchart \| Table
Spo12945	0.68	Barchart \| Table
Spo00398	0.67	Barchart \| Table
Spo06022	0.67	Barchart \| Table
Spo06513	0.67	Barchart \| Table
Spo09220	0.67	Barchart \| Table
Spo13783	0.67	Barchart \| Table
Spo15499	0.67	Barchart \| Table
Spo17333	0.67	Barchart \| Table
Spo22086	0.67	Barchart \| Table
Spo17979	0.66	Barchart \| Table
Spo18605	0.66	Barchart \| Table
Spo18943	0.66	Barchart \| Table
Spo13499	0.66	Barchart \| Table
Spo21566	0.66	Barchart \| Table
Spo21599	0.66	Barchart \| Table
Spo10571	0.66	Barchart \| Table
Spo26640	0.66	Barchart \| Table
Spo23257	0.66	Barchart \| Table
Spo24133	0.66	Barchart \| Table
Spo24430	0.66	Barchart \| Table
Spo04972	0.66	Barchart \| Table
Spo23626	0.65	Barchart \| Table
Spo21674	0.65	Barchart \| Table
Spo25573	0.65	Barchart \| Table
Spo24244	0.65	Barchart \| Table
Spo22998	0.65	Barchart \| Table
Spo09387	0.65	Barchart \| Table
Spo16930	0.65	Barchart \| Table