Spo07720 (gene) | SpinachBase

Overview


Name	Spo07720
Type	gene
Organism	Spinacia oleracea (Spinach)
Description	(ATP synthase D chain, mitochondrial, putative) (3.6.3.14)
Location	chr6 : 28258485 .. 28262523 (-)

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTGAGAGCCATCTTAAAAGTTACTCGAACCACAGCCTTAACCAAGAACCGAAGGAAAGATAAAGAGAGCCGAAAAAAGGGTTTCCCTGGCCCAACAACCACAACATTATCACAGTTGCCAATTGCCATCCCCAATTCCATTTTGCCCCATTTTTGTTGCGAAAAAGTATCAGAGGAGAGAGAAAGAGAGAAAAAATGAGTGGAGTTGTGAAGAAGGTTGCGGATGCGAGCTTCAAGGCTTCGAGGAACATCGATTGGGAAGGCATGGCTAAGCTCCTTGTCTCCGATGAAGCTCGCAAGGAGTTCTTCACCCTTCGTCGCACTTTTGATGAAGTCAACACTCAACTTCAGACCAAGTTTAGCCAGGTCCGATCTTCGATCTCTGTTTGTAAACCCTAATTTTCTCCTTTCCCCCATTTTTGTTTTGTTGTTGATTTATTTTTGCTATTATTGGAGATTTGTGTATTTTGTTTTTGATTAATGGATTTGATTTTCGGGAATGCGTGCGATCTAGAATTTCCTGGAAACCCTCATTATTTATTTGAGACTGCTCCGGATTTAAGACCAAAGTGAGGAGATTTTAAAATTGGTTGGATGATTTTTCGAATCGAATAATTTGATGTAAAACTTTTTCATTGCTTGGTAGGAATTTGAAATGATGATTTTCGGCGAAAGCAGTTTTTGGGTATGCGGAATTGATGGATTGATTTATTAGGGTAATTTACGTCTTCTGCTCTAAAGAAGAACAAATGTGAACCCCATAGTGTTAGAAAATCAATCTATTTGCTGAGGCATAGCTTTTCGCCATAGTCCGATTACATGCTTTCTCTTTCTTCTTCACTTATCCTCCTTCAGACTGACACTTAACAGTTAAGCTGCATTTTGCTTGATGCAAATGTGTTACTTTTTCTTGTGATCGAAAATATTAAAGCACATTTATCGAATTGAGATCATGTGTTGCGGTCATTGAAATATTTATGCTCAAGTTTTAGATGAGGTTTCTTTGAGTTTTTGCATGGATTCTCAATTGCAGATACCATGATAATGTTGTTTTTAAATGTGGGACTATGCAGGAACCTGAGCCCATAGACTGGGAGTATTACAGAAAAGGAATTGGCAACAAAGTGGTTGATATGTACAAGGAAGCTTATGATGGTAAGTTTCTGTATTTCTTGCATTTATGTTTTGTCAGCAACTTTTTATGTCTGGAAGTGAAGAATTTTTAAAATTCTTCTTCGTGCATCGTATTTATGTTTCTATATGTCTGTCAAAACGCTGTTGCTATGAAGAGGTGTTATGTTTTGGTAAACTAAGGAATGTGGACTGTCAATAGAGCCAAATCTTGTATTTGAATTGTGATTTTCCGGATGTAACATGTTATGATCGAATATTTAACACATATTTACCAAATATGTCGACTCAGAGCACAACATTCCAGATTTTTGGCGGCAATAGGGTTTAGTGTATGTGTATGAAGCATTACCTTAGTCTATTGTAAGTCTATGTGAAGTTGCTGGTACTGTTAGAAGCTTGATCGAAATGCATTAAATTAGATGAACAGTTTCGGAAAGACATTCGATGTAATCTTGATTTGAAGTTTAGAAATAGAACAAGCAATAATTTTTTAACTCTTTGAAAAATGGTTGCGATTTCTTGAATCATAATGTATCATAGAGACTAGTTGATTAAGATGGTGATTTCATCATGGAGTTAACACTTTCTTGAACAATTTTTATAGTTCACATTAACTTGTCACCAAATTCAAATGATTGCTTTTGCTTGAGCGATTTAGAAACGATTGCTTTTGAATTGACAAAAGTGCGTTTATTTGGATTGCTTAAATTAGTAATTTAGACAAGCAATTAGGAGAGAGAAATTATTGTATCATCTGCTAGATTTTGTAGTAGTTATATTCTTTGCTTTGGATTAGGAAGAGAACAAGTCTACATCCATTGAGTACTTTGCATACCAATTTGCCAATCATCAGCTGCAACTTTAGATGCCCTTTGCCCTCTTAAATAAATGGTTATGGTTGACTCTGACTTGGGTTATTGGATTGGATGTGAATAGAAACAATTGGAAGTGGATGGAGAGAGAAAGAAAAAAGAAAGTGTTAGGATTGAGATAGAAAAAGGTTTCTTGATGAAGAGAGAGAAGGGGAATTATACCTTAATAGTTAACAATTGATTTTTTTAGAAAGAAATAAGGTTTTTTTTATTGGAATATACAGTATTGTGGAAATTTGTGTTTGGGCAGAGGGATTATACGTATAGCTTCAAGATTCATATTCCCTATCTCTGCGGAGTTTGTCTTAATTATGTGCTGATTTACATATGTGCATTTTCAAGAGCCAAGTTCAGTGTCTCGCTGTGAAGTGTGATTTTCCTAATCTGCAAGCTATGTTGGAGAGTGCTTGTCGGAATTGGTTATCCTGTTTTCTTACGGGAAACAAAAGTCTTATTTTACATCACGAGATTGCTTGTCGGAATGAGTTTTCATGTATTGTTATGGGGAACATTTTCCATCACCAAAGACAGGCGAGGTCTTTGTTTAATGAATCTGTGAATTATGATTACCTTGTGTCTGGAATTTGATTTTTGACATGGAATTGTGTCCTGATGTCCAGTTTCATGATCTAATGTTTAATTCCAACCATTTTTGTCCTGCATGTCATTTAAGCTTTGCTAATATTACACCCAAGTATAATTTTTCTATTCTCTCTCCAGGTGTTGTGGTTCCAAAGTATGTGGACAACGTTACACCAGAGTACAAGCCAAAATTTGAAGCCCTGGTGAGTATTAATGCCTCCTAAACCTTCTAGAGTGCATTGATCTCTAGGTATAGTATTCATCTTTATTAAGCAGGGACATAATTACATAATACAAGTCTTTTTTTTCCTTCTGATCCAACTTAAAATTTGGAAGAAAGAGAAGCTTTGATCAACATGTACTGCTTTCTTTCCGCTTTTAGCCATTTCAATTCGATACTGTGTGCTTACACTATGATTTTTAAAAGGATCCTATTCTTGTGCTTTGAAATTTTGATCTTTAAGGCCTTATTCTTTCATCTTTTTAAAAATAAGTTCAGATTAGGGCCAAGACATTCAAATAATTTCAGGTTAAGTTCATGTAAGGGCTACACAAATCTAGTCAAAAATTTGGATTGAGGAGAAATTTCTCTAGGAATTGTGATATGGGCAATGGGCAATGGGCAATGGGGCTATAGGGGTCTCAATTACAGAAAATTTCAATTTATTGCTATTTCCGGGAAACATTTACTGCAACAAATCAATCTTATTTATATTAGCTAGAGAAATCACGTTAAAGGATGAGTATTGCTTAATATCGTGCTGATTCATTGTCTTGTGATGTACTGCAGTTAGTGGAACTGAAAGAAGCAGAACAACAATCTTTGAAAGAGTCTGAAAGATTAGAAAAAGAAATAGCAGATGTCCAGGAATTGAAGGTAAGACCTGCGCTTTGTATCCTTTGAATATCTAGCTAGTTGTTGTAGGTTATCATTTCTTTCTGTGAACTAAGTTATATTGGATTATCTTCAGAAAAAACTAAGCACCATGACTGCGGATGAGTACTTTGAGAAGCATCCAGAGCTGAGGAAGAAGTTTGATGATGAAATTCGTAATGATTACTGGGGTTATTAAAGTTGTGCTGATTCTGCAATCTGCTGCTTAGGATGAACATGTTGAGATCATGGTGTTTGATCTATAATTAGCATAATAAAATAACTAATATTTGCTTTTTTTGGCAATTTTGTTCGGCCATGTGAAGCATTTCTTTCCCGATGTTCTTGTAATTAGTCCGTGAGGTGTTTGCAAGATGCCTTGGTATGAAAGGCCGAGCACATTTGTCTATCTGAATGGCTGAATATCATTTTGGAAGTATTTTTTGAGAACATTTGTCTACCTGTTGTGCACTTGTGCATGTTTCTGAAGTTTTATGTTGATTTTAATCAAGTACTGCATTTATAGTTTCCATTACGAGGCGAATCCTGCGTGGGTAAGTTTTCATTTTGACGGAAG

mRNA sequence

GCTGAGAGCCATCTTAAAAGTTACTCGAACCACAGCCTTAACCAAGAACCGAAGGAAAGATAAAGAGAGCCGAAAAAAGGGTTTCCCTGGCCCAACAACCACAACATTATCACAGTTGCCAATTGCCATCCCCAATTCCATTTTGCCCCATTTTTGTTGCGAAAAAGTATCAGAGGAGAGAGAAAGAGAGAAAAAATGAGTGGAGTTGTGAAGAAGGTTGCGGATGCGAGCTTCAAGGCTTCGAGGAACATCGATTGGGAAGGCATGGCTAAGCTCCTTGTCTCCGATGAAGCTCGCAAGGAGTTCTTCACCCTTCGTCGCACTTTTGATGAAGTCAACACTCAACTTCAGACCAAGTTTAGCCAGGAACCTGAGCCCATAGACTGGGAGTATTACAGAAAAGGAATTGGCAACAAAGTGGTTGATATGTACAAGGAAGCTTATGATGGTGTTGTGGTTCCAAAGTATGTGGACAACGTTACACCAGAGTACAAGCCAAAATTTGAAGCCCTGTTAGTGGAACTGAAAGAAGCAGAACAACAATCTTTGAAAGAGTCTGAAAGATTAGAAAAAGAAATAGCAGATGTCCAGGAATTGAAGAAAAAACTAAGCACCATGACTGCGGATGAGTACTTTGAGAAGCATCCAGAGCTGAGGAAGAAGTTTGATGATGAAATTCGTAATGATTACTGGGGTTATTAAAGTTGTGCTGATTCTGCAATCTGCTGCTTAGGATGAACATGTTGAGATCATGGTGTTTGATCTATAATTAGCATAATAAAATAACTAATATTTGCTTTTTTTGGCAATTTTGTTCGGCCATGTGAAGCATTTCTTTCCCGATGTTCTTGTAATTAGTCCGTGAGGTGTTTGCAAGATGCCTTGGTATGAAAGGCCGAGCACATTTGTCTATCTGAATGGCTGAATATCATTTTGGAAGTATTTTTTGAGAACATTTGTCTACCTGTTGTGCACTTGTGCATGTTTCTGAAGTTTTATGTTGATTTTAATCAAGTACTGCATTTATAGTTTCCATTACGAGGCGAATCCTGCGTGGGTAAGTTTTCATTTTGACGGAAG

Coding sequence (CDS)

ATGAGTGGAGTTGTGAAGAAGGTTGCGGATGCGAGCTTCAAGGCTTCGAGGAACATCGATTGGGAAGGCATGGCTAAGCTCCTTGTCTCCGATGAAGCTCGCAAGGAGTTCTTCACCCTTCGTCGCACTTTTGATGAAGTCAACACTCAACTTCAGACCAAGTTTAGCCAGGAACCTGAGCCCATAGACTGGGAGTATTACAGAAAAGGAATTGGCAACAAAGTGGTTGATATGTACAAGGAAGCTTATGATGGTGTTGTGGTTCCAAAGTATGTGGACAACGTTACACCAGAGTACAAGCCAAAATTTGAAGCCCTGTTAGTGGAACTGAAAGAAGCAGAACAACAATCTTTGAAAGAGTCTGAAAGATTAGAAAAAGAAATAGCAGATGTCCAGGAATTGAAGAAAAAACTAAGCACCATGACTGCGGATGAGTACTTTGAGAAGCATCCAGAGCTGAGGAAGAAGTTTGATGATGAAATTCGTAATGATTACTGGGGTTATTAA

Protein sequence

MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPEPIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKESERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Spo07720.1	Spo07720.1	mRNA

Homology

[Close]

BLAST of Spo07720.1 vs. NCBI nr
Match: gi|902198696|gb|KNA13768.1| (hypothetical protein SOVF_113160 [Spinacia oleracea])

HSP 1 Score: 331.6 bits (849), Expect = 7.700e-88
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


		  
Query: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60
           MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE
Sbjct: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120
           PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE
Sbjct: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120

Query: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Spo07720.1 vs. NCBI nr
Match: gi|731371373|ref|XP_010666023.1| (PREDICTED: ATP synthase subunit d, mitochondrial [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 310.8 bits (795), Expect = 1.400e-81
Identity = 154/168 (91.67%), Postives = 162/168 (96.43%), Query Frame = 1


		  
Query: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60
           MSGV KK+AD +FKAS+NIDWEGMAKLLV++EARKEFFTLRRTFDEVN+QLQTKFSQEPE
Sbjct: 1   MSGVAKKIADVTFKASKNIDWEGMAKLLVTEEARKEFFTLRRTFDEVNSQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120
           PIDWEYYRKGIGNK+VDMYKEAYD V +PKYVD VTPEYKPK EALLVELKEAEQQSLKE
Sbjct: 61  PIDWEYYRKGIGNKLVDMYKEAYDAVEIPKYVDTVTPEYKPKIEALLVELKEAEQQSLKE 120

Query: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Spo07720.1 vs. NCBI nr
Match: gi|661887145|emb|CDP08925.1| (unnamed protein product [Coffea canephora])

HSP 1 Score: 298.1 bits (762), Expect = 9.500e-78
Identity = 147/168 (87.50%), Postives = 159/168 (94.64%), Query Frame = 1


		  
Query: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60
           MSGV KK+AD +FKA + IDWEGMAKL+VSDEARKEF  LRRTFDEVN+QLQTKFSQEPE
Sbjct: 1   MSGVAKKIADVTFKAGKTIDWEGMAKLVVSDEARKEFANLRRTFDEVNSQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120
           PIDWE+YRKGIG+K+VDMYKEAY+ V +PKYVD VTPEYKPKF+ALLVELKEAEQQSLKE
Sbjct: 61  PIDWEFYRKGIGSKLVDMYKEAYESVEIPKYVDTVTPEYKPKFDALLVELKEAEQQSLKE 120

Query: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIA+VQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIAEVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Spo07720.1 vs. NCBI nr
Match: gi|1021037811|gb|KZM95594.1| (hypothetical protein DCAR_018836 [Daucus carota subsp. sativus])

HSP 1 Score: 294.3 bits (752), Expect = 1.400e-76
Identity = 144/168 (85.71%), Postives = 158/168 (94.05%), Query Frame = 1


		  
Query: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60
           MSG VKKV D +FKAS++IDW+GMAK+LVSDEARKEFF+LRR FDEVNT LQTKFSQEPE
Sbjct: 1   MSGPVKKVTDIAFKASKSIDWDGMAKMLVSDEARKEFFSLRRAFDEVNTTLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120
           P+DWEYYRKGIG+++VDMYKEAYD V +PKYVD VTPEY+PKF+ LLVELKEAEQQSLKE
Sbjct: 61  PVDWEYYRKGIGSRLVDMYKEAYDSVEIPKYVDEVTPEYRPKFDKLLVELKEAEQQSLKE 120

Query: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIADVQELKKKLSTMTADEYF KHPEL+KKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIADVQELKKKLSTMTADEYFAKHPELKKKFDDEIRNDYWGY 168

[Close]

BLAST of Spo07720.1 vs. NCBI nr
Match: gi|747084885|ref|XP_011089871.1| (PREDICTED: ATP synthase subunit d, mitochondrial [Sesamum indicum])

HSP 1 Score: 293.9 bits (751), Expect = 1.800e-76
Identity = 146/168 (86.90%), Postives = 157/168 (93.45%), Query Frame = 1


		  
Query: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60
           MSG  KKV D +FKA R IDWEGMAKLLVSDEARKEF TLRR FDEVNTQLQTKFSQEPE
Sbjct: 1   MSGAGKKVVDVAFKAGRTIDWEGMAKLLVSDEARKEFATLRRAFDEVNTQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120
           PIDWEYYRKGIG+++VDMYK+AYD V +PKYVDNVTP+YKPKF+ALLVELKEAE +SLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKQAYDEVKIPKYVDNVTPQYKPKFDALLVELKEAEVKSLKE 120

Query: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIA+VQELKKKLSTMTADEYFEKHPEL+KKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIAEVQELKKKLSTMTADEYFEKHPELKKKFDDEIRNDYWGY 168

[Close]

BLAST of Spo07720.1 vs. UniProtKB/TrEMBL
Match: A0A0K9R2N3_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_113160 PE=4 SV=1)

HSP 1 Score: 331.6 bits (849), Expect = 5.400e-88
Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 1


		  
Query: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60
           MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE
Sbjct: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120
           PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE
Sbjct: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120

Query: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Spo07720.1 vs. UniProtKB/TrEMBL
Match: A0A0J8B972_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g225490 PE=4 SV=1)

HSP 1 Score: 310.8 bits (795), Expect = 9.900e-82
Identity = 154/168 (91.67%), Postives = 162/168 (96.43%), Query Frame = 1


		  
Query: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60
           MSGV KK+AD +FKAS+NIDWEGMAKLLV++EARKEFFTLRRTFDEVN+QLQTKFSQEPE
Sbjct: 1   MSGVAKKIADVTFKASKNIDWEGMAKLLVTEEARKEFFTLRRTFDEVNSQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120
           PIDWEYYRKGIGNK+VDMYKEAYD V +PKYVD VTPEYKPK EALLVELKEAEQQSLKE
Sbjct: 61  PIDWEYYRKGIGNKLVDMYKEAYDAVEIPKYVDTVTPEYKPKIEALLVELKEAEQQSLKE 120

Query: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Spo07720.1 vs. UniProtKB/TrEMBL
Match: A0A068UK59_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00028060001 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 6.600e-78
Identity = 147/168 (87.50%), Postives = 159/168 (94.64%), Query Frame = 1


		  
Query: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60
           MSGV KK+AD +FKA + IDWEGMAKL+VSDEARKEF  LRRTFDEVN+QLQTKFSQEPE
Sbjct: 1   MSGVAKKIADVTFKAGKTIDWEGMAKLVVSDEARKEFANLRRTFDEVNSQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120
           PIDWE+YRKGIG+K+VDMYKEAY+ V +PKYVD VTPEYKPKF+ALLVELKEAEQQSLKE
Sbjct: 61  PIDWEFYRKGIGSKLVDMYKEAYESVEIPKYVDTVTPEYKPKFDALLVELKEAEQQSLKE 120

Query: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIA+VQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIAEVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 168

[Close]

BLAST of Spo07720.1 vs. UniProtKB/TrEMBL
Match: A0A164ZA83_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_018836 PE=4 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 9.600e-77
Identity = 144/168 (85.71%), Postives = 158/168 (94.05%), Query Frame = 1


		  
Query: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60
           MSG VKKV D +FKAS++IDW+GMAK+LVSDEARKEFF+LRR FDEVNT LQTKFSQEPE
Sbjct: 1   MSGPVKKVTDIAFKASKSIDWDGMAKMLVSDEARKEFFSLRRAFDEVNTTLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120
           P+DWEYYRKGIG+++VDMYKEAYD V +PKYVD VTPEY+PKF+ LLVELKEAEQQSLKE
Sbjct: 61  PVDWEYYRKGIGSRLVDMYKEAYDSVEIPKYVDEVTPEYRPKFDKLLVELKEAEQQSLKE 120

Query: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIADVQELKKKLSTMTADEYF KHPEL+KKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIADVQELKKKLSTMTADEYFAKHPELKKKFDDEIRNDYWGY 168

[Close]

BLAST of Spo07720.1 vs. UniProtKB/TrEMBL
Match: A0A022R7I2_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a015100mg PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.100e-76
Identity = 145/168 (86.31%), Postives = 157/168 (93.45%), Query Frame = 1


		  
Query: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60
           MSGV KKV D +FKA R IDW+GMAKL+VSDEARKEF TLRR FDEVNTQLQTKFSQEPE
Sbjct: 1   MSGVGKKVVDVAFKAGRTIDWDGMAKLMVSDEARKEFSTLRRAFDEVNTQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120
           PIDWEYYRKGIG+++VDMYK+AYD V +P+YVDNVTP+YKPKF+ALLVELKEAEQ SLKE
Sbjct: 61  PIDWEYYRKGIGSRLVDMYKKAYDEVKIPQYVDNVTPQYKPKFDALLVELKEAEQMSLKE 120

Query: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIADVQELKKKLSTMTADEYF KHPEL+KKFDDEIRNDYWGY
Sbjct: 121 SERLEKEIADVQELKKKLSTMTADEYFAKHPELKKKFDDEIRNDYWGY 168

[Close]

BLAST of Spo07720.1 vs. ExPASy Swiss-Prot
Match: ATP5H_ARATH (ATP synthase subunit d, mitochondrial OS=Arabidopsis thaliana GN=At3g52300 PE=1 SV=3)

HSP 1 Score: 283.1 bits (723), Expect = 2.000e-75
Identity = 139/168 (82.74%), Postives = 153/168 (91.07%), Query Frame = 1


		  
Query: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60
           MSG  KK+AD +FKASR IDW+GMAK+LV+DEAR+EF  LRR FDEVNTQLQTKFSQEPE
Sbjct: 1   MSGAGKKIADVAFKASRTIDWDGMAKVLVTDEARREFSNLRRAFDEVNTQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120
           PIDW+YYRKGIG  +VD YKEAYD + +PKYVD VTPEYKPKF+ALLVELKEAEQ+SLKE
Sbjct: 61  PIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKE 120

Query: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIADVQE+ KKLSTMTADEYFEKHPEL+KKFDDEIRND WGY
Sbjct: 121 SERLEKEIADVQEISKKLSTMTADEYFEKHPELKKKFDDEIRNDNWGY 168

[Close]

BLAST of Spo07720.1 vs. TAIR (Arabidopsis)
Match: AT3G52300.1 (ATP synthase D chain, mitochondrial)

HSP 1 Score: 283.1 bits (723), Expect = 1.100e-76
Identity = 139/168 (82.74%), Postives = 153/168 (91.07%), Query Frame = 1


		  
Query: 1   MSGVVKKVADASFKASRNIDWEGMAKLLVSDEARKEFFTLRRTFDEVNTQLQTKFSQEPE 60
           MSG  KK+AD +FKASR IDW+GMAK+LV+DEAR+EF  LRR FDEVNTQLQTKFSQEPE
Sbjct: 1   MSGAGKKIADVAFKASRTIDWDGMAKVLVTDEARREFSNLRRAFDEVNTQLQTKFSQEPE 60

Query: 61  PIDWEYYRKGIGNKVVDMYKEAYDGVVVPKYVDNVTPEYKPKFEALLVELKEAEQQSLKE 120
           PIDW+YYRKGIG  +VD YKEAYD + +PKYVD VTPEYKPKF+ALLVELKEAEQ+SLKE
Sbjct: 61  PIDWDYYRKGIGAGIVDKYKEAYDSIEIPKYVDKVTPEYKPKFDALLVELKEAEQKSLKE 120

Query: 121 SERLEKEIADVQELKKKLSTMTADEYFEKHPELRKKFDDEIRNDYWGY 169
           SERLEKEIADVQE+ KKLSTMTADEYFEKHPEL+KKFDDEIRND WGY
Sbjct: 121 SERLEKEIADVQEISKKLSTMTADEYFEKHPELKKKFDDEIRNDNWGY 168

The following BLAST results are available for this feature:

BLAST of Spo07720.1 vs. NCBI nr
BLAST of Spo07720.1 vs. UniProtKB/TrEMBL
BLAST of Spo07720.1 vs. ExPASy Swiss-Prot
BLAST of Spo07720.1 vs. TAIR (Arabidopsis)

BLAST of Spo07720.1 vs. NCBI nr
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. NCBI nr)
Total hits: 5


Match Name	E-value	Identity	Description
gi\|902198696\|gb\|KNA13768.1\|	7.7e-88	100.	hypothetical protein SOVF_1131...	[more]
gi\|731371373\|ref\|XP_010666023.1\|	1.4e-81	91.6	PREDICTED: ATP synthase subuni...	[more]
gi\|661887145\|emb\|CDP08925.1\|	9.5e-78	87.5	unnamed protein product [Coffe...	[more]
gi\|1021037811\|gb\|KZM95594.1\|	1.4e-76	85.7	hypothetical protein DCAR_0188...	[more]
gi\|747084885\|ref\|XP_011089871.1\|	1.8e-76	86.9	PREDICTED: ATP synthase subuni...	[more]

BLAST of Spo07720.1 vs. UniProtKB/TrEMBL
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. UniprotKB/TrEMBL)
Total hits: 5


Match Name	E-value	Identity	Description
A0A0K9R2N3_SPIOL	5.4e-88	100.	Uncharacterized protein OS=Spi...	[more]
A0A0J8B972_BETVU	9.9e-82	91.6	Uncharacterized protein OS=Bet...	[more]
A0A068UK59_COFCA	6.6e-78	87.5	Uncharacterized protein OS=Cof...	[more]
A0A164ZA83_DAUCA	9.6e-77	85.7	Uncharacterized protein OS=Dau...	[more]
A0A022R7I2_ERYGU	2.1e-76	86.3	Uncharacterized protein OS=Ery...	[more]

BLAST of Spo07720.1 vs. ExPASy Swiss-Prot
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. ExPASy SwissProt)
Total hits: 1


Match Name	E-value	Identity	Description
ATP5H_ARATH	2.0e-75	82.7	ATP synthase subunit d, mitoch...	[more]

BLAST of Spo07720.1 vs. TAIR (Arabidopsis)
Analysis Date: 2018-06-29 (blastp Spinacia oleracea peptides vs. TAIR)
Total hits: 1


Match Name	E-value	Identity	Description
AT3G52300.1	1.1e-76	82.7	ATP synthase D chain, mitochon...	[more]

InterPro

Analysis Name: InterPro Annotations of S. oleracea
Date Performed: 2018-06-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008689	ATPase, F0 complex, subunit D, mitochondrial	PIR	PIRSF005514	Mitoh_ATP-synt_D	coord: 9..168 score: 2.4
IPR008689	ATPase, F0 complex, subunit D, mitochondrial	PANTHER	PTHR12700	FAMILY NOT NAMED	coord: 2..168 score: 3.5
IPR008689	ATPase, F0 complex, subunit D, mitochondrial	unknown	SSF161065	ATP synthase D chain-like	coord: 15..132 score: 2.09
None	No IPR available	PRODOM	PD968187		coord: 17..168 score: 6.0
None	No IPR available	unknown	Coil	Coil	coord: 107..144 scor
None	No IPR available	PFAM	PF05873	Mt_ATP-synt_D	coord: 15..166 score: 5.4

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
biological_process	GO:0006833	water transport
biological_process	GO:0006351	transcription, DNA-templated
biological_process	GO:0009266	response to temperature stimulus
biological_process	GO:0000398	mRNA splicing, via spliceosome
biological_process	GO:0006425	glutaminyl-tRNA aminoacylation
biological_process	GO:0055114	oxidation-reduction process
biological_process	GO:0009069	serine family amino acid metabolic process
biological_process	GO:0009853	photorespiration
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0016070	RNA metabolic process
biological_process	GO:0009813	flavonoid biosynthetic process
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0019932	second-messenger-mediated signaling
biological_process	GO:0007010	cytoskeleton organization
biological_process	GO:0006000	fructose metabolic process
biological_process	GO:0009298	GDP-mannose biosynthetic process
biological_process	GO:0006094	gluconeogenesis
biological_process	GO:0006096	glycolytic process
biological_process	GO:0007030	Golgi organization
biological_process	GO:0006972	hyperosmotic response
biological_process	GO:0019853	L-ascorbic acid biosynthetic process
biological_process	GO:0019307	mannose biosynthetic process
biological_process	GO:0010498	proteasomal protein catabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0046686	response to cadmium ion
biological_process	GO:0009560	embryo sac egg cell differentiation
biological_process	GO:0006464	cellular protein modification process
biological_process	GO:0009987	cellular process
biological_process	GO:0031048	chromatin silencing by small RNA
biological_process	GO:0009791	post-embryonic development
biological_process	GO:0071702	organic substance transport
biological_process	GO:0009630	gravitropism
biological_process	GO:0045132	meiotic chromosome segregation
biological_process	GO:0006312	mitotic recombination
biological_process	GO:0008152	metabolic process
biological_process	GO:0007062	sister chromatid cohesion
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
biological_process	GO:0051788	response to misfolded protein
biological_process	GO:0080129	proteasome core complex assembly
biological_process	GO:0033036	macromolecule localization
biological_process	GO:0006913	nucleocytoplasmic transport
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0022626	cytosolic ribosome
cellular_component	GO:0005774	vacuolar membrane
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component	GO:0005681	spliceosomal complex
cellular_component	GO:0005667	transcription factor complex
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005829	cytosol
cellular_component	GO:0019013	viral nucleocapsid
cellular_component	GO:0055029	nuclear DNA-directed RNA polymerase complex
molecular_function	GO:0004615	phosphomannomutase activity
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003899	DNA-directed 5'-3' RNA polymerase activity
molecular_function	GO:0005507	copper ion binding
molecular_function	GO:0016787	hydrolase activity
molecular_function	GO:0015078	proton transmembrane transporter activity
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005488	binding
molecular_function	GO:0019905	syntaxin binding
molecular_function	GO:0000166	nucleotide binding
molecular_function	GO:0010283	pinoresinol reductase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004819	glutamine-tRNA ligase activity
molecular_function	GO:0020037	heme binding
molecular_function	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function	GO:0004672	protein kinase activity
molecular_function	GO:0047526	2'-hydroxyisoflavone reductase activity
molecular_function	GO:0000049	tRNA binding

RNA-Seq Expression

Co-expression


Gene	r value	Expression
Spo08968	0.70	Barchart \| Table
Spo03735	0.70	Barchart \| Table
Spo10935	0.69	Barchart \| Table
Spo30027	0.69	Barchart \| Table
Spo01507	0.69	Barchart \| Table
Spo00391	0.68	Barchart \| Table
Spo24594	0.68	Barchart \| Table
Spo26870	0.68	Barchart \| Table
Spo07694	0.68	Barchart \| Table
Spo22970	0.68	Barchart \| Table
Spo10072	0.67	Barchart \| Table
Spo13514	0.67	Barchart \| Table
Spo13191	0.67	Barchart \| Table
Spo05484	0.67	Barchart \| Table
Spo06897	0.67	Barchart \| Table
Spo22458	0.67	Barchart \| Table
Spo00137	0.66	Barchart \| Table
Spo00579	0.66	Barchart \| Table
Spo01048	0.66	Barchart \| Table
Spo01375	0.66	Barchart \| Table
Spo17235	0.66	Barchart \| Table
Spo23889	0.66	Barchart \| Table
Spo17123	0.65	Barchart \| Table
Spo03002	0.65	Barchart \| Table
Spo10550	0.65	Barchart \| Table
Spo09260	0.65	Barchart \| Table
Spo00783	0.65	Barchart \| Table
Spo06521	0.65	Barchart \| Table
Spo24600	0.65	Barchart \| Table
Spo25422	0.65	Barchart \| Table
Spo11329	0.65	Barchart \| Table
Spo15003	0.65	Barchart \| Table